View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18863_low_4 (Length: 553)

Name: NF18863_low_4
Description: NF18863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18863_low_4
NF18863_low_4
[»] chr2 (7 HSPs)
chr2 (3-474)||(13945130-13945594)
chr2 (3-474)||(14086319-14086783)
chr2 (244-533)||(24992608-24992899)
chr2 (393-478)||(9509913-9509998)
chr2 (393-478)||(18655325-18655410)
chr2 (393-478)||(27166129-27166214)
chr2 (393-478)||(45018457-45018542)
[»] chr6 (10 HSPs)
chr6 (355-533)||(27747144-27747322)
chr6 (244-533)||(8998401-8998692)
chr6 (244-533)||(9007570-9007862)
chr6 (361-532)||(17946105-17946276)
chr6 (278-418)||(11377388-11377527)
chr6 (355-453)||(25898162-25898260)
chr6 (393-478)||(16902053-16902138)
chr6 (393-478)||(18164172-18164257)
chr6 (393-478)||(24928314-24928399)
chr6 (393-478)||(31360926-31361011)
[»] chr7 (10 HSPs)
chr7 (244-533)||(610287-610578)
chr7 (390-478)||(9541389-9541477)
chr7 (393-478)||(5388064-5388149)
chr7 (393-478)||(6538584-6538669)
chr7 (393-478)||(8505156-8505241)
chr7 (393-478)||(16138333-16138418)
chr7 (393-478)||(26354448-26354533)
chr7 (393-478)||(32102487-32102572)
chr7 (393-478)||(44901464-44901549)
chr7 (393-478)||(46501221-46501306)
[»] chr5 (11 HSPs)
chr5 (244-533)||(724638-724929)
chr5 (251-533)||(15326927-15327211)
chr5 (251-533)||(18711558-18711842)
chr5 (355-453)||(24296793-24296891)
chr5 (363-453)||(24416304-24416394)
chr5 (363-453)||(30450814-30450904)
chr5 (393-478)||(18383847-18383932)
chr5 (393-478)||(20951968-20952053)
chr5 (393-478)||(26198474-26198559)
chr5 (393-478)||(33943427-33943512)
chr5 (271-303)||(23915162-23915194)
[»] chr4 (6 HSPs)
chr4 (244-533)||(115703-115994)
chr4 (251-533)||(14935860-14936144)
chr4 (363-453)||(54695998-54696088)
chr4 (393-478)||(6696325-6696410)
chr4 (393-478)||(16269163-16269248)
chr4 (270-342)||(17132939-17133011)
[»] scaffold0096 (1 HSPs)
scaffold0096 (244-533)||(52570-52861)
[»] chr8 (7 HSPs)
chr8 (251-533)||(45495368-45495652)
chr8 (390-478)||(22834842-22834930)
chr8 (363-453)||(20748095-20748185)
chr8 (281-342)||(19754300-19754361)
chr8 (355-453)||(18236395-18236493)
chr8 (355-453)||(18245846-18245944)
chr8 (393-478)||(21209119-21209204)
[»] chr3 (7 HSPs)
chr3 (281-533)||(19688392-19688643)
chr3 (244-416)||(25507621-25507795)
chr3 (365-463)||(2158928-2159026)
chr3 (393-478)||(6426414-6426499)
chr3 (393-478)||(8976953-8977038)
chr3 (393-478)||(9541242-9541327)
chr3 (393-478)||(16405716-16405801)
[»] scaffold0021 (1 HSPs)
scaffold0021 (244-518)||(166832-167108)
[»] scaffold0049 (2 HSPs)
scaffold0049 (355-529)||(18656-18830)
scaffold0049 (390-478)||(84737-84825)
[»] scaffold0028 (2 HSPs)
scaffold0028 (355-533)||(85448-85626)
scaffold0028 (363-453)||(100512-100602)
[»] scaffold0500 (1 HSPs)
scaffold0500 (355-533)||(9611-9789)
[»] scaffold0313 (1 HSPs)
scaffold0313 (393-478)||(13664-13749)
[»] scaffold0003 (1 HSPs)
scaffold0003 (393-478)||(149120-149205)
[»] scaffold0141 (1 HSPs)
scaffold0141 (390-478)||(29987-30075)
[»] scaffold0058 (1 HSPs)
scaffold0058 (390-478)||(62523-62611)


Alignment Details
Target: chr2 (Bit Score: 353; Significance: 0; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 3 - 474
Target Start/End: Original strand, 13945130 - 13945594
Alignment:
Q  3 gaagattcgttgaaccaagaaggaaactctctttaaacctaaatttgagggaggtttaagtttcaaaaacttaaggatgttcaacgaagcaatgctagca 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13945130 gaagattcattgaaccaagaaggaaactctctttaaacctaaatttgagggaggtttaggtttcaaaaacttaaggatgttcaacgaagcaatgctagca 13945229  T
Q  103 aaataagtttggagactccatgttaatacataatctcttattagtcaagtatataaggcgaactaatatccaacaactgatgtcattcatagcagattag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13945230 aaataagtttggagactccatgttaatacataatctcttattagtcaagtatataaggcgaactaatatccaacaactgatgtcattcatagcagattag 13945329  T
Q  203 gatcacaaccaagctgcacttggagaagcatccatcattctaaatattgaaaaatatttttgggc---aagcatcaacacttcttgctatattttgaaca 299  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  13945330 gatcacaaccaagctacacttggagaaccatccatcattctaaatattgaaaaatatttttgggcagaaagcatcaacacttcttgctatattttgaaca 13945429  T
Q  300 aagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgtt 399  Q
    ||||||| |||||         |||||||| |||||||||||||||         |||| ||||||||||||||||||||||||||||||||||||||||    
T  13945430 aagtgtcgataag---------aaacaaaatcacgtatgaactatg-aaaaaaaagaaagccaaacatttcatattttcgtatctttcaatgttattgtt 13945519  T
Q  400 acattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactcta 474  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13945520 acattttaaacaataaggaaaatttaggcaagtttgattaaaaatcagacaaagctatatttctgggatactcta 13945594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 3 - 474
Target Start/End: Original strand, 14086319 - 14086783
Alignment:
Q  3 gaagattcgttgaaccaagaaggaaactctctttaaacctaaatttgagggaggtttaagtttcaaaaacttaaggatgttcaacgaagcaatgctagca 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14086319 gaagattcattgaaccaagaaggaaactctctttaaacctaaatttgagggaggtttaggtttcaaaaacttaaggatgttcaacgaagcaatgctagca 14086418  T
Q  103 aaataagtttggagactccatgttaatacataatctcttattagtcaagtatataaggcgaactaatatccaacaactgatgtcattcatagcagattag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14086419 aaataagtttggagactccatgttaatacataatctcttattagtcaagtatataaggcgaactaatatccaacaactgatgtcattcatagcagattag 14086518  T
Q  203 gatcacaaccaagctgcacttggagaagcatccatcattctaaatattgaaaaatatttttgggc---aagcatcaacacttcttgctatattttgaaca 299  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  14086519 gatcacaaccaagctacacttggagaaccatccatcattctaaatattgaaaaatatttttgggcagaaagcatcaacacttcttgctatattttgaaca 14086618  T
Q  300 aagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgtt 399  Q
    ||||||| |||||         |||||||| |||||||||||||||         |||| ||||||||||||||||||||||||||||||||||||||||    
T  14086619 aagtgtcgataag---------aaacaaaatcacgtatgaactatg-aaaaaaaagaaagccaaacatttcatattttcgtatctttcaatgttattgtt 14086708  T
Q  400 acattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactcta 474  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14086709 acattttaaacaataaggaaaatttaggcaagtttgattaaaaatcagacaaagctatatttctgggatactcta 14086783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 244 - 533
Target Start/End: Original strand, 24992608 - 24992899
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  ||| || || || |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  24992608 aaatgttgagaaatatttttgggcagaagccataaatacatcttgctacattttaaacagagtttcaataagaaaatttttaaacaaaaccccgtatgaa 24992707  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| ||| ||||||| ||||||| ||| |||  ||| |||||||| ||||||||||| ||||| ||   ||  || ||||||| |    
T  24992708 ctctggaaagaaa-gaaagccagacatttcttattttcatatttttggatgctattgttatattttaaacaacaaagataacctagaaaaatttgattca 24992806  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    || |||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  24992807 aagtcagacaaagctatatttcttggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 24992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 9509998 - 9509913
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  9509998 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 9509913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 18655325 - 18655410
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  18655325 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 18655410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 27166214 - 27166129
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||| |||||| | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  27166214 tattgctacattctgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 27166129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 45018457 - 45018542
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  45018457 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 45018542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 355 - 533
Target Start/End: Complemental strand, 27747322 - 27747144
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagc 454  Q
    |||| |||||||||||||||||||  ||||||  ||||||||| || ||| ||||||| ||||| |||  ||| |||||||||| ||||||||||||||     
T  27747322 gaaagccaaacatttcatattttcacatctttggatgttattgctatattctaaacaacaaagataatctaggaaagtttgattcaaaatcagacaaagg 27747223  T
Q  455 tatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
     |||||| | ||||| ||| | ||||||||||| |||||  | ||||||||||||||||||||| | ||||||||||||    
T  27747222 aatatttttgggatattcttccacatcaaaagcatacagaatttacaatttaagaacaagagttcttgaagaaagtatg 27747144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 244 - 533
Target Start/End: Original strand, 8998401 - 8998692
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  ||| || || || |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  8998401 aaatgttgagaaatatttttgggcagaagccataaatacatcttgctacattttaaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 8998500  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| ||| ||||||| ||||||| ||| |||  |||||||||||| ||||||||||| ||||| ||   ||| || ||||||| |    
T  8998501 ctctggaaagaaa-gaaagccagacatttcttattttcatatttttggatgttattgttatattttaaacaacaaagataacctaggaaaatttgattca 8998599  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  8998600 aaatcagacaaagctatatttcttggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 8998692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 244 - 533
Target Start/End: Original strand, 9007570 - 9007862
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  ||| || || || |||||||| ||||| || | ||| ||||||||||||  ||||||||||||| ||||||||    
T  9007570 aaatgttgagaaatatttttgggcagaagccataaatacatcttgctacattttaaatagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 9007669  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || |          |||| ||| ||||||| ||||||| ||| |||  |||||||||||| ||||||||||| ||||| ||   ||| || ||||||| |    
T  9007670 ctctagaaaagaaagaaagccagacatttcttattttcatatttttggatgttattgttatattttaaacaacaaagataacctaggaaaatttgattca 9007769  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    || |||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  9007770 aagtcagacaaagctatatttcttggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 9007862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 361 - 532
Target Start/End: Original strand, 17946105 - 17946276
Alignment:
Q  361 caaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatt 460  Q
    |||||||||||||||||| ||| |||  |||||||  |||||| || ||||| |||||||  |  || |||||||| | |||||||||||||||  ||||    
T  17946105 caaacatttcatattttcatatttttggatgttatctttacatcttgaacaacaaagacatcttgggaaagtttgactcaaaatcagacaaagcattatt 17946204  T
Q  461 tctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtat 532  Q
    | | ||||| ||  | |||||||||||||| ||  | || ||| |||||||||||| | |||||||||||||    
T  17946205 tttgggatattcatctacatcaaaagcctatagaatttataatctaagaacaagagctctagaagaaagtat 17946276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 418
Target Start/End: Original strand, 11377388 - 11377527
Alignment:
Q  278 acttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnnnnnnnnngaaatccaaacatttcatatttt 377  Q
    |||||||||||||| || |||||||| ||||||||||    ||||||||||||| |||||||||| ||         |||| ||||||||||||||||||    
T  11377388 acttcttgctatatcttaaacaaagtttcaataagaatttttttaaacaaaaccccgtatgaactctg-taaaggaagaaagccaaacatttcatatttt 11377486  T
Q  378 cgtatctttcaatgttattgttacattttaaacaataaaga 418  Q
    |  ||||||  ||||||||| |||||| ||||||| |||||    
T  11377487 cacatctttggatgttattgctacattctaaacaacaaaga 11377527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 453
Target Start/End: Original strand, 25898162 - 25898260
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    |||| ||||||||||| |||||||  ||||||   |||| ||| |||||||||||  ||||||| || | ||| || ||||||| ||||||||||||||    
T  25898162 gaaaaccaaacatttcttattttcacatctttggctgtttttgctacattttaaatgataaagaaaacttaggaaaatttgattcaaaatcagacaaag 25898260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 16902053 - 16902138
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  16902053 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 16902138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 18164172 - 18164257
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  18164172 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 18164257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 24928399 - 24928314
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  24928399 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 24928314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 31360926 - 31361011
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  31360926 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 31361011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 244 - 533
Target Start/End: Original strand, 610287 - 610578
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  ||| || || || |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  610287 aaatgttgagaaatatttttgggcagaagccataaatacatcttgctacattttaaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 610386  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| ||| ||||||| ||||||| ||| |||  |||||||||||| ||||||||||| ||||| ||   ||| || ||||||| |    
T  610387 ctctggaaagaaa-gaaagccagacatttcttattttcatatttttggatgttattgttatattttaaacaacaaagataacctaggaaaatttgattca 610485  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  610486 aaatcagacaaagctatatttcttggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 478
Target Start/End: Complemental strand, 9541477 - 9541389
Alignment:
Q  390 tgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||||||||||||  | ||||||||||| || |  || ||||||||||  |||||||| |||||||| ||| ||||||||||||||||    
T  9541477 tgttattgttacatactgaacaataaagaaaaattgggtaagtttgattctaaatcagataaagctatctttttaggatactctacaac 9541389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 5388149 - 5388064
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  5388149 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 5388064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 6538584 - 6538669
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  6538584 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 6538669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 8505156 - 8505241
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  8505156 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 8505241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 16138418 - 16138333
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  16138418 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 16138333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 26354533 - 26354448
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  26354533 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 26354448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 32102487 - 32102572
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  32102487 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 32102572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 44901464 - 44901549
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  44901464 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 44901549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 46501221 - 46501306
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  46501221 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 46501306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 244 - 533
Target Start/End: Complemental strand, 724929 - 724638
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  ||| || || || |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  724929 aaatgttgagaaatatttttgggcagaagccataaatacatcttgctacattttaaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 724830  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| ||| ||||||| ||||||| ||| |||  |||||||||||| ||||||||||| ||||| ||   ||| || ||||||| |    
T  724829 ctctggaaagaaa-gaaagccagacatttcttattttcatatttttggatgttattgttatattttaaacaacaaagataacctaggaaaatttgattca 724731  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  724730 aaatcagacaaagctatatttctcggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 724638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 533
Target Start/End: Complemental strand, 15327211 - 15326927
Alignment:
Q  251 gaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnn 347  Q
    ||||||||||||||||||  ||| || || || ||||||||||| ||||||| ||| ||||| ||||||  ||||||||||||| |||||||||| ||      
T  15327211 gaaaaatatttttgggcagaagccataaatacctcttgctatatcttgaacagagtttcaattagaaaagttttaaacaaaaccccgtatgaactctgga 15327112  T
Q  348 nnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcag 447  Q
           |||| ||||||||||||||||||| ||| |||   |||||||| |||||  ||||||||||||| | ||  || || ||||| | ||| ||||    
T  15327111 aaggaa-gaaagccaaacatttcatattttcatatttttggctgttattgctacatcctaaacaataaagatactttggggaaatttgactcaaagtcag 15327013  T
Q  448 acaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||| |||||| | ||||| ||| | || |||||||| || ||  | |||||| |||||||||||  | ||||||||||||||    
T  15327012 acaaagcaatatttttgggatattcttctacctcaaaagcatatagaatttacaatctaagaacaagaactctagaagaaagtatg 15326927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 533
Target Start/End: Original strand, 18711558 - 18711842
Alignment:
Q  251 gaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnn 347  Q
    ||||||||||||||||||  ||| || || || ||||||||||| ||||||| ||| ||||| ||||||  ||||||||||||| |||||||||| ||      
T  18711558 gaaaaatatttttgggcagaagccataaatacctcttgctatatcttgaacagagtttcaattagaaaagttttaaacaaaaccccgtatgaactttgga 18711657  T
Q  348 nnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcag 447  Q
           |||| ||||||||||||||||||| ||| |||   |||||||| |||||  ||||||||||||| |  |  || || ||||| | ||| ||||    
T  18711658 aaggaa-gaaagccaaacatttcatattttcatatatttggctgttattgctacatcctaaacaataaagataccttggggaaatttgactcaaagtcag 18711756  T
Q  448 acaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||| |||||| | ||||| ||| | || |||||||| || ||  | |||||| |||||||||||  | ||||||||||||||    
T  18711757 acaaagcaatatttttgggatattcttctacctcaaaagcatatagaatttacaatctaagaacaagaactctagaagaaagtatg 18711842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 453
Target Start/End: Complemental strand, 24296891 - 24296793
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    |||| ||||||||||| |||||||  ||||||   |||| ||| |||||||||||  ||||||| || | ||| || ||||||| ||||||||||||||    
T  24296891 gaaaaccaaacatttcttattttcacatctttggctgtttttgctacattttaaatgataaagaaaacttaggaaaatttgattcaaaatcagacaaag 24296793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 453
Target Start/End: Original strand, 24416304 - 24416394
Alignment:
Q  363 aacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    ||||| |||||||||| ||| |||  |||||||||||| ||||||||  ||||||| |||  ||| || ||||||| ||||||||| ||||    
T  24416304 aacatctcatattttcatatttttggatgttattgttatattttaaatgataaagaaaatctaggaaaatttgattcaaaatcagataaag 24416394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 453
Target Start/End: Complemental strand, 30450904 - 30450814
Alignment:
Q  363 aacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    ||||| |||||||||| ||| |||  |||||||||||| ||||||||  ||||||| |||  ||| || ||||||| ||||||||| ||||    
T  30450904 aacatctcatattttcatatttttggatgttattgttatattttaaatgataaagaaaatctaggaaaatttgattcaaaatcagataaag 30450814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 18383847 - 18383932
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  18383847 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 18383932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 20951968 - 20952053
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||| |||||| | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  20951968 tattgctacattctgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 20952053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 26198559 - 26198474
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  26198559 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 26198474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 33943427 - 33943512
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  33943427 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 33943512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 23915194 - 23915162
Alignment:
Q  271 catcaacacttcttgctatattttgaacaaagt 303  Q
    ||||||||||||||||||||||||| |||||||    
T  23915194 catcaacacttcttgctatattttggacaaagt 23915162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 244 - 533
Target Start/End: Original strand, 115703 - 115994
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  ||| || || || |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  115703 aaatgttgagaaatatttttgggcagaagccataaatacatcttgctacattttaaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 115802  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| ||| ||||||| ||||||| ||| |||  |||||||||||| ||||||||||| ||||| ||   ||| || ||||||| |    
T  115803 ctctggaaagaaa-gaaagccagacatttcttattttcatatttttggatgttattgttatattttaaacaacaaagataacctaggaaaatttgattca 115901  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  115902 aaatcagacaaagctatatttcttggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 115994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 533
Target Start/End: Original strand, 14935860 - 14936144
Alignment:
Q  251 gaaaaatatttttgggcaa---gcatcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnn 347  Q
    ||||||||||||||||||    |||| || || ||||||||||| ||||||| ||| ||||| ||||||  |||||| |||||| |||||||||| ||      
T  14935860 gaaaaatatttttgggcagaaggcataaatacctcttgctatatcttgaacagagtttcaattagaaaagttttaaaaaaaaccccgtatgaactctgga 14935959  T
Q  348 nnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcag 447  Q
           |||| ||||||||||||||||||| ||| |||   |||||||| ||||| |||||||||||||| |  |  || || ||||| | ||| ||||    
T  14935960 aaggaa-gaaagccaaacatttcatattttcatatatttggctgttattgctacatcttaaacaataaagataccttggggaaatttgactcaaagtcag 14936058  T
Q  448 acaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||| |||||| | ||||| ||| | ||||||||||| || ||  | |||||| |||||||||||  | || |||||||||||    
T  14936059 acaaagcaatatttttgggatattcttctacatcaaaagcatatagaatctacaatctaagaacaagaactctacaagaaagtatg 14936144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 453
Target Start/End: Complemental strand, 54696088 - 54695998
Alignment:
Q  363 aacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    ||||| |||||||||| ||| |||  |||||||||||| ||||||||  ||||||| |||  ||| || ||||||| ||||||||| ||||    
T  54696088 aacatctcatattttcatatttttggatgttattgttatattttaaatgataaagaaaatctaggaaaatttgattcaaaatcagataaag 54695998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 6696325 - 6696410
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  6696325 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 6696410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 16269163 - 16269248
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  16269163 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 16269248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 17132939 - 17133011
Alignment:
Q  270 gcatcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaact 342  Q
    ||||||||| |||||| |||||| | |||| |||  |||||||||| | ||| ||||||||||| ||||||||    
T  17132939 gcatcaacaattcttgatatattctaaacatagttccaataagaaagattttgaacaaaaccacatatgaact 17133011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 244 - 533
Target Start/End: Original strand, 52570 - 52861
Alignment:
Q  244 aaatattgaaaaatatttttgggca--ag-catcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| |||| |||||||||||||||  || ||| || || |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  52570 aaatgttgagaaatatttttgggcagaagacataaatacatcttgctacattttaaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 52669  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| ||| ||||||| ||||||| ||| |||  ||| |||||||| ||||||||||| ||||| ||   ||| || ||||||| |    
T  52670 ctctggaaagaaa-gaaagccagacatttcttattttcatatttttggatgatattgttatattttaaacaacaaagataacctaggaaaatttgattca 52768  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||||||||||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  52769 aaatcagacaaagctatatttcttggttactctgctacttcaaaagcatatagggtgtataacttgagaacaaaagttctagaagaaagtatg 52861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 533
Target Start/End: Complemental strand, 45495652 - 45495368
Alignment:
Q  251 gaaaaatatttttgggca--agc-atcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnn 347  Q
    ||||||||||||||||||  ||| || || || ||||||||||| ||||||| ||| ||||| ||||||  ||||||||||||| |||||||||| ||      
T  45495652 gaaaaatatttttgggcagaagccataaatacctcttgctatatcttgaacagagtttcaattagaaaagttttaaacaaaaccccgtatgaactctgga 45495553  T
Q  348 nnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcag 447  Q
           |||| ||||||||||||||||||| ||| |||   |||||||| ||||| |||||||||||||| |  |  || || ||||| | ||| ||||    
T  45495552 aaggaa-gaaaaccaaacatttcatattttcatatatttggctgttattgctacatcttaaacaataaagataccttggggaaatttgactcaaagtcag 45495454  T
Q  448 acaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||| |||||| | ||||| ||| | ||||||||||| || ||  | |||||| |||||||||||  | ||||||||||||||    
T  45495453 acaaagcaatatttttgggatattcttctacatcaaaagcatatagaatctacaatctaagaacaagaactctagaagaaagtatg 45495368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 22834842 - 22834930
Alignment:
Q  390 tgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||| |||||| | ||||||||||| || |  || ||||||||| | |||||||| |||||||| ||| ||||||||||||||||    
T  22834842 tgttattgctacattctgaacaataaagaaaaattgggtaagtttgatcataaatcagataaagctatctttttaggatactctacaac 22834930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 453
Target Start/End: Original strand, 20748095 - 20748185
Alignment:
Q  363 aacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    ||||| |||||||||| ||| |||  |||||||||||| |||||||| |||||||| |||  ||  |||||||||| ||||||||| ||||    
T  20748095 aacatctcatattttcatatttttggatgttattgttatattttaaataataaagaaaatctagaaaagtttgattcaaaatcagataaag 20748185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 19754300 - 19754361
Alignment:
Q  281 tcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaact 342  Q
    |||||||||||||| || | ||| ||||||||||||  ||||||||||||| ||||||||||    
T  19754300 tcttgctatattttaaatagagtctcaataagaaaagttttaaacaaaaccccgtatgaact 19754361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 453
Target Start/End: Original strand, 18236395 - 18236493
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    |||| ||||||||||| |||||||  ||||||   |||| ||| |||||||||||  ||||||| || | ||| || ||||||| ||||||||||||||    
T  18236395 gaaaaccaaacatttcttattttcacatctttggctgtttttgctacattttaaatgataaagaaaacttaggaaaatttgattcaaaatcagacaaag 18236493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 453
Target Start/End: Original strand, 18245846 - 18245944
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    |||| ||||||||||| |||||||  ||||||   |||| ||| |||||||||||  ||||||| || | ||| || ||||||| ||||||||||||||    
T  18245846 gaaaaccaaacatttcttattttcacatctttggctgtttttgctacattttaaatgataaagaaaacttaggaaaatttgattcaaaatcagacaaag 18245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Complemental strand, 21209204 - 21209119
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  21209204 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 21209119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 533
Target Start/End: Original strand, 19688392 - 19688643
Alignment:
Q  281 tcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaactatgnnnnnnnnngaaatccaaacatttcatattttcgt 380  Q
    |||||||| ||||| |||| ||| ||||||||||||  ||||||||||||| |||||||||| ||         |||| ||| ||||||| ||||||| |    
T  19688392 tcttgctacattttaaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaactctggaaagaaa-gaaagccagacatttcttattttcat 19688490  T
Q  381 atctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaacat 480  Q
    || |||  |||||||||||| ||||||||||| ||| | ||   ||| || ||||||| ||| |||||||||||||||||||| || ||||||   || |    
T  19688491 atttttggatgttattgttatattttaaacaacaaatataacctaggaaaatttgattcaaagtcagacaaagctatatttcttggttactctgttactt 19688590  T
Q  481 caaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  19688591 caaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 19688643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 244 - 416
Target Start/End: Complemental strand, 25507795 - 25507621
Alignment:
Q  244 aaatattgaaaaatatttttgggca--agca-tcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| ||||||||||||||||||||  || | | || || ||||||||||| ||||||| ||| ||||||||||||  ||||||||||||| ||||||||    
T  25507795 aaatgttgaaaaatatttttgggcagaagaaataaatacctcttgctatatcttgaacagagtttcaataagaaaagttttaaacaaaaccccgtatgaa 25507696  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaa 416  Q
    || ||         |||| | |||||||||||| |||| ||||||| ||||||||||||||||||| |||||||||    
T  25507695 ctctggaaaggaa-gaaagctaaacatttcatactttcatatctttgaatgttattgttacattttgaacaataaa 25507621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 463
Target Start/End: Original strand, 2158928 - 2159026
Alignment:
Q  365 catttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttct 463  Q
    |||| |||| |||| |||||||  |||||||||||||||||| ||||| ||||| ||||   | |||||||| |  || |||||||||||||| |||||    
T  2158928 cattgcatactttcatatctttggatgttattgttacattttgaacaacaaagataatttgagtaagtttgactctaagtcagacaaagctatttttct 2159026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 6426414 - 6426499
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  6426414 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 6426499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 8976953 - 8977038
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  8976953 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 8977038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 9541242 - 9541327
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  9541242 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 9541327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 16405716 - 16405801
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    |||||||||||  | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  16405716 tattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 16405801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 518
Target Start/End: Original strand, 166832 - 167108
Alignment:
Q  244 aaatattgaaaaatatttttgggca---agcatcaacacttcttgctatattttgaacaaagtgtcaataagaaaaaatttaaacaaaaccacgtatgaa 340  Q
    |||| ||||||| ||||||||||||   | ||| || |||||||||||||| || |||| ||| ||||||||||||  ||||||||||||| | ||||||    
T  166832 aaatgttgaaaagtatttttgggcagaaaccataaatacttcttgctatatcttaaacagagtttcaataagaaaagttttaaacaaaaccccatatgaa 166931  T
Q  341 ctatgnnnnnnnnngaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaa 440  Q
    || ||         |||| |||||||||||||||||||  ||||||  ||||||||| || ||| ||||||| ||||| | |    | ||||||||   |    
T  166932 ctctg-gaaagggagaaagccaaacatttcatattttcacatctttggatgttattgctatattctaaacaacaaagatagtctgagaaagtttgaccca 167030  T
Q  441 aaatcagacaaagctatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagtt 518  Q
    |||||||| ||||  |||||| | ||||| ||| | ||||||||||| |||||  | |||||||||||||||||||||    
T  167031 aaatcagataaaggaatatttttgggatattcttccacatcaaaagcttacagaatctacaatttaagaacaagagtt 167108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 529
Target Start/End: Original strand, 18656 - 18830
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagc 454  Q
    |||| |||||||||||||||||||  ||||||  ||| ||||| || ||| ||||||| | ||| | ||  || |||||||| | ||||||||||||||     
T  18656 gaaagccaaacatttcatattttcacatctttggatgctattgctatattctaaacaacagagatagtttgggaaagtttgactcaaaatcagacaaagg 18755  T
Q  455 tatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaag 529  Q
     |||||| | ||||| ||| | ||||||||||| |||||  | ||||||||||||||||||||| | ||||||||    
T  18756 aatatttttgggatattcttccacatcaaaagcttacagaatttacaatttaagaacaagagttcttgaagaaag 18830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 478
Target Start/End: Complemental strand, 84825 - 84737
Alignment:
Q  390 tgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||||||||| ||  | ||||||||||| ||||  || |||||||||   |||||||| | |||||| ||| ||||||||||||||||    
T  84825 tgttattgttatatactgaacaataaagaaaatttgggtaagtttgatcctaaatcagatatagctatctttttaggatactctacaac 84737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 533
Target Start/End: Original strand, 85448 - 85626
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagc 454  Q
    |||| ||||||||||| || |||| ||| |||  ||| |||||||| ||||||||||| ||||| ||   ||  || ||||||| ||| |||||||||||    
T  85448 gaaagccaaacatttcttaatttcatatttttggatgctattgttatattttaaacaacaaagagaacctagaaaaatttgattcaaagtcagacaaagc 85547  T
Q  455 tatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||| || |||||| | || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  85548 tatatttcttggttactctgctacttcaaaagcttatagggtgtataacttgagaacaaaagttctagaagaaagtatg 85626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 453
Target Start/End: Complemental strand, 100602 - 100512
Alignment:
Q  363 aacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaag 453  Q
    ||||| |||||||||| ||| |||  |||||||||||| ||||||||  ||||||| |||  ||| || ||||||| ||||||||| ||||    
T  100602 aacatctcatattttcatatttttggatgttattgttatattttaaatgataaagaaaatctaggaaaatttgattcaaaatcagataaag 100512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 533
Target Start/End: Original strand, 9611 - 9789
Alignment:
Q  355 gaaatccaaacatttcatattttcgtatctttcaatgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagc 454  Q
    |||| ||||||||||| ||||||| ||| |||  |||  ||||||| ||||||||||| ||||| ||   ||| || ||||||| ||| |||||||||||    
T  9611 gaaagccaaacatttcttattttcatatttttggatgcaattgttatattttaaacaacaaagataacctaggaaaatttgattcaaagtcagacaaagc 9710  T
Q  455 tatatttctaggatactctacaacatcaaaagcctacaggttatacaatttaagaacaagagttgtagaagaaagtatg 533  Q
    ||||||||| || |||||    || |||||||| || ||| | || || || ||||||| |||| ||||||||||||||    
T  9711 tatatttcttggttactcagatacttcaaaagcttatagggtgtataacttgagaacaaaagttatagaagaaagtatg 9789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 13664 - 13749
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||| |||||| | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  13664 tattgctacattctgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 13749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 149120 - 149205
Alignment:
Q  393 tattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||| |||||| | ||||||||||| || |  || |||||||||   |||||||| |||||||| ||| ||||||||||||||||    
T  149120 tattgctacattctgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatctttttaggatactctacaac 149205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 29987 - 30075
Alignment:
Q  390 tgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||||||||||||  | ||||||||||| || |  || |||||||||   |||||||| ||||||||  || ||||||||||||||||    
T  29987 tgttattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagataaagctatcgttttaggatactctacaac 30075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 478
Target Start/End: Complemental strand, 62611 - 62523
Alignment:
Q  390 tgttattgttacattttaaacaataaagacaattcaggcaagtttgattaaaaatcagacaaagctatatttctaggatactctacaac 478  Q
    ||||||||||||||  | ||||||||||| || |  || |||||||||   |||||||| | |||||| ||| ||||||||||||||||    
T  62611 tgttattgttacatactgaacaataaagaaaaattgggtaagtttgatcctaaatcagatatagctatctttttaggatactctacaac 62523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University