View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18857_low_2 (Length: 896)
Name: NF18857_low_2
Description: NF18857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18857_low_2 |
 |  |
|
| [»] scaffold0856 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 302 - 613
Target Start/End: Complemental strand, 27658432 - 27658121
Alignment:
| Q |
302 |
ggtttaggattttttatcttcttcttatctactaagaatcaaaccaacgtttagcacaacaaggtataacaacaattacaagccactgaaattctaaaaa |
401 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27658432 |
ggtttaggatttttttccttcttcttatctactaagaatcaaaccaacgtttagcacaacaaggtataacaacaattacaagccactgaaattctaaaaa |
27658333 |
T |
 |
| Q |
402 |
caagaacagagaaaggaaaaaacctgggtatgaaaacaaggagatgaatatggcgtcgcagccgagacaggcggagtgaccgaaaatagcatgagagggt |
501 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27658332 |
caagaacagagaaaggaaaaaacctgggtatgaaaacaaggagatgaatatggcgtcgcagccgagacaggcggagtgaccgaaaatagcatgagagggt |
27658233 |
T |
 |
| Q |
502 |
ggtactgtacaaagatgaagaaggagtgacgagaagctatgagtgaatgaaagataatttgttcttgcttataggaaatgagtgaatcagagagagggaa |
601 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
27658232 |
ggcactgtacaaagatgaagaaggagtgacgagaagctatgagtgaatgaaagataatttgttcttgcttataggaaatgagtgaatcagagagagagaa |
27658133 |
T |
 |
| Q |
602 |
ggaaaacgaaac |
613 |
Q |
| |
|
|||||||||||| |
|
|
| T |
27658132 |
ggaaaacgaaac |
27658121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 27658724 - 27658500
Alignment:
| Q |
10 |
aaaatacaagagaaaaattgtaacacaaaattgattatggggtattagatttaagtattagctattttgaagtctataatcatgcaattaagttgagaaa |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27658724 |
aaaatacaagagaaaaattgtaacacaaaattgattatggggtattagatttaagtattagctgttttgaagtctataatcatgcaattaagttgagaaa |
27658625 |
T |
 |
| Q |
110 |
attaatattgaacatattcagtatataaatcttaatcaacttcatcatttcgtcaattcaaaaatttagggtttttaattagaaatttggggaaaacgaa |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27658624 |
attaatattgaacatattcagtatataaatcttaatcaatttcatcatttcgtcaattcaaaaatttagggtttttaatttgaaatttggggaaaacgaa |
27658525 |
T |
 |
| Q |
210 |
aataatgaaggaatcatctcacccc |
234 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
27658524 |
aataatgaaggaatcatctcacccc |
27658500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 773 - 880
Target Start/End: Complemental strand, 33602528 - 33602427
Alignment:
| Q |
773 |
aaaaacatatttaatcgtttaatatttcatttcactatttcgctatttgccagctcatacttctaaccgtttcttattcacttttgccgccatataacaa |
872 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
33602528 |
aaaaacatatttaatcgtttaatatttcatttcat------gctatttgccagctcatacttctaatcgtttcttattcacttttgccgccatataacaa |
33602435 |
T |
 |
| Q |
873 |
accatatt |
880 |
Q |
| |
|
|||||||| |
|
|
| T |
33602434 |
accatatt |
33602427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 750
Target Start/End: Complemental strand, 27656903 - 27656844
Alignment:
| Q |
691 |
tattgagtaatagtgtatggtgtcatttttgtgtttgtatttttgtgtttacttatcatt |
750 |
Q |
| |
|
||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27656903 |
tattgaggaacagtctatggtatcatttttgtgtttgtatttttgtgtttacttatcatt |
27656844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 237; Significance: 1e-130; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 298 - 613
Target Start/End: Original strand, 37605628 - 37605941
Alignment:
| Q |
298 |
tttgggtttaggattttttatcttcttcttatctactaagaatcaaaccaacgtttagcacaacaaggtataacaacaattacaagccactgaaattcta |
397 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37605628 |
tttgggtttaggaatttttttcttcttcttatctactaagaatcaaaccaaagtttagcacaacaaggtataacaacaattacaagccactgaaattcta |
37605727 |
T |
 |
| Q |
398 |
aaaacaagaacagagaaaggaaaaaacctgggtatgaaaacaaggagatgaatatggcgtcgcagccgagacaggcggagtgaccgaaaatagcatgaga |
497 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| |||| ||||||||||||||| || |
|
|
| T |
37605728 |
aaaacaagaacagagaaaggaaaaaacctgggtatgaaaacaaggagaggaatatgaaatcgcagccgagataggtggagcgaccgaaaatagcat--ga |
37605825 |
T |
 |
| Q |
498 |
gggtggtactgtacaaagatgaagaaggagtgacgagaagctatgagtgaatgaaagataatttgttcttgcttataggaaatgagtgaatcagagagag |
597 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||| ||||| |||| |
|
|
| T |
37605826 |
gggtggcactgtacaaagatgaagaaggagtgacgagaacctatgagtgaatgaaagatgattttttcttgctcataggaaatgagtgattcagaaagag |
37605925 |
T |
 |
| Q |
598 |
ggaaggaaaacgaaac |
613 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
37605926 |
ggaaggaaaacgaaac |
37605941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 37605341 - 37605564
Alignment:
| Q |
10 |
aaaatacaagagaaaaattgtaacacaaaattgattatggggtattagatttaagtattagctattttgaagtctataatcatgcaattaagttgagaaa |
109 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
37605341 |
aaaatacaagagaaacattgtaacacaa--ttgattatggggtattagatttaagtattagctgtgttgaagtctataatcatgcaattaagttgagaaa |
37605438 |
T |
 |
| Q |
110 |
attaatattgaacatattcagtatat-aaatcttaatcaacttcatcatttcgtcaattcaaaaatttagggtttttaattagaaatttggggaaaacga |
208 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37605439 |
attaatattgaatatattcagtatataaaaccttaatcaatttcatcatttagtcaattcaaaaatttagggtttttaatttgaaatttggggaaaacga |
37605538 |
T |
 |
| Q |
209 |
aaataatgaaggaatcatctcacccc |
234 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
37605539 |
aaataatgaaggaatcatctcacccc |
37605564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 49 - 234
Target Start/End: Original strand, 33360553 - 33360739
Alignment:
| Q |
49 |
gggtattagatttaagtattagctattttgaagtctataatcatgcaattaagttgagaaaattaatattgaacatattcagtatat-aaatcttaatca |
147 |
Q |
| |
|
|||||| |||||||||||||||| || | |||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| || ||||| |
|
|
| T |
33360553 |
gggtatcagatttaagtattagcaatgtctaagtctgtaatcatgaaattaagttgagaaaattaatattgagcatattcattatataaaacctgaatca |
33360652 |
T |
 |
| Q |
148 |
acttcatcatttcgtcaattcaaaaatttagggtttttaattagaaatttggggaaaacgaaaataatgaaggaatcatctcacccc |
234 |
Q |
| |
|
| ||||| |||| ||||||||||||||||||||||| | ||| ||||| ||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
33360653 |
atttcattatttagtcaattcaaaaatttagggtttgtgatttaaaattgggggaaaacgaaaatgatgaaggaaccatctcacccc |
33360739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 5742984 - 5742798
Alignment:
| Q |
46 |
atggggtattagatttaagtattagctattttgaagtctataatcatgcaattaagttgagaaaattaatattgaacatattcagtatataaatcttaat |
145 |
Q |
| |
|
||||||||| | |||||||||||||| || | |||| | |||||||| |||||||||||||||||||||||||| |||||||| |||| ||| | | |
|
|
| T |
5742984 |
atggggtatcaaatttaagtattagcaatatctaagtttgtaatcatgaaattaagttgagaaaattaatattgagcatattcattataaaaaacct--g |
5742887 |
T |
 |
| Q |
146 |
caacttcatcatttcgtcaattcaaaaatttagggtttttaattagaaatttggggaaaacgaaaataatgaaggaatcatctcacccc |
234 |
Q |
| |
|
||| ||||| |||| ||||||| ||||||||||||||| | ||| |||||| ||||||||||||||| ||||||| | ||||| ||||| |
|
|
| T |
5742886 |
caatttcattatttagtcaattaaaaaatttagggtttgtgatttgaaattgggggaaaacgaaaatgatgaagggaccatcttacccc |
5742798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 337 - 601
Target Start/End: Original strand, 33360837 - 33361104
Alignment:
| Q |
337 |
gaatcaaaccaacgtttagcacaac-aaggtataacaacaattacaagccactgaaattctaaaaacaagaacagagaaaggaaaaaacctgggtatgaa |
435 |
Q |
| |
|
||||||||||||||||| | |||| |||||| ||||| || ||||||| ||| ||||||||||||||||| |||||||||||| |||||| | ||||| |
|
|
| T |
33360837 |
gaatcaaaccaacgttttcctcaaccaaggtaaaacaataactacaagctactaaaattctaaaaacaagagtagagaaaggaaagaacctgagcatgaa |
33360936 |
T |
 |
| Q |
436 |
aacaaggag---------atgaatatggcgtcgcagccgagacaggcggagtgaccgaaaatagcatgagagggtggtactgtacaaagatgaagaagga |
526 |
Q |
| |
|
||| ||||| | ||||| || || | || | ||| ||||||||||||| |||||||||||| ||| |||| |||||||||||| || |
|
|
| T |
33360937 |
aacgaggaggaacagtggaggaatacggtgttacggcgg---cagctggagtgaccgaaa-tagcatgagaggctggcactgcacaaagatgaag---ga |
33361029 |
T |
 |
| Q |
527 |
gtgacgagaagctatgagtgaatgaaagataatttgttcttgcttataggaaatgagtgaatcagagagagggaa |
601 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||||| | || |||||||| ||||||||| |||||||| |
|
|
| T |
33361030 |
gtgacgagaaattattagtgaatgaaagattatttgttcttggtaatgggaaatgactgaatcagaaagagggaa |
33361104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 474 - 601
Target Start/End: Complemental strand, 5742556 - 5742432
Alignment:
| Q |
474 |
ggagtgaccgaaaatagcatgagagggtggtactgtacaaagatgaagaaggagtgacgagaagctatgagtgaatgaaagataatttgttcttgcttat |
573 |
Q |
| |
|
|||||||| | ||||||||||||||||||| |||| |||||||||||| |||||| ||| | ||| |||||||||||||| ||| |||||| || || |
|
|
| T |
5742556 |
ggagtgactggaaatagcatgagagggtggcactgcacaaagatgaag---gagtgatgagcaactactagtgaatgaaagatgattagttctttctcat |
5742460 |
T |
 |
| Q |
574 |
aggaaatgagtgaatcagagagagggaa |
601 |
Q |
| |
|
||||||| ||||||||||| |||||||| |
|
|
| T |
5742459 |
aggaaattagtgaatcagaaagagggaa |
5742432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 691 - 755
Target Start/End: Original strand, 37606029 - 37606093
Alignment:
| Q |
691 |
tattgagtaatagtgtatggtgtcatttttgtgtttgtatttttgtgtttacttatcattcctgt |
755 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37606029 |
tattgagtaacagtgtatggtgtcatatttgtgtttgtattattgtgtttacttatcattcctgt |
37606093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 5742700 - 5742592
Alignment:
| Q |
337 |
gaatcaaaccaacgtttagcacaac-aaggtataacaacaattacaagccactgaaattctaaaaacaagaacagagaaaggaaaaaacctgggtatgaa |
435 |
Q |
| |
|
||||||||| ||||||| | |||| || ||| ||||| || ||||| | ||| ||||||||||||||||| |||||||||||| |||||| | ||||| |
|
|
| T |
5742700 |
gaatcaaacaaacgtttttctcaaccaacgtaaaacaataactacaaactactaaaattctaaaaacaagagtagagaaaggaaagaacctgagcatgaa |
5742601 |
T |
 |
| Q |
436 |
aacaaggag |
444 |
Q |
| |
|
||||||||| |
|
|
| T |
5742600 |
aacaaggag |
5742592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 753
Target Start/End: Complemental strand, 30891806 - 30891764
Alignment:
| Q |
711 |
tgtcatttttgtgtttgtatttttgtgtttacttatcattcct |
753 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30891806 |
tgtcgtttttgtgtttgtatttttgtgttcacttatcattcct |
30891764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 5e-46; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 49 - 234
Target Start/End: Original strand, 18084829 - 18085015
Alignment:
| Q |
49 |
gggtattagatttaagtattagctattttgaagtctataatcatgcaattaagttgagaaaattaatattgaacatattcagtatat-aaatcttaatca |
147 |
Q |
| |
|
|||||| |||||||||||||||| || | |||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| || ||||| |
|
|
| T |
18084829 |
gggtatcagatttaagtattagcaatgtctaagtctgtaatcatgaaattaagttgagaaaattaatattgagcatattcattatataaaacctgaatca |
18084928 |
T |
 |
| Q |
148 |
acttcatcatttcgtcaattcaaaaatttagggtttttaattagaaatttggggaaaacgaaaataatgaaggaatcatctcacccc |
234 |
Q |
| |
|
| ||||| |||| ||||||||||||||||||||||| | ||| ||||| ||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
18084929 |
atttcattatttagtcaattcaaaaatttagggtttgtgatttaaaattgggggaaaacgaaaatgatgaaggaaccatctcacccc |
18085015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 474 - 601
Target Start/End: Original strand, 18085257 - 18085380
Alignment:
| Q |
474 |
ggagtgaccgaaaatagcatgagagggtggtactgtacaaagatgaagaaggagtgacgagaagctatgagtgaatgaaagataatttgttcttgcttat |
573 |
Q |
| |
|
||||||||||||| |||||||||||| ||| |||| |||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||| | || |
|
|
| T |
18085257 |
ggagtgaccgaaa-tagcatgagaggctggcactgcacaaagatgaag---gagtgacgagaaattattagtgaatgaaagattatttgttcttggtaat |
18085352 |
T |
 |
| Q |
574 |
aggaaatgagtgaatcagagagagggaa |
601 |
Q |
| |
|
|||||||| ||||||||| |||||||| |
|
|
| T |
18085353 |
gggaaatgactgaatcagaaagagggaa |
18085380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 691 - 755
Target Start/End: Complemental strand, 31559546 - 31559482
Alignment:
| Q |
691 |
tattgagtaatagtgtatggtgtcatttttgtgtttgtatttttgtgtttacttatcattcctgt |
755 |
Q |
| |
|
|||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
31559546 |
tattgagtaacagtgtatggtgtcatatttatgtttgtattattgtgtttacttatcattcctgt |
31559482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 18085113 - 18085221
Alignment:
| Q |
337 |
gaatcaaaccaacgtttagcacaac-aaggtataacaacaattacaagccactgaaattctaaaaacaagaacagagaaaggaaaaaacctgggtatgaa |
435 |
Q |
| |
|
||||||||||||||||| | |||| |||||| ||||| || ||||||| ||| ||||||||||||||||| |||||||||||| |||||| | ||||| |
|
|
| T |
18085113 |
gaatcaaaccaacgttttcctcaaccaaggtaaaacaataactacaagctactaaaattctaaaaacaagagtagagaaaggaaagaacctgagcatgaa |
18085212 |
T |
 |
| Q |
436 |
aacaaggag |
444 |
Q |
| |
|
||| ||||| |
|
|
| T |
18085213 |
aacgaggag |
18085221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0856 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0856
Description:
Target: scaffold0856; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 49 - 234
Target Start/End: Original strand, 800 - 986
Alignment:
| Q |
49 |
gggtattagatttaagtattagctattttgaagtctataatcatgcaattaagttgagaaaattaatattgaacatattcagtatat-aaatcttaatca |
147 |
Q |
| |
|
|||||| |||||||||||||||| || | |||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| || ||||| |
|
|
| T |
800 |
gggtatcagatttaagtattagcaatgtctaagtctgtaatcatgaaattaagttgagaaaattaatattgagcatattcattatataaaacctgaatca |
899 |
T |
 |
| Q |
148 |
acttcatcatttcgtcaattcaaaaatttagggtttttaattagaaatttggggaaaacgaaaataatgaaggaatcatctcacccc |
234 |
Q |
| |
|
| ||||| |||| || |||||||||||||||||||| | ||| ||||| ||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
900 |
atttcattatttagtaaattcaaaaatttagggtttgtgatttaaaattgggggaaaacgaaaatgatgaaggaaccatctcacccc |
986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0856; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 337 - 601
Target Start/End: Original strand, 1084 - 1351
Alignment:
| Q |
337 |
gaatcaaaccaacgtttagcacaac-aaggtataacaacaattacaagccactgaaattctaaaaacaagaacagagaaaggaaaaaacctgggtatgaa |
435 |
Q |
| |
|
||||||||||||||||| | |||| |||||| ||||| || ||||||| ||| ||||||||||||||||| |||||||||||| |||||| | ||||| |
|
|
| T |
1084 |
gaatcaaaccaacgttttcctcaaccaaggtaaaacaataactacaagctactaaaattctaaaaacaagagtagagaaaggaaagaacctgagcatgaa |
1183 |
T |
 |
| Q |
436 |
aacaaggag---------atgaatatggcgtcgcagccgagacaggcggagtgaccgaaaatagcatgagagggtggtactgtacaaagatgaagaagga |
526 |
Q |
| |
|
||| ||||| | ||||| ||||| | || | ||| ||||||||||||| |||||||||||| ||| |||| |||||||||||| || |
|
|
| T |
1184 |
aacgaggaggaacagtggaggaatacggcgttacggcgg---cagctggagtgaccgaaa-tagcatgagaggctggcactgcacaaagatgaag---ga |
1276 |
T |
 |
| Q |
527 |
gtgacgagaagctatgagtgaatgaaagataatttgttcttgcttataggaaatgagtgaatcagagagagggaa |
601 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||||| | || |||||||| ||||||||| |||||||| |
|
|
| T |
1277 |
gtgacgagaaattattagtgaatgaaagatgatttgttcttgatcatgggaaatgactgaatcagaaagagggaa |
1351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 716 - 753
Target Start/End: Complemental strand, 7453604 - 7453567
Alignment:
| Q |
716 |
tttttgtgtttgtatttttgtgtttacttatcattcct |
753 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7453604 |
tttttgtgtttgtatttttgtgttcacttatcattcct |
7453567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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