View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18863_high_17 (Length: 203)
Name: NF18863_high_17
Description: NF18863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18863_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 38844703 - 38844894
Alignment:
| Q |
1 |
aataccatacaagttaaattgcaagatgcagaaatcttcaaagatcacaataagccttttcttagacgaactattatatctgaatattagaaaacaataa |
100 |
Q |
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| T |
38844703 |
aataccatacaagttaaattgcaagatgcagagatcttcaaagatcacaataagccttttcttagacgaactattata-ctgaatattagaaaacaataa |
38844801 |
T |
|
| Q |
101 |
aaattattccttttgattcctaaaattcttgcagcctgattcttaattaacataaatttgtgtagttttttactaccctccttaactcctttg |
193 |
Q |
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| T |
38844802 |
aaattattccttttgattcctaaaattcttgcagcctgattcttaattaacataaatttgtgtagttttttaccaccctccttaactcatttg |
38844894 |
T |
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