View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18856_high_30 (Length: 260)
Name: NF18856_high_30
Description: NF18856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18856_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 35866286 - 35866527
Alignment:
| Q |
1 |
tgtcttcctcgatggaacctcgttctttatttggtatagttatttcgtttctcctatcaaaaagataacacacaagtcaaattgctttaaaagtgactaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35866286 |
tgtcttcctcgatggaacctcgttctttatttggtatagttatttcgtttctcctatcaaaaagataacacacaagtcaaattgctttaaaagtgactaa |
35866385 |
T |
|
| Q |
101 |
tattgcaataagttactattctgcttaagttatttaactatccaaagtttcaaacaagctcttactgtgttcaacatgtgttttttagtgcctaatgact |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35866386 |
tattgcaataagttactattctgcttaacttatttaactatccaaagtttcaaacaagctcttactgtgttcaacatgtgttttttagtgcctaatgact |
35866485 |
T |
|
| Q |
201 |
tttctatagtatagaaagtggaacttactcgtaattaacatt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
35866486 |
tttctatagtatagaaagtggaacttactcgtaattaacatt |
35866527 |
T |
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