View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18856_high_32 (Length: 250)
Name: NF18856_high_32
Description: NF18856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18856_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 14856279 - 14856514
Alignment:
| Q |
1 |
aatatttaagtcatatatatgtgtgtataatatatggtggaatattttgctaacaaaagaagaagaaaatcatcatgatattaaaaattactaatttaac |
100 |
Q |
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| T |
14856279 |
aatatttaagtcatat--atgtgtgtataatatatggtggaatattttgctaacaaaagaagaagaaaatcatcatgatattaaaaattactaatttaac |
14856376 |
T |
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| Q |
101 |
attttatgaggatgaaatattggtcacaatcgaagccgacataattcaaacaaagcataaccacacatgcaaacaagtaaaatctatgaataaactaacc |
200 |
Q |
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| T |
14856377 |
attttatgaggatgaaatattggtcacaatcgaagccgacataattcaaacaaagcataaccacacatgcaaacaagtaaaatctatgaataaactaacc |
14856476 |
T |
|
| Q |
201 |
ttttcccatagtatcaattgcaatttgtgccattttca |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
14856477 |
ttttcccatagtatcaattgcaatttgtgccattttca |
14856514 |
T |
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