View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18856_low_16 (Length: 402)

Name: NF18856_low_16
Description: NF18856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18856_low_16
NF18856_low_16
[»] chr4 (36 HSPs)
chr4 (144-402)||(21444322-21444581)
chr4 (18-136)||(6271699-6271817)
chr4 (18-140)||(35682159-35682281)
chr4 (18-134)||(23444292-23444408)
chr4 (18-136)||(51265442-51265560)
chr4 (46-136)||(30861825-30861915)
chr4 (33-140)||(26186054-26186159)
chr4 (18-114)||(47661861-47661957)
chr4 (71-140)||(42375086-42375155)
chr4 (31-109)||(40789203-40789281)
chr4 (33-107)||(42375036-42375110)
chr4 (33-106)||(55090034-55090107)
chr4 (82-138)||(30709987-30710043)
chr4 (33-107)||(47404623-47404697)
chr4 (68-137)||(3862619-3862688)
chr4 (68-137)||(3871376-3871445)
chr4 (71-140)||(6271778-6271847)
chr4 (71-140)||(47661918-47661987)
chr4 (71-145)||(23444257-23444331)
chr4 (21-95)||(52028587-52028661)
chr4 (71-140)||(51265521-51265590)
chr4 (18-107)||(53954636-53954725)
chr4 (32-140)||(44379923-44380031)
chr4 (21-114)||(50384131-50384216)
chr4 (71-130)||(35682242-35682301)
chr4 (71-140)||(53954686-53954755)
chr4 (82-142)||(5048887-5048947)
chr4 (87-143)||(19184493-19184549)
chr4 (32-84)||(28693960-28694012)
chr4 (107-145)||(24006165-24006203)
chr4 (82-140)||(43063511-43063569)
chr4 (18-95)||(38714861-38714938)
chr4 (71-107)||(26186042-26186078)
chr4 (107-143)||(28693922-28693958)
chr4 (71-107)||(47404611-47404647)
chr4 (46-134)||(47762607-47762695)
[»] chr8 (26 HSPs)
chr8 (18-145)||(5667085-5667212)
chr8 (18-136)||(10086754-10086872)
chr8 (33-136)||(8243426-8243529)
chr8 (33-143)||(34229631-34229741)
chr8 (18-136)||(35440992-35441110)
chr8 (18-136)||(5033158-5033276)
chr8 (18-144)||(8796411-8796537)
chr8 (60-145)||(43844534-43844619)
chr8 (18-136)||(33841614-33841732)
chr8 (34-136)||(45191166-45191268)
chr8 (71-136)||(5667173-5667238)
chr8 (53-143)||(4958590-4958679)
chr8 (71-140)||(5033237-5033306)
chr8 (71-140)||(33841584-33841653)
chr8 (71-140)||(35440962-35441031)
chr8 (53-95)||(6296643-6296685)
chr8 (63-136)||(2581822-2581895)
chr8 (18-107)||(39850981-39851070)
chr8 (71-143)||(6296681-6296753)
chr8 (74-137)||(45191123-45191186)
chr8 (70-136)||(22649842-22649908)
chr8 (71-144)||(39851031-39851104)
chr8 (71-141)||(8796498-8796568)
chr8 (71-129)||(10086833-10086891)
chr8 (79-140)||(1880232-1880292)
chr8 (99-140)||(4958702-4958743)
[»] scaffold0586 (2 HSPs)
scaffold0586 (18-145)||(7070-7196)
scaffold0586 (71-130)||(7050-7109)
[»] chr3 (26 HSPs)
chr3 (33-136)||(51046111-51046214)
chr3 (35-140)||(30734442-30734547)
chr3 (21-143)||(33689166-33689288)
chr3 (18-136)||(41752961-41753079)
chr3 (18-134)||(47492070-47492186)
chr3 (33-143)||(55223222-55223332)
chr3 (21-106)||(30476500-30476585)
chr3 (33-134)||(43139747-43139848)
chr3 (33-143)||(18321641-18321751)
chr3 (18-107)||(1801469-1801558)
chr3 (32-129)||(30580793-30580890)
chr3 (71-140)||(45103102-45103171)
chr3 (71-137)||(1801442-1801508)
chr3 (35-107)||(47677295-47677367)
chr3 (71-142)||(50524778-50524849)
chr3 (33-107)||(29031752-29031826)
chr3 (71-137)||(41753040-41753106)
chr3 (33-107)||(49418729-49418803)
chr3 (18-95)||(50524740-50524817)
chr3 (71-145)||(30734390-30734464)
chr3 (48-110)||(50549998-50550060)
chr3 (71-140)||(51046066-51046135)
chr3 (53-127)||(39057017-39057089)
chr3 (71-114)||(47492066-47492109)
chr3 (103-140)||(1272557-1272594)
chr3 (71-140)||(21024088-21024156)
[»] chr7 (25 HSPs)
chr7 (18-136)||(11016866-11016984)
chr7 (19-136)||(34854719-34854836)
chr7 (40-136)||(38975802-38975898)
chr7 (18-136)||(4290542-4290660)
chr7 (21-136)||(41018254-41018369)
chr7 (33-145)||(41945843-41945955)
chr7 (52-136)||(45231907-45231991)
chr7 (21-107)||(7671937-7672023)
chr7 (18-136)||(15027539-15027657)
chr7 (33-131)||(27028831-27028929)
chr7 (19-107)||(29053338-29053426)
chr7 (71-140)||(4290621-4290690)
chr7 (71-140)||(11016945-11017014)
chr7 (71-140)||(42628371-42628440)
chr7 (18-95)||(48000775-48000852)
chr7 (68-140)||(27028721-27028793)
chr7 (48-114)||(22764753-22764819)
chr7 (46-144)||(30217505-30217602)
chr7 (71-136)||(48000691-48000756)
chr7 (71-137)||(38975881-38975947)
chr7 (18-95)||(42628333-42628410)
chr7 (71-143)||(41945931-41946003)
chr7 (19-107)||(4649346-4649436)
chr7 (53-106)||(10419485-10419538)
chr7 (85-137)||(48000827-48000879)
[»] chr1 (50 HSPs)
chr1 (18-136)||(5995366-5995484)
chr1 (21-136)||(37155043-37155158)
chr1 (18-140)||(32540771-32540893)
chr1 (32-136)||(29179634-29179738)
chr1 (18-136)||(48993940-48994058)
chr1 (32-143)||(17127601-17127712)
chr1 (21-134)||(44706809-44706923)
chr1 (19-136)||(48498412-48498529)
chr1 (33-137)||(1091582-1091686)
chr1 (71-138)||(33219649-33219716)
chr1 (46-144)||(36290458-36290556)
chr1 (33-137)||(9157306-9157410)
chr1 (32-107)||(741539-741614)
chr1 (33-143)||(4608986-4609096)
chr1 (57-143)||(21630032-21630118)
chr1 (33-95)||(47303433-47303495)
chr1 (71-140)||(48993910-48993979)
chr1 (31-95)||(46333982-46334046)
chr1 (32-107)||(29371394-29371469)
chr1 (32-107)||(34062235-34062310)
chr1 (71-137)||(5995445-5995511)
chr1 (18-107)||(15220837-15220926)
chr1 (71-140)||(49444906-49444975)
chr1 (19-95)||(8337875-8337951)
chr1 (71-143)||(29371444-29371516)
chr1 (69-136)||(46931994-46932061)
chr1 (62-140)||(28395630-28395708)
chr1 (33-143)||(45728277-45728387)
chr1 (71-140)||(15220887-15220956)
chr1 (71-140)||(29179590-29179659)
chr1 (33-105)||(33219601-33219673)
chr1 (33-107)||(49444951-49445023)
chr1 (71-136)||(17127561-17127626)
chr1 (31-95)||(38674541-38674603)
chr1 (33-106)||(48604985-48605058)
chr1 (19-107)||(5694914-5695001)
chr1 (72-143)||(12441032-12441103)
chr1 (71-126)||(32540755-32540810)
chr1 (82-137)||(36381588-36381643)
chr1 (106-145)||(46333943-46333982)
chr1 (33-79)||(1819527-1819573)
chr1 (82-140)||(6539666-6539724)
chr1 (82-140)||(9884834-9884892)
chr1 (107-145)||(44183438-44183476)
chr1 (32-144)||(19711217-19711327)
chr1 (82-143)||(31342253-31342314)
chr1 (71-104)||(45728363-45728396)
chr1 (71-107)||(4609072-4609108)
chr1 (19-75)||(28928803-28928859)
chr1 (85-137)||(46932072-46932123)
[»] chr6 (16 HSPs)
chr6 (18-143)||(17750893-17751017)
chr6 (33-134)||(551203-551304)
chr6 (18-107)||(12343126-12343215)
chr6 (36-140)||(24587454-24587558)
chr6 (19-106)||(10521873-10521960)
chr6 (74-140)||(24618594-24618660)
chr6 (71-136)||(24975749-24975814)
chr6 (49-107)||(31654331-31654389)
chr6 (71-140)||(7384481-7384550)
chr6 (18-110)||(13043480-13043572)
chr6 (33-95)||(24618639-24618701)
chr6 (33-94)||(2315342-2315403)
chr6 (71-140)||(17750978-17751047)
chr6 (106-146)||(10521845-10521885)
chr6 (71-127)||(12343176-12343232)
chr6 (71-140)||(13043533-13043602)
[»] chr2 (28 HSPs)
chr2 (18-136)||(16514421-16514539)
chr2 (18-136)||(29508713-29508832)
chr2 (31-116)||(6721968-6722053)
chr2 (18-140)||(14229376-14229488)
chr2 (18-116)||(14470615-14470713)
chr2 (18-107)||(6217247-6217336)
chr2 (21-107)||(2828610-2828696)
chr2 (18-95)||(38933625-38933702)
chr2 (71-131)||(14229355-14229415)
chr2 (22-114)||(15011299-15011391)
chr2 (84-147)||(14892349-14892412)
chr2 (74-144)||(32545867-32545937)
chr2 (71-140)||(16514500-16514569)
chr2 (32-93)||(37961746-37961807)
chr2 (71-140)||(38933663-38933732)
chr2 (71-135)||(6217222-6217286)
chr2 (18-146)||(32545773-32545903)
chr2 (71-129)||(33018621-33018679)
chr2 (32-110)||(37762038-37762116)
chr2 (71-140)||(6722027-6722096)
chr2 (71-143)||(14470582-14470654)
chr2 (33-107)||(2893989-2894063)
chr2 (33-143)||(24115910-24116020)
chr2 (58-131)||(9173044-9173117)
chr2 (18-107)||(29925593-29925682)
chr2 (71-137)||(24115996-24116062)
chr2 (99-136)||(37632988-37633025)
chr2 (70-110)||(565332-565372)
[»] chr5 (34 HSPs)
chr5 (33-143)||(16439128-16439238)
chr5 (18-136)||(19655155-19655273)
chr5 (33-144)||(3180098-3180208)
chr5 (18-114)||(29699386-29699482)
chr5 (33-136)||(291094-291197)
chr5 (32-134)||(30117865-30117967)
chr5 (48-136)||(19598329-19598417)
chr5 (71-140)||(2093930-2093999)
chr5 (71-140)||(2953266-2953335)
chr5 (33-140)||(12913796-12913903)
chr5 (71-145)||(16971220-16971294)
chr5 (18-107)||(3899865-3899954)
chr5 (18-107)||(16971170-16971259)
chr5 (71-140)||(29699443-29699512)
chr5 (71-130)||(12913879-12913938)
chr5 (71-140)||(291173-291242)
chr5 (71-140)||(3899915-3899984)
chr5 (18-107)||(28818943-28819032)
chr5 (76-140)||(13312257-13312321)
chr5 (74-140)||(2356351-2356416)
chr5 (18-80)||(2953243-2953305)
chr5 (71-137)||(19655234-19655300)
chr5 (18-109)||(2356298-2356386)
chr5 (31-95)||(38134409-38134473)
chr5 (71-134)||(28818993-28819056)
chr5 (33-94)||(2093975-2094036)
chr5 (46-134)||(39031202-39031290)
chr5 (76-143)||(32485630-32485697)
chr5 (69-143)||(1638447-1638521)
chr5 (71-105)||(6912325-6912359)
chr5 (82-140)||(11983249-11983306)
chr5 (71-116)||(7009404-7009449)
chr5 (71-143)||(26662475-26662548)
chr5 (71-143)||(26934070-26934143)
[»] scaffold0161 (2 HSPs)
scaffold0161 (31-136)||(27256-27361)
scaffold0161 (71-136)||(27217-27282)
[»] scaffold0047 (1 HSPs)
scaffold0047 (21-107)||(63783-63869)
[»] scaffold0016 (2 HSPs)
scaffold0016 (71-140)||(49696-49765)
scaffold0016 (32-107)||(49740-49815)
[»] scaffold0180 (1 HSPs)
scaffold0180 (71-142)||(19113-19184)
[»] scaffold0481 (1 HSPs)
scaffold0481 (32-80)||(2924-2972)
[»] scaffold1033 (1 HSPs)
scaffold1033 (33-80)||(2266-2313)
[»] scaffold1029 (1 HSPs)
scaffold1029 (33-80)||(2266-2313)


Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 144 - 402
Target Start/End: Original strand, 21444322 - 21444581
Alignment:
Q  144 gattaaactagccataattgaagcttaaaccaatacgacgtgtatcaagtcagctcgattctaataacactggctttt-tataggttttctttgaacata 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  21444322 gattaaactagccataattgaagcttaaaccaatacgacgtgtatcaagtcagctcgattctaataacactggcttttttataggttttctttgtacata 21444421  T
Q  243 cttctcaagtacttgcggtaatagattagtgttgttataaagtaacagttctagttagtaatagaagaatgtgcatgagtgagaagattatgattaatct 342  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21444422 cttctctagtacttgtggtaatagattagtgttgttataaagtaacagttctagttagtaatagaagaatgtgcatgagtgagaagattatgattaatct 21444521  T
Q  343 aaaaaccaagtaccaatttcataatatactaaatgtaagatggtgtatatgggcgttggc 402  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21444522 aaaaaccaattaccaatttcataatatgctaaatgtaagatggtgtatatgggcgttggc 21444581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 6271817 - 6271699
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| || |||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||| ||| |     
T  6271817 attggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcaccc 6271718  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  6271717 aactctatgtcacccaagt 6271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 35682281 - 35682159
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  || |||||||||  |||||| |||||||||| ||| ||||||||| |||||||||||||||||| | |||||||||||| ||| ||    
T  35682281 attggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcaccaatatcacct 35682182  T
Q  118 aactctatgtcacccaagtgcta 140  Q
    |||||||||||||||||||||||    
T  35682181 aactctatgtcacccaagtgcta 35682159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 23444292 - 23444408
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||| |     
T  23444292 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcaccc 23444391  T
Q  118 aactctatgtcacccaa 134  Q
    |||||||||||||||||    
T  23444392 aactctatgtcacccaa 23444408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 51265560 - 51265442
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||| ||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||| |     
T  51265560 attggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcaccc 51265461  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  51265460 aactctatgtcacccaagt 51265442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 30861825 - 30861915
Alignment:
Q  46 acaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||| ||||| |||||||||||||||||||    
T  30861825 acaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaactctatgtcacccaagt 30861915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 26186054 - 26186159
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  |||||| ||||||||||||||  |||||||||||| ||| |||||||||| | ||||||| |||||| | | |||||||||||||||    
T  26186054 caatcacaatgtcacaatgcttgtgaaagagaga--aacacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctatgtcaccc 26186151  T
Q  133 aagtgcta 140  Q
    ||||||||    
T  26186152 aagtgcta 26186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 47661957 - 47661861
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtca 114  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | ||||||||||||||||    
T  47661957 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtca 47661861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 42375086 - 42375155
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| |||||||||||||||  |||||||||||||||| | |||||||||||||||||||||||    
T  42375086 cacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 42375155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 40789281 - 40789203
Alignment:
Q  31 gccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaa 109  Q
    |||||||||||||  |||||| |||||||||||||| |||||||| |||| |||||||||||||| | |||||||||||    
T  40789281 gccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcaccaa 40789203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 42375110 - 42375036
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||||| |||||||||    
T  42375110 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcacc 42375036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 55090034 - 55090107
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcac 106  Q
    |||||||||||  |||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||||    
T  55090034 caatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtcac 55090107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 30709987 - 30710043
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgc 138  Q
    |||||||||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  30709987 tgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtgc 30710043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 47404623 - 47404697
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||||  |||||| |||||||||||||| |||| |||||||| || ||||||||||||| |||||||||    
T  47404623 caatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattgtggcattgtgattgaccaatgtcacc 47404697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 3862619 - 3862688
Alignment:
Q  68 aaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    ||||||||||||| || ||||||||||| | |||||||||||||||| | |||||||||||||| |||||    
T  3862619 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacctaagtg 3862688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 3871376 - 3871445
Alignment:
Q  68 aaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    ||||||||||||| || ||||||||||| | |||||||||||||||| | |||||||||||||| |||||    
T  3871376 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacctaagtg 3871445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 6271778 - 6271847
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| |||||||||||||| | |||||||||||| |||   |||||||||||||||||||||||    
T  6271778 cacaagcattgtgacattgtgattggccaatgtcaccaatatcactcaactctatgtcacccaagtgcta 6271847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 47661918 - 47661987
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | ||||||||||||||||| |||||    
T  47661918 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaaatgcta 47661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 23444331 - 23444257
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | |||||||||| |||||| ||||| ||||    
T  23444331 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgttacccaaatgctacccga 23444257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 52028661 - 52028587
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||| || |||||||||||||  |||||| |||||||||||||| |||||||| |||| |||||| |||||||    
T  52028661 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattg 52028587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 51265521 - 51265590
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||| ||||||   |||||||||||||||| | ||||||| |||||||||||||||    
T  51265521 cacaagcattgtgacattatgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 51265590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 53954725 - 53954636
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| ||  ||||| ||||||  |||||| ||||||||||| || |||||| |||||| |||||||||||||| | |||||||||    
T  53954725 attggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatgtcacc 53954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 44380031 - 44379923
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    |||||||||||| ||||||  || | ||| ||||| |||| |||||||| ||||||| | |||| | |||||| |||||||||   |||||||||||| |    
T  44380031 ccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattgtgacattataattggccaatgtcgccaatgtcactcaactctatgtcatc 44379932  T
Q  132 caagtgcta 140  Q
    |||||||||    
T  44379931 caagtgcta 44379923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 50384131 - 50384216
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtca 114  Q
    |||||| || |||||||||||||  |||||| |||||||||||||| |||||||||        ||||||||||||| ||||||||||||||||    
T  50384131 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaag--------cattgtgattgacgaatgtcaccaatgtca 50384216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 35682242 - 35682301
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcac 130  Q
    |||||||||| |||||||||||| |   |||||||||||||||| |||||||||||||||    
T  35682242 cacaagcattgtgacattgtgatcggtcaatgtcaccaatgtcacctaactctatgtcac 35682301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 53954686 - 53954755
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||| ||||   |||||||||||||||| | |||||||||||||  ||||||||    
T  53954686 cacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactctatgtcacaaaagtgcta 53954755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 5048887 - 5048947
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatc 142  Q
    ||||||| |||||||| ||||||| |||||||| | |||||||||||| ||||||| ||||    
T  5048887 tgacattatgattgaccaatgtcatcaatgtcacccaactctatgtcatccaagtgttatc 5048947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 19184549 - 19184493
Alignment:
Q  87 ttgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    ||||||||||| ||||||| ||||||||  ||||||||| |||||||| ||||||||    
T  19184549 ttgtgattgaccaatgtcatcaatgtcacttaactctatctcacccaaatgctatcc 19184493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 28693960 - 28694012
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatga 84  Q
    |||||||||||   ||||||||||||||||||||| |||||||| ||||||||    
T  28693960 ccaatcacaatatcacaatgtttgtgaaagagagagaaacacaaacattatga 28694012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 24006165 - 24006203
Alignment:
Q  107 caatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  24006165 caatgtcacccaactctatgtcacccaagtgctatccga 24006203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 43063569 - 43063511
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||| |||||||||||||||||||| || | ||| |||||||| |||||    
T  43063569 tgacattgtggttggctaatgtcaccaatgtcatcaaattttatatcacccaaatgcta 43063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 38714938 - 38714861
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    ||||||||  ||| |||||| |||||  ||||||||||||||||| | | ||||| ||  ||||||||||||||||||    
T  38714938 attggtgatattacccaatctcaatgtcacaatgtttgtgaaagaaatagaaacataaatattatgacattgtgattg 38714861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 26186078 - 26186042
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||| |||||||||||||||| |||||||||    
T  26186078 cacaagcattgtgacattgtgattgaccaatgtcacc 26186042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 28693958 - 28693922
Alignment:
Q  107 caatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||||||| |||| |||||||||||||||||||||    
T  28693958 caatgtcatccaactttatgtcacccaagtgctatcc 28693922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 47404647 - 47404611
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||| |||||||||||||||| |||||||||    
T  47404647 cacaagcattgtgacattgtgattgaccaatgtcacc 47404611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 47762695 - 47762607
Alignment:
Q  46 acaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaa 134  Q
    |||||| |||||||||||||| ||||| || |||| | ||||||||||||   |||||||| ||| |||   | |||||||||||||||    
T  47762695 acaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcacaaatatcactcagctctatgtcacccaa 47762607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 5667212 - 5667085
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| || |||||| ||||||  | |||| |||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||     
T  5667212 attggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatgtcaccaatgtcatcc 5667113  T
Q  118 aactctatgtcacccaagtgctatccga 145  Q
    ||||||||||||||||||||||| ||||    
T  5667112 aactctatgtcacccaagtgctacccga 5667085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 10086872 - 10086754
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||||| |     
T  10086872 attggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatgtcactaatgtcaccc 10086773  T
Q  118 aactctatgtcacccaagt 136  Q
    || ||||||||||||||||    
T  10086772 aattctatgtcacccaagt 10086754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 136
Target Start/End: Original strand, 8243426 - 8243529
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||| || ||||||||||||| || ||||||||||||| | |||||||||||||||    
T  8243426 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctatgtcaccc 8243525  T
Q  133 aagt 136  Q
    ||||    
T  8243526 aagt 8243529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 34229741 - 34229631
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    ||||||||||   |||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||| |    
T  34229741 caatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattgactcatgtcactaatgtcacccaactctatgtcacac 34229642  T
Q  133 aagtgctatcc 143  Q
    |||||||||||    
T  34229641 aagtgctatcc 34229631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 35440992 - 35441110
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||| |     
T  35440992 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcaccc 35441091  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  35441092 aactctatgtcacccaagt 35441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 5033276 - 5033158
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || |||||||||||   |||||||||||||||| |     
T  5033276 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccaatgtcaccc 5033177  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  5033176 aactctatgtcacccaagt 5033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 8796537 - 8796411
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||| ||||  |||||| |||||||||| ||| ||||||||||||| |||||||||||||||| ||| |||| ||| ||| ||    
T  8796537 attggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgaccaatatcacaaatatcacct 8796438  T
Q  118 aactctatgtcacccaagtgctatccg 144  Q
    |||||||||||||||||||| ||||||    
T  8796437 aactctatgtcacccaagtgttatccg 8796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 43844534 - 43844619
Alignment:
Q  60 agagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    ||||||| ||||||||||||| |||||||||||||||  ||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  43844534 agagagagaaacacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctatgtcacccaattgctatccga 43844619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 33841614 - 33841732
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||| ||  |||||| |||||||||||||| ||||||||||||| || |||| ||||||   |||||||||||||||| |     
T  33841614 attggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatgtcaccaatgtcaccc 33841713  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  33841714 aactctatgtcacccaagt 33841732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 45191166 - 45191268
Alignment:
Q  34 aatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccca 133  Q
    ||||||||||| |||||| || ||||||||||| |||||||| |||| | ||||| ||||||   |||||||||||| ||||| ||||||||||||||||    
T  45191166 aatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattttgattggtcaatgtcaccaatatcatccaactctatgtcaccca 45191265  T
Q  134 agt 136  Q
    |||    
T  45191266 agt 45191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 5667173 - 5667238
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||||||||||    
T  5667173 cacaagcattatgacattgtaattggccaatgtcaccaatgtcatcaaactctatgtcacccaagt 5667238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 4958679 - 4958590
Alignment:
Q  53 ttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||||||||||| |||||||| ||||||||||||||||||| | ||||||| |||| ||| | || |||||||||| ||||||||||||    
T  4958679 ttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatgtcatcaatatca-caaattctatgtcacacaagtgctatcc 4958590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 5033237 - 5033306
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | |||||||||||||||||||||||    
T  5033237 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 5033306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 33841653 - 33841584
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||| ||||||||   |||||||||||||||| | |||||||||||||||||||||||    
T  33841653 cacaagcattgtgacaatgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 33841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 35441031 - 35440962
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | ||||||| |||||||||||||||    
T  35441031 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 35440962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 6296685 - 6296643
Alignment:
Q  53 ttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  6296685 ttgtgaaagagagagaaacacaagcattatgacattgtgattg 6296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 2581895 - 2581822
Alignment:
Q  63 gagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||| ||||||||||||| || ||||||||||| | ||||||| |||||||| | || ||||||||||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtcaacaatgtcacccaattctatgtcacccaagt 2581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 39851070 - 39850981
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| ||  |||||||||||  || |||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  39851070 attggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 39850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 6296681 - 6296753
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||| |||||||| |||||||| | ||||||    
T  6296681 cacaagtattgtgacattataattgactaatgtcactaatgtcatccaactctatatcacccaaatactatcc 6296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 45191186 - 45191123
Alignment:
Q  74 aagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    ||||||| || |||||||||| |  |||||||||||| ||||| ||||||||||||||||||||    
T  45191186 aagcattgtggcattgtgattaatcaatgtcaccaatatcatccaactctatgtcacccaagtg 45191123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 22649908 - 22649842
Alignment:
Q  70 acacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    ||||||||||| || ||||||||||  | ||||||||||||||||   |||||||||||||||||||    
T  22649908 acacaagcattgtggcattgtgattagccaatgtcaccaatgtcactcaactctatgtcacccaagt 22649842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 39851031 - 39851104
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccg 144  Q
    |||||||||||| | ||||||||||   ||||||||||||||||   |||| ||||||| ||||||||||||||    
T  39851031 cacaagcattataatattgtgattggtcaatgtcaccaatgtcactcaactttatgtcatccaagtgctatccg 39851104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 8796498 - 8796568
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctat 141  Q
    |||||||||| ||||||| ||||||   |||||||||||| ||| ||| ||||||||||| || |||||||    
T  8796498 cacaagcattgtgacattttgattggtcaatgtcaccaatatcacctagctctatgtcacacatgtgctat 8796568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 10086833 - 10086891
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtca 129  Q
    ||||| |||| ||||||||||||||   |||||||||||||||| | ||||||||||||    
T  10086833 cacaaacattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtca 10086891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 1880292 - 1880232
Alignment:
Q  79 ttatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||||||||||   |||||||||| ||||| | || ||||||||||||||||||||    
T  1880292 ttatgacattgtgattggtcaatgtcaccagtgtcacc-aattctatgtcacccaagtgcta 1880232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 4958702 - 4958743
Alignment:
Q  99 aatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||| ||| ||||||||||||||||||| |||||||||    
T  4958702 aatgtcactaatatcatctaactctatgtcacgcaagtgcta 4958743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 7070 - 7196
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||  ||||||||||||||||  |||||| |||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||||||| |     
T  7070 attggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtca-cc 7168  T
Q  118 aactctatgtcacccaagtgctatccga 145  Q
    ||||||||||||| |||||| |||||||    
T  7169 aactctatgtcacacaagtgttatccga 7196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 7109 - 7050
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcac 130  Q
    |||||||||| |||||||||||||| ||||| |||||||||||| | |||||||||||||    
T  7109 cacaagcattgtgacattgtgattggctaatatcaccaatgtcacccaactctatgtcac 7050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 33 - 136
Target Start/End: Original strand, 51046111 - 51046214
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||| ||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||    
T  51046111 caatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggccaatgtcaccaatgtcatccaactctatgtcaccc 51046210  T
Q  133 aagt 136  Q
    ||||    
T  51046211 aagt 51046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 30734442 - 30734547
Alignment:
Q  35 atcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaa 134  Q
    |||||||||  |||||| |||||||||| ||| ||||||||| |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  30734442 atcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaa 30734541  T
Q  135 gtgcta 140  Q
    ||||||    
T  30734542 gtgcta 30734547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 33689288 - 33689166
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaac 120  Q
    |||||| || |||||||||||||  |||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||| ||| |||||||| | |||    
T  33689288 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaac 33689189  T
Q  121 tctatgtcacccaagtgctatcc 143  Q
    |||||||||| |||||| |||||    
T  33689188 tctatgtcacacaagtgttatcc 33689166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 41753079 - 41752961
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| || |||||||||||||| |||||| |||||||||||| | |||||||| |||| || ||||||||||| | |||||||||||||||| |     
T  41753079 attggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgtcaccc 41752980  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  41752979 aactctatgtcacccaagt 41752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 47492070 - 47492186
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| || |||||||||||||  |||||| |||||||| ||||| ||||||||||||| |||||||||||||| | ||| | |||||||||| |     
T  47492070 attggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaatatgaccaatgtcaccc 47492169  T
Q  118 aactctatgtcacccaa 134  Q
    |||||||||||||||||    
T  47492170 aactctatgtcacccaa 47492186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 55223332 - 55223222
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||| ||||  |||||| |||||||||||||| ||||| ||| ||| | | |||||||||||| ||| |||||||||||| ||||||||||||||| |    
T  55223332 caatcataatgtcacaatgcttgtgaaagagagagaaacataagtattctaatattgtgattgaccaatatcaccaatgtcacctaactctatgtcacac 55223233  T
Q  133 aagtgctatcc 143  Q
    |||||||||||    
T  55223232 aagtgctatcc 55223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 30476500 - 30476585
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcac 106  Q
    |||||| || |||||||||||||  |||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  30476500 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcac 30476585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 43139747 - 43139848
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  | |||| |||||||||||||| ||||||||||||| || |||||| |||| | |||||||||||||||| | |||||||||||||||    
T  43139747 caatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcaccaatgtcacccaactctatgtcaccc 43139846  T
Q  133 aa 134  Q
    ||    
T  43139847 aa 43139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 18321751 - 18321641
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  ||||||  ||||||| ||||| |||||||| | || |||||||||||||||| |||||||||||| ||| | ||||||||||  |||    
T  18321751 caatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatgtcaccaatatcacccaactctatgttgccc 18321652  T
Q  133 aagtgctatcc 143  Q
    |||||||||||    
T  18321651 aagtgctatcc 18321641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 1801469 - 1801558
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| || |||||||||||||| |||||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  1801469 attggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 1801558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 30580793 - 30580890
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtca 129  Q
    ||||||| ||||  ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| |||||||| ||||||| | || |||||||||    
T  30580793 ccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatgtcacaaatgtcacccaattctatgtca 30580890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 45103171 - 45103102
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| |||||||||||||||  ||| |||||||||||| | |||||||||||||||||||||||    
T  45103171 cacaagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctatgtcacccaagtgcta 45103102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 1801508 - 1801442
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||| || ||||||||||| | |||||||||||||||| | ||||||||||||||||||||    
T  1801508 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtg 1801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 47677295 - 47677367
Alignment:
Q  35 atcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||  |||||| |||||||||||||| |||||||| |||| |||||||||||||||  |||||||||    
T  47677295 atcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcacc 47677367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 50524778 - 50524849
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatc 142  Q
    |||||||||  | |||||||||||||||||| ||||||||||||   |||||||||||||||||||| ||||    
T  50524778 cacaagcatcgtaacattgtgattgactaatatcaccaatgtcactcaactctatgtcacccaagtgttatc 50524849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 29031752 - 29031826
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||||  |||||| |||||||||||||| |||||||| |||| ||||||||| |||||| ||| |||||    
T  29031752 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcacc 29031826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 41753040 - 41753106
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||| || ||||||||||| | ||||||||||||||||   ||||||||||||||||||||    
T  41753040 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcactcaactctatgtcacccaagtg 41753106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 49418729 - 49418803
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||||  | ||| ||||||||||||||| ||||||||||||||||| ||| | |||||| |||||||||    
T  49418729 caatcacaatgtcataatatttgtgaaagagagagaaacacaagcattatgatattataattgaccaatgtcacc 49418803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 50524817 - 50524740
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    ||||||||  |||| ||||||||||| ||| ||| |||||||||||||| |||||||| |||| ||||||| ||||||    
T  50524817 attggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacattatgattg 50524740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 30734464 - 30734390
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    |||||||||| |||||||||||| |   ||||||| |||||||| | ||||||||||||| ||||| ||||||||    
T  30734464 cacaagcattgtgacattgtgatcggtcaatgtcatcaatgtcaccaaactctatgtcacacaagttctatccga 30734390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 50550060 - 50549998
Alignment:
Q  48 aatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaat 110  Q
    ||||||||||||||||||| ||||||||||||| | | ||||||||||   ||||||||||||    
T  50550060 aatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcaccaat 50549998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 51046135 - 51046066
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| |||| ||||||| |||||||  |||||||||||| ||||| |||||||||||| |||| |||||    
T  51046135 cacaaacattgtgacattatgattgatcaatgtcaccaatatcatccaactctatgtcatccaaatgcta 51046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 39057017 - 39057089
Alignment:
Q  53 ttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgt 127  Q
    ||||||||||||||  ||||||| |||  ||||||||| |||| |  ||||||||||||||| ||||||||||||    
T  39057017 ttgtgaaagagaga--aacacaaacatcgtgacattgtcattgtccgatgtcaccaatgtcacctaactctatgt 39057089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 47492109 - 47492066
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtca 114  Q
    |||||||||| |||||||||||||| | ||||||||||||||||    
T  47492109 cacaagcattgtgacattgtgattggccaatgtcaccaatgtca 47492066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 1272557 - 1272594
Alignment:
Q  103 tcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||||| | |||||||||||||||||||||||    
T  1272557 tcaccaatgtcacccaactctatgtcacccaagtgcta 1272594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 21024156 - 21024088
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||| ||| |||||||||| ||||| |||||||||||| ||||| || | |||||||||||| |||||    
T  21024156 cacaagaattgtgacattgtgtttgaccaatgtcaccaatatcatc-aattttatgtcacccaaatgcta 21024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 11016984 - 11016866
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  ||||||||||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||| |     
T  11016984 attggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcaccc 11016885  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  11016884 aactctatgtcacccaagt 11016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 34854719 - 34854836
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatcta 118  Q
    |||||||| || |||||||||||||| |||||| |||||||||||| | |||||||| |||| || ||||||||||||| |||||||||||||||| | |    
T  34854719 ttggtgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcaccca 34854818  T
Q  119 actctatgtcacccaagt 136  Q
    ||||||||||||||||||    
T  34854819 actctatgtcacccaagt 34854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 38975898 - 38975802
Alignment:
Q  40 aatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    ||||| |||||| |||||||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| | |||||||||||||||||||    
T  38975898 aatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctatgtcacccaagt 38975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 4290660 - 4290542
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| || |||||||||||||  |||||  |||||||||||||| |||||| |||||| || ||||||||||||| ||| |||||||| ||| |     
T  4290660 attggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattgaccaatatcaccaatatcaccc 4290561  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  4290560 aactctatgtcacccaagt 4290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 41018254 - 41018369
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaac 120  Q
    |||||| || |||||||||||||   ||||| |||||||||||||| ||||| ||||||| || |||||||||||   |||||||||||||||| | |||    
T  41018254 ggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaac 41018353  T
Q  121 tctatgtcacccaagt 136  Q
    ||||||||||||||||    
T  41018354 tctatgtcacccaagt 41018369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 41945955 - 41945843
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    ||||||||||| ||||||| |||||||||||| | |||| ||| |||||||||||| |||||||||||||||| ||||||||   || ||||||||| |     
T  41945955 caatcacaatgttacaatgcttgtgaaagagaaaaaaacgcaaacattatgacattatgattgactaatgtcatcaatgtcactcaattctatgtcatct 41945856  T
Q  133 aagtgctatccga 145  Q
    |||||||| ||||    
T  41945855 aagtgctacccga 41945843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 45231907 - 45231991
Alignment:
Q  52 tttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||| | |||||||||||||||| | |||||||||||||||||||    
T  45231907 tttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 45231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 7671937 - 7672023
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  7671937 ggtgacattagccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 7672023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 15027657 - 15027539
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| |||||||| |||| ||  ||||||||||   ||||||||||||||||       
T  15027657 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcaccaatgtcaaac 15027558  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||| ||||||||    
T  15027557 aactctatgttacccaagt 15027539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 27028831 - 27028929
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    |||||||||||  |||||| || ||||||||||| |||||||| |||| |||||||||||||||| |||||||||||  ||| | || |||||||||||    
T  27028831 caatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcaccaacatcacccaagtctatgtcacc 27028929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 29053338 - 29053426
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||| || ||||||||||||||  ||||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  29053338 ttggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 29053426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 4290621 - 4290690
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||| ||| |||||||||||||| | |||||||||||||||| | |||| ||||||||||||||||||    
T  4290621 cacaagaattgtgacattgtgattggccaatgtcaccaatgtcacccaactgtatgtcacccaagtgcta 4290690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 11016945 - 11017014
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| |||| ||||||||||||||   |||||||||||||||| | |||||||||||||||||||||||    
T  11016945 cacaaacattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 11017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 42628371 - 42628440
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||||||||  ||||||||||||| | ||| |||||||||||| | |||||||||||||||||||||||    
T  42628371 cacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactctatgtcacccaagtgcta 42628440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48000852 - 48000775
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    ||||||||| ||  ||||||||||||| ||||||| ||||||||||||| |||||||| |||| || |||||||||||    
T  48000852 attggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattgtggcattgtgattg 48000775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 27028793 - 27028721
Alignment:
Q  68 aaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||   |||| ||||||||| ||||||||    
T  27028793 aaacacaagcattgtgacattgtgattgtccaatgtcaccaatgtcactcaactatatgtcaccaaagtgcta 27028721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 22764753 - 22764819
Alignment:
Q  48 aatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtca 114  Q
    |||| |||||||||||||| |||||||| |||| |||||||||||||| | ||| ||||||||||||    
T  22764753 aatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcaccaatgtca 22764819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 30217505 - 30217602
Alignment:
Q  46 acaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccg 144  Q
    |||||| |||||||||||||| ||||| || |||| ||| |||||||||| | ||||||| |||||||| | ||||||||||||| ||| ||| |||||    
T  30217505 acaatgcttgtgaaagagagagaaacataaacattttgatattgtgattggcgaatgtcatcaatgtca-caaactctatgtcacacaaatgccatccg 30217602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 48000756 - 48000691
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||||||| || ||||||||||||  |||||||||||||||| | ||||| |||||||||||||    
T  48000756 cacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactcaatgtcacccaagt 48000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 38975881 - 38975947
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||| || |||| | |||||  |||||||||||||||| |||||||||||||||| |||||    
T  38975881 cacaagcattgtggcattataattgatcaatgtcaccaatgtcacctaactctatgtcacctaagtg 38975947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 42628410 - 42628333
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    ||||||||  || |||||||||||||   ||||| |||||||||||||| ||||| ||||||| || |||||||||||    
T  42628410 attggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattg 42628333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 41945931 - 41946003
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||||||| | |||||||||||||| ||| | ||||||||||   |||| ||||||||||||||| |||||    
T  41945931 cacaagcattgtaacattgtgattgaccaatattaccaatgtcactcaactttatgtcacccaagtgttatcc 41946003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 4649436 - 4649346
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagata--aacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||| || | |||||||||||  || ||| |||||||||||||| |  |||||||||||| |  ||||||||||||| |||||||||    
T  4649436 ttggtgacattggtcaatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattgaccaatgtcacc 4649346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 10419538 - 10419485
Alignment:
Q  53 ttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcac 106  Q
    |||||||||||||| ||||||||| ||| | ||||| |||||||| ||||||||    
T  10419538 ttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtcac 10419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 48000827 - 48000879
Alignment:
Q  85 cattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||||   |||||||||||||||| | |||||||||| |||||||||    
T  48000827 cattgtgattggtcaatgtcaccaatgtcacccaactctatgtgacccaagtg 48000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 5e-32; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 5995484 - 5995366
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||| |||||| |||||||||||||| ||||||||||||| || ||||||||||| | ||||| ||||||||||||     
T  5995484 attggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgttaccaatgtcatca 5995385  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  5995384 aactctatgtcacccaagt 5995366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 37155158 - 37155043
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaac 120  Q
    |||||| || |||||||||||||  |||||  |||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||||||| | |||    
T  37155158 ggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaac 37155059  T
Q  121 tctatgtcacccaagt 136  Q
    ||||||||||||||||    
T  37155058 tctatgtcacccaagt 37155043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 32540771 - 32540893
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||| | || |||||||||||||  |||||| |||||||||||||| ||||||||||||| | ||||||||||||   ||||||||||||||||||     
T  32540771 attggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatgtcaccaatgtcatcc 32540870  T
Q  118 aactctatgtcacccaagtgcta 140  Q
    || ||||||||||||||||||||    
T  32540871 aattctatgtcacccaagtgcta 32540893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 29179634 - 29179738
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    ||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||| | ||||||||||||||    
T  29179634 ccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacc 29179733  T
Q  132 caagt 136  Q
    |||||    
T  29179734 caagt 29179738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 48993940 - 48994058
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || |||||||||||   |||||||||||||||| |     
T  48993940 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccaatgtcaccc 48994039  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  48994040 aactctatgtcacccaagt 48994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 17127601 - 17127712
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    ||||||||||||  |||||| |||||||||||||| ||||||||||||| ||||||| ||||||   |||||||| ||||||| |||||||||| |||||    
T  17127601 ccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtcaatgtcactaatgtcacctaactctatatcacc 17127700  T
Q  132 caagtgctatcc 143  Q
    |||||| |||||    
T  17127701 caagtgttatcc 17127712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 44706809 - 44706923
Alignment:
Q  21 ggtgacgttagccaatcacaa-tgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaa 119  Q
    |||||| || ||||||||||| ||| |||||| |||||||||||||| |||||||||||||  | ||||||||||| | |||||||||||||||| | ||    
T  44706809 ggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatgtcacccaa 44706908  T
Q  120 ctctatgtcacccaa 134  Q
    |||||||||||||||    
T  44706909 ctctatgtcacccaa 44706923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 48498529 - 48498412
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatcta 118  Q
    |||||||| ||  |||||||||||| ||| ||| |||||||||||||| |||||||| |||| ||  ||| |||||||| |||||||| ||||||| | |    
T  48498529 ttggtgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcaccca 48498430  T
Q  119 actctatgtcacccaagt 136  Q
    ||||||||||||||||||    
T  48498429 actctatgtcacccaagt 48498412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 1091582 - 1091686
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  |||||| |||||||||||||| |||||||| |||| ||||||||||||||   || ||||||||| ||| | |||||||||||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcaccaatatcacccaactctatgtcaccc 1091681  T
Q  133 aagtg 137  Q
    |||||    
T  1091682 aagtg 1091686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 33219649 - 33219716
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgc 138  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||    
T  33219649 cacaagcattatgacattgtgattgatcaatgtcaccaatgtcatccaactctatgttacccaagtgc 33219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 36290458 - 36290556
Alignment:
Q  46 acaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccg 144  Q
    |||||| |||||||||||||| ||||||||  ||| ||||||||||||||   |||| ||||||||||| | ||||||||||||||||||| |||||||    
T  36290458 acaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccaccaatgtcacccaactctatgtcacccaagtactatccg 36290556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 9157410 - 9157306
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    ||||||||||   |||||| ||| |||||||||| ||||||||||||| ||||||||||||||   ||||| |||||||||| | ||||||||||||| |    
T  9157410 caatcacaatatcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctatgtcacac 9157311  T
Q  133 aagtg 137  Q
    |||||    
T  9157310 aagtg 9157306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 741539 - 741614
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||||||  |||||| |||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||    
T  741539 ccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatcgaccaatgtcacc 741614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 4609096 - 4608986
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  |||||| |||||||||||||| |||||||| |||| |||||||||||| |   ||||||||| |||||| | ||||| || |||| |    
T  4609096 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcaccgatgtcacccaactccatatcacac 4608997  T
Q  133 aagtgctatcc 143  Q
    |||||||||||    
T  4608996 aagtgctatcc 4608986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 21630118 - 21630032
Alignment:
Q  57 gaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||||||| ||||||||||||| ||||||||||||||   |||||||||||||||| | |||| |||||||| |||||| |||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactttatgtcacgcaagtgatatcc 21630032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 47303495 - 47303433
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  47303495 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattg 47303433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 48993979 - 48993910
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | |||||||||||||||||||||||    
T  48993979 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 48993910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 46333982 - 46334046
Alignment:
Q  31 gccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||||  |||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  46333982 gccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattg 46334046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 29371469 - 29371394
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||||||  |||||| |||||||||||||| |||||||| |||| |||||||||||||| | |||||||||    
T  29371469 ccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcacc 29371394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 34062310 - 34062235
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||||||  ||||||||||||||||||||| ||||| ||||||| || ||||||||||| | |||||||||    
T  34062310 ccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtcacc 34062235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 5995445 - 5995511
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||| || |||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  5995445 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcatccaactctatgtcacccaagtg 5995511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 15220926 - 15220837
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||  || ||||||||||||   |||||| |||||||||||||| ||||||||||||| ||| || ||||||||| |||||||||    
T  15220926 attggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattgtgagatcgtgattgaccaatgtcacc 15220837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 49444975 - 49444906
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| | |||||||||||||   ||||||||||||||| | |||||||||||||||||||||||    
T  49444975 cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactctatgtcacccaagtgcta 49444906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 8337875 - 8337951
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||| || | |||||||||||  ||||||||||||||||||||| |||||||| |||| || |||||||||||    
T  8337875 ttggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattg 8337951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 29371444 - 29371516
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||||||| ||||||||||||||   ||| |||||||||||| ||| ||||||||||| ||||||||||||    
T  29371444 cacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctctatgtcacacaagtgctatcc 29371516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 46932061 - 46931994
Alignment:
Q  69 aacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    ||||||| |||| || ||||||||||| | |||||||||||||||| | |||||||||||||||||||    
T  46932061 aacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 46931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 28395708 - 28395630
Alignment:
Q  62 agagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| ||||||||||||| ||||||||||||||   ||||||||||||||||   |||||||||| |||||| |||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcactcaactctatgttacccaaatgcta 28395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 45728387 - 45728277
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  | |||| |||||||||||||| ||||||||||||| ||| ||||||||||   ||| |||||||| ||| | ||||||||| | ||     
T  45728387 caatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctatgactcca 45728288  T
Q  133 aagtgctatcc 143  Q
    ||||| |||||    
T  45728287 aagtgttatcc 45728277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 15220887 - 15220956
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||| |||||||||| | ||| |||||||||||| | ||||||||||||||||| |||||    
T  15220887 cacaagcattgtgagattgtgattggccaatatcaccaatgtcacccaactctatgtcacccaaatgcta 15220956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 29179659 - 29179590
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   | |||||||||||||| | |||||||||||| ||||||||||    
T  29179659 cacaagcattgtgacattgtgattggtcagtgtcaccaatgtcacccaactctatgtcatccaagtgcta 29179590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 33219673 - 33219601
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtca 105  Q
    |||||||||||  | |||| |||||||||||||| ||||||||||||| | |||||||||||||  |||||||    
T  33219673 caatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaatgtca 33219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 49444951 - 49445023
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||||| ||||||| |||||| |||||||  |||||||||||| || ||||||||||| | |||||||||    
T  49444951 caatcacaatgttacaatgcttgtgagagagaga--aacacaagcattgtggcattgtgattggccaatgtcacc 49445023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 17127626 - 17127561
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||||||| ||||||||||||||   |||||||| ||||||| |||||||||| |||| |||||    
T  17127626 cacaagcattgtgacattgtgattggtcaatgtcactaatgtcacctaactctatatcacacaagt 17127561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 38674541 - 38674603
Alignment:
Q  31 gccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||||  |||||| |||||||||||||  ||||||||||||| ||||||| ||||||    
T  38674541 gccaatcacaatgtcacaatgcttgtgaaagagag--aaacacaagcattgtgacattatgattg 38674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 48604985 - 48605058
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcac 106  Q
    |||||||||||  ||||| ||||||||||||||| |||| |||||||| ||||||| | |||| | ||||||||    
T  48604985 caatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtcac 48605058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 5694914 - 5695001
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||| || | ||||||||||  || |||| |||||||||||||| ||||||||  ||| ||||||||| |||||| |||||||||    
T  5694914 ttggtgacattggtcaatcacaatatta-aatgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtcacc 5695001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 12441032 - 12441103
Alignment:
Q  72 acaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    ||||| |||||||||||||||||  | |||| ||||||||||| | || ||||||||| ||||||| |||||    
T  12441032 acaaggattatgacattgtgattagccaatgccaccaatgtcaccaaattctatgtcatccaagtgttatcc 12441103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 32540810 - 32540755
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatg 126  Q
    |||||||||| |||||||||||||| | |||| ||||||||||| | |||||||||    
T  32540810 cacaagcattgtgacattgtgattggccaatgccaccaatgtcacccaactctatg 32540755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 36381643 - 36381588
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||||||| | |||||||||||| ||||| || ||||||||| |||||||    
T  36381643 tgacattgtgattggccaatgtcaccaatatcatcgaattctatgtcatccaagtg 36381588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 46333982 - 46333943
Alignment:
Q  106 ccaatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  46333982 ccaatgtcatccaactctatgtcacccaagtgctacccga 46333943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 1819527 - 1819573
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcat 79  Q
    |||||||||||  |||||| |||||||||||||| ||||||||||||    
T  1819527 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 1819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 6539666 - 6539724
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||| |||||||||||| ||||| | | | |||||||||||||||||    
T  6539666 tgacattgtggttgaccaatgtcaccaatatcatcaaccacaatgtcacccaagtgcta 6539724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 9884892 - 9884834
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||| |||||||||||||||| | | | |||||||||| ||||||||    
T  9884892 tgacattgtggttgaccaatgtcaccaatgtcaccaaccactatgtcaccaaagtgcta 9884834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 44183438 - 44183476
Alignment:
Q  107 caatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  44183438 caatgtcacctaactctatgtcacccaagtgctacccga 44183476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 19711217 - 19711327
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    |||||||||||| |||||||  ||||||||||||  ||||| ||| ||| ||||||||| ||   | ||||| |||||||||| | |||| ||| |||||    
T  19711217 ccaatcacaatgttacaatgcatgtgaaagagag--aaacataagaattgtgacattgtaatcagccaatgttaccaatgtcaccaaactttatatcacc 19711314  T
Q  132 caagtgctatccg 144  Q
     ||||| ||||||    
T  19711315 taagtgttatccg 19711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 31342314 - 31342253
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||||||||||| | ||||||| |  ||||| | |||||||||||||||||||| |||||    
T  31342314 tgacattgtgattggccaatgtcatcggtgtcacccaactctatgtcacccaagtgttatcc 31342253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 45728363 - 45728396
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtc 104  Q
    ||||||||||||||||||||||||||| ||||||    
T  45728363 cacaagcattatgacattgtgattgaccaatgtc 45728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 4609072 - 4609108
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||| |||||||||||||||| |||||||||    
T  4609072 cacaagcattgtgacattgtgattgaccaatgtcacc 4609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 28928803 - 28928859
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaa 75  Q
    |||||||| || |||||||||||||  ||| || |||||||||||||| ||||||||    
T  28928803 ttggtgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaa 28928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 46932072 - 46932123
Alignment:
Q  85 cattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||||   |||||||||||||||| | ||||||||||||||||||||    
T  46932072 cattgtgattggtcaatgtcaccaatgtcacc-aactctatgtcacccaagtg 46932123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 17751017 - 17750893
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    |||| |||| || ||| |||||||||  |||||| |||||||||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||     
T  17751017 attgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatgtcaccaatgtcatc- 17750919  T
Q  118 aactctatgtcacccaagtgctatcc 143  Q
    ||||||||||||| ||||||||||||    
T  17750918 aactctatgtcacacaagtgctatcc 17750893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 551203 - 551304
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||| ||||| || ||||||||||||    
T  551203 caatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaattctatgtcaccc 551302  T
Q  133 aa 134  Q
    ||    
T  551303 aa 551304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 12343215 - 12343126
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| || |||||||||||||  |||||| |||||||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  12343215 attggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaatgtcacc 12343126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 24587558 - 24587454
Alignment:
Q  36 tcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaag 135  Q
    ||||||||  |||||| |||||||| || || ||||||||||||| |||||||||||||||| |||||||| ||||||| | |||||||||||||| |||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctatgtcacctaag 24587459  T
Q  136 tgcta 140  Q
    |||||    
T  24587458 tgcta 24587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 10521873 - 10521960
Alignment:
Q  19 ttggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcac 106  Q
    |||||||| || |||||||||||||  |||||| || ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  10521873 ttggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtcac 10521960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 24618660 - 24618594
Alignment:
Q  74 aagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||||||||||||||||  |||||||||||||||| | ||||||||||||| |||||||||    
T  24618660 aagcattatgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcactcaagtgcta 24618594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 24975814 - 24975749
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  24975814 cacaagcattgtggcattgtgattgaccaatgtcaccaatgtcagccaactctatgtcacccaagt 24975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 31654389 - 31654331
Alignment:
Q  49 atgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| | |||||||||    
T  31654389 atgtttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacc 31654331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 7384550 - 7384481
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| |||||||||||||||||||   |||||||| ||||||||| |||||||| ||||| ||||||||    
T  7384550 cacaaacattatgacattgtgattggtcaatgtcactaatgtcatccaactctatatcacctaagtgcta 7384481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13043572 - 13043480
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaat 110  Q
    ||||||||| || || |||||||||   |||||| |||||||||||||| ||||||||||||| |||||||  ||||||| ||| || |||||    
T  13043572 attggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattgtgacatttcgattgaccaatatcgccaat 13043480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 24618639 - 24618701
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||  | |||| || ||||||||||| ||||||||||||| ||||||||||||||    
T  24618639 caatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgattg 24618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 2315342 - 2315403
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgatt 94  Q
    |||||||||||  ||||||||||||||||||||  ||||| ||||||||||  |||||||||    
T  2315342 caatcacaatgtcacaatgtttgtgaaagagagcgaaacataagcattatggtattgtgatt 2315403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 17750978 - 17751047
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| |||||||||||| | | ||||||| |||| ||| | ||||||||||||| |||||||||    
T  17750978 cacaagcattgtgacattgtgatcggccaatgtcatcaatatcacccaactctatgtcacacaagtgcta 17751047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 10521885 - 10521845
Alignment:
Q  106 ccaatgtcatctaactctatgtcacccaagtgctatccgat 146  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  10521885 ccaatgtcaccaaactctatgtcacccaagtgctatccgat 10521845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 12343176 - 12343232
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgt 127  Q
    |||||||||| |||||||||||||| | |||||||||||| ||| | ||||||||||    
T  12343176 cacaagcattgtgacattgtgattggccaatgtcaccaatctcacccaactctatgt 12343232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 13043533 - 13043602
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||| |||||||||  | |||||||||||| |||   ||||||||||||||||| |||||    
T  13043533 cacaagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctatgtcacccaaatgcta 13043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 16514539 - 16514421
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| |||||||||||||||| ||| ||||||| | |||||||||||||||| |     
T  16514539 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatgtcaccaatgtcaccc 16514440  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  16514439 aactctatgtcacccaagt 16514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 29508713 - 29508832
Alignment:
Q  18 attggtgacgttagccaatcacaa-tgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatc 116  Q
    ||||||||| ||  |||||||||| ||| |||||| |||||||||||||| |||||||||||||  | ||||||||||| | |||||||||||| ||| |    
T  29508713 attggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatatcacc 29508812  T
Q  117 taactctatgtcacccaagt 136  Q
     |||||||||||||||||||    
T  29508813 caactctatgtcacccaagt 29508832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 6722053 - 6721968
Alignment:
Q  31 gccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatc 116  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||| ||||||||||   ||||||||||||||||||    
T  6722053 gccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatgtcaccaatgtcatc 6721968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 14229376 - 14229488
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| || | |||||||||||  |||||| |||||||||||||| ||||||||||||| ||||||||||||||          |||||||||||     
T  14229376 attggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg----------ccaatgtcatcc 14229465  T
Q  118 aactctatgtcacccaagtgcta 140  Q
    |||||||||||||||||||||||    
T  14229466 aactctatgtcacccaagtgcta 14229488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 14470615 - 14470713
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatc 116  Q
    ||||||||| ||  |||||||||||| | ||||| |||||||||||||| |||||||| |||| |||||||||||||| ||||||| |||||| |||||    
T  14470615 attggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggctaatgttaccaatatcatc 14470713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 6217247 - 6217336
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| || |||||||||||||| |||||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  6217247 attggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 6217336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 2828696 - 2828610
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||| || |||||||||||||  |||||| || ||||||||||| ||||||||||||| |||||||||||||| | |||||||||    
T  2828696 ggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcacc 2828610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 38933702 - 38933625
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||| |||||||| ||||  |||||| |||||||||||||| ||||||||||||| || |||||||||||    
T  38933702 attggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 38933625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 14229415 - 14229355
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    |||||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  14229415 cacaagcattgtgacattgtgattgaccaatgtcaccaatgtcaccgaactctatgtcacc 14229355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 15011391 - 15011299
Alignment:
Q  22 gtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtca 114  Q
    ||||| || |||||||||||||  |||||| |||||||||||||| |||||||| |||| || ||||||||||| | ||| ||||||||||||    
T  15011391 gtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcaccaatgtca 15011299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 14892349 - 14892412
Alignment:
Q  84 acattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccgatt 147  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  14892349 acattgtgattgatcaatgtcaccaatgtcatccaactctatgtcacccaaatgctacccgatt 14892412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 32545867 - 32545937
Alignment:
Q  74 aagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccg 144  Q
    ||||||| ||||||| |||||| | ||||||||||||||||   |||||||||||||||||||||||||||    
T  32545867 aagcattgtgacattatgattggccaatgtcaccaatgtcactaaactctatgtcacccaagtgctatccg 32545937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 16514500 - 16514569
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   |||||||||||| ||| | |||||||||||||||||||||||    
T  16514500 cacaagcattgtgacattgtgattggtcaatgtcaccaatctcacccaactctatgtcacccaagtgcta 16514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 37961807 - 37961746
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgat 93  Q
    ||||||||||||| |||||| |||||||||||||| |||||||| ||||||| |||||||||    
T  37961807 ccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattatggcattgtgat 37961746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 38933663 - 38933732
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||| |||||| | || ||||||||||||| | |||||||||||||||||||||||    
T  38933663 cacaagcattgtgacattatgattggccaacgtcaccaatgtcacccaactctatgtcacccaagtgcta 38933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 6217286 - 6217222
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaag 135  Q
    |||||||||| || ||||||||||| | |||||||||||||||| | ||||||||||||||||||    
T  6217286 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaag 6217222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 32545903 - 32545773
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagca--ttatgacattgtgattgactaatgtcaccaatgtcat 115  Q
    ||||||||| || |||||||| ||||  |||||| || ||||||||||||||| | ||     || |||||| ||| ||||| ||||||||||||||||     
T  32545903 attggtgacattggccaatcataatgtcacaatgcttatgaaagagagataaaaaaaacttacttgtgacatcgtggttgaccaatgtcaccaatgtcac 32545804  T
Q  116 ctaactctatgtcacccaagtgctatccgat 146  Q
    |||||||||||||||| ||||| ||| ||||    
T  32545803 ctaactctatgtcacctaagtgttattcgat 32545773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 33018621 - 33018679
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtca 129  Q
    |||||||||| |||||||||||||||| ||| |||||||||||| | ||||||||||||    
T  33018621 cacaagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtca 33018679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 37762038 - 37762116
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaat 110  Q
    ||||||||||||   ||||| |||||||||||| | ||||||||||||| ||| ||||||||||||  |||||||||||    
T  37762038 ccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgatattgtgattgacccatgtcaccaat 37762116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 6722027 - 6722096
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| |||| |||||||||||||| | ||| |||| ||||||| | |||||||||||||||||||||||    
T  6722027 cacaaacattgtgacattgtgattggccaatatcactaatgtcaaccaactctatgtcacccaagtgcta 6722096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 14470654 - 14470582
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    ||||||||||   ||||||||||||   |||||||||||||||| | ||||||||||||| ||||||||||||    
T  14470654 cacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacacaagtgctatcc 14470582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 2894063 - 2893989
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||||| ||  |||||| |||||||||||||| ||| ||||||||| ||| |||||||||| | |||||||||    
T  2894063 caatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtcacc 2893989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 24116020 - 24115910
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||   ||||| ||||||||||| |  ||||||| ||||| | |||||||||||| | ||||| |||||||| |   |||||||| |||| |    
T  24116020 caatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggccaatgttaccaatgtgactcaactctatctcacac 24115921  T
Q  133 aagtgctatcc 143  Q
    |||||||||||    
T  24115920 aagtgctatcc 24115910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 9173044 - 9173117
Alignment:
Q  58 aaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    ||||| ||| ||| ||||||||| || ||||||||||| | ||| |||||||||||| | ||||||||||||||    
T  9173044 aaagaaagagaaatacaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatgtcacc 9173117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 29925593 - 29925682
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| || |||  ||||||||  | |||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  29925593 attggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 29925682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 24115996 - 24116062
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    ||||||||||  ||||||||||||||| ||| |||| |||| || | ||||||||||||| ||||||    
T  24115996 cacaagcattgcgacattgtgattgaccaatatcactaatggcacccaactctatgtcacacaagtg 24116062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 37633025 - 37632988
Alignment:
Q  99 aatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||||||||||||| | |||||||||||||||||||    
T  37633025 aatgtcaccaatgtcaccaaactctatgtcacccaagt 37632988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 565372 - 565332
Alignment:
Q  70 acacaagcattatgacattgtgattgactaatgtcaccaat 110  Q
    ||||||| |||||||||||||||||| | ||||||||||||    
T  565372 acacaaggattatgacattgtgattggccaatgtcaccaat 565332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 16439238 - 16439128
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  |||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| | | | |||||||| ||| ||    
T  16439238 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctatatcatcc 16439139  T
Q  133 aagtgctatcc 143  Q
    |||||||||||    
T  16439138 aagtgctatcc 16439128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 19655273 - 19655155
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatct 117  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||||||||| |     
T  19655273 attggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgtcaccc 19655174  T
Q  118 aactctatgtcacccaagt 136  Q
    |||||||||||||||||||    
T  19655173 aactctatgtcacccaagt 19655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 3180098 - 3180208
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||| ||||  ||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| | | |||||||||| || |    
T  3180098 caatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcaccaatgtta-ccaactctatgtgacac 3180196  T
Q  133 aagtgctatccg 144  Q
    ||||||||||||    
T  3180197 aagtgctatccg 3180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 29699482 - 29699386
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtca 114  Q
    ||||||||| || |||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | ||||||||||||||||    
T  29699482 attggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtca 29699386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 291197 - 291094
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  ||||||||||||||||||| | ||| ||||||||| || ||||||||||| | |||||||||||||||| | ||||||||||||| |    
T  291197 caatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcactc 291098  T
Q  133 aagt 136  Q
    ||||    
T  291097 aagt 291094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 30117865 - 30117967
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacc 131  Q
    ||||||||||||  ||||||||| ||||| ||||| ||||||||||||| || |||| |||||||| ||| |||||||||||||| |||||||||||| |    
T  30117865 ccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatgattgaccaatatcaccaatgtcatccaactctatgtcatc 30117964  T
Q  132 caa 134  Q
    |||    
T  30117965 caa 30117967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 19598417 - 19598329
Alignment:
Q  48 aatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||| |||||||||||||| ||||||||||||| ||  |||||||||||| |||||||||||||| | | |||||||||||||||||||    
T  19598417 aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcacccaagt 19598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 2093999 - 2093930
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||||||||||||||||||||||||  |||||||||||| ||| | |||||||||||||||||||||||    
T  2093999 cacaagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctatgtcacccaagtgcta 2093930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 2953266 - 2953335
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| |||||||||||||| | |||||||||||||||| | |||||||||||||||||||||||    
T  2953266 cacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 2953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 12913903 - 12913796
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcaccc 132  Q
    |||||||||||  | |||| |||||||||||||| | ||||||| ||| |||||||||||||| | ||||||||||||||||   |||| |||||||| |    
T  12913903 caatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatgtcaccaatgtcactcaactatatgtcacac 12913804  T
Q  133 aagtgcta 140  Q
    ||||||||    
T  12913803 aagtgcta 12913796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 16971220 - 16971294
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatccga 145  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | ||||||||||||||||||||||| ||||    
T  16971220 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccga 16971294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 3899954 - 3899865
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||    
T  3899954 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 3899865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 16971259 - 16971170
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| ||  ||||||||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||||| | |||||||||    
T  16971259 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 16971170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 29699443 - 29699512
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| |||||||||||||| | |||||||||||| ||| | |||||||||||||||||||||||    
T  29699443 cacaagcattgtgacattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagtgcta 29699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 12913879 - 12913938
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcac 130  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| | |||||||||||||    
T  12913879 cacaagcattatgacattgtgattgaccaatatcaccaatgtcacccaactctatgtcac 12913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 291173 - 291242
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| |||| |||||||||||||||  |||||||||||||||| | |||||||| ||||||||||||||    
T  291173 cacaaacattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatatcacccaagtgcta 291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 3899915 - 3899984
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   |||||||||||||||| | ||||||| |||||||||||||||    
T  3899915 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 3899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 28819032 - 28818943
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||| || | |||||| ||||  |||||| |||||||||||||| ||| ||||| ||| |||||||||||||||| |||||||||    
T  28819032 attggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatgtcacc 28818943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 13312321 - 13312257
Alignment:
Q  76 gcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||| |||||||||||||||  ||||||| |||||||| |||||||||||||||| ||||||||    
T  13312321 gcattgtgacattgtgattgatcaatgtcatcaatgtcacctaactctatgtcacctaagtgcta 13312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 2356351 - 2356416
Alignment:
Q  74 aagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||||| |||||| ||||||| | |||||||||||||||||| ||||||||||||| |||||||||    
T  2356351 aagcattgtgacat-gtgattggccaatgtcaccaatgtcatccaactctatgtcacacaagtgcta 2356416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 2953305 - 2953243
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcatt 80  Q
    ||||||||| || |||||||||||||  |||||| |||||||||||||| |||||||||||||    
T  2953305 attggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 2953243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 19655234 - 19655300
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtg 137  Q
    |||||||||| ||||||||||||||   ||||||||||||||||   ||||||||||||||||||||    
T  19655234 cacaagcattgtgacattgtgattggacaatgtcaccaatgtcactcaactctatgtcacccaagtg 19655300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 2356386 - 2356298
Alignment:
Q  18 attggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaa 109  Q
    ||||||||| || |||||||||| ||  |||||| || |||||||||||  |||||||||||||| ||||||| |||| |||||||||||||    
T  2356386 attggtgacattggccaatcaca-tgtcacaatgcttatgaaagagaga--aacacaagcattataacattgtaattgcctaatgtcaccaa 2356298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 38134409 - 38134473
Alignment:
Q  31 gccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattg 95  Q
    |||||||||||||  |||||| | |||||||||| | ||||||||||||| ||||||||||||||    
T  38134409 gccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattg 38134473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 28818993 - 28819056
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaa 134  Q
    |||||||||| ||||||| |||||||| |||||||||||| |||   |||||||||||||||||    
T  28818993 cacaagcattgtgacattatgattgaccaatgtcaccaatatcactcaactctatgtcacccaa 28819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 2093975 - 2094036
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgatt 94  Q
    |||||||||||  | |||| |||||||||||||| ||||||||||||||||| | |||||||    
T  2093975 caatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattatgatagtgtgatt 2094036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 39031202 - 39031290
Alignment:
Q  46 acaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaa 134  Q
    |||||| |||||||||| ||| ||| ||||  ||||||| |||||||||||  | |||||||||||||| |  ||||||||||| ||||    
T  39031202 acaatgcttgtgaaagaaagagaaatacaaatattatgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatccaa 39031290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 32485630 - 32485697
Alignment:
Q  76 gcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    ||||| ||| |||||||||||  |||||||||||||||| | |||||| |||||| |||||| |||||    
T  32485630 gcattgtgatattgtgattgatcaatgtcaccaatgtcacccaactctgtgtcacacaagtgttatcc 32485697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 1638521 - 1638447
Alignment:
Q  69 aacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    ||||||| |||| |||||||||||||| | ||| |||| ||| ||| | |||||||| ||||| |||||||||||    
T  1638521 aacacaaacattgtgacattgtgattggccaatatcacaaatatcacccaactctatatcacctaagtgctatcc 1638447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 6912359 - 6912325
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtca 105  Q
    |||||||||| ||||||||||||||||||||||||    
T  6912359 cacaagcattgtgacattgtgattgactaatgtca 6912325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 11983306 - 11983249
Alignment:
Q  82 tgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    ||||||| |||||||| |||||||||||| ||| | || ||||||||||||||||||||    
T  11983306 tgacattttgattgaccaatgtcaccaatatca-ccaattctatgtcacccaagtgcta 11983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 7009404 - 7009449
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatc 116  Q
    |||||||||| ||| |||||||||||| ||| ||||||||||||||    
T  7009404 cacaagcattgtgatattgtgattgaccaatatcaccaatgtcatc 7009449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 26662475 - 26662548
Alignment:
Q  71 cacaagcattatgacattgtgatt-gactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||| ||| ||||||||||||| ||| |||||||||||| ||| | ||||||| ||||| |||||| |||||    
T  26662475 cacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaactctaagtcacacaagtgttatcc 26662548  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 26934070 - 26934143
Alignment:
Q  71 cacaagcattatgacattgtgatt-gactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatcc 143  Q
    |||||| ||| ||||||||||||| ||| |||||||||||| ||| | ||||||| ||||| |||||| |||||    
T  26934070 cacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaactctaagtcacacaagtgttatcc 26934143  T

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Target: scaffold0161 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 27256 - 27361
Alignment:
Q  31 gccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcac 130  Q
    |||||||||||||  | |||  |||||||||||||| ||||| ||||||| || ||||||||||| | ||| |||||||||||| | |||||||| ||||    
T  27256 gccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatatcac 27355  T
Q  131 ccaagt 136  Q
    ||||||    
T  27356 ccaagt 27361  T

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Target: scaffold0161; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 27282 - 27217
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagt 136  Q
    |||||| |||||||||||||||||| | ||| |||| ||||||| | |||||||||||||||||||    
T  27282 cacaagaattatgacattgtgattggccaatatcactaatgtcacccaactctatgtcacccaagt 27217  T

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Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 63869 - 63783
Alignment:
Q  21 ggtgacgttagccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    |||||| || |||||||||||||  |||||| |||||||||||||| |||||||| |||| || ||||||||||| | |||||||||    
T  63869 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 63783  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 49765 - 49696
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgcta 140  Q
    |||||||||| ||||||||||||||   ||||||| |||||||| | |||||||||||||||||||||||    
T  49765 cacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactctatgtcacccaagtgcta 49696  T

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Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 49740 - 49815
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcattatgacattgtgattgactaatgtcacc 107  Q
    ||||||||||||  |||||| |||||||||| ||| ||||||||||||| || ||||||||||| | |||||||||    
T  49740 ccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggccaatgtcacc 49815  T

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Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 19184 - 19113
Alignment:
Q  71 cacaagcattatgacattgtgattgactaatgtcaccaatgtcatctaactctatgtcacccaagtgctatc 142  Q
    |||||||||| |||||||||||||||  ||| ||| |||||||| | ||||||||||||| ||| |||||||    
T  19184 cacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctatgtcacacaaatgctatc 19113  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 2924 - 2972
Alignment:
Q  32 ccaatcacaatgctacaatgtttgtgaaagagagataaacacaagcatt 80  Q
    ||||||||||||  ||||||||||||||||||||| |||||||| ||||    
T  2924 ccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 2972  T

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Target: scaffold1033 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 2313 - 2266
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcatt 80  Q
    |||||||||||  |||||| |||||||||||||| |||||||||||||    
T  2313 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 2266  T

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Target: scaffold1029 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 2313 - 2266
Alignment:
Q  33 caatcacaatgctacaatgtttgtgaaagagagataaacacaagcatt 80  Q
    |||||||||||  |||||| |||||||||||||| |||||||||||||    
T  2313 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 2266  T

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