View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18857_low_18 (Length: 269)
Name: NF18857_low_18
Description: NF18857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18857_low_18 |
 |  |
|
| [»] scaffold0627 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 8644403 - 8644660
Alignment:
| Q |
1 |
cgcaaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacactggaggagaaggaaatga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644403 |
cgcaaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacactggaggagaaggaaatga |
8644502 |
T |
 |
| Q |
101 |
ttgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggataatga |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644503 |
ttgcaacctctcactttcaaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggataatga |
8644602 |
T |
 |
| Q |
201 |
agattcaaacctgatccaatagaaatttgaggatctacttcagcatttctccatgatg |
258 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644603 |
agactcaaacctgatccaatagaaatttgaggatctacttcagcatttctccatgatg |
8644660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 8678005 - 8678262
Alignment:
| Q |
1 |
cgcaaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacactggaggagaaggaaatga |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
8678005 |
cgcaaatgtaaagtaatcctcttaattttcccatgtgaatacgcttgttacaacgaaatccattattatgattttgaaatactggaggagaaggaaatga |
8678104 |
T |
 |
| Q |
101 |
ttgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggataatga |
200 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||| | ||||||||||| | |
|
|
| T |
8678105 |
ttgcaacttctcagtttctaaacagaaacacaatatagacatttcttgaccctcaaatccgatccaatgaagcgcaccattaatacaagtgggataacgg |
8678204 |
T |
 |
| Q |
201 |
agattcaaacctgatccaatagaaatttgaggatctacttcagcatttctccatgatg |
258 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8678205 |
agcctcaaatctgatccaatagaaatttgaggatccacttcagcatttctccatgatg |
8678262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 3 - 258
Target Start/End: Original strand, 8637060 - 8637315
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacactggaggagaaggaaatgatt |
102 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8637060 |
caaatataaagtaatccccttaattctccaatgcgaatacactcgttatgacgaaatccattattttgattttgtaacactggaggagaaggaaatgatt |
8637159 |
T |
 |
| Q |
103 |
gcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggataatgaag |
202 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| || |||||| ||| ||||||||||| |||| |
|
|
| T |
8637160 |
gcaacctctcattttctaaacagaaacacaatatagacctttcttgacccttaaatctgatccaatgaatcgtaccattcacacaagtgggataacgaag |
8637259 |
T |
 |
| Q |
203 |
attcaaacctgatccaatagaaatttgaggatctacttcagcatttctccatgatg |
258 |
Q |
| |
|
| | |||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
8637260 |
ccatatatttgatccaatagaaatttggggatccacttcagcatttctccatgatg |
8637315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 195
Target Start/End: Complemental strand, 1600213 - 1600018
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacac---tggaggagaaggaaatg |
99 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||| || | | ||||| || | ||||||||| |||||| |||| | ||||||||||||||||| |
|
|
| T |
1600213 |
caaatgtaaagaaatccctttaattctcccatgctaacatggctgttaccacaagttccattattatgatttccaaactcatgtggaggagaaggaaatg |
1600114 |
T |
 |
| Q |
100 |
attgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggat |
195 |
Q |
| |
|
| ||||||||||||||||| ||||||||| |||||| ||| ||| ||| ||||| |||| ||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
1600113 |
actgcaacctctcactttcaaaacagaaaaccaatattgacatttgctcaccctcatatcttatccaatgaagtgcaccattcacacaagtgggat |
1600018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 9074555 - 9074443
Alignment:
| Q |
84 |
ggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaa |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||| ||||||| ||||||| | || ||| |||| ||||||||||| |||||||| | |
|
|
| T |
9074555 |
ggaggagaaggaaatgactgcaacctctcactttcaaaacagaaaaacaatattgacctttgctgattttcatatcttatccaatgaagtgcaccattca |
9074456 |
T |
 |
| Q |
184 |
cataagtgggata |
196 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
9074455 |
cacaagtgggata |
9074443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 8529213 - 8529326
Alignment:
| Q |
83 |
tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccatta |
182 |
Q |
| |
|
||||||||||||||| || |||||||||||| |||| || |||||| |||||| ||||||| | | |||||||||| ||||||||||| |||||||| |
|
|
| T |
8529213 |
tggaggagaaggaaacgactgcaacctctcattttcaaagcagaaaaccaatattgacctttgctgaccctcaaatcttatccaatgaagtgcaccattc |
8529312 |
T |
 |
| Q |
183 |
acataagtgggata |
196 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
8529313 |
acacaagtgggata |
8529326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 8547933 - 8547823
Alignment:
| Q |
86 |
aggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaaca |
185 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||| | | |||| ||||| |||||||||||| |||| ||| ||| |
|
|
| T |
8547933 |
aggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctttccttaaatcggatccaatgaagtgcacgattcaca |
8547834 |
T |
 |
| Q |
186 |
taagtgggata |
196 |
Q |
| |
|
|||||||||| |
|
|
| T |
8547833 |
caagtgggata |
8547823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 258
Target Start/End: Original strand, 8641570 - 8641822
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattatttt---gattttgaaacac---tggaggagaaggaa |
96 |
Q |
| |
|
||||||||| | |||||| |||| |||||||||| |||| || ||||| | ||| ||||||||| | ||||| |||||| |||||||||||||| |
|
|
| T |
8641570 |
caaatgtaaggaaatccctttaactctcccatgctaataagcctgttaccatgaattccattattattatgatttccaaacacatgtggaggagaaggaa |
8641669 |
T |
 |
| Q |
97 |
atgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggata |
196 |
Q |
| |
|
|| | | ||| ||||||||||| ||||||||||| ||||| ||||||| || |||||||| |||| |||||||| ||| ||| ||| |||||||||| |
|
|
| T |
8641670 |
ataacttcaatctctcactttccaaacagaaacataatattgacctttgctccccctcaaatttgattcaatgaagaacactattcacacaagtgggata |
8641769 |
T |
 |
| Q |
197 |
atgaagattcaaacctgatccaatagaaatttgaggatctacttcagcatttctccatgatg |
258 |
Q |
| |
|
| |||| || | ||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
8641770 |
cttaagactcga---------aatagaaatctgaggatccacttcaacatttctccatgatg |
8641822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 8535694 - 8535890
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaaca---ctggaggagaaggaaatg |
99 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||| |||| | |||| | ||||||||||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
8535694 |
caaatgtaaagaaatccctttaattctcccatgctaatatgtctattactaagaaatccattattatgatttccaaacatctgtggaggagaaggaaatg |
8535793 |
T |
 |
| Q |
100 |
attgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggata |
196 |
Q |
| |
|
| | || | |||||||||| || |||||| |||||| ||||||| | | |||||||| | |||||| || |||||||| ||| |||||||||| |
|
|
| T |
8535794 |
acttcagcgtctcactttcaaagcagaaaatcaatattgacctttgcagaccatcaaatcttagccaatgtagtgcaccattcacacaagtgggata |
8535890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 2904836 - 2904783
Alignment:
| Q |
83 |
tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatat |
136 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
2904836 |
tggaggagaaggaaatgattgcatcctctcactttcaaaactgaaacacaatat |
2904783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 2844924 - 2844840
Alignment:
| Q |
55 |
gaaatccattattttgattttgaaacac---tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatat |
136 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||| || ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
2844924 |
gaaatccattatcatgatttccaaacacatgtggaggagaaggaaacgactgcaacctctcactttcaaaattgaaacacaatat |
2844840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 2856751 - 2856667
Alignment:
| Q |
55 |
gaaatccattattttgattttgaaacac---tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatat |
136 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||| || ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
2856751 |
gaaatccattatcatgatttccaaacacatgtggaggagaaggaaacgactgcaacctctcactttcaaaattgaaacacaatat |
2856667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 2874361 - 2874277
Alignment:
| Q |
55 |
gaaatccattattttgattttgaaacac---tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatat |
136 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||| || ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
2874361 |
gaaatccattatcatgatttccaaacacatgtggaggagaaggaaacgactgcaacctctcactttcaaaattgaaacacaatat |
2874277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 2856588 - 2856547
Alignment:
| Q |
221 |
agaaatttgaggatctacttcagcatttctccatgatgatgt |
262 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
2856588 |
agaaatttgaggatccacttcaacatttctccatgatgatgt |
2856547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 2874198 - 2874161
Alignment:
| Q |
221 |
agaaatttgaggatctacttcagcatttctccatgatg |
258 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
2874198 |
agaaatttgaggatccacttcaacatttctccatgatg |
2874161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 9003653 - 9003685
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatg |
35 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
9003653 |
caaatgtaaagaaatccccttaattctcccatg |
9003685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 48361765 - 48361569
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacac---tggaggagaaggaaatg |
99 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||| |||| || ||||| | ||| ||||||||| |||||| |||||| ||||||||||||||||| |
|
|
| T |
48361765 |
caaatgtaaagaaatccctttaattctcccatgctaatatgcctgttaccaagaattccattattatgatttccaaacacatgtggaggagaaggaaatg |
48361666 |
T |
 |
| Q |
100 |
attgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtgggata |
196 |
Q |
| |
|
| |||| |||||||||||| ||||||||| ||||||| ||||||| | | |||||||||| ||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
48361665 |
actgcaccctctcactttcaaaacagaaaaacaatattgacctttgctgaccctcaaatcttatccaatgaagtgcaccattcacacaagtgggata |
48361569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 35780089 - 35780202
Alignment:
| Q |
83 |
tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccatta |
182 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||| ||||| ||||| ||||| ||| ||| || |||||||| ||||||| |||||| ||||||| |
|
|
| T |
35780089 |
tggaggagaaggaaatggctgcaacctctcaccttcaaaacaaaaacataatattgacttttgttgcccctcaaatttgatccagtgaagcacaccattc |
35780188 |
T |
 |
| Q |
183 |
acataagtgggata |
196 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
35780189 |
acacaagtgggata |
35780202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 35780021 - 35780062
Alignment:
| Q |
3 |
caaatgtaaagtaatccccttaattctcccatgcgaatacgc |
44 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||| ||||||| |
|
|
| T |
35780021 |
caaatgtaaagaaatccctttaattctcccatgctaatacgc |
35780062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 9443374 - 9443487
Alignment:
| Q |
83 |
tggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccatta |
182 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| || |||||| |||||| ||||||| |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
9443374 |
tggaggagaaggaaatgactgcaacctctcactttcaaagcagaaaaccaatattgacctttgctcatcctcaaatcttatccaatgaagtgcaccattc |
9443473 |
T |
 |
| Q |
183 |
acataagtgggata |
196 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
9443474 |
acacaagtgggata |
9443487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 4942 - 5054
Alignment:
| Q |
81 |
actggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccat |
180 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| || ||||| |||||||||| ||| |||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
4942 |
actgggggagagggaaatgattgcaacctctcactgtcaaaacaaaaacacaata--gacgtttcctttccctcaaatctgatccaatgaagtgcaccat |
5039 |
T |
 |
| Q |
181 |
taacataagtgggat |
195 |
Q |
| |
|
| ||| ||||||||| |
|
|
| T |
5040 |
tcacacaagtgggat |
5054 |
T |
 |
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Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 16716641 - 16716755
Alignment:
| Q |
81 |
actggaggagaaggaaatgattgcaacctctcactttctaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccat |
180 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||| ||||| ||||||||||||||| |||| |||||||| ||| ||||||||| ||||||| |
|
|
| T |
16716641 |
actgggggagaaggaaatgaatgcaacttctcactttcaaaacaaaaacacaatatagacatttcccttccctcaaatgtgaaccaatgaagtgcaccat |
16716740 |
T |
 |
| Q |
181 |
taacataagtgggat |
195 |
Q |
| |
|
| ||| ||||||||| |
|
|
| T |
16716741 |
tcacacaagtgggat |
16716755 |
T |
 |
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Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 5130964 - 5131093
Alignment:
| Q |
4 |
aaatgtaaagtaatccccttaattctcccatgcgaatacgctcgttacgacgaaatccattattttgattttgaaacac---tggaggagaaggaaatga |
100 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||| ||| ||||| | | | ||| |||||| |||||| |||||| |||||||||||| ||||| |
|
|
| T |
5130964 |
aaatgtaaagaaatccctttaattctcccatgccgatatgctcggtgccataaaaatcattat---gattttcaaacacgtgtggaggagaagggaatga |
5131060 |
T |
 |
| Q |
101 |
ttgcaacctctcactttctaaacagaaacacaa |
133 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||| |
|
|
| T |
5131061 |
ttgcaatctctcactttcaaaactgaaacacaa |
5131093 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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