View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18859_low_9 (Length: 283)
Name: NF18859_low_9
Description: NF18859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18859_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 39560410 - 39560158
Alignment:
| Q |
12 |
tatacttatatgacttgtattcgaatgcaacatagaccaaggcataaccaacggttatataatgagtttagactaggatcttacaaattgctgagtaaat |
111 |
Q |
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| T |
39560410 |
tatacttatatgacttgtattcgaatgcaacatagaccaaggcataaccaacggttatataatgagtttagactaggatcttacaaattgctgagtaaat |
39560311 |
T |
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| Q |
112 |
atatataacagaaaataacattaaagagtggcatgccaacacttttacccatccaatatagaaagccaaattaacctccattagagagcctcttgtaaag |
211 |
Q |
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| T |
39560310 |
atatataacagaaaata-cattaaagagtggcatgccaacacttttacccatccaatatagaaagccaaattaacctccattagagtgcctcttgtaaag |
39560212 |
T |
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| Q |
212 |
aaagaactccaatttgattatacatgttacattaattatcctgcaaaaggagat |
265 |
Q |
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| T |
39560211 |
aaagaactccaatttgattatacatgttacattaattatcctgcaaaaggagat |
39560158 |
T |
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