View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18858_low_12 (Length: 363)

Name: NF18858_low_12
Description: NF18858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18858_low_12
NF18858_low_12
[»] scaffold0124 (1 HSPs)
scaffold0124 (54-355)||(1496-1797)
[»] chr3 (67 HSPs)
chr3 (54-355)||(2449152-2449453)
chr3 (54-306)||(17912398-17912648)
chr3 (54-287)||(13954804-13955036)
chr3 (54-272)||(45860937-45861154)
chr3 (4-306)||(16743991-16744281)
chr3 (72-272)||(13975654-13975853)
chr3 (140-272)||(51158018-51158150)
chr3 (139-272)||(15859023-15859156)
chr3 (140-272)||(14842561-14842693)
chr3 (140-272)||(12030147-12030279)
chr3 (146-272)||(15936633-15936759)
chr3 (140-272)||(2049941-2050073)
chr3 (144-272)||(13839025-13839153)
chr3 (54-237)||(11986080-11986263)
chr3 (146-272)||(15938475-15938601)
chr3 (6-202)||(19231982-19232169)
chr3 (6-86)||(3992873-3992953)
chr3 (6-86)||(55513193-55513273)
chr3 (11-86)||(15857120-15857195)
chr3 (6-86)||(2844514-2844594)
chr3 (6-86)||(54037976-54038056)
chr3 (152-272)||(55316351-55316471)
chr3 (6-86)||(17955832-17955916)
chr3 (174-287)||(16821256-16821369)
chr3 (6-86)||(7854305-7854385)
chr3 (152-272)||(41270207-41270327)
chr3 (184-264)||(15614973-15615053)
chr3 (25-86)||(45581954-45582016)
chr3 (54-236)||(54651625-54651796)
chr3 (293-339)||(16744436-16744482)
chr3 (156-210)||(14080701-14080756)
chr3 (13-70)||(17205019-17205076)
chr3 (13-86)||(38810868-38810941)
chr3 (13-68)||(12031849-12031904)
chr3 (53-88)||(15615135-15615170)
chr3 (140-186)||(19260823-19260869)
chr3 (13-86)||(13301323-13301396)
chr3 (13-86)||(13311979-13312052)
chr3 (54-91)||(14842487-14842524)
chr3 (13-70)||(17191879-17191936)
chr3 (55-237)||(49232603-49232774)
chr3 (54-86)||(2050115-2050147)
chr3 (54-86)||(16261777-16261809)
chr3 (54-86)||(16933869-16933901)
chr3 (54-86)||(19260749-19260781)
chr3 (54-86)||(23492696-23492728)
chr3 (54-86)||(38168237-38168269)
chr3 (54-86)||(53771365-53771397)
chr3 (55-110)||(1467657-1467712)
chr3 (146-237)||(12264790-12264881)
chr3 (146-237)||(15468338-15468429)
chr3 (146-237)||(25058906-25058997)
chr3 (55-109)||(12812125-12812179)
chr3 (54-237)||(12902007-12902179)
chr3 (13-70)||(3576290-3576347)
chr3 (20-85)||(15550922-15550987)
chr3 (156-236)||(4145814-4145894)
chr3 (54-110)||(5228595-5228651)
chr3 (54-86)||(13839200-13839232)
chr3 (54-86)||(14285289-14285321)
chr3 (54-110)||(18911276-18911332)
chr3 (279-354)||(18969968-18970044)
chr3 (54-86)||(19947026-19947058)
chr3 (54-86)||(30153265-30153297)
chr3 (54-86)||(33342204-33342236)
chr3 (157-236)||(47784767-47784847)
chr3 (54-86)||(51961031-51961063)
[»] chr2 (47 HSPs)
chr2 (54-355)||(14906354-14906655)
chr2 (54-355)||(23820119-23820420)
chr2 (54-355)||(20015059-20015360)
chr2 (53-339)||(19689314-19689600)
chr2 (54-272)||(17396567-17396784)
chr2 (58-312)||(25265307-25265563)
chr2 (6-272)||(20627190-20627445)
chr2 (54-271)||(7507757-7507975)
chr2 (139-306)||(36982440-36982608)
chr2 (140-271)||(462870-463001)
chr2 (6-236)||(43642833-43643053)
chr2 (139-272)||(19794703-19794836)
chr2 (139-272)||(8891373-8891506)
chr2 (141-272)||(24341390-24341521)
chr2 (6-86)||(22275045-22275125)
chr2 (6-86)||(22284278-22284358)
chr2 (6-86)||(19794581-19794661)
chr2 (6-85)||(15633538-15633617)
chr2 (152-272)||(19886661-19886781)
chr2 (13-70)||(43646232-43646289)
chr2 (54-86)||(463043-463075)
chr2 (54-86)||(9652796-9652828)
chr2 (13-65)||(19660221-19660273)
chr2 (54-86)||(22863235-22863267)
chr2 (54-86)||(36982364-36982396)
chr2 (55-110)||(11231256-11231311)
chr2 (146-237)||(12728559-12728650)
chr2 (55-110)||(22513103-22513158)
chr2 (55-110)||(24685699-24685754)
chr2 (55-86)||(25213372-25213403)
chr2 (55-110)||(28775725-28775780)
chr2 (146-237)||(34824642-34824733)
chr2 (13-86)||(19666848-19666921)
chr2 (54-108)||(24341309-24341365)
chr2 (156-236)||(24884852-24884933)
chr2 (13-70)||(25305769-25305826)
chr2 (54-87)||(28031134-28031167)
chr2 (54-122)||(33128335-33128404)
chr2 (157-236)||(68158-68238)
chr2 (54-86)||(8891549-8891581)
chr2 (54-110)||(8944129-8944185)
chr2 (54-110)||(12641559-12641615)
chr2 (54-110)||(12728675-12728731)
chr2 (54-110)||(16935876-16935932)
chr2 (54-110)||(17006536-17006592)
chr2 (54-110)||(34824758-34824814)
chr2 (54-110)||(42177886-42177942)
[»] scaffold0141 (2 HSPs)
scaffold0141 (54-355)||(22588-22889)
scaffold0141 (54-355)||(26843-27144)
[»] chr4 (44 HSPs)
chr4 (54-349)||(16327840-16328135)
chr4 (54-355)||(10488610-10488911)
chr4 (54-306)||(26680297-26680549)
chr4 (54-287)||(13048135-13048368)
chr4 (140-272)||(122020-122152)
chr4 (6-236)||(54118120-54118340)
chr4 (141-272)||(15675090-15675221)
chr4 (141-272)||(10104251-10104382)
chr4 (139-272)||(13246561-13246694)
chr4 (54-115)||(16609013-16609074)
chr4 (167-268)||(31115764-31115865)
chr4 (6-86)||(25119059-25119139)
chr4 (141-213)||(33240890-33240962)
chr4 (156-287)||(10644336-10644467)
chr4 (152-287)||(47357771-47357906)
chr4 (6-86)||(5682380-5682460)
chr4 (293-355)||(26680080-26680142)
chr4 (156-236)||(40885570-40885650)
chr4 (54-167)||(9795453-9795565)
chr4 (13-86)||(41165808-41165881)
chr4 (139-272)||(7850131-7850264)
chr4 (54-167)||(19697278-19697391)
chr4 (54-167)||(19707863-19707976)
chr4 (13-70)||(47534933-47534990)
chr4 (54-86)||(13246737-13246769)
chr4 (54-86)||(14952085-14952117)
chr4 (54-86)||(15135907-15135939)
chr4 (54-86)||(15272211-15272243)
chr4 (54-110)||(17145574-17145630)
chr4 (146-237)||(18169137-18169228)
chr4 (141-172)||(31132545-31132576)
chr4 (54-92)||(7850308-7850346)
chr4 (54-122)||(8045235-8045304)
chr4 (54-108)||(15675009-15675065)
chr4 (54-122)||(16523109-16523178)
chr4 (54-108)||(33240987-33241043)
chr4 (54-86)||(122194-122226)
chr4 (54-110)||(7131982-7132038)
chr4 (54-86)||(10104170-10104202)
chr4 (157-197)||(13809511-13809551)
chr4 (157-236)||(15044994-15045074)
chr4 (54-110)||(15287162-15287218)
chr4 (54-110)||(15294271-15294327)
chr4 (54-110)||(20001006-20001062)
[»] chr8 (48 HSPs)
chr8 (54-355)||(5238135-5238436)
chr8 (54-355)||(24661162-24661463)
chr8 (54-355)||(43685594-43685895)
chr8 (54-306)||(22907128-22907380)
chr8 (56-272)||(17345700-17345917)
chr8 (6-236)||(16404852-16405071)
chr8 (140-272)||(16193716-16193848)
chr8 (139-272)||(43373467-43373600)
chr8 (140-272)||(24928791-24928923)
chr8 (152-272)||(6774258-6774378)
chr8 (156-272)||(21844576-21844692)
chr8 (152-272)||(24549113-24549233)
chr8 (6-86)||(274766-274846)
chr8 (6-86)||(641003-641083)
chr8 (6-86)||(826809-826889)
chr8 (156-272)||(21851969-21852085)
chr8 (6-86)||(24716714-24716794)
chr8 (152-272)||(30120854-30120974)
chr8 (152-272)||(16674392-16674512)
chr8 (293-355)||(22907535-22907597)
chr8 (6-86)||(39115598-39115678)
chr8 (54-167)||(2545183-2545297)
chr8 (13-70)||(17285543-17285600)
chr8 (13-70)||(21198005-21198062)
chr8 (156-236)||(26011660-26011741)
chr8 (54-86)||(24385652-24385684)
chr8 (54-86)||(43373392-43373424)
chr8 (55-110)||(271278-271333)
chr8 (55-110)||(644587-644642)
chr8 (55-110)||(830322-830377)
chr8 (55-110)||(15319077-15319132)
chr8 (55-110)||(15499446-15499501)
chr8 (146-237)||(16195398-16195489)
chr8 (146-237)||(22006256-22006347)
chr8 (156-210)||(23226076-23226131)
chr8 (117-167)||(18612643-18612693)
chr8 (117-167)||(22147675-22147725)
chr8 (54-122)||(3431176-3431245)
chr8 (156-197)||(23149985-23150026)
chr8 (215-287)||(222754-222826)
chr8 (215-287)||(736377-736449)
chr8 (215-287)||(860272-860344)
chr8 (54-110)||(13662182-13662238)
chr8 (54-110)||(13720845-13720901)
chr8 (54-110)||(16872968-16873024)
chr8 (157-236)||(17285370-17285450)
chr8 (54-86)||(22886654-22886686)
chr8 (54-86)||(24928716-24928748)
[»] chr7 (58 HSPs)
chr7 (54-355)||(15441478-15441779)
chr7 (54-355)||(30262043-30262344)
chr7 (54-355)||(11516275-11516576)
chr7 (54-306)||(7293113-7293365)
chr7 (54-272)||(25292252-25292470)
chr7 (54-182)||(14113903-14114031)
chr7 (54-271)||(47480944-47481162)
chr7 (54-182)||(14423554-14423681)
chr7 (54-237)||(13321182-13321366)
chr7 (140-272)||(16211897-16212029)
chr7 (146-272)||(18253841-18253967)
chr7 (139-272)||(11580738-11580871)
chr7 (139-272)||(13037013-13037146)
chr7 (139-272)||(36052795-36052928)
chr7 (140-268)||(3060101-3060229)
chr7 (158-272)||(16478968-16479082)
chr7 (156-272)||(13572808-13572924)
chr7 (6-86)||(32493898-32493978)
chr7 (13-86)||(3060271-3060344)
chr7 (6-86)||(126738-126818)
chr7 (152-272)||(10989541-10989661)
chr7 (146-271)||(2437590-2437715)
chr7 (6-86)||(1936869-1936949)
chr7 (152-264)||(13911024-13911136)
chr7 (6-86)||(111121-111201)
chr7 (139-268)||(295965-296094)
chr7 (6-85)||(7283908-7283987)
chr7 (293-355)||(7292896-7292958)
chr7 (13-86)||(13377851-13377924)
chr7 (13-70)||(13389693-13389750)
chr7 (146-236)||(48622664-48622754)
chr7 (156-236)||(16914928-16915009)
chr7 (54-86)||(2029244-2029276)
chr7 (54-86)||(16212071-16212103)
chr7 (13-69)||(16919870-16919926)
chr7 (54-86)||(36052971-36053003)
chr7 (54-86)||(42056188-42056220)
chr7 (55-110)||(7823011-7823066)
chr7 (55-110)||(7830322-7830377)
chr7 (146-237)||(15950789-15950880)
chr7 (146-237)||(18980019-18980110)
chr7 (55-110)||(27101555-27101610)
chr7 (55-110)||(27108903-27108958)
chr7 (55-110)||(27176716-27176771)
chr7 (55-110)||(38783647-38783702)
chr7 (54-122)||(371380-371449)
chr7 (156-236)||(9611474-9611555)
chr7 (156-236)||(9839045-9839126)
chr7 (54-86)||(3049905-3049937)
chr7 (54-86)||(11580661-11580693)
chr7 (157-236)||(13377695-13377775)
chr7 (54-110)||(13758653-13758709)
chr7 (54-110)||(14250815-14250871)
chr7 (58-86)||(15516765-15516793)
chr7 (54-110)||(15760031-15760087)
chr7 (54-110)||(15927851-15927907)
chr7 (54-110)||(18979938-18979994)
chr7 (54-86)||(25124450-25124482)
[»] chr5 (46 HSPs)
chr5 (54-355)||(16536245-16536546)
chr5 (54-355)||(20623017-20623318)
chr5 (54-355)||(21233442-21233743)
chr5 (54-355)||(37052792-37053093)
chr5 (54-355)||(25900320-25900620)
chr5 (54-272)||(34939408-34939627)
chr5 (140-272)||(23507096-23507228)
chr5 (141-271)||(18531068-18531198)
chr5 (141-272)||(22053834-22053965)
chr5 (139-272)||(27182546-27182679)
chr5 (152-272)||(29188284-29188404)
chr5 (53-237)||(32950861-32951045)
chr5 (156-270)||(27009975-27010089)
chr5 (152-287)||(22366481-22366616)
chr5 (155-272)||(43443398-43443515)
chr5 (155-287)||(18777995-18778127)
chr5 (152-272)||(19500031-19500151)
chr5 (152-272)||(25426760-25426880)
chr5 (152-287)||(4199985-4200120)
chr5 (152-272)||(12506-12626)
chr5 (152-272)||(21073595-21073715)
chr5 (11-85)||(11584374-11584448)
chr5 (55-110)||(36989688-36989743)
chr5 (13-86)||(5450695-5450768)
chr5 (13-70)||(21222462-21222519)
chr5 (156-236)||(21310709-21310790)
chr5 (156-236)||(29918131-29918212)
chr5 (54-86)||(16105967-16105999)
chr5 (54-86)||(23507270-23507302)
chr5 (146-237)||(10777968-10778059)
chr5 (55-110)||(11211983-11212038)
chr5 (55-110)||(21932299-21932354)
chr5 (55-110)||(21938469-21938524)
chr5 (146-237)||(23514728-23514819)
chr5 (55-110)||(35582319-35582374)
chr5 (117-167)||(17909742-17909792)
chr5 (54-122)||(108728-108797)
chr5 (54-122)||(9730278-9730347)
chr5 (156-236)||(19862375-19862456)
chr5 (156-197)||(23981516-23981557)
chr5 (54-110)||(1219437-1219493)
chr5 (54-110)||(7425607-7425663)
chr5 (54-86)||(22053753-22053785)
chr5 (54-110)||(23514844-23514900)
chr5 (54-86)||(27182471-27182503)
chr5 (54-110)||(35791015-35791071)
[»] chr1 (32 HSPs)
chr1 (54-355)||(51452540-51452841)
chr1 (4-272)||(41394353-41394609)
chr1 (140-287)||(20931461-20931608)
chr1 (142-272)||(20913161-20913291)
chr1 (139-236)||(20445846-20445943)
chr1 (139-272)||(20893625-20893758)
chr1 (139-236)||(37844449-37844546)
chr1 (139-236)||(20531611-20531708)
chr1 (152-272)||(2116386-2116506)
chr1 (6-86)||(21860334-21860414)
chr1 (152-272)||(45051554-45051674)
chr1 (12-86)||(44034829-44034903)
chr1 (146-271)||(22227941-22228066)
chr1 (146-271)||(22232638-22232763)
chr1 (152-272)||(5072388-5072508)
chr1 (152-272)||(18601118-18601238)
chr1 (6-86)||(41218728-41218808)
chr1 (13-84)||(27675120-27675191)
chr1 (53-88)||(45051724-45051759)
chr1 (13-70)||(13376711-13376768)
chr1 (13-70)||(20177513-20177570)
chr1 (54-86)||(37844374-37844406)
chr1 (55-86)||(15861327-15861358)
chr1 (55-110)||(17004921-17004976)
chr1 (55-110)||(19962417-19962472)
chr1 (156-197)||(22143361-22143402)
chr1 (55-100)||(38055009-38055054)
chr1 (54-86)||(20445987-20446019)
chr1 (54-86)||(20893551-20893583)
chr1 (54-86)||(20913335-20913367)
chr1 (54-86)||(20931650-20931682)
chr1 (54-90)||(46523691-46523727)
[»] scaffold0078 (3 HSPs)
scaffold0078 (54-302)||(36980-37228)
scaffold0078 (6-86)||(41632-41712)
scaffold0078 (297-348)||(37391-37442)
[»] scaffold0772 (1 HSPs)
scaffold0772 (54-272)||(5660-5878)
[»] scaffold0132 (2 HSPs)
scaffold0132 (54-312)||(13596-13856)
scaffold0132 (6-86)||(42677-42754)
[»] chr6 (47 HSPs)
chr6 (58-312)||(35009356-35009612)
chr6 (54-272)||(1657661-1657880)
chr6 (54-272)||(15862602-15862821)
chr6 (54-223)||(27751605-27751774)
chr6 (139-272)||(23153578-23153711)
chr6 (140-271)||(14626118-14626249)
chr6 (152-272)||(1650105-1650225)
chr6 (6-86)||(19983144-19983224)
chr6 (6-86)||(35015009-35015089)
chr6 (152-287)||(25175680-25175815)
chr6 (152-287)||(27653983-27654118)
chr6 (140-237)||(29666040-29666137)
chr6 (6-86)||(18583640-18583720)
chr6 (152-277)||(16825752-16825879)
chr6 (13-70)||(21623506-21623563)
chr6 (53-88)||(1650020-1650055)
chr6 (156-236)||(18629608-18629689)
chr6 (13-70)||(22361619-22361676)
chr6 (13-85)||(14152632-14152704)
chr6 (54-167)||(16299886-16299999)
chr6 (54-86)||(18002395-18002427)
chr6 (54-86)||(23995247-23995279)
chr6 (54-86)||(26090059-26090091)
chr6 (156-236)||(29605616-29605696)
chr6 (146-237)||(1556172-1556263)
chr6 (55-86)||(4991396-4991427)
chr6 (55-110)||(10488982-10489037)
chr6 (146-237)||(16232059-16232150)
chr6 (55-110)||(16376291-16376346)
chr6 (55-110)||(16383615-16383670)
chr6 (55-110)||(16556057-16556112)
chr6 (55-110)||(16632613-16632668)
chr6 (156-210)||(16887792-16887847)
chr6 (158-229)||(17083200-17083271)
chr6 (55-110)||(19299520-19299575)
chr6 (156-210)||(35136013-35136068)
chr6 (54-84)||(15742120-15742150)
chr6 (117-167)||(19629567-19629617)
chr6 (54-122)||(18823283-18823352)
chr6 (54-122)||(18839138-18839207)
chr6 (156-197)||(33324898-33324939)
chr6 (54-110)||(1556288-1556344)
chr6 (54-110)||(13620711-13620767)
chr6 (54-110)||(16232175-16232231)
chr6 (54-86)||(23148303-23148335)
chr6 (54-86)||(23153754-23153786)
chr6 (54-86)||(32276659-32276691)
[»] scaffold0125 (1 HSPs)
scaffold0125 (54-312)||(41738-41997)
[»] scaffold0162 (5 HSPs)
scaffold0162 (54-272)||(8092-8312)
scaffold0162 (139-270)||(26414-26545)
scaffold0162 (54-93)||(26340-26379)
scaffold0162 (13-70)||(6877-6934)
scaffold0162 (54-160)||(11989-12095)
[»] scaffold0075 (1 HSPs)
scaffold0075 (54-236)||(34373-34556)
[»] scaffold0266 (4 HSPs)
scaffold0266 (140-272)||(1255-1387)
scaffold0266 (143-272)||(3585-3714)
scaffold0266 (54-86)||(1430-1462)
scaffold0266 (54-93)||(3508-3547)
[»] scaffold0175 (2 HSPs)
scaffold0175 (140-287)||(956-1103)
scaffold0175 (54-91)||(882-919)
[»] scaffold0049 (2 HSPs)
scaffold0049 (58-272)||(48318-48532)
scaffold0049 (6-85)||(20493-20572)
[»] scaffold0195 (2 HSPs)
scaffold0195 (139-272)||(19337-19470)
scaffold0195 (140-272)||(21421-21553)
[»] scaffold0302 (2 HSPs)
scaffold0302 (140-287)||(12229-12376)
scaffold0302 (54-86)||(12418-12450)
[»] scaffold0413 (2 HSPs)
scaffold0413 (140-272)||(6064-6196)
scaffold0413 (54-91)||(5990-6027)
[»] scaffold0077 (3 HSPs)
scaffold0077 (139-287)||(36912-37060)
scaffold0077 (6-85)||(15319-15398)
scaffold0077 (53-86)||(36836-36869)
[»] scaffold0023 (5 HSPs)
scaffold0023 (140-272)||(48729-48861)
scaffold0023 (174-287)||(36210-36323)
scaffold0023 (54-86)||(48903-48935)
scaffold0023 (54-122)||(61122-61191)
scaffold0023 (54-110)||(153924-153980)
[»] scaffold0018 (1 HSPs)
scaffold0018 (140-272)||(51182-51314)
[»] scaffold0025 (3 HSPs)
scaffold0025 (141-272)||(8980-9111)
scaffold0025 (143-272)||(148852-148981)
scaffold0025 (54-86)||(146906-146938)
[»] scaffold1542 (1 HSPs)
scaffold1542 (139-236)||(533-630)
[»] scaffold0011 (1 HSPs)
scaffold0011 (139-272)||(123163-123296)
[»] scaffold0218 (1 HSPs)
scaffold0218 (139-272)||(5060-5193)
[»] scaffold0028 (4 HSPs)
scaffold0028 (139-236)||(89453-89550)
scaffold0028 (139-191)||(107783-107835)
scaffold0028 (156-210)||(79731-79786)
scaffold0028 (55-86)||(130880-130911)
[»] scaffold0106 (2 HSPs)
scaffold0106 (140-272)||(41860-41992)
scaffold0106 (54-86)||(42034-42066)
[»] scaffold0008 (3 HSPs)
scaffold0008 (140-236)||(128169-128265)
scaffold0008 (174-264)||(31697-31787)
scaffold0008 (54-108)||(128095-128147)
[»] scaffold0001 (4 HSPs)
scaffold0001 (140-287)||(172021-172168)
scaffold0001 (140-287)||(177724-177871)
scaffold0001 (54-86)||(172210-172242)
scaffold0001 (54-86)||(177913-177945)
[»] scaffold0026 (3 HSPs)
scaffold0026 (146-272)||(107878-108004)
scaffold0026 (156-272)||(64527-64648)
scaffold0026 (155-197)||(89863-89905)
[»] scaffold0012 (3 HSPs)
scaffold0012 (139-272)||(247441-247574)
scaffold0012 (54-130)||(34075-34150)
scaffold0012 (54-86)||(247366-247398)
[»] scaffold0498 (2 HSPs)
scaffold0498 (140-272)||(9009-9141)
scaffold0498 (54-108)||(9163-9215)
[»] scaffold0420 (1 HSPs)
scaffold0420 (152-272)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (156-272)||(167-283)
scaffold0116 (6-86)||(30417-30497)
[»] scaffold0034 (1 HSPs)
scaffold0034 (6-86)||(80187-80267)
[»] scaffold0361 (1 HSPs)
scaffold0361 (54-233)||(3360-3536)
[»] scaffold0529 (1 HSPs)
scaffold0529 (146-272)||(3094-3220)
[»] scaffold0215 (2 HSPs)
scaffold0215 (174-272)||(9371-9469)
scaffold0215 (174-272)||(16269-16367)
[»] scaffold0184 (1 HSPs)
scaffold0184 (6-86)||(31132-31212)
[»] scaffold0084 (1 HSPs)
scaffold0084 (61-237)||(56020-56196)
[»] scaffold0076 (2 HSPs)
scaffold0076 (175-287)||(43114-43226)
scaffold0076 (55-110)||(39386-39441)
[»] scaffold0016 (3 HSPs)
scaffold0016 (6-86)||(166116-166196)
scaffold0016 (12-86)||(162036-162110)
scaffold0016 (13-86)||(116410-116483)
[»] scaffold0009 (2 HSPs)
scaffold0009 (140-287)||(272141-272288)
scaffold0009 (54-86)||(272330-272362)
[»] scaffold0686 (2 HSPs)
scaffold0686 (12-86)||(5735-5809)
scaffold0686 (12-86)||(5941-6015)
[»] scaffold0022 (2 HSPs)
scaffold0022 (190-271)||(5254-5335)
scaffold0022 (157-197)||(102923-102963)
[»] scaffold1711 (1 HSPs)
scaffold1711 (152-272)||(1304-1424)
[»] scaffold0139 (2 HSPs)
scaffold0139 (174-272)||(14083-14181)
scaffold0139 (146-269)||(21110-21233)
[»] scaffold0342 (1 HSPs)
scaffold0342 (6-86)||(304-384)
[»] scaffold1164 (1 HSPs)
scaffold1164 (6-85)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (6-85)||(19802-19881)
scaffold0122 (6-85)||(24106-24185)
[»] scaffold0369 (1 HSPs)
scaffold0369 (190-271)||(3854-3936)
[»] scaffold0032 (5 HSPs)
scaffold0032 (54-167)||(13267-13379)
scaffold0032 (54-86)||(55904-55936)
scaffold0032 (54-86)||(108075-108107)
scaffold0032 (156-197)||(93773-93814)
scaffold0032 (156-223)||(104623-104691)
[»] scaffold0876 (1 HSPs)
scaffold0876 (15-85)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (11-85)||(6261-6335)
scaffold0310 (48-85)||(4-41)
[»] scaffold0467 (1 HSPs)
scaffold0467 (54-237)||(10256-10428)
[»] scaffold0507 (1 HSPs)
scaffold0507 (13-86)||(1363-1436)
[»] scaffold0123 (1 HSPs)
scaffold0123 (156-236)||(8176-8257)
[»] scaffold0066 (3 HSPs)
scaffold0066 (54-237)||(45197-45370)
scaffold0066 (190-237)||(54583-54630)
scaffold0066 (54-109)||(54701-54756)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-70)||(35816-35873)
[»] scaffold0058 (2 HSPs)
scaffold0058 (156-209)||(70307-70361)
scaffold0058 (54-86)||(57392-57424)
[»] scaffold1295 (1 HSPs)
scaffold1295 (13-70)||(442-499)
[»] scaffold0456 (2 HSPs)
scaffold0456 (156-197)||(1546-1587)
scaffold0456 (156-197)||(8691-8732)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-70)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (53-86)||(193396-193429)
[»] scaffold0761 (1 HSPs)
scaffold0761 (54-110)||(1492-1548)
[»] scaffold0706 (1 HSPs)
scaffold0706 (54-86)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (54-86)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (54-86)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (54-86)||(13285-13317)
[»] scaffold0409 (2 HSPs)
scaffold0409 (156-234)||(1348-1427)
scaffold0409 (156-234)||(9603-9682)
[»] scaffold0213 (1 HSPs)
scaffold0213 (55-110)||(29445-29500)
[»] scaffold0107 (1 HSPs)
scaffold0107 (55-110)||(31592-31647)
[»] scaffold0389 (1 HSPs)
scaffold0389 (157-210)||(10854-10908)
[»] scaffold0151 (1 HSPs)
scaffold0151 (156-209)||(22422-22476)
[»] scaffold1272 (1 HSPs)
scaffold1272 (13-70)||(632-689)
[»] scaffold0700 (1 HSPs)
scaffold0700 (156-236)||(2691-2772)
[»] scaffold0483 (1 HSPs)
scaffold0483 (13-70)||(6999-7056)
[»] scaffold0367 (1 HSPs)
scaffold0367 (54-122)||(17209-17278)
[»] scaffold0173 (1 HSPs)
scaffold0173 (54-87)||(5548-5581)
[»] scaffold0138 (1 HSPs)
scaffold0138 (156-236)||(22429-22510)
[»] scaffold0080 (1 HSPs)
scaffold0080 (13-70)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (13-70)||(31357-31414)
[»] scaffold1500 (1 HSPs)
scaffold1500 (54-110)||(1431-1487)
[»] scaffold0335 (1 HSPs)
scaffold0335 (54-86)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (54-86)||(4346-4378)
[»] scaffold0243 (1 HSPs)
scaffold0243 (157-236)||(2317-2397)
[»] scaffold0234 (1 HSPs)
scaffold0234 (54-86)||(17304-17336)
[»] scaffold0207 (1 HSPs)
scaffold0207 (54-86)||(18026-18058)
[»] scaffold0118 (1 HSPs)
scaffold0118 (54-86)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (54-86)||(12418-12450)


Alignment Details
Target: scaffold0124 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 1496 - 1797
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1496 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 1595  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1596 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 1695  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1696 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 1795  T
Q  354 gt 355  Q
    ||    
T  1796 gt 1797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 2449152 - 2449453
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449152 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 2449251  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449252 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 2449351  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2449352 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 2449451  T
Q  354 gt 355  Q
    ||    
T  2449452 gt 2449453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 54 - 306
Target Start/End: Original strand, 17912398 - 17912648
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  17912398 taaggtaagggggttagtctttatcataatcatgttcatttattgcaatttt-cattatttgtatgaaatgggttgaaatgaatgaatggataattgttg 17912496  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  17912497 ctaaattcgtgctccaactt-gatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatga 17912595  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaatt 306  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  17912596 aaagttatgaaaattgtgcaaaattgatgaatttgatatgttgtagttgaatt 17912648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 54 - 287
Target Start/End: Original strand, 13954804 - 13955036
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  13954804 taaggtaagggggttagtctttaccataatcatgttcattctttgcaatttttcatgaattgtatgaaatgggttgaaaggaatgaatggataattgttg 13954903  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||  |||||||||||| |||| || |||||||    
T  13954904 ctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaaataagtaaaaatga 13955002  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaattt 287  Q
      ||||||||| |||||||  ||| |||||||||    
T  13955003 tcagttatgaatattgtgctcaattgatgaattt 13955036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 54 - 272
Target Start/End: Complemental strand, 45861154 - 45860937
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  45861154 taaggtaagggggttagtctttaccataatcatattcattctttgcaatttttcatgaattgtatgaaatgggttgaaaggaatgaatggataattgttg 45861055  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||  |||||||||||| |||| || |||||||    
T  45861054 ctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaaataagtaaaaatga 45860956  T
Q  254 aaagttatgaaaattgtgc 272  Q
     |||||||||| |||||||    
T  45860955 taagttatgaatattgtgc 45860937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 4 - 306
Target Start/End: Original strand, 16743991 - 16744281
Alignment:
Q  4 ggagaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatt 103  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||  |||||  ||| || |    
T  16743991 ggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaacgaggttagtctttaccataatcatcatcatt--ttgtaaat 16744088  T
Q  104 tttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgata 203  Q
    |||||    ||| ||||| |         ||| |  |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16744089 tttcaaatgttgtatgaattt--------tgatt--atggatgattgttgttaaattcgtgctccaactttgatgatatgtttgtatccatgaattgata 16744178  T
Q  204 ataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttga 303  Q
    |||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  16744179 ataagtgtatgattgttggttaaattacatttttaaatatgtaaaaatgaaaagttatgaaaattgtgcaaaatggatgaatttgacatgttatagttga 16744278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 72 - 272
Target Start/End: Original strand, 13975654 - 13975853
Alignment:
Q  72 ctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaac 171  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13975654 ctttaccataatcatgttcattctttgcaatttttcatgaattgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctccaac 13975753  T
Q  172 tttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 271  Q
    |||||||||||| |||||||||||||||| | || |||||||||||||||||  |||||||||||| |||| || ||||||| |||||||||| ||||||    
T  13975754 tttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaaataagtaaaaatgataagttatgaatattgtg 13975852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 51158018 - 51158150
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  51158018 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 51158117  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  51158118 atatgtaaaaatgataagttgtgaaaattgtgc 51158150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 15859023 - 15859156
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  15859023 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 15859122  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||||   |||||| ||||| ||||||||||||    
T  15859123 aatatgaacaaatgataagttgtgaaaattgtgc 15859156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 14842561 - 14842693
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||||  |    
T  14842561 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgaagataattgtatgattgttggtgaaattgcatgttcaa 14842660  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    || ||| ||||||| ||||||||||||||||||    
T  14842661 atgtgtaaaaatgataagttatgaaaattgtgc 14842693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 12030147 - 12030279
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  12030147 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 12030246  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||| ||| ||||| ||||| ||||||    
T  12030247 atatgtaaaagtgataagttgtgaaagttgtgc 12030279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 15936633 - 15936759
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||    
T  15936633 aattgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgt 15936732  T
Q  246 gaaaatgaaaagttatgaaaattgtgc 272  Q
     ||||||| ||||| ||||||||||||    
T  15936733 aaaaatgataagttgtgaaaattgtgc 15936759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 2050073 - 2049941
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  2050073 atggataattgttgctaaattcgtgctccaactgtgacgatatgtttgtatgcctgaattgatgataattgtaagattgttggtgaaattacatgttcaa 2049974  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| || |||| || || ||||||||||||    
T  2049973 atatgtaaacatgataacttgtgaaaattgtgc 2049941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 13839153 - 13839025
Alignment:
Q  144 ataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatat 243  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||  ||||     
T  13839153 ataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgatggtgaaattacatgttcaaatag 13839054  T
Q  244 gtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |   |||||| ||||| ||||||||||||    
T  13839053 gaacaaatgataagttgtgaaaattgtgc 13839025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 237
Target Start/End: Original strand, 11986080 - 11986263
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||| |||||||||||||||| |  |||||| || || |   ||| ||||||||||||||   |||||||| |||||||||||    
T  11986080 taaggtaagggggttagtcttcatcataatcatgttcaattattgcaacttctcctttgttgtatgaaatgggttgattggaatgaattgataattgttg 11986179  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
     ||||||||||||| |||| ||||| ||| || || ||||||| || || |||||||||||||||| | | |||||||||||||    
T  11986180 ttaaattcgtgctctaactgtgatgttattttcgtgtgcatgatttaatgataattgtatgattgtggttgaaattacatgttt 11986263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 15938475 - 15938601
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    ||||||| |||||| |||||||||||| | ||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||    
T  15938475 aattgttactaaatacgtgctccaactgtaatgatatgtttgtaatcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgt 15938574  T
Q  246 gaaaatgaaaagttatgaaaattgtgc 272  Q
     ||||||| ||||| ||||||||||||    
T  15938575 aaaaatgataagttgtgaaaattgtgc 15938601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 19232169 - 19231982
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttt 105  Q
    |||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||  ||||| | || || |||    
T  19232169 agaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcttaatcatcatcattttgtg-aaattt 19232071  T
Q  106 tcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 202  Q
    |||    ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  19232070 tcaaatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttatattcatgaattgat 19231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3992953 - 3992873
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  3992953 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 3992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 55513273 - 55513193
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  55513273 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 55513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 15857120 - 15857195
Alignment:
Q  11 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  15857120 cataggagctaaagtgaagctagagctaatacttggagataattaaggtaagggggttagtcttcatcataatcat 15857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 2844594 - 2844514
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  2844594 agaatcataggagcaaaagtgaagctagagctaatagtttgagataattaaggtaagggggttagtttttatcataatcat 2844514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 54037976 - 54038056
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  54037976 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcat 54038056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 55316471 - 55316351
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  55316471 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 55316372  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  55316371 gataagttatgaatattgtgc 55316351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 17955832 - 17955916
Alignment:
Q  6 agaagcataggagctaaagtgaagctag----agctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17955832 agaatcataggagcaaaagtgaagctaggtagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 17955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 16821369 - 16821256
Alignment:
Q  174 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 273  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||  ||| |||||  |||||||     
T  16821369 tgatgttatgtttgtatgcataaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagctatgagtattgtgct 16821270  T
Q  274 aaatggatgaattt 287  Q
    |||| | |||||||    
T  16821269 aaattggtgaattt 16821256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 7854385 - 7854305
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || |||||||||||    
T  7854385 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcataatcat 7854305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 41270327 - 41270207
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || ||||||||||||||||  |||||||||||   |||||  |||||    
T  41270327 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtggaattacatgttcatatatgcaaaaat 41270228  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  41270227 gataagttatgaatattgtgc 41270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 15615053 - 15614973
Alignment:
Q  184 tttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaa 264  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||    
T  15615053 tttgtatgcatgaattgatgataattgtaggattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaa 15614973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 45582016 - 45581954
Alignment:
Q  25 tgaagctagagctagtagttggagataattaaggtaag-ggggttagtctttatcataatcat 86  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45582016 tgaagctagagctaatagttggagataattaaggtaaggggggttagtttttatcataatcat 45581954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 236
Target Start/End: Complemental strand, 54651796 - 54651625
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||||  ||| |||||| ||||||||          || |||||||||    
T  54651796 taaggtaagggggtttgtcttcatcataatcatgttcaatttttgcaatttctcatg--ttgtatgaaaatgggttga----------tgaataattgtt 54651709  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||||||||||||||||  || ||||| ||||||    
T  54651708 gctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgataattgtatgattgtgagtgaaattgcatgtt 54651625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 339
Target Start/End: Original strand, 16744436 - 16744482
Alignment:
Q  293 gttgttgttgaattatgatggagggtatgattatatgttatgattgt 339  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16744436 gttgttgttgaattatgatggagtgtatgattatatgttatgattgt 16744482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 14080756 - 14080701
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 210  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  14080756 aaattcgtgctccaactatgatgatatgtttgtatgcatgaaattgatgataattg 14080701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17205076 - 17205019
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  17205076 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 17205019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 38810868 - 38810941
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| ||||| |||||||||||||||||  || |||||||||||    
T  38810868 taggagctaaagtgaagcttgggctaggaattggtgataactaaggtaagggggttagaattcatcataatcat 38810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12031904 - 12031849
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtt 68  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||    
T  12031904 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggtt 12031849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 15615170 - 15615135
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatgt 88  Q
    ||||||||||||||||||||||||||||||||||||    
T  15615170 ttaaggtaagggggttagtctttatcataatcatgt 15615135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 19260823 - 19260869
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgttt 186  Q
    |||||||||||||||||||||||||||| || | |||||||||||||    
T  19260823 atggataattgttgctaaattcgtgctctaattatgatgatatgttt 19260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 13301323 - 13301396
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  13301323 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 13301396  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 13311979 - 13312052
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  13311979 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 13312052  T

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Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 14842487 - 14842524
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttca 91  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14842487 taaggtaagggggttagtctttatcataatcatcttca 14842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17191936 - 17191879
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  17191936 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 17191879  T

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Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 237
Target Start/End: Complemental strand, 49232774 - 49232603
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||  ||| |||||| ||||||||          || | ||||||||    
T  49232774 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg--ttgtatgaaaatgggttga----------tgaacaattgttg 49232687  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  49232686 ctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 49232603  T

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Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2050147 - 2050115
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  2050147 taaggtaagggggttagtctttatcataatcat 2050115  T

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Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16261809 - 16261777
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16261809 taaggtaagggggttagtctttatcataatcat 16261777  T

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Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16933869 - 16933901
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16933869 taaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 19260749 - 19260781
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  19260749 taaggtaagggggttagtctttatcataatcat 19260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23492728 - 23492696
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  23492728 taaggtaagggggttagtctttatcataatcat 23492696  T

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Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 38168269 - 38168237
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  38168269 taaggtaagggggttagtctttatcataatcat 38168237  T

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Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 53771397 - 53771365
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  53771397 taaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 1467657 - 1467712
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  1467657 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 1467712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 12264790 - 12264881
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  12264790 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 12264881  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 15468338 - 15468429
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  15468338 aattgttgctaaattcgtgctcttgctatgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 15468429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 25058997 - 25058906
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  25058997 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 25058906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 12812179 - 12812125
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcat 109  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| ||||    
T  12812179 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcat 12812125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 237
Target Start/End: Original strand, 12902007 - 12902179
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||  ||| |||||| ||||||||          || |||||| ||    
T  12902007 taaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg--ttgtatgaaaatgggttga----------tgaataattttt 12902094  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    |||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  12902095 gctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 12902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 3576290 - 3576347
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||| | || | |||||||||||||||||||||||    
T  3576290 taggaggtaaagtgaagcttgggctaggaatttgtgataattaaggtaagggggttag 3576347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 15550987 - 15550922
Alignment:
Q  20 taaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||||||||||| | ||||| | |||| |||||||||| ||||||||||||  || ||||||||||    
T  15550987 taaagtgaagcttgggctaggaattggtgataattaagataagggggttagaattcatcataatca 15550922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 4145814 - 4145894
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||| |||||| | || ||||||||||| || ||||||||| | ||||||| ||  |||||| | ||||||||||||    
T  4145814 aaattcgtactccaattatggtgatatgtttgaatacatgaattggtgataattgaattgttgttgatgaaattacatgtt 4145894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 5228651 - 5228595
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||    
T  5228651 taaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg 5228595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 13839232 - 13839200
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  13839232 taaggtaagggggttagtcttcatcataatcat 13839200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 14285321 - 14285289
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  14285321 taaggtaagggggttagtcttcatcataatcat 14285289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 18911332 - 18911276
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  18911332 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 18911276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 18970044 - 18969968
Alignment:
Q  279 gatgaatt-tgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgatg 354  Q
    |||||||| |||||||||||||||||||| |||||||  | ||||||||| ||| || ||||  ||||||| |||||    
T  18970044 gatgaattatgacatgttgttgttgaattctgatggaaagcatgattataagttgtggttgtggttgattgttgatg 18969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 19947058 - 19947026
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  19947058 taaggtaagggggttagtcttcatcataatcat 19947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 30153297 - 30153265
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||| ||||||||||||||    
T  30153297 taaggtaagggggttagtttttatcataatcat 30153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 33342236 - 33342204
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||| |||||||||||||||||||||||    
T  33342236 taaggtaagagggttagtctttatcataatcat 33342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 47784767 - 47784847
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||||||||| || | |||||||||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  47784767 aattcgtgctctaattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 47784847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 51961031 - 51961063
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  51961031 taaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 298; Significance: 1e-167; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 14906354 - 14906655
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906354 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 14906453  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906454 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 14906553  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14906554 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 14906653  T
Q  354 gt 355  Q
    ||    
T  14906654 gt 14906655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 23820420 - 23820119
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820420 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 23820321  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23820320 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 23820221  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23820220 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 23820121  T
Q  354 gt 355  Q
    ||    
T  23820120 gt 23820119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 20015360 - 20015059
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  20015360 taaggtaagggggttagtctttatcatgatcatgttcattctttgcaatttttcatgatttagatgaaattggttgaaatgaatgaatggataattgttg 20015261  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20015260 ctaaattcgtgctccaactttgatgatatgtttgcatgcatgaattgataataattgtgtgattgttggttaaattacatgtttgaatatgtgaaaatga 20015161  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20015160 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 20015061  T
Q  354 gt 355  Q
    ||    
T  20015060 gt 20015059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 53 - 339
Target Start/End: Original strand, 19689314 - 19689600
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19689314 ttaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgtt 19689413  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19689414 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatg 19689513  T
Q  253 aaaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgt 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19689514 aaaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgt 19689600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 17396567 - 17396784
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17396567 taaggtaagggggttagtctttaccataatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgacatgaatgaatggataattgttg 17396666  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||||||||||||| ||||||||||||| |||| || |||||||    
T  17396667 ctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtgaaattacatgtttaaataagtaaaaatga 17396765  T
Q  254 aaagttatgaaaattgtgc 272  Q
     |||||||||| |||||||    
T  17396766 taagttatgaatattgtgc 17396784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 58 - 312
Target Start/End: Original strand, 25265307 - 25265563
Alignment:
Q  58 gtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgttgcta 156  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  25265307 gtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgttgcta 25265406  T
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaa 256  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||  ||    
T  25265407 aattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaa 25265506  T
Q  257 gttatgaaaattgtgcaaaatggatgaa-tttgacatgttgttgttgaattatgatg 312  Q
    ||| ||||||||||||  ||| | |||| ||||  ||||||||||||||||||||||    
T  25265507 gttgtgaaaattgtgctcaattggtgaattttgctatgttgttgttgaattatgatg 25265563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 6 - 272
Target Start/End: Original strand, 20627190 - 20627445
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttt 105  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||| | |  ||||||    
T  20627190 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaacggggttagtctttatcataatcatcatcattttgtaaaatttt 20627289  T
Q  106 tcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataat 205  Q
      |  ||| | ||||| |        |||| |  |||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||    
T  20627290 caaatatt-gtatgaatt--------atgatt--atggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcacgaattgatgat 20627378  T
Q  206 aattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||||||||||||||| |||||||||||   ||||||| ||||||| || || ||||||||||||    
T  20627379 aattgtatgattgttggtgaaattacatgtccaaatatgtaaaaatgataacttgtgaaaattgtgc 20627445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 54 - 271
Target Start/End: Original strand, 7507757 - 7507975
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| |||||||||| |||||| ||    
T  7507757 taaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaatgaatgaataattatt 7507856  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    |||||||||||||||    | ||||| ||| ||  | ||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||     
T  7507857 gctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaata 7507956  T
Q  253 aaaagttatgaaaattgtg 271  Q
    | |||||||||||||||||    
T  7507957 ataagttatgaaaattgtg 7507975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 139 - 306
Target Start/End: Original strand, 36982440 - 36982608
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||| |||| ||||||||||||      
T  36982440 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtattcatgaattgatgataattgtaagattgctggtgaaattacatgttca 36982539  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaa-tttgacatgttgttgttgaatt 306  Q
    ||||||| ||||||| ||||| ||||||||||||  ||| | |||| |||| || ||||||||||||||    
T  36982540 aatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgccaagttgttgttgaatt 36982608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 463001 - 462870
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  463001 atggataattgttgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 462902  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtg 271  Q
    |||||| ||||||| ||||| |||||||||||    
T  462901 atatgtaaaaatgataagttgtgaaaattgtg 462870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 43642833 - 43643053
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttt 105  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||  ||||| | || | |||     
T  43642833 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaagggaaggaggttagtctttatcataatcatcatcattttgtgaattttc 43642932  T
Q  106 tcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataat 205  Q
      |||  ||| ||||| |   ||    || || | |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||    
T  43642933 aaatg--ttgtatgaatt---tt----tgcat-agtggataattgttgctaaatttgtgctccaattgtgatgatatgtttgtatgcatgaattgatgat 43643022  T
Q  206 aattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||| ||||||||||||    
T  43643023 aattgtatgattgttggtgaaattacatgtt 43643053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 19794703 - 19794836
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||      
T  19794703 aatggataattgtcgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgataataattgtatgattgttggtgaaattacatgttca 19794802  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  19794803 aataggaacaaatgataagttgtgaaaattgtgc 19794836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 8891506 - 8891373
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||      
T  8891506 aatggataattgttgctaaattcgtgctccaactgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggcgaaattacatgttca 8891407  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  8891406 aataggaacaaatgataagttgtgaaaattgtgc 8891373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 24341390 - 24341521
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 240  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||  |     
T  24341390 tggataattgttgctaaattcatgcttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattatatgttcaat 24341489  T
Q  241 tatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||  ||||| ||||||||||||    
T  24341490 tatgtaaaaatgtgaagttgtgaaaattgtgc 24341521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 22275125 - 22275045
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22275125 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagcctttatcataatcat 22275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 22284358 - 22284278
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22284358 agaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 22284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 19794581 - 19794661
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  19794581 agaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcat 19794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 15633617 - 15633538
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  15633617 agaatcataggagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtctttatcataatca 15633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 19886661 - 19886781
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  ||| |    
T  19886661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 19886760  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  19886761 gataagttatgaagattgtgc 19886781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 43646289 - 43646232
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  43646289 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 43646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 463075 - 463043
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  463075 taaggtaagggggttagtctttatcataatcat 463043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9652796 - 9652828
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  9652796 taaggtaagggggttagtctttatcataatcat 9652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 19660273 - 19660221
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggg 65  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||||||||    
T  19660273 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggg 19660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 22863267 - 22863235
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  22863267 taaggtaagggggttagtctttatcataatcat 22863235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 36982364 - 36982396
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  36982364 taaggtaagggggttagtctttatcataatcat 36982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 11231256 - 11231311
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  11231256 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 11231311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 12728650 - 12728559
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  12728650 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 12728559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 22513103 - 22513158
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  22513103 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 22513158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 24685699 - 24685754
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  24685699 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 24685754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 86
Target Start/End: Complemental strand, 25213403 - 25213372
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 28775725 - 28775780
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  28775725 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 28775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 34824733 - 34824642
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  34824733 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 34824642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 19666921 - 19666848
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||| | | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  19666921 taggagctaaagtgaagtttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 19666848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 24341309 - 24341365
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcat--tctttgcaatttttca 108  Q
    ||||||||||||||||||||| |||||||||||  ||||  | ||||||||||||||    
T  24341309 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttca 24341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 24884933 - 24884852
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcat-gaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||| |||||| |||| |||||||||||||| |||||| |||||| | ||||||| ||  |||||||| ||||| ||||||    
T  24884933 aaatttgtgctctaactatgatgatatgtttgaatgcatggaattggtgataattgaattgttgttggtgaaattgcatgtt 24884852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 25305826 - 25305769
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||  | |||| |||||||||||||||||||||||    
T  25305826 taggagttaaagtgaagcttgggctatgaattggtgataattaaggtaagggggttag 25305769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 28031134 - 28031167
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatg 87  Q
    ||||||||||||||||||||| ||||||||||||    
T  28031134 taaggtaagggggttagtcttcatcataatcatg 28031167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 33128404 - 33128335
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  33128404 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 33128335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 68238 - 68158
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  68238 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 68158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 8891581 - 8891549
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| ||||||||||||||||||||||||    
T  8891581 taaggtaaaggggttagtctttatcataatcat 8891549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 8944185 - 8944129
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  8944185 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 8944129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 12641559 - 12641615
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  12641559 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 12641615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 12728731 - 12728675
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  12728731 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 12728675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 16935932 - 16935876
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  16935932 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 16935876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 17006592 - 17006536
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  17006592 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 17006536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 34824814 - 34824758
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  34824814 taaggtaagggggttagtgattatcataatcatgtacaatttttgcattttctcatg 34824758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 42177886 - 42177942
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  42177886 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 42177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 294; Significance: 1e-165; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 22889 - 22588
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22889 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatgaataattgttg 22790  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22789 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 22690  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22689 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 22590  T
Q  354 gt 355  Q
    ||    
T  22589 gt 22588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 27144 - 26843
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27144 taaggtaagggggttagtctttatcataatcatgttccttctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 27045  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27044 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 26945  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26944 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 26845  T
Q  354 gt 355  Q
    ||    
T  26844 gt 26843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 292; Significance: 1e-164; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 54 - 349
Target Start/End: Original strand, 16327840 - 16328135
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16327840 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 16327939  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16327940 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 16328039  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16328040 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattga 16328135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 10488911 - 10488610
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10488911 taaggtaaggtggttggtctttatcttaatcatgttcattctttgcaatttttcatgatttggatgaaatgagttgaaatgaatgaatggataattgttg 10488812  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488811 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 10488712  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10488711 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 10488612  T
Q  354 gt 355  Q
    ||    
T  10488611 gt 10488610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 54 - 306
Target Start/End: Complemental strand, 26680549 - 26680297
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  26680549 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttgtatggaatgggttgaaatgaatgaatggataattgttg 26680450  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  26680449 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtaaaaatga 26680350  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaatt 306  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  26680349 aaagttatgaaaattgtgcaaaatagatgaatttgacatgttgtagttgaatt 26680297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 54 - 287
Target Start/End: Original strand, 13048135 - 13048368
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13048135 taagttaagggggttagtctttatcaccatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 13048234  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||| |||||||||||  ||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||| ||||||| |||| ||    
T  13048235 ctaaattcatgctccaacttcaatgatatgtttgtatgcatgatttgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaagga 13048334  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaattt 287  Q
     |||||||||| |||||||  ||| |||||||||    
T  13048335 taagttatgaatattgtgctcaattgatgaattt 13048368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 122152 - 122020
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  122152 atggataattgttgctaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 122053  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  122052 atatgtaaaaatgataagttgtgaaaattgtgc 122020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 54118120 - 54118340
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttt 105  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||  | ||| | || | |||     
T  54118120 agaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgtgaattttc 54118219  T
Q  106 tcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataat 205  Q
      |||  ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||    
T  54118220 aaatg--ttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgat 54118309  T
Q  206 aattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||| ||||||||||||    
T  54118310 aattgtatgattgttggtgaaattacatgtt 54118340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 15675090 - 15675221
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  15675090 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 15675189  T
Q  241 tatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||  ||||| ||||||||||||    
T  15675190 tatgtaaaaatgtgaagttgtgaaaattgtgc 15675221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 10104251 - 10104382
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 240  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  10104251 tggataattgttgctaaatccgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 10104350  T
Q  241 tatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||  ||||| ||||||||||||    
T  10104351 tatgtaaaaatgtgaagttgtgaaaattgtgc 10104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 13246694 - 13246561
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||      
T  13246694 aatggataattgttgttaaattcgtgctacaactgtgatgatatgtttgtatgcatgaattaatgataattgtatgattgttggtgaaattacatgttca 13246595  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  13246594 aataggaacaaatgataagttgtgaaaattgtgc 13246561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 16609013 - 16609074
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16609013 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttg 16609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 31115865 - 31115764
Alignment:
Q  167 ccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaa 266  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||  ||||| ||||||    
T  31115865 ccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttccattatgtaaaaatgtgaagttgtgaaaa 31115766  T
Q  267 tt 268  Q
    ||    
T  31115765 tt 31115764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 25119059 - 25119139
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25119059 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggagttagtttttatcataatcat 25119139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 33240962 - 33240890
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtat 213  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  33240962 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgatgattgtat 33240890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 287
Target Start/End: Complemental strand, 10644467 - 10644336
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||  ||||||| ||||||  |    
T  10644467 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgtta 10644368  T
Q  256 agttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||||||||  ||||||| |||| | |||||||    
T  10644367 agttatgagtattgtgctaaattggtgaattt 10644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 47357906 - 47357771
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||| ||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  47357906 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatggattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 47357807  T
Q  252 gaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    || |||||||||| ||||||| |||| | |||||||    
T  47357806 gataagttatgaagattgtgctaaattggtgaattt 47357771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 5682380 - 5682460
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  5682380 agaatcataggagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagtgggttagtttttatcataatcat 5682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 26680142 - 26680080
Alignment:
Q  293 gttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgatgt 355  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||    
T  26680142 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgt 26680080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 40885570 - 40885650
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||| |||||||| || || ||||||||||||||||||||| | ||||||| ||| |||||||| ||||||||||||    
T  40885570 aaattcgtactccaactgtggtgctatgtttgtatgcatgaattggtgataattgaatgtttgttggtgaaattacatgtt 40885650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 9795565 - 9795453
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||  | |||||||||||||||| | ||| || ||| |||||  ||| ||||||||||||||   |||||||| |||||||||||    
T  9795565 taaggtaagggggttagttatcatcataatcatgttcaattttttcattttctcatg--ttgtatgaaatgggttgattggaatgaattgataattgttg 9795468  T
Q  154 ct-aaattcgtgctc 167  Q
     | ||||||||||||    
T  9795467 ttaaaattcgtgctc 9795453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 41165808 - 41165881
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||| |||||||||||||  || |||||||||||    
T  41165808 taggagctaaagtgaagcttgggctaggaattggtgataattaacgtaagggggttagaattcatcataatcat 41165881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 7850264 - 7850131
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||| ||||||| || ||||||||||||||||    |||| |||||||| ||| ||| |||||| | || ||| |||||||||||  ||||  ||||       
T  7850264 aatgcataattgctgttaaattcgtgctccaatggagatgttatgtttgaatgaatgtattgatgaaaactgtgtgattgttggtggaattgtatgtcca 7850165  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    | ||||||||||||  ||||||||||||||||||    
T  7850164 attatgtgaaaatgtgaagttatgaaaattgtgc 7850131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 19697278 - 19697391
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgt 151  Q
    |||||||||||||||||| ||  ||||||||||| |  || |  |||||||||| | ||  ||| ||||||||||||||   |||||||| |||||||||    
T  19697278 taaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattgt 19697375  T
Q  152 tgctaaattcgtgctc 167  Q
    || |||||||||||||    
T  19697376 tgttaaattcgtgctc 19697391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 19707863 - 19707976
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgt 151  Q
    |||||||||||||||||| ||  ||||||||||| |  || |  |||||||||| | ||  ||| ||||||||||||||   |||||||| |||||||||    
T  19707863 taaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattgt 19707960  T
Q  152 tgctaaattcgtgctc 167  Q
    || |||||||||||||    
T  19707961 tgttaaattcgtgctc 19707976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 47534933 - 47534990
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | || || | |||| |||||||||||||||||||||||    
T  47534933 taggagctaaagtgaagcttgggcgaggaattggtgataattaaggtaagggggttag 47534990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 13246769 - 13246737
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  13246769 taaggtaagggggttagtctttatcataatcat 13246737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 14952117 - 14952085
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  14952117 taaggtaagggggttagtctttatcataatcat 14952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15135907 - 15135939
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  15135907 taaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15272211 - 15272243
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  15272211 taaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 17145574 - 17145630
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  |||||||||||||||||| | |||||| ||| |||||    
T  17145574 taaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatg 17145630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 18169228 - 18169137
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  18169228 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 18169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 172
Target Start/End: Complemental strand, 31132576 - 31132545
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaact 172  Q
    ||||||||||||||||||||||||||||||||    
T  31132576 tggataattgttgctaaattcgtgctccaact 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 7850346 - 7850308
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcat 92  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  7850346 taaggtaagggggttagtcttcaccataatcatgttcat 7850308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 8045304 - 8045235
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  8045304 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 8045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 15675009 - 15675065
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcat--tctttgcaatttttca 108  Q
    ||||||||||||||||||||| |||||||||||  ||||  | ||||||||||||||    
T  15675009 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttca 15675065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 16523178 - 16523109
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  16523178 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 16523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 33241043 - 33240987
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcat--tctttgcaatttttca 108  Q
    ||||||||||||||||||||| |||||||||||  ||||  | ||||||||||||||    
T  33241043 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttca 33240987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 122226 - 122194
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||| ||||||||||||||||||||    
T  122226 taaggtaaggggattagtctttatcataatcat 122194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 7131982 - 7132038
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  7131982 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 7132038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 10104170 - 10104202
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  10104170 taaggtaagggggttagtcttcatcataatcat 10104202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 13809511 - 13809551
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  13809511 aattcgtgctccaattatgatgatatgtttgaatgcatgaa 13809551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 15045074 - 15044994
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  15045074 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 15044994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 15287162 - 15287218
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  15287162 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 15287218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 15294271 - 15294327
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  15294271 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 15294327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 20001062 - 20001006
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  20001062 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 20001006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 286; Significance: 1e-160; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 5238436 - 5238135
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238436 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 5238337  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5238336 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 5238237  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  5238236 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgat 5238137  T
Q  354 gt 355  Q
    ||    
T  5238136 gt 5238135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 24661162 - 24661463
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661162 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 24661261  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24661262 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 24661361  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  24661362 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgat 24661461  T
Q  354 gt 355  Q
    ||    
T  24661462 gt 24661463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 43685895 - 43685594
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685895 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 43685796  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43685795 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 43685696  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||    
T  43685695 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgat 43685596  T
Q  354 gt 355  Q
    ||    
T  43685595 gt 43685594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 54 - 306
Target Start/End: Original strand, 22907128 - 22907380
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22907128 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 22907227  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22907228 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 22907327  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaatt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22907328 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgtagttgaatt 22907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 56 - 272
Target Start/End: Complemental strand, 17345917 - 17345700
Alignment:
Q  56 aggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgttgc 154  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||||    
T  17345917 aggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgttgc 17345818  T
Q  155 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaa 254  Q
     |||||||||||| |||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||  | ||||| ||||||      
T  17345817 gaaattcgtgctctaactgtgatgttatgtttatatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaattatgtaaaaatgtg 17345718  T
Q  255 aagttatgaaaattgtgc 272  Q
    ||||||||||||||||||    
T  17345717 aagttatgaaaattgtgc 17345700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 16404852 - 16405071
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttt 105  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||   |||| |||| || |||    
T  16404852 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcat---cattatttgtaaattt 16404948  T
Q  106 tcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataat 205  Q
    |||    ||| ||||| |   ||    || |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  16404949 tcaaatgttgtatgaatt---tt----tgcatga-tggataattattgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgat 16405040  T
Q  206 aattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||| ||||||||||||    
T  16405041 aattgtatgattgttggtgaaattacatgtt 16405071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 16193716 - 16193848
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |    
T  16193716 atggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggggaaattacatgttcaa 16193815  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  16193816 atatgtaaaaatgataagttgtgaaaattgtgc 16193848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 43373467 - 43373600
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||||||      
T  43373467 aatggataattaatgctaaattcgtgctccaactgtgatgatacgtttgtatgcatgaattgatgataattatatgattgttggtgaaattacatgttca 43373566  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||||| ||||||| ||||| ||||||||||||    
T  43373567 aatatgtaaaaatgataagttgtgaaaattgtgc 43373600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 24928791 - 24928923
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  24928791 atggataattgttgctaaattcgtgctccaactgtgattatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 24928890  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||| |   |||||| ||||| ||||||||||||    
T  24928891 ataggaacaaatgataagttgtgaaaattgtgc 24928923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 6774258 - 6774378
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  6774258 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 6774357  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||||||||    
T  6774358 gataagttgtgaaaattgtgc 6774378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 21844576 - 21844692
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||| ||||||| |    
T  21844576 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 21844675  T
Q  256 agttatgaaaattgtgc 272  Q
    ||||||||| |||||||    
T  21844676 agttatgaatattgtgc 21844692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 24549233 - 24549113
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  24549233 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 24549134  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||| ||||    
T  24549133 gataagttgtgaaaatggtgc 24549113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 274846 - 274766
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  274846 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 641003 - 641083
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  641003 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 826809 - 826889
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  826809 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 826889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 21851969 - 21852085
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||||||||||| |||||| |||||| ||||||| ||||||| |    
T  21851969 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattaaatgtttaaatatgtaaaaatgata 21852068  T
Q  256 agttatgaaaattgtgc 272  Q
    ||||||||| |||||||    
T  21852069 agttatgaatattgtgc 21852085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 24716714 - 24716794
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  24716714 agaatcataggagcaaaagtgaagctagagctaatagttggtgataattaaggtaagggggttagtctttatcataatcat 24716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 30120974 - 30120854
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||| ||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  30120974 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 30120875  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  30120874 gataagttatgaatattgtgc 30120854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 16674392 - 16674512
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| ||||||| |||||||||||| ||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  16674392 tgctaaattcgtgctctttctgtgatgttatgtttttatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 16674491  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  16674492 gataagttatgaatattgtgc 16674512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 22907535 - 22907597
Alignment:
Q  293 gttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgatgt 355  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||    
T  22907535 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgt 22907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 39115678 - 39115598
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| |||||||  |||||||||||||||| |||||| || |||||||||||    
T  39115678 agaatcataggagcaaaagtgaagcttgagctaatagttggtaataattaaggtaagggtgttagttttcatcataatcat 39115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 2545297 - 2545183
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgt 151  Q
    ||||||||||||||||||||| ||||||||||||  |   || ||||||||||| | ||  ||| ||||||||||||||   |||||||| |||||||||    
T  2545297 taaggtaagggggttagtcttcatcataatcatgattgttttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattgt 2545200  T
Q  152 tgct-aaattcgtgctc 167  Q
    || | ||||||||||||    
T  2545199 tgttaaaattcgtgctc 2545183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17285600 - 17285543
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | | ||| | |||| |||||||||||||||||||||||    
T  17285600 taggagctaaagtgaagcttgggttaggaattggtgataattaaggtaagggggttag 17285543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21198005 - 21198062
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| ||||||||||||    
T  21198005 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggttag 21198062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 26011741 - 26011660
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||||||||||    
T  26011741 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattacatgtt 26011660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 24385652 - 24385684
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  24385652 taaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 43373392 - 43373424
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  43373392 taaggtaagggggttagtctttatcataatcat 43373424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 271278 - 271333
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  271278 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 644642 - 644587
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  644642 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 644587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 830377 - 830322
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  830377 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 15319077 - 15319132
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  15319077 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 15319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 15499446 - 15499501
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  15499446 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 15499501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 16195489 - 16195398
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    |||||||||||||||||| |||   || ||||| ||||||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  16195489 aattgttgctaaattcgttctcgtgctgtgatgctatgttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 16195398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 22006256 - 22006347
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  22006256 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 22006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 23226076 - 23226131
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 210  Q
    ||||| |||||| |||| |||||||||||||||||||||| ||||||| |||||||    
T  23226076 aaatttgtgctctaactatgatgatatgtttgtatgcatgaaattgatgataattg 23226131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 18612693 - 18612643
Alignment:
Q  117 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 167  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  18612693 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 18612643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 22147725 - 22147675
Alignment:
Q  117 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 167  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  22147725 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 22147675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 3431176 - 3431245
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  3431176 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 3431245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 23150026 - 23149985
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    ||||||||||||||| | |||||||||||||| |||||||||    
T  23150026 aaattcgtgctccaattatgatgatatgtttgaatgcatgaa 23149985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 222754 - 222826
Alignment:
Q  215 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||||||||| ||||||||||||   |||||  ||||||| |||||||||| ||||||| |||| | |||||||    
T  222754 attgttggtgaaattacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaattt 222826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 736377 - 736449
Alignment:
Q  215 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||||||||| ||||||||||||   |||||  ||||||| |||||||||| ||||||| |||| | |||||||    
T  736377 attgttggtgaaattacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaattt 736449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 860272 - 860344
Alignment:
Q  215 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||||||||| ||||||||||||   |||||  ||||||| |||||||||| ||||||| |||| | |||||||    
T  860272 attgttggtgaaattacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaattt 860344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 13662182 - 13662238
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  13662182 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 13662238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 13720845 - 13720901
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  13720845 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 13720901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 16872968 - 16873024
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  16872968 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 16873024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 17285450 - 17285370
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||| | |||||||||||||  ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  17285450 aattcgtgctccaattatgatgatatgtttaaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 17285370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 22886686 - 22886654
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  22886686 taaggtaagggggttagtcttaatcataatcat 22886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 24928716 - 24928748
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| ||||||||||||||||||||||||    
T  24928716 taaggtaatggggttagtctttatcataatcat 24928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 15441478 - 15441779
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441478 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 15441577  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15441578 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 15441677  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  15441678 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgat 15441777  T
Q  354 gt 355  Q
    ||    
T  15441778 gt 15441779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 30262043 - 30262344
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30262043 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 30262142  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30262143 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 30262242  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  30262243 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgat 30262342  T
Q  354 gt 355  Q
    ||    
T  30262343 gt 30262344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 11516576 - 11516275
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516576 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 11516477  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11516476 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 11516377  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  ||||||| ||||    
T  11516376 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgagtatatgttatgattgtggttgattgttgat 11516277  T
Q  354 gt 355  Q
    ||    
T  11516276 gt 11516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 54 - 306
Target Start/End: Complemental strand, 7293365 - 7293113
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7293365 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 7293266  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7293265 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattaataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 7293166  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaatt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293165 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaatt 7293113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 25292252 - 25292470
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  25292252 taagataagggggttagtctttatcataatcaagttcattctttgcaatttttcaagatttgtatgaaatgggttgaaatgaatgaatggataattgttg 25292351  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||| ||||||||||||| ||||||| |||| ||    
T  25292352 ctaaatttgtgctccaactttgatgatatgtttgtatgtatgaattgttgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaagga 25292451  T
Q  254 aaagttatgaaaattgtgc 272  Q
     ||| |||||| |||||||    
T  25292452 taagctatgaatattgtgc 25292470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 14113903 - 14114031
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14113903 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 14114002  T
Q  154 ctaaattcgtgctccaactttgatgatat 182  Q
    |||||||||||||||||||||||||||||    
T  14114003 ctaaattcgtgctccaactttgatgatat 14114031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 54 - 271
Target Start/End: Original strand, 47480944 - 47481162
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||| ||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||    
T  47480944 taaggtaagggggttagtcttcatcataatcatattcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgtt 47481043  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||  ||||||| ||||||    
T  47481044 gctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatg 47481143  T
Q  253 aaaagttatgaaaattgtg 271  Q
    | ||||| |||||||||||    
T  47481144 ataagttgtgaaaattgtg 47481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 14423554 - 14423681
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14423554 taaggtaagggggttagtctt-atcataatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 14423652  T
Q  154 ctaaattcgtgctccaactttgatgatat 182  Q
    |||||||||||||||||||||||||||||    
T  14423653 ctaaattcgtgctccaactttgatgatat 14423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 54 - 237
Target Start/End: Complemental strand, 13321366 - 13321182
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| | ||||||||||||    
T  13321366 taaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataagtggataattgtt 13321267  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  13321266 gctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttt 13321182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 16212029 - 16211897
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||||  |    
T  16212029 atggacaattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgtttgtgaaattgcatgttcaa 16211930  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  16211929 atatgtaaaaatgataagttgtgaaaattgtgc 16211897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 18253841 - 18253967
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||    
T  18253841 aattgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgt 18253940  T
Q  246 gaaaatgaaaagttatgaaaattgtgc 272  Q
     ||||||| ||||| ||||||||||||    
T  18253941 aaaaatgataagttgtgaaaattgtgc 18253967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 11580738 - 11580871
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  11580738 aatggataattattgctaaattcgtgctccaactgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 11580837  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  11580838 aataggaacaaatgataagttgtgaaaattgtgc 11580871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 13037013 - 13037146
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||      
T  13037013 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttgatgaaattgcatgttca 13037112  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  13037113 aataggaacaaatgataagttgtgaaaattgtgc 13037146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 36052928 - 36052795
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||||||||||||  | |||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||||||      
T  36052928 aatggataattgttgctaaatttatactccaactgtgatgatacgtttgtatgcatgaattgatgataattatatgattgttggtaaaattacatgttca 36052829  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||||| ||||||| ||||| ||||||||||||    
T  36052828 aatatgtaaaaatgataagttgtgaaaattgtgc 36052795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 3060229 - 3060101
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||| |||||||||  | ||||||| ||||||||||||  |    
T  3060229 atggataattgttgctaaattcgtgctccaactgtgataatatatttgtatgcattaattgatgataattgtaatactgttggtgaaattacatgttcaa 3060130  T
Q  240 atatgtgaaaatgaaaagttatgaaaatt 268  Q
    |||||| ||||||| || || ||||||||    
T  3060129 atatgtaaaaatgataaattgtgaaaatt 3060101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 16478968 - 16479082
Alignment:
Q  158 attcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaag 257  Q
    ||||||||||  |||  |||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||    
T  16478968 attcgtgctcttactgcgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataag 16479067  T
Q  258 ttatgaaaattgtgc 272  Q
    || ||||||||||||    
T  16479068 ttgtgaaaattgtgc 16479082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 13572924 - 13572808
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||| ||||||| ||||||| |    
T  13572924 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtgtgattgttggtgaaattacatgtttaaatatgtaaaaatgata 13572825  T
Q  256 agttatgaaaattgtgc 272  Q
    ||||||||| |||||||    
T  13572824 agttatgaatattgtgc 13572808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 32493898 - 32493978
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32493898 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 32493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 3060344 - 3060271
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  3060344 taggagcaaaagtgaagctagagctaatagttggagataatgaaggtaagggggtaagtctttatcataatcat 3060271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 126818 - 126738
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  126818 agaatcataggagcaaaaatgaagttagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 10989661 - 10989541
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  10989661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 10989562  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  10989561 gataagttatgaatattgtgc 10989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 2437715 - 2437590
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    |||| |||||||||||||||||    | ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||     
T  2437715 aattcttgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgc 2437616  T
Q  246 gaaaatgaaaagttatgaaaattgtg 271  Q
     ||||||| |||||||||| ||||||    
T  2437615 aaaaatgataagttatgaagattgtg 2437590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 1936869 - 1936949
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||| ||| ||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1936869 agaatcatagaagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtttttatcataatcat 1936949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 13911024 - 13911136
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||    | ||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||   |||||  |||||    
T  13911024 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttaattgtatgattgttggtgaaattacatgttcatatatgcaaaaat 13911123  T
Q  252 gaaaagttatgaa 264  Q
    || ||||||||||    
T  13911124 gataagttatgaa 13911136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 111121 - 111201
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| || |||||||||||    
T  111121 agaatcataggagcaaaagtgaagcttgagctaaaagttggtgataattaaggtaagggggttagttttcatcataatcat 111201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 295965 - 296094
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||| ||||||||||||||||||||| || || |  | || ||||||||| ||||||||| ||| |||||  ||||||||||||| ||||| ||||||      
T  295965 aatgaataattgttgctaaattcgtgttctaattgaggtgttatgtttgtgtgcatgaatcgatgataatgttatgattgttggtgaaatttcatgttga 296064  T
Q  239 aatatgtgaaaatgaaaagttatgaaaatt 268  Q
    | ||||| ||||||| ||||||| ||||||    
T  296065 attatgtaaaaatgagaagttataaaaatt 296094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 7283908 - 7283987
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||||||||||| ||| || || |||| |||||||||||||||||||||||| || ||||||||||    
T  7283908 agaatcataggagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttagttttcatcataatca 7283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 7292958 - 7292896
Alignment:
Q  293 gttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgatgt 355  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||||    
T  7292958 gttgttgttgaattatgatggagtgtatgattatatgttgtgattgtggttgattgttgatgt 7292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 13377924 - 13377851
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||  || |||||||||||    
T  13377924 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcatcataatcat 13377851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 13389750 - 13389693
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  13389750 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 48622664 - 48622754
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||| ||||||||||||||||  ||| ||||||||| ||  | ||||||||||||| || || ||||| |||| ||| ||||||||||||    
T  48622664 aattgatgctaaattcgtgctcttactgtgatgatattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgtt 48622754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 16914928 - 16915009
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||||| ||||||| ||  |||||||| ||||| ||||||    
T  16914928 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgtt 16915009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2029276 - 2029244
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  2029276 taaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16212103 - 16212071
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16212103 taaggtaagggggttagtctttatcataatcat 16212071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 16919926 - 16919870
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtta 69  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| |||||||||||    
T  16919926 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggtta 16919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 36053003 - 36052971
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  36053003 taaggtaagggggttagtctttatcataatcat 36052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 42056188 - 42056220
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  42056188 taaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 7823066 - 7823011
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  7823066 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 7823011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 7830377 - 7830322
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  7830377 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 7830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 15950789 - 15950880
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  15950789 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 15950880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 18980019 - 18980110
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  18980019 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 18980110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 27101555 - 27101610
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  27101555 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 27101610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 27108903 - 27108958
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  27108903 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 27108958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 27176771 - 27176716
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  27176771 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 27176716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 38783647 - 38783702
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  38783647 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 38783702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 371449 - 371380
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  371449 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 9611555 - 9611474
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  9611555 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 9611474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 9839126 - 9839045
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  9839126 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 9839045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 3049937 - 3049905
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||| ||||||||||||||    
T  3049937 taaggtaagggggttagtttttatcataatcat 3049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 11580661 - 11580693
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||| ||||||||||||||||||||    
T  11580661 taaggtaaggggattagtctttatcataatcat 11580693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 13377775 - 13377695
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  13377775 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 13377695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 13758709 - 13758653
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  13758709 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 13758653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 14250815 - 14250871
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  | ||| |||||||||||||| |||||| ||| |||||    
T  14250815 taaggtaagggggttagttatcatcgtaatcatgttcattttttgcattttctcatg 14250871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 15516765 - 15516793
Alignment:
Q  58 gtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||    
T  15516765 gtaagggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 15760031 - 15760087
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||    
T  15760031 taaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg 15760087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 15927907 - 15927851
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  15927907 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 15927851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 18979938 - 18979994
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  18979938 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 18979994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 25124482 - 25124450
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  25124482 taaggtaagggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 16536546 - 16536245
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536546 taagataagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 16536447  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536446 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaatttataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 16536347  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  16536346 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattgtatgttatgattgtagttgattgatgat 16536247  T
Q  354 gt 355  Q
    ||    
T  16536246 gt 16536245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 20623318 - 20623017
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623318 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 20623219  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20623218 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 20623119  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  20623118 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgat 20623019  T
Q  354 gt 355  Q
    ||    
T  20623018 gt 20623017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 21233442 - 21233743
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233442 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 21233541  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21233542 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 21233641  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  21233642 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgat 21233741  T
Q  354 gt 355  Q
    ||    
T  21233742 gt 21233743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 37053093 - 37052792
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37053093 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgagatgggttgaaatgaatgaatggataattgttg 37052994  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052993 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtggaaatga 37052894  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  37052893 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgagttatgatggagggtatgattatatgttatgattgtggttgattgatgat 37052794  T
Q  354 gt 355  Q
    ||    
T  37052793 gt 37052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 25900320 - 25900620
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25900320 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaacggataattgttg 25900419  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25900420 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggttaaattatatgtttgaatatgtgaaaatga 25900519  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25900520 aaagttatgaaaattgtgcaaaatggatgaa-ttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgat 25900618  T
Q  354 gt 355  Q
    ||    
T  25900619 gt 25900620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 272
Target Start/End: Complemental strand, 34939627 - 34939408
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    |||||||||||||||||| ||  |||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||| ||||    
T  34939627 taaggtaagggggttagtgttcttcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataactgtt 34939528  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||  | ||||| ||||||    
T  34939527 gctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaattatgtaaaaatg 34939428  T
Q  253 aaaagttatgaaaattgtgc 272  Q
      ||||||||||||||||||    
T  34939427 tgaagttatgaaaattgtgc 34939408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 23507228 - 23507096
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  23507228 atggataattgttgctaaattcgtgctccatttgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 23507129  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  23507128 atatgtaaaaatgataagttgtgaaaattgtgc 23507096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 18531068 - 18531198
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  18531068 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 18531167  T
Q  241 tatgtgaaaatgaaaagttatgaaaattgtg 271  Q
    ||||| ||||||  ||||| |||||||||||    
T  18531168 tatgtaaaaatgtgaagttgtgaaaattgtg 18531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 22053834 - 22053965
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||  |     
T  22053834 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgtatgaattgatgatagttgtatgattgttggtgaaattacatgttcaat 22053933  T
Q  241 tatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||  ||||| ||||||||||||    
T  22053934 tatgtaaaaatgtgaagttgtgaaaattgtgc 22053965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 27182546 - 27182679
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||      
T  27182546 aatggataattgttgctaaattcatgctccaactgtgatgatatgtttgtatgcatgaactgatgataattgtatgattgttgatgaaattacatgttca 27182645  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  27182646 aataggaacaaatgataagttgtgaaaattgtgc 27182679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 29188284 - 29188404
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  29188284 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 29188383  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||| ||||    
T  29188384 gataagttgtgaaaatggtgc 29188404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 237
Target Start/End: Complemental strand, 32951045 - 32950861
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgtt 152  Q
    |||||||||||||||||||||| ||||||| |||||||| |  |||||| || || |   ||| ||||||||||||||   |||||||| ||||||||||    
T  32951045 ttaaggtaagggggttagtcttcatcataaccatgttcaattattgcaacttctcctttgttgtatgaaatgggttgattggaatgaattgataattgtt 32950946  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    | ||||||||||||| |||| ||||| ||| || || || |||| ||||| |||||||||||||||| | | |||||||||||||    
T  32950945 gttaaattcgtgctctaactgtgatgttattttcgtgtgtatgatttgatgataattgtatgattgtggttgaaattacatgttt 32950861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 27010089 - 27009975
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| ||||||| ||||||| |    
T  27010089 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgagtgttggtgaaattacatgtttaaatatgtaaaaatgata 27009990  T
Q  256 agttatgaaaattgt 270  Q
    ||||||||| |||||    
T  27009989 agttatgaatattgt 27009975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 22366481 - 22366616
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  22366481 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 22366580  T
Q  252 gaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    || |||||||||| ||||||| |||| | |||||||    
T  22366581 gataagttatgaagattgtgctaaattggtgaattt 22366616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 43443398 - 43443515
Alignment:
Q  155 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaa 254  Q
    |||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||||     
T  43443398 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaatgat 43443497  T
Q  255 aagttatgaaaattgtgc 272  Q
    |||||||||| |||||||    
T  43443498 aagttatgaatattgtgc 43443515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 287
Target Start/End: Original strand, 18777995 - 18778127
Alignment:
Q  155 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaa 254  Q
    |||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||||     
T  18777995 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaatgat 18778094  T
Q  255 aagttatgaaaattgtgcaaaatggatgaattt 287  Q
    |||||||||| ||||||| |||| | |||||||    
T  18778095 aagttatgaagattgtgctaaattggtgaattt 18778127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 19500151 - 19500031
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  19500151 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 19500052  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  19500051 gataagttatgaagattgtgc 19500031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 25426880 - 25426760
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  25426880 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25426781  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  25426780 gataagttatgaagattgtgc 25426760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 4199985 - 4200120
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||    | ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  4199985 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 4200084  T
Q  252 gaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    || |||||||||| ||| ||| |||| | |||||||    
T  4200085 gataagttatgaatattatgctaaattggtgaattt 4200120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 12626 - 12506
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  ||| |    
T  12626 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 12527  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  12526 gataagttatgaagattgtgc 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 21073595 - 21073715
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| ||||||||||||||||||| |||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  21073595 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatggatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 21073694  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  21073695 gataagttatgaagattgtgc 21073715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 11584448 - 11584374
Alignment:
Q  11 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||  || ||||||||||    
T  11584448 cataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagaattcatcataatca 11584374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 36989688 - 36989743
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||||||| |||||    
T  36989688 aaggtaagggggttagttattatcataatcatgtacaatctttgcaatttctcatg 36989743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 5450695 - 5450768
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||   ||||||||||||||||||||||  || |||||||||||    
T  5450695 taggagctaaagtgaagcttgggctaggaattgataataattaaggtaagggggttagaattcatcataatcat 5450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21222462 - 21222519
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||| |||||||||    
T  21222462 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtatgggggttag 21222519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 21310709 - 21310790
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| |||| |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  21310709 aaattcgtgctctaactatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 21310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 29918212 - 29918131
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||||||||||||| | |||||||||||||| || |||| ||||||| ||||||| ||  |||||||| ||||| ||||||    
T  29918212 aaattcgtgctccaattatgatgatatgtttgaatacatgaaattgatgataattgaattgttgttggtgaaattgcatgtt 29918131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16105999 - 16105967
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16105999 taaggtaagggggttagtctttatcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23507302 - 23507270
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  23507302 taaggtaagggggttagtctttatcataatcat 23507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 10777968 - 10778059
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  10777968 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 10778059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 11211983 - 11212038
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  |||||||||||||||||| | |||||| ||| |||||    
T  11211983 aaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatg 11212038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 21932299 - 21932354
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  21932299 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 21932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 21938469 - 21938524
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  21938469 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 21938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 23514819 - 23514728
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  23514819 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 23514728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 35582374 - 35582319
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  35582374 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 35582319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 17909792 - 17909742
Alignment:
Q  117 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 167  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  17909792 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 17909742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 108728 - 108797
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  108728 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 108797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 9730278 - 9730347
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  9730278 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 9730347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 19862456 - 19862375
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  19862456 aaattcgtgctctaattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 19862375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 23981516 - 23981557
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  23981516 aaattcgtgctctaattatgatgatatgtttgtatgcatgaa 23981557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 1219437 - 1219493
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  1219437 taaggtaagggggttagtgattatcataatcatgtacaatttttgcattttctcatg 1219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 7425663 - 7425607
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  7425663 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 7425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 22053753 - 22053785
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  22053753 taaggtaagggggttagtcttcatcataatcat 22053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 23514900 - 23514844
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||    
T  23514900 taaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg 23514844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 27182471 - 27182503
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  27182471 taaggtaagggggttagtcttcatcataatcat 27182503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 35791015 - 35791071
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  35791015 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 35791071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 278; Significance: 1e-155; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 51452841 - 51452540
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  51452841 taaggtaagggggttagtctttatcttaatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 51452742  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51452741 ctaaattcgtgcttcaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatga 51452642  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagggtatgattatatgttatgattgtacttgattgatgat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  51452641 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtagttgattgatgat 51452542  T
Q  354 gt 355  Q
    ||    
T  51452541 gt 51452540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 4 - 272
Target Start/End: Complemental strand, 41394609 - 41394353
Alignment:
Q  4 ggagaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatgttcattctttgcaatt 103  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||| || |    
T  41394609 ggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaat 41394512  T
Q  104 tttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgata 203  Q
    |||||    ||| ||||| |         ||| |  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||     
T  41394511 tttcaaatgttgtatgaattt--------tgatt--atggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcataaattgatg 41394422  T
Q  204 ataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||||||||||||||||| || |||||||||  ||||||| ||||||| ||||| ||||||||||||    
T  41394421 ataattgtatgattgttggtgaagttacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgc 41394353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 20931608 - 20931461
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||       
T  20931608 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcat 20931509  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    |||||| ||||||| |||||||||||||||||| |||| | |||||||    
T  20931508 atatgtaaaaatgataagttatgaaaattgtgctaaattggtgaattt 20931461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 20913291 - 20913161
Alignment:
Q  142 ggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaat 241  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||   ||    
T  20913291 ggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcatat 20913192  T
Q  242 atgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| ||||||| ||||||||||||||||||    
T  20913191 atgtaaaaatgataagttatgaaaattgtgc 20913161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 20445943 - 20445846
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20445943 aatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 20445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 20893625 - 20893758
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||      
T  20893625 aatggataattgttgctaaattcttgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttgttgaaattacatgttca 20893724  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  20893725 aataggaacaaatgataagttgtgaaaattgtgc 20893758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 37844449 - 37844546
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  37844449 aatggataattgttgctaaattcatgctccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 37844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 20531708 - 20531611
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20531708 aatggataattgttgctaaattcgtgctccaaatgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 20531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 2116506 - 2116386
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| |||||||||   ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  2116506 tgctagattcgtgcttttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 2116407  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||| ||||    
T  2116406 gataagttgtgaaaatggtgc 2116386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 21860414 - 21860334
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  21860414 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 21860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 45051674 - 45051554
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| ||||||| ||  ||| ||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  45051674 tgctagattcgtgttcttactgtgatgttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 45051575  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||||||||    
T  45051574 gataagttgtgaaaattgtgc 45051554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 44034829 - 44034903
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44034829 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 44034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 22228066 - 22227941
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    |||| |||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||||||||||||||||| || ||||||||||||  |||||||    
T  22228066 aattcttgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgt 22227967  T
Q  246 gaaaatgaaaagttatgaaaattgtg 271  Q
     ||||||| |||||||||||||||||    
T  22227966 aaaaatgataagttatgaaaattgtg 22227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 22232763 - 22232638
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    |||| |||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||||||||||||||||| || ||||||||||||  |||||||    
T  22232763 aattcttgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgt 22232664  T
Q  246 gaaaatgaaaagttatgaaaattgtg 271  Q
     ||||||| |||||||||||||||||    
T  22232663 aaaaatgataagttatgaaaattgtg 22232638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 5072388 - 5072508
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| ||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  5072388 tgctaaattcgtgctcttgctgtgatgttatgtttatatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 5072487  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  5072488 gataagttatgaatattgtgc 5072508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 18601118 - 18601238
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    |||||||||| |||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  18601118 tgctaaattcatgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 18601217  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  18601218 gataagttatgaatattgtgc 18601238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41218808 - 41218728
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || ||||| |||||    
T  41218808 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcatgatcat 41218728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 27675191 - 27675120
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatc 84  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||  ||||||||||||    
T  27675191 taggagctaaagtgaagcttgggctaggaattggagataattaaggtaagggggttagaatttatcataatc 27675120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 45051759 - 45051724
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatgt 88  Q
    ||||||||||||||||||||||||||||||||||||    
T  45051759 ttaaggtaagggggttagtctttatcataatcatgt 45051724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 13376711 - 13376768
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  13376711 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 13376768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 20177570 - 20177513
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||| ||||||||    
T  20177570 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaatggggttag 20177513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 37844374 - 37844406
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  37844374 taaggtaagggggttagtctttatcataatcat 37844406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 15861327 - 15861358
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  15861327 aaggtaagggggttagtctttatcataatcat 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 17004976 - 17004921
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  17004976 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 17004921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 19962417 - 19962472
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  19962417 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 19962472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 22143361 - 22143402
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  22143361 aaattcgtgctctaactatgatgatgtgtttgtatgcatgaa 22143402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 38055009 - 38055054
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgca 100  Q
    |||||||||||||||||  ||||||||||||||| || ||||||||    
T  38055009 aaggtaagggggttagttattatcataatcatgtacaatctttgca 38055054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 20446019 - 20445987
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||||||    
T  20446019 taaggtaagggagttagtctttatcataatcat 20445987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 20893551 - 20893583
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  20893551 taaggtaagggggttagtcttcatcataatcat 20893583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 20913367 - 20913335
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||| |||||||    
T  20913367 taaggtaagggggttagtctttatcgtaatcat 20913335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 20931682 - 20931650
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||| |||||||||||||||    
T  20931682 taaggtaagggggttagcctttatcataatcat 20931650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 46523727 - 46523691
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttc 90  Q
    ||||||||||||||||||  |||||||||||||||||    
T  46523727 taaggtaagggggttagttattatcataatcatgttc 46523691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 233; Significance: 1e-129; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 54 - 302
Target Start/End: Original strand, 36980 - 37228
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36980 taaggtaagggggttagtctttatcataatcatgttcattccttacaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttg 37079  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37080 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 37179  T
Q  254 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgttgttg 302  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37180 aaagttatgaaaattgtgcaaaatggatgaatttgacatgttgtagttg 37228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41712 - 41632
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  41712 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 41632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 37391 - 37442
Alignment:
Q  297 ttgttgaattatgatggagggtatgattatatgttatgattgtacttgattg 348  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  37391 ttgttgaattatgatggagtgtatgattatatgttgtgattgtggttgattg 37442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 54 - 272
Target Start/End: Complemental strand, 5878 - 5660
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  5878 taaggtaagggggttagtctttaccataatcatgttcattctttacaatttttcatgatttgtatgaaatggattgaaacgaatgaatgaataattgttg 5779  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatga 253  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  5778 ctaaattcgtgctccaactttgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatga 5679  T
Q  254 aaagttatgaaaattgtgc 272  Q
     |||| ||||| |||||||    
T  5678 taagtcatgaatattgtgc 5660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 54 - 312
Target Start/End: Complemental strand, 13856 - 13596
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| |||||||||||||| |||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||    
T  13856 taaggtaagggggttagtcttcatcataatcatgtttatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgtt 13757  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||    
T  13756 gctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 13657  T
Q  253 aaaagttatgaaaattgtgcaaaatggatgaa-tttgacatgttgttgttgaattatgatg 312  Q
      ||||| ||||||||||||  ||| |||||| ||||  ||||||||||||||||||||||    
T  13656 tgaagttgtgaaaattgtgctcaattgatgaattttgctatgttgttgttgaattatgatg 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 42754 - 42677
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||||||||    
T  42754 agaatcataggagcaaaagtgaagctagagctaatagttggagata---aaggtaagggggttagtttttatcataatcat 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 6e-62; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 58 - 312
Target Start/End: Original strand, 35009356 - 35009612
Alignment:
Q  58 gtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgttgcta 156  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||  ||||||||||||||||||    
T  35009356 gtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaagaaatggataattgttgcta 35009455  T
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaa 256  Q
    ||||||||||| |||| ||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||  ||    
T  35009456 aattcgtgctctaactgtgatgttaagtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaa 35009555  T
Q  257 gttatgaaaattgtgcaaaatggatgaa-tttgacatgttgttgttgaattatgatg 312  Q
    ||| ||||||||||||  ||| | |||| ||||  ||||||||||||||||||||||    
T  35009556 gttttgaaaattgtgctcaattggtgaattttgctatgttgttgttgaattatgatg 35009612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 1657661 - 1657880
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||    
T  1657661 taaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgtt 1657760  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    ||||||||||||||| |||| ||||| |||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||  | ||||| ||||||    
T  1657761 gctaaattcgtgctctaactgtgatgttatgtttggatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaattatgtaaaaatg 1657860  T
Q  253 aaaagttatgaaaattgtgc 272  Q
      ||||||||||||||||||    
T  1657861 tgaagttatgaaaattgtgc 1657880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 54 - 272
Target Start/End: Complemental strand, 15862821 - 15862602
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||    
T  15862821 taaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgtt 15862722  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
     |||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||  | |||||  |||||    
T  15862721 actaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaattatgtataaatg 15862622  T
Q  253 aaaagttatgaaaattgtgc 272  Q
      ||||||||||||||||||    
T  15862621 tgaagttatgaaaattgtgc 15862602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 27751774 - 27751605
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||  | || ||||| |||||||||| ||||| ||||||||| |||     
T  27751774 taaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatt-tgtgtatgaatatgggttgaattgaataaatggataaatgta 27751676  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggt 223  Q
    ||||||||||||||| || | ||||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  27751675 gctaaattcgtgctctaattgtgatgttatgtttgtatgcatgaattgatgacaattgtatgattgttggt 27751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 23153711 - 23153578
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  23153711 aatggataattgtttctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 23153612  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  23153611 aataggaacaaatgataagttgtgaaaattgtgc 23153578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 14626118 - 14626249
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||||||| |||||||||||||||||   || ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  14626118 atggataattattgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 14626217  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtg 271  Q
    |||||| ||||||| |||||||||||||||||    
T  14626218 atatgtaaaaatgataagttatgaaaattgtg 14626249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 1650105 - 1650225
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| ||||||||||  ||| ||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| | |||    
T  1650105 tgctagattcgtgctcttactgtgatgttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaagaat 1650204  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||||||||    
T  1650205 gataagttgtgaaaattgtgc 1650225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 19983144 - 19983224
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  19983144 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 19983224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 35015009 - 35015089
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35015009 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 35015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 25175815 - 25175680
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || || || |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  25175815 tgctaaattcgtgctcttgctgtgttgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25175716  T
Q  252 gaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    || |||||||||| ||||||| |||| | |||||||    
T  25175715 gataagttatgaagattgtgctaaattggtgaattt 25175680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 27653983 - 27654118
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||| ||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  27653983 tgctaaattcgtgctcttgctgtgatgttatgcttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 27654082  T
Q  252 gaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    || |||||||||| ||||||| |||| | |||||||    
T  27654083 gataagttatgaagattgtgctaaattggtgaattt 27654118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 29666137 - 29666040
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    |||||||||||||| ||||||||||||| | || ||||| ||| ||  |||| |||||||||| |||||||||||||||| ||| |||||||||||||    
T  29666137 atggataattgttgttaaattcgtgctctagctgtgatgttattttcttatgtatgaattgatgataattgtatgattgtgggtgaaattacatgttt 29666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 18583720 - 18583640
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || |||||||||||    
T  18583720 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagttttcatcataatcat 18583640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 16825752 - 16825879
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgta--tgattgttggttaaattacatgtttgaatatgtgaaa 249  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||  | ||||||||| ||||||||||||   |||||  |||    
T  16825752 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtaattaattgttggtgaaattacatgttcatatatgcaaaa 16825851  T
Q  250 atgaaaagttatgaaaattgtgcaaaat 277  Q
    |||| |||||||||| ||||||| ||||    
T  16825852 atgataagttatgaagattgtgctaaat 16825879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 21623563 - 21623506
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  21623563 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 21623506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 1650020 - 1650055
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatgt 88  Q
    ||||||||||||||||||||||||||||||||||||    
T  1650020 ttaaggtaagggggttagtctttatcataatcatgt 1650055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 18629608 - 18629689
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||||| ||||||| ||  |||||||| ||||| ||||||    
T  18629608 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgtt 18629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 22361619 - 22361676
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| |  |||| | |||| |||||||||||||||||||||||    
T  22361619 taggagctaaagtgaagcttggcctaggaattggtgataattaaggtaagggggttag 22361676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14152704 - 14152632
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||||||||||| | ||||| | || | | ||||||||| |||||||||| |||| ||||||||||    
T  14152704 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggcaagggggttattcttcatcataatca 14152632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 16299886 - 16299999
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatg-ttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgtt 152  Q
    |||||||||||||||||||||  || |||||||| ||  || ||||||||||| | ||  ||| ||||||||||||||   |||||||| ||||||||||    
T  16299886 taaggtaagggggttagtcttcttcttaatcatgattgtttgtttgcaattttccttg--ttgtatgaaatgggttgattagaatgaattgataattgtt 16299983  T
Q  153 gct-aaattcgtgctc 167  Q
    | | ||||||||||||    
T  16299984 gttaaaattcgtgctc 16299999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 18002395 - 18002427
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  18002395 taaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23995279 - 23995247
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  23995279 taaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 26090091 - 26090059
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  26090091 taaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 29605696 - 29605616
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | || ||||||||||| |||||||||||  | ||||||| ||  |||||||| ||||||||||||    
T  29605696 aaattcgtgctctaattatggtgatatgtttgaatgcatgaattagtgataattgaattgttgttggtgaaattacatgtt 29605616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 1556263 - 1556172
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  1556263 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 1556172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 86
Target Start/End: Complemental strand, 4991427 - 4991396
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 10489037 - 10488982
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  10489037 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 10488982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 16232150 - 16232059
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  16232150 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 16232059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16376291 - 16376346
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16376291 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16376346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16383615 - 16383670
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16383615 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16383670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16556057 - 16556112
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16556057 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16556112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16632613 - 16632668
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16632613 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16632668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 16887792 - 16887847
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 210  Q
    |||||||||||| |||| |||| ||||||||||||||||| ||||||| |||||||    
T  16887792 aaattcgtgctctaactatgataatatgtttgtatgcatgaaattgatgataattg 16887847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 17083200 - 17083271
Alignment:
Q  158 attcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaatt 229  Q
    |||||||||| || | |||||||||||||| |||||||||||| | ||||||| ||  |||||||| |||||    
T  17083200 attcgtgctctaattatgatgatatgtttgaatgcatgaattggtgataattgaattgttgttggtgaaatt 17083271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 19299575 - 19299520
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  19299575 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 19299520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 35136013 - 35136068
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 210  Q
    |||||||||||| ||||  ||||||||||||||||||||| ||||||| |||||||    
T  35136013 aaattcgtgctctaactaggatgatatgtttgtatgcatgaaattgatgataattg 35136068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 15742120 - 15742150
Alignment:
Q  54 taaggtaagggggttagtctttatcataatc 84  Q
    |||||||||||||||||||||||||||||||    
T  15742120 taaggtaagggggttagtctttatcataatc 15742150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 19629617 - 19629567
Alignment:
Q  117 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 167  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  19629617 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 19629567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 18823283 - 18823352
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  18823283 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 18823352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 18839138 - 18839207
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  18839138 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 18839207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 33324939 - 33324898
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  33324939 aaattcgtgctctaactaggatgatatgtttgtatgcatgaa 33324898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 1556344 - 1556288
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||    
T  1556344 taaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg 1556288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 13620711 - 13620767
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||||||  |||||||||||| || | |||||| ||| |||||    
T  13620711 taaggtaagggggttagtcttcttcataatcatgtacaatttttgcattttctcatg 13620767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 16232231 - 16232175
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  16232231 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 16232175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23148335 - 23148303
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  23148335 taaggtaagggggttagtcttcatcataatcat 23148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23153786 - 23153754
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  23153786 taaggtaagggggttagtcttcatcataatcat 23153754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 32276659 - 32276691
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  32276659 taaggtaagggggttagtcttcatcataatcat 32276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 54 - 312
Target Start/End: Complemental strand, 41997 - 41738
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| ||||||||||||||||||  || |||||| ||||  || | ||||| |||||||||| ||||| ||||||||||||||    
T  41997 taaggtaagggggttagtcttcatcataatcatgttcatttatttcaatttctcattgtt-gtatgaatatgggttgaattgaataaatggataattgtt 41899  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatg 252  Q
    | ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||    
T  41898 gttaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 41799  T
Q  253 aaaagttatgaaaattgtgcaaaatggatgaa-tttgacatgttgttgttgaattatgatg 312  Q
      ||||| |||||||||||   ||| | |||| ||||  ||||||||||||||||||||||    
T  41798 tgaagttgtgaaaattgtgttcaattggtgaattttgctatgttgttgttgaattatgatg 41738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 109; Significance: 9e-55; HSPs: 5)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 8092 - 8312
Alignment:
Q  54 taaggtaaggggg-ttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgt 151  Q
    ||||||||||||| |||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| |||||||||||||    
T  8092 taaggtaaggggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgt 8191  T
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||||| |||  | ||||| |||||    
T  8192 tgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattggtgataattgtatgattgttggtgaaattacaggttcaattatgtaaaaat 8291  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    |  ||||| ||||||||||||    
T  8292 gtgaagttgtgaaaattgtgc 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 139 - 270
Target Start/End: Original strand, 26414 - 26545
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| ||||| ||| ||||||||      
T  26414 aatgtataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcgtgaattgatgataattgtaagattattggtgaaagtacatgttca 26513  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgt 270  Q
    ||||||| ||||||| ||||| ||||||||||    
T  26514 aatatgtaaaaatgataagttgtgaaaattgt 26545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 26340 - 26379
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcatt 93  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26340 taaggtaagggggttagtctttatcataatcatgatcatt 26379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 6877 - 6934
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  6877 taggagttaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 12095 - 11989
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||| |||||||||||||||| |||||||||||||||| |  |||||| || || |   ||| |||||| |||||||    ||||||| |||||||||||    
T  12095 taagataagggggttagtcttcatcataatcatgttcaattattgcaacttctcctttgttgtatgaaacgggttgattgcaatgaattgataattgttg 11996  T
Q  154 ctaaatt 160  Q
     ||||||    
T  11995 ttaaatt 11989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 54 - 236
Target Start/End: Original strand, 34373 - 34556
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||| ||||||||  ||||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||||||||||||||| ||    
T  34373 taaggtaagagggttagttattatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaatgaatggataattatt 34472  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  34473 gctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 34556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 105; Significance: 2e-52; HSPs: 4)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 1387 - 1255
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |    
T  1387 atggataattgttgctaaattcgtgctccaactttgatgatatgttagtatgcatgaattgataataattgtatgattgttggtgaaattacatgttcaa 1288  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  1287 atatgtaaaaatgataagttgtgaaaattgtgc 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 3585 - 3714
Alignment:
Q  143 gataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaata 242  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||    
T  3585 gataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaata 3684  T
Q  243 tgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||| ||||||| ||||| ||||||||||||    
T  3685 tgtaaaaatgataagttgtgaaaattgtgc 3714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 1462 - 1430
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  1462 taaggtaagggggttagtctttatcataatcat 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 3508 - 3547
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcatt 93  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  3508 taaggtaagggggttagtctttgtcataatcatcttcatt 3547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 956 - 1103
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  956 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 1055  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    |||||| ||||| | ||||| ||||||||||||  ||| |||||||||    
T  1056 atatgtaaaaataataagttgtgaaaattgtgctcaattgatgaattt 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 882 - 919
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttca 91  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  882 taaggtaagggggttagtctttatcataatcatcttca 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 58 - 272
Target Start/End: Complemental strand, 48532 - 48318
Alignment:
Q  58 gtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgct 155  Q
    |||||||||||||||||  |||||||||||  |   || ||||||||||| | ||  ||| |||||||||||||    |||||||| |||||||||||||    
T  48532 gtaagggggttagtcttcttcataatcatgaatgttttgtttgcaattttccttg--ttgtatgaaatgggttggttggaatgaattgataattgttgct 48435  T
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| ||| ||||||| |    
T  48434 aaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgtaaaaatgata 48335  T
Q  256 agttatgaaaattgtgc 272  Q
    |||| ||||||||||||    
T  48334 agttgtgaaaattgtgc 48318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 20572 - 20493
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  20572 agaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 20493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 19470 - 19337
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||      
T  19470 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttca 19371  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||||| ||||||| ||||| ||||||||||||    
T  19370 aatatgtaaaaatgataagttgtgaaaattgtgc 19337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 21553 - 21421
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  21553 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 21454  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| ||||| ||||||||||||    
T  21453 atatgtaaaaatgataagttgtgaaaattgtgc 21421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 12376 - 12229
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| |    
T  12376 atggataattgttgctaaattcgtgctctaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaaatacatgtttaa 12277  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    || ||| ||||||| ||||| |||||||||||| |||| | |||||||    
T  12276 atgtgtaaaaatgataagttgtgaaaattgtgctaaattggtgaattt 12229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  12450 taaggtaagggggttagtctttatcataatcat 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 6064 - 6196
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  6064 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 6163  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||| | ||||| | ||||||||||    
T  6164 atatgtaaaaataataagttgtaaaaattgtgc 6196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 5990 - 6027
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttca 91  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5990 taaggtaagggggttagtctttatcataatcattttca 6027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 36912 - 37060
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||||      
T  36912 aatggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagcttgttggtgaaattacatgttca 37011  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||||||| ||||||| ||||| |||||||||||| |||| | |||||||    
T  37012 aatatgtaaaaatgataagttgtgaaaattgtgctaaattggtgaattt 37060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 15319 - 15398
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||  || ||||||||||    
T  15319 agaatcataggagcaaaagtgaagcttgggctaatagttggagataattaaggtaagggggttagcattcatcataatca 15398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 36836 - 36869
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||||    
T  36836 ttaaggtaagggggttagtctttatcataatcat 36869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 48861 - 48729
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  48861 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 48762  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||| |  ||||||| ||||| ||||||||||||    
T  48761 ataggaaaaaatgataagttgtgaaaattgtgc 48729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 36323 - 36210
Alignment:
Q  174 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 273  Q
    ||||| |||||||||||| ||||||||||  || |||||||||||||||| ||||||||| ||   |||||  ||||||| |||||||||| |||||||     
T  36323 tgatgttatgtttgtatgtatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatgaagattgtgct 36224  T
Q  274 aaatggatgaattt 287  Q
    |||| | |||||||    
T  36223 aaattggtgaattt 36210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 48935 - 48903
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  48935 taaggtaagggggttagtctttatcataatcat 48903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 61122 - 61191
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  61122 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 61191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 153924 - 153980
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  153924 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 153980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 51182 - 51314
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  51182 atggataattgttgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 51281  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||| || ||||||| ||||| ||||||||||||    
T  51282 ataggtaaaaatgataagttgtgaaaattgtgc 51314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 88; Significance: 3e-42; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 9111 - 8980
Alignment:
Q  141 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 240  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  9111 tggataattgttgctaaattcgtgctccatctgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 9012  T
Q  241 tatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||  ||||| ||||||||||||    
T  9011 tatgtaaaaatgtgaagttgtgaaaattgtgc 8980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 143 - 272
Target Start/End: Complemental strand, 148981 - 148852
Alignment:
Q  143 gataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaata 242  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||||    
T  148981 gataattgttgttaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaata 148882  T
Q  243 tgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||| ||||||| ||||| ||||||||||||    
T  148881 tgtaaaaatgataagttgtgaaaattgtgc 148852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 146938 - 146906
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  146938 taaggtaagggggttagtctttatcataatcat 146906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 533 - 630
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  533 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 123163 - 123296
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  123163 aatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 123262  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  123263 aataggaacaaatgataagttgtgaaaattgtgc 123296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 5060 - 5193
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||| ||||||||| |||||||||| ||| ||||||||      
T  5060 aatggataattgttgctaaattcgtactccaactgtgacgatatgtttgtatgcgtgaattgatgataattgtaagattgttggtgaaagtacatgttca 5159  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||||| ||||||| ||||| ||||||||||||    
T  5160 aatatgtaaaaatgataagttgtgaaaattgtgc 5193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 89453 - 89550
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  89453 aatggataattgttgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 89550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 107783 - 107835
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatg 191  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  107783 aatggataatttttgctaaattcgtgctccaactgtgatgatatatttgtatg 107835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 79786 - 79731
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 210  Q
    |||||||||| | |||| |||||||||||||||||||||| ||||||| |||||||    
T  79786 aaattcgtgcactaactatgatgatatgtttgtatgcatgaaattgatgataattg 79731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 86
Target Start/End: Complemental strand, 130911 - 130880
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  130911 aaggtaagggggttagtctttatcataatcat 130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 41992 - 41860
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||   ||||||||| |||||||||| |  |    
T  41992 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtcatattgttggtgaaattacatgctcaa 41893  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||||| ||||||| || || ||||||||||||    
T  41892 atatgtaaaaatgataatttgtgaaaattgtgc 41860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 42066 - 42034
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||| |||||||||||||||||    
T  42066 taaggtaagggggttggtctttatcataatcat 42034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 128169 - 128265
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 236  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  128169 atggataattgttgctaaattcgtgcttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgtt 128265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 31697 - 31787
Alignment:
Q  174 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaa 264  Q
    ||||| |||||||| ||||||||||||||  || |||||||||||||||| ||||||||| ||   |||||  ||||||| ||||||||||    
T  31697 tgatgttatgtttgaatgcatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatgaa 31787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 128095 - 128147
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 108  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||    
T  128095 taaggtaagggggttagtctttatcataatcatcttcat--tttgcaaattttca 128147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 172168 - 172021
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||  |    
T  172168 atggataactgttgctaaatacgtgctccaactgtgatgatatgtttgtatggatgaattgatgataattgtatgattgatggtgaaattacatgttcaa 172069  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||| |   |||||| ||||| |||||||||||| |||| | |||||||    
T  172068 ataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattt 172021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 177871 - 177724
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||  |    
T  177871 atggataactgttgctaaatacgtgctccaactgtgatgatatgtttgtatggatgaattgatgataattgtatgattgatggtgaaattacatgttcaa 177772  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||| |   |||||| ||||| |||||||||||| |||| | |||||||    
T  177771 ataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattt 177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 172242 - 172210
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  172242 taaggtaagggggttagtctttatcataatcat 172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 177945 - 177913
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  177945 taaggtaagggggttagtctttatcataatcat 177913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 108004 - 107878
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| ||     
T  108004 aattgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgc 107905  T
Q  246 gaaaatgaaaagttatgaaaattgtgc 272  Q
     ||||||| ||||| | ||||||||||    
T  107904 aaaaatgataagttgtaaaaattgtgc 107878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 64527 - 64648
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaatt-----gataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaa 250  Q
    ||||||||||||   || ||||| ||||||| ||||||||||||     ||| || ||||||||||||||||| ||||||||||||| ||||||| ||||    
T  64527 aaattcgtgctcttgctgtgatgttatgtttatatgcatgaattatattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaa 64626  T
Q  251 tgaaaagttatgaaaattgtgc 272  Q
    ||| |||||||||| |||||||    
T  64627 tgataagttatgaatattgtgc 64648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 89863 - 89905
Alignment:
Q  155 taaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  89863 taaattcgtgctccaactatgatgatatgtttgtatgcatgaa 89905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 247441 - 247574
Alignment:
Q  139 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 238  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||  ||| ||||| ||||||      
T  247441 aatggataattgttgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgagggtgaaatttcatgttca 247540  T
Q  239 aatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    |||| |   |||||| ||||| ||||||||||||    
T  247541 aataggaacaaatgataagttgtgaaaattgtgc 247574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 34075 - 34150
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttga 130  Q
    ||||||||||||||||||||| |||||||||||||||| | |||||| ||| ||||   ||| ||||||||||||||    
T  34075 taaggtaagggggttagtcttcatcataatcatgttcaatttttgcattttctcat-tgttgtatgaaatgggttga 34150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 247366 - 247398
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  247366 taaggtaagggggttagtctttatcataatcat 247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 9141 - 9009
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    ||||| ||||||||||||||||||||||||  | ||||| ||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||  |    
T  9141 atggaaaattgttgctaaattcgtgctccatttgtgatgttatgtttgtatgcatgaatcgatgataattgtaagattgttggtgaaattacatgttcaa 9042  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
     ||||| ||||||  ||||| ||||||||||||    
T  9041 ttatgtaaaaatgttaagttgtgaaaattgtgc 9009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 9215 - 9163
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 108  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||    
T  9215 taaggtaagggggttagtctttatcataatcatcttcat--tttgcaaattttca 9163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 13325 - 13445
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||| ||||||||||  | | ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  13325 tgctagattcgtgctcttagtgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 13424  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || ||||| ||||||| ||||    
T  13425 gataagttgtgaaaatggtgc 13445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 283 - 167
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 255  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||| ||||||| |    
T  283 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 184  T
Q  256 agttatgaaaattgtgc 272  Q
    ||||||| | |||||||    
T  183 agttatgtatattgtgc 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 30497 - 30417
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||| ||| ||||||||||| ||| || || |||| |||||||||||||||||||||| | || |||||||||||    
T  30497 agaatcatagaagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttatttttcatcataatcat 30417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 80267 - 80187
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  80267 agaatcataggagcaaaagtgaagcttgagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 80187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 3536 - 3360
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    |||||||||||| ||| ||||  |||||||||||||||||  ||||||||| || |  ||  | |||||||||||||  ||||| |||||||||||| ||    
T  3536 taaggtaagggg-ttattcttcctcataatcatgttcatttattgcaatttctccttgttatg-tgaaatgggttgat-tgaataaatggataattgatg 3440  T
Q  154 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacat 233  Q
    |||||||||||||| | || ||||| || ||||||||||||||||| || ||| |||||||||||||||| |||||||||    
T  3439 ctaaattcgtgctctagctgtgatgttaagtttgtatgcatgaattaatgatatttgtatgattgttggtgaaattacat 3360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 3220 - 3094
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    |||| |||||||||||||||||   || ||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||  | |||||    
T  3220 aattcttgctaaattcgtgctcttgctgtgatgttatgtttgtatccatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgt 3121  T
Q  246 gaaaatgaaaagttatgaaaattgtgc 272  Q
     ||||||  ||||| ||||||||||||    
T  3120 aaaaatgtgaagttgtgaaaattgtgc 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 9371 - 9469
Alignment:
Q  174 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||| ||||    
T  9371 tgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgc 9469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 16269 - 16367
Alignment:
Q  174 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||| ||||    
T  16269 tgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgc 16367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 31132 - 31212
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31132 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 31212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 56020 - 56196
Alignment:
Q  61 agggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaatt 160  Q
    |||||||||||||| |||||||||||||||| |  |||||| || ||     ||| ||||||| ||||||   |||||||| ||||||||||| ||||||    
T  56020 agggggttagtcttcatcataatcatgttcaattattgcaacttctcccttgttgtatgaaattggttgattggaatgaatagataattgttgttaaatt 56119  T
Q  161 cgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||| |||| ||||| ||| || || ||||||| ||||| |||||||||||||||| | | |||||||||||||    
T  56120 cgtgctctaactgtgatgttattttcgtgtgcatgatttgatgataattgtatgattgtggctgaaattacatgttt 56196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 43226 - 43114
Alignment:
Q  175 gatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaa 274  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||  |||||||||| ||||||| |    
T  43226 gatgttatgtttctatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagttatgaagattgtgcta 43127  T
Q  275 aatggatgaattt 287  Q
    ||| | |||||||    
T  43126 aattggtgaattt 43114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 39441 - 39386
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  39441 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 39386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 166116 - 166196
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  166116 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 166196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 162036 - 162110
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  162036 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 162110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 116410 - 116483
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||  || |||||||||||    
T  116410 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagatttcatcataatcat 116483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 272288 - 272141
Alignment:
Q  140 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 239  Q
    |||||||| | ||||||||| ||| |||||||| | |||||||||||||||| |||||||||| ||||||||||||||| |||  ||||||||||||  |    
T  272288 atggataaatattgctaaatacgtactccaactgtaatgatatgtttgtatgaatgaattgatgataattgtatgattgatggagaaattacatgttcaa 272189  T
Q  240 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaattt 287  Q
    ||| |   |||||| ||||| |||||||||||| |||| | |||||||    
T  272188 ataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattt 272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 272362 - 272330
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  272362 taaggtaagggggttagtctttatcataatcat 272330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5735 - 5809
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  5735 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 5809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5941 - 6015
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  5941 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 5254 - 5335
Alignment:
Q  190 tgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 271  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  5254 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttatgaaaattgtg 5335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 102923 - 102963
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  102923 aattcgtgctccaattatgatgatatgtttgaatgcatgaa 102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 1304 - 1424
Alignment:
Q  152 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 251  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  1304 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 1403  T
Q  252 gaaaagttatgaaaattgtgc 272  Q
    || |||||||||| |||||||    
T  1404 gataagttatgaatattgtgc 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 14083 - 14181
Alignment:
Q  174 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 272  Q
    ||||| ||||| ||||||||||||||||| |||||| |||||||||| || ||||||||||||  ||||||| ||||||| |||||||||| |||||||    
T  14083 tgatgttatgtctgtatgcatgaattgatgataattatatgattgttagtgaaattacatgttgaaatatgtaaaaatgataagttatgaagattgtgc 14181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 21110 - 21233
Alignment:
Q  146 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 245  Q
    |||| |||||||||||||||||    | ||||| ||||||||||| ||| ||||||| |||||| |||||||||| || ||||||||||||  |||||||    
T  21110 aattcttgctaaattcgtgctcttgttgtgatgttatgtttgtatccattaattgatgataattatatgattgttagtgaaattacatgttcaaatatgt 21209  T
Q  246 gaaaatgaaaagttatgaaaattg 269  Q
     ||||||| |||||||||| ||||    
T  21210 aaaaatgataagttatgaagattg 21233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 304 - 384
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  304 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaacggggttattctttatcataatcat 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 1780 - 1701
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  1780 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 19802 - 19881
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  19802 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 24106 - 24185
Alignment:
Q  6 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||| ||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  24106 agaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 24185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 3936 - 3854
Alignment:
Q  190 tgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt-gaaaatgaaaagttatgaaaattgtg 271  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||  |||||||  ||||||| |||||||| ||||||||    
T  3936 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaaatgataagttatggaaattgtg 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 6e-16; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 13267 - 13379
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttg 153  Q
    ||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||  ||| ||||||||||||||   |||||||| |||||||||||    
T  13267 taaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg--ttgtatgaaatgggttgattggaatgaattgataattgttg 13364  T
Q  154 ct-aaattcgtgctc 167  Q
     | ||||||||||||    
T  13365 ttaaaattcgtgctc 13379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 55936 - 55904
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  55936 taaggtaagggggttagtctttatcataatcat 55904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 108075 - 108107
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  108075 taaggtaagggggttagtctttatcataatcat 108107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 93773 - 93814
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    ||||||||||||||| | ||||||||||| ||||||||||||    
T  93773 aaattcgtgctccaattatgatgatatgtatgtatgcatgaa 93814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 104623 - 104691
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgca-tgaattgataataattgtatgattgttggt 223  Q
    |||||| ||||| |||| |||||||||||||||||||| | ||||||| ||||||| ||  ||||||||    
T  104623 aaattcatgctctaactatgatgatatgtttgtatgcattaaattgatgataattgaattgttgttggt 104691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 164 - 94
Alignment:
Q  15 ggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  164 ggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 6261 - 6335
Alignment:
Q  11 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||| ||||||||||| ||| || |||| || |||||||||||||||||||||||| || ||||||||||    
T  6261 cataggagcaaaagtgaagcttgagttaatagtgggtgataattaaggtaagggggttagtgttcatcataatca 6335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 4 - 41
Alignment:
Q  48 gataattaaggtaagggggttagtctttatcataatca 85  Q
    |||||||||||||||||||||||| || ||||||||||    
T  4 gataattaaggtaagggggttagtgttcatcataatca 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 237
Target Start/End: Original strand, 10256 - 10428
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||| |||||  ||||||||||||||| | |||||| ||| |||||  ||| |||||| ||||||||          || |||||||||    
T  10256 taaggtaagggggtttgtcttcttcataatcatgttcaatttttgcattttctcatg--ttgtatgaaaatgggttga----------tgaataattgtt 10343  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    |||||||||||||||   || ||||||||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  10344 gctaaattcgtgctcttgctgtgatgatattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 10428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 1363 - 1436
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||| ||||||||||||| ||||||| | |||| ||||||| |||||||||||||||  || |||||||||||    
T  1363 taggaactaaagtgaagcttgagctaggaattggtgataattgaggtaagggggttagaattcatcataatcat 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 8257 - 8176
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||| ||||||| ||  |||||||| || || ||||||    
T  8257 aaattcgtgctctaactatgatgatatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgtt 8176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 237
Target Start/End: Complemental strand, 45370 - 45197
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgtt 152  Q
    ||||||||||||||||||||| |||||||||||||||| |  ||||||||| ||||  || | |||||| ||||||||          || |||||||||    
T  45370 taaggtaagggggttagtcttcatcataatcatgttcaattattgcaatttctcattgtt-gtatgaaaatgggttga----------tgaataattgtt 45282  T
Q  153 gctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    | ||||||||||| |    | ||||| ||| ||  | ||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  45281 gttaaattcgtgcccttgttgtgatgctattttgatgtgcatgaattgatgataattgtatgattgtgggtgaaattacatgttt 45197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 54630 - 54583
Alignment:
Q  190 tgcatgaattgataataattgtatgattgttggttaaattacatgttt 237  Q
    ||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  54630 tgcatgaattgatgataattgtatgattgtgggtgaaattgcatgttt 54583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 54756 - 54701
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcat 109  Q
    |||||||||| |||||||||| |||||||||||||||| |  ||||||||| ||||    
T  54756 taaggtaaggtggttagtcttcatcataatcatgttcaattattgcaatttctcat 54701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 35873 - 35816
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  35873 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 35816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 70307 - 70361
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataatt 209  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||    
T  70307 aaattcgtactccaactatgatgatatgtttgtatgcatgaaattgatgataatt 70361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 57392 - 57424
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  57392 taaggtaagggggttagtctttatcataatcat 57424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 499 - 442
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| ||||||| | |||| ||||| | |||||||||||||||    
T  499 taggagctaaagtgaagcttgagctaggaattggtgataactgaggtaagggggttag 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 1546 - 1587
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  1546 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 8691 - 8732
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 197  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  8691 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 76699 - 76756
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||  |||||||||||||||||||||||    
T  76699 taggagctaaagtgaagcttgggctaggaattgctgataattaaggtaagggggttag 76756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 193396 - 193429
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||||    
T  193396 ttaaggtaagggggttagtctttatcataatcat 193429  T

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Target: scaffold0761 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 1492 - 1548
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  |||||||||||||||||| | |||||| ||| |||||    
T  1492 taaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatg 1548  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 6443 - 6475
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  6443 taaggtaagggggttagtctttatcataatcat 6475  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 878 - 910
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  878 taaggtaagggggttagtctttatcataatcat 910  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9882 - 9914
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  9882 taaggtaagggggttagtctttatcataatcat 9914  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 13285 - 13317
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  13285 taaggtaagggggttagtctttatcataatcat 13317  T

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Target: scaffold0409 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 1348 - 1427
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcat-gaattgataataattgtatgattgttggttaaattacatg 234  Q
    |||||||||||| |||| |||||||||||||||||||||  ||||| | ||||||| ||  |||||||| ||||| ||||    
T  1348 aaattcgtgctctaactatgatgatatgtttgtatgcataaaattggtgataattggattgttgttggtgaaattgcatg 1427  T

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Target: scaffold0409; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 9603 - 9682
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcat-gaattgataataattgtatgattgttggttaaattacatg 234  Q
    |||||||||||| |||| |||||||||||||||||||||  ||||| | ||||||| ||  |||||||| ||||| ||||    
T  9603 aaattcgtgctctaactatgatgatatgtttgtatgcataaaattggtgataattggattgttgttggtgaaattgcatg 9682  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 29500 - 29445
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  29500 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 29445  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 31647 - 31592
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  31647 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 31592  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 10908 - 10854
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 210  Q
    ||||||||||| | || |||||||||||||||||||||| ||||||| |||||||    
T  10908 aattcgtgctctatctatgatgatatgtttgtatgcatgaaattgatgataattg 10854  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 22422 - 22476
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataatt 209  Q
    |||||||||||| || | |||||||||||||||||||||| ||||||| ||||||    
T  22422 aaattcgtgctctaaatatgatgatatgtttgtatgcatgaaattgatgataatt 22476  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 689 - 632
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | |||||||| ||||||||||||||    
T  689 taggagctaaagtgaagcttgggctaggaattagtgataattatggtaagggggttag 632  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 2772 - 2691
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  2772 aaattcgtgctctaattatgatgatatgtttggatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 2691  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 7056 - 6999
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||| ||||||||||||||    
T  7056 taggagctaaagtgaaggttgggctaggaattggtgataattatggtaagggggttag 6999  T

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Target: scaffold0367 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 17209 - 17278
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 122  Q
    ||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  17209 taaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 17278  T

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Target: scaffold0173 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 5581 - 5548
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatg 87  Q
    ||||||||||||||||||||| ||||||||||||    
T  5581 taaggtaagggggttagtcttcatcataatcatg 5548  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 22429 - 22510
Alignment:
Q  156 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||| ||||  ||| ||||||||||||||||| ||||||| ||||||| ||  |||||||| || || ||||||    
T  22429 aaattcgtgctctaactaggataatatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgtt 22510  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 43651 - 43708
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  43651 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 43708  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 31414 - 31357
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  31414 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 31357  T

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Target: scaffold1500 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 1431 - 1487
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 110  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  1431 taaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 1487  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 5476 - 5508
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  5476 taaggtaagggggttagtcttcatcataatcat 5508  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 4346 - 4378
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||| |||||||||||||||    
T  4346 taaggtaagggggttagactttatcataatcat 4378  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 2317 - 2397
Alignment:
Q  157 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 236  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  2317 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 2397  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17304 - 17336
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||| |||||||||||||||||||||||    
T  17304 taaggtaagcgggttagtctttatcataatcat 17336  T

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Target: scaffold0207 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 18058 - 18026
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  18058 taaggtaagggggttagtcttcatcataatcat 18026  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 34308 - 34340
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  34308 taaggtaagggggttagtcttcatcataatcat 34340  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||| ||||||||||||||    
T  12418 taaggtaagggggttagtttttatcataatcat 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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