View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18852_low_24 (Length: 315)
Name: NF18852_low_24
Description: NF18852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18852_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 11 - 299
Target Start/End: Complemental strand, 30054626 - 30054338
Alignment:
| Q |
11 |
cacagatactagaaccttccaaattcaaacatatgaagcaaatcgcagcaattcnnnnnnntcaaggaattcaaattcaaacactatacttattcaaaaa |
110 |
Q |
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| T |
30054626 |
cacagatactagaaccttccaaattcaaacatatgaagcaaatcacagcaattcaacaaaatcaaggaattcaaattcaaacactatacttattcaaaaa |
30054527 |
T |
|
| Q |
111 |
ctcgatgaataacagatcaaacaaattgtagctagtagctactactaatattgtcaaatcaatcactgcagtgaatatcaattcaaactatacaaatatt |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
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| T |
30054526 |
ctcgatgaataacagatcaaacaaattgtagctagtagctactactaatattgtcaaatcaatcactacagtgaatatcaattcaaactatacaaacatt |
30054427 |
T |
|
| Q |
211 |
gattagatctgttcataagtatccacaaagaactactagaattaatccactacagtgaattgtaattatacacattaactggatctata |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30054426 |
gattagatctgttcataagtatccacaaagaactactagaattaatccactacagtgaattgtaattatacacattaactggatctata |
30054338 |
T |
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