View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18864_low_12 (Length: 356)

Name: NF18864_low_12
Description: NF18864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18864_low_12
NF18864_low_12
[»] chr1 (21 HSPs)
chr1 (51-342)||(15615933-15616224)
chr1 (51-123)||(44530554-44530628)
chr1 (51-123)||(15289953-15290025)
chr1 (51-122)||(38531096-38531169)
chr1 (16-102)||(46506325-46506410)
chr1 (51-123)||(4102660-4102734)
chr1 (51-145)||(7763695-7763788)
chr1 (51-102)||(40614851-40614902)
chr1 (16-123)||(44455535-44455642)
chr1 (51-90)||(47263507-47263546)
chr1 (16-123)||(50937796-50937903)
chr1 (182-228)||(538931-538977)
chr1 (16-111)||(18237123-18237217)
chr1 (183-228)||(21248892-21248938)
chr1 (182-228)||(42694471-42694517)
chr1 (182-242)||(4051443-4051504)
chr1 (13-42)||(7784090-7784119)
chr1 (13-123)||(11352973-11353082)
chr1 (51-143)||(24855281-24855372)
chr1 (180-228)||(50846457-50846506)
chr1 (182-237)||(22888193-22888249)
[»] chr8 (28 HSPs)
chr8 (16-120)||(36245824-36245929)
chr8 (51-123)||(5784094-5784168)
chr8 (16-123)||(33745808-33745915)
chr8 (51-123)||(45260240-45260314)
chr8 (13-90)||(8073038-8073114)
chr8 (13-90)||(14548597-14548673)
chr8 (16-123)||(40784908-40785015)
chr8 (51-97)||(12824992-12825038)
chr8 (16-123)||(2152152-2152260)
chr8 (13-123)||(5593438-5593547)
chr8 (16-123)||(28579656-28579764)
chr8 (51-123)||(33980482-33980555)
chr8 (16-123)||(34490534-34490642)
chr8 (51-123)||(14699469-14699543)
chr8 (182-228)||(34872976-34873023)
chr8 (182-228)||(45509632-45509679)
chr8 (182-228)||(5059667-5059713)
chr8 (51-105)||(11483066-11483120)
chr8 (51-123)||(7683509-7683582)
chr8 (182-234)||(21159451-21159504)
chr8 (183-228)||(35139784-35139829)
chr8 (193-241)||(36195714-36195763)
chr8 (180-228)||(42148443-42148492)
chr8 (180-227)||(1691140-1691188)
chr8 (185-225)||(2489350-2489390)
chr8 (51-144)||(5951116-5951209)
chr8 (185-228)||(37828675-37828719)
chr8 (182-241)||(38389879-38389939)
[»] chr2 (15 HSPs)
chr2 (16-123)||(45628793-45628899)
chr2 (51-124)||(32511036-32511110)
chr2 (51-123)||(11852132-11852205)
chr2 (16-123)||(19353208-19353316)
chr2 (16-144)||(24973797-24973925)
chr2 (16-90)||(8030918-8030991)
chr2 (51-123)||(12360474-12360547)
chr2 (51-123)||(15228095-15228169)
chr2 (16-123)||(16844985-16845092)
chr2 (16-123)||(25624750-25624857)
chr2 (51-123)||(41003960-41004034)
chr2 (16-123)||(19034432-19034538)
chr2 (51-123)||(44573829-44573902)
chr2 (51-145)||(11386114-11386207)
chr2 (180-220)||(40768181-40768221)
[»] chr7 (23 HSPs)
chr7 (51-146)||(37913074-37913166)
chr7 (51-111)||(18751930-18751990)
chr7 (51-132)||(47657610-47657693)
chr7 (16-123)||(44547443-44547551)
chr7 (16-123)||(25950848-25950955)
chr7 (182-228)||(26339032-26339078)
chr7 (16-123)||(8290920-8291028)
chr7 (16-90)||(10071286-10071359)
chr7 (16-123)||(41003066-41003174)
chr7 (16-123)||(41026008-41026116)
chr7 (183-234)||(32457184-32457236)
chr7 (16-123)||(7449287-7449394)
chr7 (51-90)||(23364066-23364105)
chr7 (51-123)||(30895577-30895651)
chr7 (51-123)||(31803066-31803140)
chr7 (51-90)||(34895909-34895948)
chr7 (13-123)||(26255113-26255223)
chr7 (180-228)||(1023689-1023738)
chr7 (180-228)||(1694396-1694445)
chr7 (193-241)||(13752413-13752462)
chr7 (180-228)||(34327345-34327394)
chr7 (51-122)||(9233522-9233594)
chr7 (182-233)||(32860216-32860268)
[»] chr4 (24 HSPs)
chr4 (51-123)||(38899989-38900062)
chr4 (16-123)||(55014878-55014988)
chr4 (182-242)||(32800787-32800848)
chr4 (51-145)||(34948597-34948690)
chr4 (51-123)||(39184290-39184364)
chr4 (51-90)||(42598668-42598707)
chr4 (16-123)||(51536187-51536292)
chr4 (182-246)||(13401052-13401116)
chr4 (51-146)||(45097111-45097205)
chr4 (16-123)||(47228640-47228748)
chr4 (51-123)||(6083301-6083375)
chr4 (16-123)||(17609933-17610040)
chr4 (51-123)||(51335810-51335884)
chr4 (182-228)||(51863687-51863734)
chr4 (183-228)||(16078679-16078725)
chr4 (180-230)||(45776390-45776439)
chr4 (51-123)||(13389855-13389928)
chr4 (51-123)||(14793969-14794042)
chr4 (51-123)||(23621476-23621549)
chr4 (50-90)||(8418291-8418331)
chr4 (182-242)||(24552025-24552085)
chr4 (56-123)||(25708630-25708698)
chr4 (182-237)||(27553011-27553067)
chr4 (51-146)||(48030310-48030404)
[»] chr6 (10 HSPs)
chr6 (51-123)||(33487850-33487922)
chr6 (51-123)||(15287156-15287230)
chr6 (186-227)||(11369914-11369955)
chr6 (51-123)||(925879-925953)
chr6 (51-123)||(15498646-15498720)
chr6 (182-228)||(22734521-22734568)
chr6 (182-239)||(10839005-10839063)
chr6 (51-123)||(231053-231125)
chr6 (51-123)||(9299375-9299448)
chr6 (180-228)||(34674172-34674221)
[»] chr5 (21 HSPs)
chr5 (13-123)||(5527991-5528102)
chr5 (16-123)||(22581647-22581756)
chr5 (16-123)||(32147311-32147418)
chr5 (52-145)||(3160474-3160566)
chr5 (16-123)||(22657785-22657893)
chr5 (16-123)||(42561261-42561369)
chr5 (180-228)||(28838143-28838191)
chr5 (51-150)||(35547254-35547352)
chr5 (51-123)||(20988159-20988233)
chr5 (182-228)||(24363044-24363091)
chr5 (51-123)||(38161726-38161800)
chr5 (182-228)||(6899704-6899750)
chr5 (16-123)||(9268205-9268311)
chr5 (184-228)||(36976676-36976721)
chr5 (183-239)||(5244286-5244342)
chr5 (51-83)||(20517903-20517935)
chr5 (52-111)||(24308088-24308148)
chr5 (52-111)||(24365175-24365235)
chr5 (51-143)||(31507567-31507658)
chr5 (51-124)||(40951989-40952064)
chr5 (50-123)||(41641112-41641187)
[»] chr3 (30 HSPs)
chr3 (13-151)||(28673203-28673339)
chr3 (16-123)||(31533387-31533492)
chr3 (16-123)||(7051632-7051740)
chr3 (16-123)||(7886974-7887082)
chr3 (51-145)||(17698978-17699070)
chr3 (13-123)||(22832518-22832627)
chr3 (51-123)||(36317601-36317674)
chr3 (53-90)||(43557401-43557438)
chr3 (51-90)||(13809755-13809794)
chr3 (16-123)||(16435149-16435256)
chr3 (51-90)||(20877685-20877724)
chr3 (51-90)||(22527567-22527606)
chr3 (182-228)||(34661476-34661523)
chr3 (182-228)||(43081139-43081186)
chr3 (182-228)||(43140528-43140575)
chr3 (51-123)||(47066951-47067025)
chr3 (193-228)||(49220757-49220792)
chr3 (51-123)||(50517468-50517542)
chr3 (51-123)||(54107370-54107444)
chr3 (193-242)||(31184976-31185026)
chr3 (13-123)||(39952289-39952399)
chr3 (51-120)||(7886431-7886500)
chr3 (51-111)||(35572401-35572462)
chr3 (51-123)||(50726730-50726803)
chr3 (51-123)||(50786045-50786118)
chr3 (51-123)||(51284009-51284082)
chr3 (51-123)||(26806326-26806398)
chr3 (180-228)||(45388606-45388654)
chr3 (50-102)||(54604533-54604585)
chr3 (54-123)||(54849380-54849451)
[»] scaffold0674 (1 HSPs)
scaffold0674 (51-123)||(5168-5241)
[»] scaffold0549 (1 HSPs)
scaffold0549 (51-123)||(10129-10202)
[»] scaffold0240 (1 HSPs)
scaffold0240 (51-123)||(18514-18587)
[»] scaffold0019 (2 HSPs)
scaffold0019 (16-123)||(117863-117971)
scaffold0019 (182-228)||(43200-43246)
[»] scaffold0339 (1 HSPs)
scaffold0339 (16-123)||(7052-7160)
[»] scaffold0250 (1 HSPs)
scaffold0250 (16-147)||(9338-9467)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-123)||(355247-355321)
[»] scaffold2128 (1 HSPs)
scaffold2128 (183-240)||(601-659)
[»] scaffold0122 (1 HSPs)
scaffold0122 (13-123)||(12082-12192)
[»] scaffold0161 (1 HSPs)
scaffold0161 (51-123)||(3455-3528)
[»] scaffold0025 (1 HSPs)
scaffold0025 (51-153)||(65584-65684)
[»] scaffold0005 (1 HSPs)
scaffold0005 (51-123)||(45689-45762)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 51 - 342
Target Start/End: Complemental strand, 15616224 - 15615933
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaagatcttataataattagggatggatgtagtatttgtt 149  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||   |||||| ||| ||||||||||||    
T  15616224 taattaatgtagttgaaaatagcaaattgatcttataaaaatggacacaaaaattctcaaaaaaatcttataat---tagggacggaagtagtatttgtt 15616128  T
Q  150 ttctgtttcagtcgttcaannnnnnnn--aatgagactaaaatgtaaagttagtatatttataggaacaaaaacatatttatctctaaataaaatgattc 247  Q
    || |||||||||| |||||          || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15616127 ttttgtttcagtccttcaaattttttcttaaagagacaaaaatgtaaagttagtatatttataggaacaaaaacatatttatctctaaataaaatgattc 15616028  T
Q  248 atgaatttttacacccttattttgtttaaattaaagttgaagttatttaacccgtaagcatatctcaattacagggacaatggattgtaacatat 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||| ||||    
T  15616027 atgaatttttacacccttattttgtttaaattaaagttgaagttatttaacccataagcatatctcaattataggaacaatgcattgtaatatat 15615933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 44530554 - 44530628
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||  | ||||||||||||||  |||||||||    
T  44530554 taattaatgtagttggaaatagcaaaatgatcttataaaaatggacaaaaaaaattctcaaaaaagtcttataat 44530628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 15290025 - 15289953
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagatcttataat 123  Q
    |||||||||||||||||||||||||||   ||||||||||   |||| ||||||||||||| | |||||||||    
T  15290025 taattaatgtagttgaaaatagcaaatgagtcttataaaaagtgacaaaaaattctcaaaagggtcttataat 15289953  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 38531096 - 38531169
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataa 122  Q
    ||||||||||||||||||||||||||  ||||||||||||  ||||  | ||||||||||||| | ||||||||    
T  38531096 taattaatgtagttgaaaatagcaaagcgatcttataaaaagggacaaaaaaaattctcaaaagggtcttataa 38531169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 46506325 - 46506410
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa 102  Q
    ||||||||||||||| |||||||||||       | ||||||| |||||||||||||||||  | ||||||||||||||||| ||||    
T  46506325 atgtataataaataggggcatgtatgtaaagaagt-aattaatatagttgaaaatagcaaaagggtcttataaaagtggacaaaaaa 46506410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 4102660 - 4102734
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  ||||  | ||||||||||||| | |||||||||    
T  4102660 taattaatgtagttgaaaatagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataat 4102734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 7763695 - 7763788
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataataattagggatggatgtagtatt 145  Q
    ||||||||||||||| ||||||||||  ||||||||||||  ||||| ||||  ||||||||| | ||||||||   ||||||| ||| ||||||||    
T  7763695 taattaatgtagttggaaatagcaaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataa---ttagggacggaggtagtatt 7763788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 40614851 - 40614902
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa 102  Q
    ||||||||||||||||||||||||||  | |||||||||| |||||| ||||    
T  40614851 taattaatgtagttgaaaatagcaaaggggtcttataaaaatggacaaaaaa 40614902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 44455535 - 44455642
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | ||||||| |||||| ||||| ||||  ||||||||||||  ||||| |||| |||||||||| |    
T  44455535 atgtataataaataggggcatgtatgtaaagaaat-aattaatatagttggaaataacaaagagatcttataaaaaaggacaaaaaaattctcaaaaaaa 44455633  T
Q  115 tcttataat 123  Q
    |||||||||    
T  44455634 tcttataat 44455642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 47263546 - 47263507
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  47263546 taattaatgtagttgaaaatagcaaatgaatcttataaaa 47263507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 50937903 - 50937796
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||| |||| | ||||||||||  |||| | ||||||||||||| |     
T  50937903 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagaaaatgggtcttataaaaaaggacaaaaaaattctcaaaatgg 50937805  T
Q  115 tcttataat 123  Q
    |||||||||    
T  50937804 tcttataat 50937796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 538931 - 538977
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||| | |||||| |||||||||||||| ||||||||||||||    
T  538931 gactaaaacgaaaagttggtatatttataggatcaaaaacatattta 538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 18237217 - 18237123
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaa 111  Q
    |||||||||||||||| ||||||||||       | || ||||||||||| |||||||||||   ||||||||||  ||||| |||||||||||||    
T  18237217 atgtataataaatagaagcatgtatgtaaagaaat-aagtaatgtagttggaaatagcaaatgagtcttataaaaagggacaaaaaattctcaaaa 18237123  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 21248938 - 21248892
Alignment:
Q  183 actaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  21248938 actaaaatgaaaagttggtatatttataggaaccaaaaacatattta 21248892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 42694517 - 42694471
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||| | ||| |||||||||||||||| |||||||||||||||    
T  42694517 gactaaaacgaaaaattagtatatttatagggacaaaaacatattta 42694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 4051443 - 4051504
Alignment:
Q  182 gactaaaatgtaaagttagtatatttat-aggaacaaaaacatatttatctctaaataaaat 242  Q
    |||||||| | ||||||||||||||||| |||| |||||||||||||| ||  |||||||||    
T  4051443 gactaaaacgaaaagttagtatatttataaggaccaaaaacatatttaacttaaaataaaat 4051504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 7784119 - 7784090
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgt 42  Q
    ||||||||||||||||||||||||||||||    
T  7784119 aatatgtataataaatagaggcatgtatgt 7784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 11352973 - 11353082
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaa 112  Q
    |||||||||||||||||| || ||||||||       | |||||||||||||||||||| ||||  | ||||||||||  ||||| |||| | ||||||     
T  11352973 aatatgtataataaataggggtatgtatgtaaaataat-aattaatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaatttcaaaag 11353071  T
Q  113 gatcttataat 123  Q
    | |||||||||    
T  11353072 ggtcttataat 11353082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 24855372 - 24855281
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataataattagggatggatgtagta 143  Q
    |||||||||||||||||||||| ||||   ||||||||||  ||||  | ||||||||||||| | ||||   ||||||||||| ||||||||||    
T  24855372 taattaatgtagttgaaaatagaaaatgagtcttataaaaagggacaaaaaaaattctcaaaatggtctt---ataattagggacggatgtagta 24855281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 50846506 - 50846457
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttat-aggaacaaaaacatattta 228  Q
    |||||||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  50846506 gagactaaaatgaaaagttagtatatctataaggaccaaaaacatattta 50846457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 22888193 - 22888249
Alignment:
Q  182 gactaaaatgtaaagttagtatatttatag-gaacaaaaacatatttatctctaaat 237  Q
    |||||||||| |||||| |||||||||||| || |||||||||||||| | ||||||    
T  22888193 gactaaaatgaaaagtttgtatatttatagagaccaaaaacatatttaaccctaaat 22888249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 36245824 - 36245929
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||        ||||||||||||||||||||||||||| ||||||||||||  |||| | ||||||||||||| |     
T  36245824 atgtataataaataggggcatgtatgtaaaaaaaataattaatgtagttgaaaatagcaaatggatcttataaaaagggacaaaaaaattctcaaaaggg 36245923  T
Q  115 tcttat 120  Q
    ||||||    
T  36245924 tcttat 36245929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 5784094 - 5784168
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  ||||||||||||  ||||  | |||||||||||||||||||||||||    
T  5784094 taattaatgtagttggaaatagcaaaaggatcttataaaaagggacaaaaaaaattctcaaaaagatcttataat 5784168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 33745808 - 33745915
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  ||||||||||||  |||| | ||||||||||||| ||    
T  33745808 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaagggatcttataaaaagggacaaaaaaattctcaaaagga 33745906  T
Q  115 tcttataat 123  Q
    |||||||||    
T  33745907 tcttataat 33745915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 45260314 - 45260240
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||  | ||||||||||||| | |||||||||    
T  45260314 taattaatgtagttgaaaatagcaaatagattttataaaaatggacaaaaaaaattctcaaaagggtcttataat 45260240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 8073038 - 8073114
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    |||||||||||||||||| |||||||||||       | |||||||||||||||||||||||||  ||||||||||||    
T  8073038 aatatgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaatagcaaacagatcttataaaa 8073114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 14548597 - 14548673
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||  ||||||||||||    
T  14548597 aatatgtataataaatagaggcatgtatgtacataaa-taattaatatagttgaaaatagcaaagagatcttataaaa 14548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 40785015 - 40784908
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||||||||   ||||||||||  |||| | |||||||||||||||     
T  40785015 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagcaaatgagtcttataaaaagggacaaaaaaattctcaaaaagg 40784917  T
Q  115 tcttataat 123  Q
    |||||||||    
T  40784916 tcttataat 40784908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 12825038 - 12824992
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggaca 97  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||    
T  12825038 taattaatgtagttgaaaatagcaaaatgatcttattaaagaggaca 12824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 2152152 - 2152260
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||||||||| | ||||||||||  ||||  | ||||||||||||| |    
T  2152152 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagcaaataggtcttataaaaagggacaaaaaaaattctcaaaagg 2152250  T
Q  114 atcttataat 123  Q
     |||||||||    
T  2152251 gtcttataat 2152260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 5593547 - 5593438
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaa 112  Q
    |||||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  | |||||||||| ||   | |||||||||||||     
T  5593547 aatatgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggggtcttataaaaatgataaaaaaattctcaaaag 5593449  T
Q  113 gatcttataat 123  Q
    | |||||||||    
T  5593448 ggtcttataat 5593438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 28579764 - 28579656
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  ||||||||||||  ||||  | ||||||||||||| |    
T  28579764 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaagggatcttataaaaagggacaaaaaaaattctcaaaagg 28579666  T
Q  114 atcttataat 123  Q
     |||||||||    
T  28579665 gtcttataat 28579656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 33980555 - 33980482
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaagatcttataat 123  Q
    |||||||||||||||||||||||||||   ||||||||||  ||||| |||| ||||||||||  |||||||||    
T  33980555 taattaatgtagttgaaaatagcaaatgagtcttataaaaagggacaaaaaatttctcaaaaaagtcttataat 33980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 34490642 - 34490534
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||  | ||||||||||  ||||| ||||  |||||||||||    
T  34490642 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaaggggtcttataaaaagggacaaaaaaaattctcaaaaag 34490544  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  34490543 atcttataat 34490534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 14699543 - 14699469
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||| ||||  | ||||||||||  ||||  | ||||||||||||| |||||||||||    
T  14699543 taattaatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataat 14699469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 34872976 - 34873023
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  34872976 gactaaaatgaaaagttggtatatttataggaaccaaaaacatattta 34873023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 45509679 - 45509632
Alignment:
Q  182 gactaaaatgtaaagttagtatatttata-ggaacaaaaacatattta 228  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  45509679 gactaaaatgaaaagttagtatatttatagggaccaaaaacatattta 45509632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 5059713 - 5059667
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||| | ||||||||||||||||||||| ||| ||||||||||    
T  5059713 gactaaaacgaaaagttagtatatttataggaccaataacatattta 5059667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 11483066 - 11483120
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattc 105  Q
    |||||||||||||||||||||| ||| || ||||||||||  ||||| |||||||    
T  11483066 taattaatgtagttgaaaatagaaaagtggtcttataaaaagggacaaaaaattc 11483120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 7683509 - 7683582
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||||   ||||||||||  |||| | ||||||||||||||  |||||||||    
T  7683509 taattaatgtagttggaaatagcaaatgagtcttataaaaagggacaaaaaaattctcaaaaatgtcttataat 7683582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 21159451 - 21159504
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaac-aaaaacatatttatctcta 234  Q
    |||||||||| |||||||||||||||||| |||| |||| |||||||| |||||    
T  21159451 gactaaaatgaaaagttagtatatttataagaactaaaatcatatttaactcta 21159504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 35139829 - 35139784
Alignment:
Q  183 actaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||    
T  35139829 actaaaacgaaaagttagtatatttataggaccataaacatattta 35139784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 36195714 - 36195763
Alignment:
Q  193 aaagttagtatatttataggaa-caaaaacatatttatctctaaataaaa 241  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||| ||||    
T  36195714 aaagttagtatatttataggaaccaaaatcatatttaactctaaaaaaaa 36195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 42148492 - 42148443
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttata-ggaacaaaaacatattta 228  Q
    |||||||||| | |||||||||||||||||| ||| ||||||||||||||    
T  42148492 gagactaaaacgaaaagttagtatatttatagggaccaaaaacatattta 42148443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 1691188 - 1691140
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttata-ggaacaaaaacatattt 227  Q
    |||||||||| | |||||||||||||||||| ||| |||||||||||||    
T  1691188 gagactaaaacgaaaagttagtatatttatagggaccaaaaacatattt 1691140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 2489390 - 2489350
Alignment:
Q  185 taaaatgtaaagttagtatatttataggaacaaaaacatat 225  Q
    ||||||| ||| |||||||||||||| ||||||||||||||    
T  2489390 taaaatgaaaaattagtatatttataagaacaaaaacatat 2489350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 5951209 - 5951116
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac---acaaaattctcaaaaagatcttataataattagggatggatgtagtat 144  Q
    ||||||||||||||||||||||||||  | ||||||||||  ||||   | ||||||||||||| | ||   |||||||||||||| || |||||||    
T  5951209 taattaatgtagttgaaaatagcaaaggggtcttataaaaagggacaaaaaaaaattctcaaaagggtc---taataattagggatagaggtagtat 5951116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 37828675 - 37828719
Alignment:
Q  185 taaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||    
T  37828675 taaaatgaaaagttggtatatttataggaaccaaaaacatattta 37828719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 38389879 - 38389939
Alignment:
Q  182 gactaaaatgtaaagttagtatatttat-aggaacaaaaacatatttatctctaaataaaa 241  Q
    |||||||| | ||||||||||||||||| |||| |||||||||||||| | ||||| ||||    
T  38389879 gactaaaacgaaaagttagtatatttataaggatcaaaaacatatttaaccctaaaaaaaa 38389939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 45628793 - 45628899
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagat 115  Q
    ||||||||||||||| |||||||||||       | ||||||||||||||||||||| ||||  |||||||||||  ||||| ||||||||||||| | |    
T  45628793 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaatagaaaatgaatcttataaaaagggacaaaaaattctcaaaagggt 45628891  T
Q  116 cttataat 123  Q
    ||||||||    
T  45628892 cttataat 45628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 32511110 - 32511036
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataata 124  Q
    ||||||||||||||||||||||||||| | ||||||||||  |||| | ||||||||||||| | ||||||||||    
T  32511110 taattaatgtagttgaaaatagcaaataggtcttataaaaagggacaaaaaaattctcaaaagggtcttataata 32511036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 11852132 - 11852205
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  ||||||||||||  |||| | ||||||||||||| |||||||||||    
T  11852132 taattaatgtagttggaaatagcaaagggatcttataaaaagggacaaaaaaattctcaaaaggatcttataat 11852205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 19353316 - 19353208
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | ||||||||||||||||||||| |||  ||||||||||||  ||||  | ||||||||||||| |    
T  19353316 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaatagaaaagggatcttataaaaagggacaaaaaaaattctcaaaagg 19353218  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  19353217 atcttataat 19353208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 24973925 - 24973797
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||| |||  ||||||||||||  ||||| ||||  |||| |||| |    
T  24973925 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagaaaagggatcttataaaaagggacaaaaaaatttcttaaaagg 24973827  T
Q  114 atcttataataattagggatggatgtagtat 144  Q
    ||||||| ||||||||||| ||| |||||||    
T  24973826 atcttat-ataattagggacggaggtagtat 24973797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 8030918 - 8030991
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||||||| |||||||||||||    
T  8030918 atgtataataaataggggcatgtatgtaaaaaaat-aattaatgtagttggaaatagcaaagtgatcttataaaa 8030991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 12360547 - 12360474
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| || ||||||||||  |||| | ||||||||||||| | |||||||||    
T  12360547 taattaatgtagttggaaatagcaaaatggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 12360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 15228095 - 15228169
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | ||||||||||  ||||  | ||||||||||||| |||||||||||    
T  15228095 taattaatgtagttggaaatagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataat 15228169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 16844985 - 16845092
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||  | ||||||||||  ||||| |||| ||||||||| ||    
T  16844985 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaaggggtcttataaaaagggacaaaaaaattctcaaaagga 16845083  T
Q  115 tcttataat 123  Q
    |||||||||    
T  16845084 tcttataat 16845092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 25624857 - 25624750
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||  | ||||||||||  ||||| |||| |||||||||||     
T  25624857 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaaggggtcttataaaaagggacaaaaaaattctcaaaaagg 25624759  T
Q  115 tcttataat 123  Q
    |||||||||    
T  25624758 tcttataat 25624750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 41004034 - 41003960
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | ||||||||||  ||||  | ||||||||||||| |||||||||||    
T  41004034 taattaatgtagttggaaatagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataat 41003960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 19034538 - 19034432
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagat 115  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||||||||  | ||||||||||| |   | ||||||| ||||| |||    
T  19034538 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagcaaaagggtcttataaaagagacaaaaaaattcacaaaaggat 19034440  T
Q  116 cttataat 123  Q
    ||||||||    
T  19034439 cttataat 19034432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 44573829 - 44573902
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | ||||||||||  |||| | ||||||||||||| | |||||||||    
T  44573829 taattaatgtagttggaaatagcaaagaggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 44573902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 11386114 - 11386207
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaagatcttataataattagggatggatgtagtatt 145  Q
    ||||||||||||||| ||||||||||||  ||||||||||  ||||| |||| || |||||| | |||  | ||||||||||||| | ||||||||    
T  11386114 taattaatgtagttggaaatagcaaattagtcttataaaaagggacaaaaaagttatcaaaagggtct--ttataattagggatgaaggtagtatt 11386207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 40768221 - 40768181
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttataggaacaaaaa 220  Q
    |||||||||||| |||||| ||||||||||||| |||||||    
T  40768221 gagactaaaatggaaagttggtatatttatagggacaaaaa 40768181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 37913166 - 37913074
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagatcttataataattagggatggatgtagtattt 146  Q
    ||||||||||||||| |||||| |||| | ||||||||||  ||||| ||||||||||||| |||||||   |||||||||| ||| |||||||||    
T  37913166 taattaatgtagttggaaatagaaaatgggtcttataaaaagggacaaaaaattctcaaaatgatctta---taattagggacggaagtagtattt 37913074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 18751930 - 18751990
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaa 111  Q
    |||||||||||||||||||||||| | || |||||||||| |||||| |||||||||||||    
T  18751930 taattaatgtagttgaaaatagcagagtggtcttataaaaatggacaaaaaattctcaaaa 18751990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 47657610 - 47657693
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataataattaggga 132  Q
    ||||||||||||||| |||||||||| || ||||||||||  ||||  | ||||||||||||||| ||||||||| ||||||||    
T  47657610 taattaatgtagttggaaatagcaaagtggtcttataaaaagggacaaaaaaaattctcaaaaaggtcttataattattaggga 47657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 44547551 - 44547443
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    |||||||||||||||||||||||||||       | |||||||||||||| ||||| ||||  ||||||||||||  ||||  | |||||||||||||||    
T  44547551 atgtataataaatagaggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaagagatcttataaaaagggacaaaaaaaattctcaaaaag 44547453  T
Q  114 atcttataat 123  Q
     |||||||||    
T  44547452 gtcttataat 44547443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 25950955 - 25950848
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaaga 114  Q
    |||||||||||||||||||||||||||       | |||||||||||||| | ||||||||  | ||||||||||  ||||| |||| |||||||||||     
T  25950955 atgtataataaatagaggcatgtatgtaaagaaat-aattaatgtagttggatatagcaaaggggtcttataaaaagggacaaaaaaattctcaaaaagg 25950857  T
Q  115 tcttataat 123  Q
    |||||||||    
T  25950856 tcttataat 25950848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 26339078 - 26339032
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||    
T  26339078 gactaaaacgaaaagttagtatatttataggaccaaaaacatattta 26339032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 8291028 - 8290920
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||| | ||||||||||  ||||  | ||||||||||||  |    
T  8291028 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaatgggtcttataaaaagggacaaaaaaaattctcaaaggg 8290930  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  8290929 atcttataat 8290920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 10071286 - 10071359
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||||||||| | ||||||||||    
T  10071286 atgtataataaataggggcatgtatgtaaataaat-aattaatgtagttgaaaatagcaaataggtcttataaaa 10071359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 41003066 - 41003174
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||| ||||||||||||  ||||  | ||||||||||||| |    
T  41003066 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaatggatcttataaaaagggacaaaaaaaattctcaaaagg 41003164  T
Q  114 atcttataat 123  Q
     |||||||||    
T  41003165 gtcttataat 41003174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 41026008 - 41026116
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||| | ||||||||||  ||||  | ||||||||||||| |    
T  41026008 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaatgggtcttataaaaagggacaaaaaaaattctcaaaagg 41026106  T
Q  114 atcttataat 123  Q
     |||||||||    
T  41026107 gtcttataat 41026116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 32457184 - 32457236
Alignment:
Q  183 actaaaatgtaaagttagtatatttat-aggaacaaaaacatatttatctcta 234  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||| |||||    
T  32457184 actaaaatgaaaagttagtatatttataaggaccaaaaacatatttaactcta 32457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 7449394 - 7449287
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  | ||||||||||  |||| | ||||||||||||| |     
T  7449394 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaattctcaaaatgg 7449296  T
Q  115 tcttataat 123  Q
    |||||||||    
T  7449295 tcttataat 7449287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 23364105 - 23364066
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  23364105 taattaatgtagttggaaatagcaaatggatcttataaaa 23364066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 30895651 - 30895577
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  ||||  | |||| | ||||||||||||||||||    
T  30895651 taattaatgtagttgaaaatagcaaaggggtcttataaaaagggacaaaaaaaaatttcaaaaagatcttataat 30895577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 31803066 - 31803140
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataat 123  Q
    |||||||| || ||| ||||||||||    ||||||||||||||||| ||||  |||||||||||||||||||||    
T  31803066 taattaatataattggaaatagcaaagcagtcttataaaagtggacaaaaaaaattctcaaaaagatcttataat 31803140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 34895948 - 34895909
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  34895948 taattaatgtagttgaaaatagcaaagagatcttataaaa 34895909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 26255223 - 26255113
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaa 111  Q
    |||||||||||||||||  |||||||||||       | |||||||||||||| ||||| |||| || ||||||||||  |||| | |||||||||||||    
T  26255223 aatatgtataataaataagggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaaatggtcttataaaaagggacaaaaaaattctcaaaa 26255125  T
Q  112 agatcttataat 123  Q
     | |||||||||    
T  26255124 gggtcttataat 26255113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 1023689 - 1023738
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttata-ggaacaaaaacatattta 228  Q
    |||||||||| | |||||||||||||||||| ||| ||||||||||||||    
T  1023689 gagactaaaacgaaaagttagtatatttatagggaccaaaaacatattta 1023738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 1694445 - 1694396
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttat-aggaacaaaaacatattta 228  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||||||||||    
T  1694445 gagactaaaatgaaaaattagtatatttataaggaccaaaaacatattta 1694396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 13752413 - 13752462
Alignment:
Q  193 aaagttagtatatttatagg-aacaaaaacatatttatctctaaataaaa 241  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||||||||    
T  13752413 aaagttggtatatttatagggaacaaaaacatatttaaccctaaataaaa 13752462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 34327345 - 34327394
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttatag-gaacaaaaacatattta 228  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||||||    
T  34327345 gagactaaaacgaaaagttagtatatttatagagaccaaaaacatattta 34327394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 9233522 - 9233594
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataa 122  Q
    ||||||||||||||| |||||||||||   ||||||||||  |||| | |||| |||||||| ||||||||||    
T  9233522 taattaatgtagttggaaatagcaaatgagtcttataaaaagggacaaaaaaaatctcaaaaggatcttataa 9233594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 32860268 - 32860216
Alignment:
Q  182 gactaaaatgtaaagttagtatatttata-ggaacaaaaacatatttatctct 233  Q
    |||||||||| |||||| ||||||||||| ||| |||||||||||||| ||||    
T  32860268 gactaaaatgaaaagttggtatatttatagggaccaaaaacatatttaactct 32860216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 38899989 - 38900062
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| |||||||||||||  |||| | ||||||||||||| |||||||||||    
T  38899989 taattaatgtagttggaaatagcaaagtgatcttataaaaagggacaaaaaaattctcaaaaggatcttataat 38900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 55014878 - 55014988
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac----acaaaattctcaaaa 111  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||||||||| |||||||||||| |||||    | |||||||||||||    
T  55014878 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagcaaatggatcttataaaaatggacaaaaaaaaaattctcaaaa 55014976  T
Q  112 agatcttataat 123  Q
     |||||||||||    
T  55014977 ggatcttataat 55014988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 32800848 - 32800787
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaa-caaaaacatatttatctctaaataaaat 242  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||| | |||||||||||    
T  32800848 gactaaaatgaaaagttggtatatttataggaaccaaaaacatatttaaccctaaataaaat 32800787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 34948597 - 34948690
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaat--tctcaaaaagatcttataataattagggatggatgtagtatt 145  Q
    |||||||||||||||||||||| ||| |||||||||||||  ||||| |||||  |||||||| | |||||||||   |||| | ||||||||||||    
T  34948597 taattaatgtagttgaaaatagtaaagtgatcttataaaaagggacaaaaaatattctcaaaatggtcttataat---taggaacggatgtagtatt 34948690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 39184364 - 39184290
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  ||||||||||||  ||||| ||||  ||||||||| | |||||||||    
T  39184364 taattaatgtagttgaaaatagcaaagagatcttataaaaagggacaaaaaaatttctcaaaatggtcttataat 39184290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 42598668 - 42598707
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  42598668 taattaatgtagttgaaaatagcaaatggatcttataaaa 42598707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 51536292 - 51536187
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagat 115  Q
    ||||||||||||||| |||||||||||       | ||||||||||||||||||||  |||  | ||||||||||  ||||| ||||||||||||||| |    
T  51536292 atgtataataaataggggcatgtatgtaaaaaaat-aattaatgtagttgaaaataataaagaggtcttataaaaagggaca-aaaattctcaaaaaggt 51536195  T
Q  116 cttataat 123  Q
    ||||||||    
T  51536194 cttataat 51536187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 13401116 - 13401052
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatatttatctctaaataaaatgatt 246  Q
    |||||||||| ||||||||||||||||||||  | |||| ||||||| | |||||| ||||||||    
T  13401116 gactaaaatgaaaagttagtatatttatagggccgaaaaaatatttaaccctaaattaaatgatt 13401052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 45097111 - 45097205
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataataattagggatggatgtagtattt 146  Q
    ||||||||||||||| ||||||||||  ||||||||||||  ||||  | ||||||||||||| | ||||   ||||||||||| ||||| |||||||    
T  45097111 taattaatgtagttggaaatagcaaagggatcttataaaaagggacaaaaaaaattctcaaaagggtctt---ataattagggacggatggagtattt 45097205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 47228640 - 47228748
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       |||||||||||||||| ||||| |||||   |||||||||| |||||  | ||||||||||||| |    
T  47228640 atgtataataaataggggcatgtatgtaaagaa-ttaattaatgtagttggaaataacaaatgagtcttataaaaatggacaaaaaaaattctcaaaagg 47228738  T
Q  114 atcttataat 123  Q
     |||||||||    
T  47228739 gtcttataat 47228748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 6083375 - 6083301
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaa--attctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  | ||| |||  |||||||||||| |||||||||    
T  6083375 taattaatgtagttgaaaatagcaaaggggtcttataaaaaggaacaaaaaatattctcaaaaaggtcttataat 6083301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 17609933 - 17610040
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||    ||||||||||  |||| | ||||||||||||| ||    
T  17609933 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggagtcttataaaaagggacaaaaaaattctcaaaagga 17610031  T
Q  115 tcttataat 123  Q
    |||||||||    
T  17610032 tcttataat 17610040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 51335884 - 51335810
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  ||||| ||||  ||||||||| | |||||||||    
T  51335884 taattaatgtagttgaaaatagcaaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataat 51335810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 51863734 - 51863687
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||    
T  51863734 gactaaaacgaaaagttagtatatttataggaaccaaaaacatattta 51863687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 16078679 - 16078725
Alignment:
Q  183 actaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  16078679 actaaaatgaaaagttggtatatttataggaaccaaaaacatattta 16078725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 45776390 - 45776439
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttataggaacaaaaacatatttatc 230  Q
    |||| ||||||| |||||||||||||||||||| | |||||||||||||||    
T  45776390 gagattaaaatgaaaagttagtatatttatagg-ataaaaacatatttatc 45776439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 13389855 - 13389928
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||    ||||||||||  |||| | ||||||||||| | |||||||||||    
T  13389855 taattaatgtagttgaaaatagcaaaggagtcttataaaaaaggacaaaaaaattctcaagaggatcttataat 13389928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 14793969 - 14794042
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | |||||||||| ||||| | |||||||| |||| | |||||||||    
T  14793969 taattaatgtagttggaaatagcaaaggggtcttataaaaatggacaaaaaaattcttaaaagggtcttataat 14794042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 23621549 - 23621476
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | ||||||||||  |||| | ||||||||||||| | |||||||||    
T  23621549 taattaatgtagttggaaatagcaaaggggtcttataaaaaaggacaaaaaaattctcaaaagggtcttataat 23621476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 8418291 - 8418331
Alignment:
Q  50 ttaattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    |||||||||||| ||||||||| ||||| ||||||||||||    
T  8418291 ttaattaatgtacttgaaaataccaaatggatcttataaaa 8418331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 24552085 - 24552025
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatatttatctctaaataaaat 242  Q
    |||||||| | |||||| |||||||||||||| ||||| |||||||| | ||| |||||||    
T  24552085 gactaaaacgaaaagttggtatatttataggaccaaaatcatatttaaccctatataaaat 24552025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 25708630 - 25708698
Alignment:
Q  56 aatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaagatcttataat 123  Q
    |||||||||||||||| ||||  | ||||||||||  ||||| |||| ||||||||||| |||||||||    
T  25708630 aatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaattctcaaaaaggtcttataat 25708698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 27553067 - 27553011
Alignment:
Q  182 gactaaaatgtaaagttagtatatttata-ggaacaaaaacatatttatctctaaat 237  Q
    |||||||||| |||||| ||||||||||| ||| |||||||||||||| | ||||||    
T  27553067 gactaaaatgaaaagttggtatatttatagggaccaaaaacatatttaaccctaaat 27553011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 48030404 - 48030310
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataataattagggatggatgtagtattt 146  Q
    ||||||||||||||| ||||||||||  | ||||||||||  ||||  | ||||||||||||| | ||||   ||||||||||||||| | |||||||    
T  48030404 taattaatgtagttggaaatagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtctt---ataattagggatggagggagtattt 48030310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 33487922 - 33487850
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||| ||||  | ||||||||||   |||| ||||||||||||||| |||||||||    
T  33487922 taattaatgtagttgaaaataacaaaggggtcttataaaaagagacaaaaaattctcaaaaaggtcttataat 33487850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 15287230 - 15287156
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||| ||||| |||||||||||| ||| || ||||  || ||||||||||||||||||    
T  15287230 taattaatgtagttggaaataacaaatggatcttataaaaatggtcaaaaaattttttcaaaaagatcttataat 15287156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 11369955 - 11369914
Alignment:
Q  186 aaaatgtaaagttagtatatttataggaacaaaaacatattt 227  Q
    |||||||||||||| |||||||||||| ||||||||||||||    
T  11369955 aaaatgtaaagttaatatatttatagggacaaaaacatattt 11369914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 925879 - 925953
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  ||||||||||||  ||||  | ||||||||||||| | |||||||||    
T  925879 taattaatgtagttggaaatagcaaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataat 925953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 15498720 - 15498646
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||||  |||||||||||  ||||  | ||||||||||||| | |||||||||    
T  15498720 taattaatgtagttggaaatagcaaatgaatcttataaaaagggacaaaaaaaattctcaaaagggtcttataat 15498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 22734521 - 22734568
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||    
T  22734521 gactaaaacgaaaagttagtatatttataggaaccaaaaacatattta 22734568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 10839063 - 10839005
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaac-aaaaacatatttatctctaaataa 239  Q
    |||||||||| |||||| ||||||||||||| || ||||||||||||| ||| ||||||    
T  10839063 gactaaaatgaaaagttggtatatttatagggactaaaaacatatttaactcaaaataa 10839005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 231053 - 231125
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||| |||| || ||||||||||  |||| | ||||||||||||| | |||||||||    
T  231053 taattaatgtagttgaaaataacaaa-tggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 231125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 9299375 - 9299448
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttata-aaagtggacacaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||| ||||||||| |||  ||  | |||||||| |||||| |||||||||    
T  9299375 taattaatgtagttggaaatagcaaatggatcttatagaaataggcaaaaaaattcttaaaaaggtcttataat 9299448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 34674221 - 34674172
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttatag-gaacaaaaacatattta 228  Q
    |||||||||| | ||||||||||||||||||| || ||||||||||||||    
T  34674221 gagactaaaacgaaaagttagtatatttatagagaccaaaaacatattta 34674172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 5528102 - 5527991
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaa 110  Q
    |||||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  | ||||||||||  ||||  | ||||||||||||    
T  5528102 aatatgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggggtcttataaaaaaggacaaaaaaaattctcaaa 5528004  T
Q  111 aagatcttataat 123  Q
    ||| |||||||||    
T  5528003 aaggtcttataat 5527991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 22581647 - 22581756
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac---acaaaattctcaaaaa 112  Q
    |||||||||||||||||||||||||||       | |||||||||||||||||||||||||   |||||||||||  ||||   | |||||||||||||     
T  22581647 atgtataataaatagaggcatgtatgtaaagaaat-aattaatgtagttgaaaatagcaaagaaatcttataaaaagggacaaaaaaaaattctcaaaag 22581745  T
Q  113 gatcttataat 123  Q
    ||| |||||||    
T  22581746 gatattataat 22581756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 32147418 - 32147311
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||| | ||||||||||  |||| | |||||||||||||||     
T  32147418 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaatgggtcttataaaaagggacaaaaaaattctcaaaaagg 32147320  T
Q  115 tcttataat 123  Q
    |||||||||    
T  32147319 tcttataat 32147311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 3160474 - 3160566
Alignment:
Q  52 aattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataataattagggatggatgtagtatt 145  Q
    |||||||||| ||||||||||||||   |||||||||||  ||||| ||||  ||||||||| ||||||   ||||||||||| ||||||||||||    
T  3160474 aattaatgtaattgaaaatagcaaaggaatcttataaaaagggacaaaaaattttctcaaaatgatctt---ataattagggacggatgtagtatt 3160566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 22657893 - 22657785
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||| |||  ||||||||||||  ||||  | ||||||||||||| |    
T  22657893 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagaaaagggatcttataaaaagggacaaaaaaaattctcaaaagg 22657795  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  22657794 atcttataat 22657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 42561261 - 42561369
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||| | ||||||||||  ||||  | ||||||||||||| |    
T  42561261 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaatgggtcttataaaaagggacaaaaaaaattctcaaaagg 42561359  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  42561360 atcttataat 42561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 28838191 - 28838143
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||||| | |||||| ||||||||||||| |||||||||||||||    
T  28838191 gagactaaaacgaaaagttggtatatttatagggacaaaaacatattta 28838143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 35547352 - 35547254
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataataattagggatggatgtagtatttgt 148  Q
    |||||||||||||||||||||| |||  | ||||||||||  ||||  | |||||||||||||| |||||   ||||||||||| ||| ||||||| |||    
T  35547352 taattaatgtagttgaaaatagaaaagaggtcttataaaaagggacaaaaaaaattctcaaaaaaatctt---ataattagggacggaggtagtatgtgt 35547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 20988159 - 20988233
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacac--aaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | ||||||||||  ||||||  ||||||||||||| | |||||||||    
T  20988159 taattaatgtagttggaaatagcaaaaaggtcttataaaaagggacacaaaaaattctcaaaagggtcttataat 20988233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 24363044 - 24363091
Alignment:
Q  182 gactaaaatgtaaagttagtatatttata-ggaacaaaaacatattta 228  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  24363044 gactaaaatgaaaagttagtatatttatatggaccaaaaacatattta 24363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 38161726 - 38161800
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    |||||||||||||||||||||||||||   ||||||||||  ||||  | ||||||| ||||||| |||||||||    
T  38161726 taattaatgtagttgaaaatagcaaatgagtcttataaaaaaggacaaaaaaaattcacaaaaaggtcttataat 38161800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 6899750 - 6899704
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||||| |||||| ||||||||||| |||| ||||||||||||    
T  6899750 gactaaaatgaaaagttggtatatttataagaaccaaaacatattta 6899704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 9268205 - 9268311
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagat 115  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||| |||  | ||||||||||  ||| | ||||||||||||||| |    
T  9268205 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagaaaaggggtcttataaaaagggaaaaaaaattctcaaaaaggt 9268303  T
Q  116 cttataat 123  Q
    | ||||||    
T  9268304 catataat 9268311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 36976721 - 36976676
Alignment:
Q  184 ctaaaatgtaaagttagtatatttatag-gaacaaaaacatattta 228  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||    
T  36976721 ctaaaatgaaaagttagtatatttatagagatcaaaaacatattta 36976676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 5244342 - 5244286
Alignment:
Q  183 actaaaatgtaaagttagtatatttataggaacaaaaacatatttatctctaaataa 239  Q
    ||||||| | ||||||| |||||||||| || |||||||||||||| |||| |||||    
T  5244342 actaaaacgaaaagttaatatatttataagaccaaaaacatatttaactcttaataa 5244286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 20517935 - 20517903
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatct 83  Q
    ||||||||||||||||||||||||||| |||||    
T  20517935 taattaatgtagttgaaaatagcaaatggatct 20517903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 24308088 - 24308148
Alignment:
Q  52 aattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaa 111  Q
    |||||||||||||| ||||||||||| | ||||||||||  |||| | |||||||||||||    
T  24308088 aattaatgtagttggaaatagcaaatgggtcttataaaaagggacaaaaaaattctcaaaa 24308148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 24365235 - 24365175
Alignment:
Q  52 aattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaa 111  Q
    |||||||||||||| ||||||||||| | ||||||||||  |||| | |||||||||||||    
T  24365235 aattaatgtagttggaaatagcaaatgggtcttataaaaagggacaaaaaaattctcaaaa 24365175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 31507567 - 31507658
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagatcttataataattagggatggatgtagta 143  Q
    ||||||||||||||| ||||||||||  | ||||||||| |   | | ||||||||||||||  |||||| ||||||||||| ||| ||||||    
T  31507567 taattaatgtagttggaaatagcaaagaggtcttataaagggacaaaaaaaattctcaaaaatgtcttat-ataattagggacggaggtagta 31507658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 40951989 - 40952064
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataata 124  Q
    ||||||||||||||| ||||||||||  | ||||||||||  ||||  | ||||||||||||| | ||||||||||    
T  40951989 taattaatgtagttggaaatagcaaagaggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataata 40952064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 41641187 - 41641112
Alignment:
Q  50 ttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataat 123  Q
    |||||||||||||||| ||||| ||||  | ||||||||||  ||||| ||||  ||||||||| |||||||||||    
T  41641187 ttaattaatgtagttggaaataacaaaggggtcttataaaaagggacaaaaaaaattctcaaaatgatcttataat 41641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 28673203 - 28673339
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaa 110  Q
    |||||||||||||||||| |||||||||||       | |||||||||||||| |||||| |||  | ||||||||||  ||||| ||||  ||||||||    
T  28673203 aatatgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagtaaagaggtcttataaaaagggacaaaaaaaattctcaaa 28673301  T
Q  111 aagatcttataataattagggatggatgtagtatttgtttt 151  Q
    | ||||||   ||||||||||| ||| ||||||||| ||||    
T  28673302 aggatctt---ataattagggacggaggtagtatttctttt 28673339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 31533492 - 31533387
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagat 115  Q
    ||||||||||||||||| |||||||||       | ||||||| |||||  ||||||||| | ||||||||||||  ||| | |||||||||||||||||    
T  31533492 atgtataataaatagagacatgtatgtaaagaaat-aattaatatagttagaaatagcaattggatcttataaaaagggaaa-aaaattctcaaaaagat 31533395  T
Q  116 cttataat 123  Q
    ||||||||    
T  31533394 cttataat 31533387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 7051632 - 7051740
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  | ||||||||||  ||||  | ||||||||||||| |    
T  7051632 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaaattctcaaaagg 7051730  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  7051731 atcttataat 7051740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 7886974 - 7887082
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaag 113  Q
    ||||||||||||||||| |||||||||       | ||||||| |||||| |||||||||||   ||||||||||  ||||| ||||  |||||||||||    
T  7886974 atgtataataaatagagacatgtatgtaaagaaat-aattaatatagttggaaatagcaaatgagtcttataaaaaaggacaaaaaaaattctcaaaaag 7887072  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  7887073 atcttataat 7887082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 17698978 - 17699070
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaatt-ctcaaaaagatcttataataattagggatggatgtagtatt 145  Q
    ||||||||||||||| ||||||||||  ||||||||||||  ||||| |||||| ||||||| | ||||||||   ||||||| ||| ||||||||    
T  17698978 taattaatgtagttggaaatagcaaagggatcttataaaaaaggacaaaaaatttctcaaaatggtcttataa---ttagggacggaggtagtatt 17699070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 22832518 - 22832627
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaa 112  Q
    |||||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  | |||||||||| ||   | |||||||||||||     
T  22832518 aatatgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggggtcttataaaaatgataaaaaaattctcaaaag 22832616  T
Q  113 gatcttataat 123  Q
    | |||||||||    
T  22832617 ggtcttataat 22832627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 36317601 - 36317674
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaa-aattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||||   ||||||||||  ||||| || |||||||||||| ||||||||||    
T  36317601 taattaatgtagttggaaatagcaaatgagtcttataaaaagggacaaaataattctcaaaaaaatcttataat 36317674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 43557401 - 43557438
Alignment:
Q  53 attaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  43557401 attaatgtagttgaaaatagcaaatggatcttataaaa 43557438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 13809755 - 13809794
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  13809755 taattaatgtagttggaaatagcaaaatgatcttataaaa 13809794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 16435149 - 16435256
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaaga 114  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| ||||| ||||  | ||||||||||  ||||| |||| ||||||||| ||    
T  16435149 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaataacaaaggggtcttataaaaagggacaaaaaaattctcaaaagga 16435247  T
Q  115 tcttataat 123  Q
    |||||||||    
T  16435248 tcttataat 16435256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 20877724 - 20877685
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  20877724 taattaatgtagttgaaaatagcaaaaagatcttataaaa 20877685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 22527567 - 22527606
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaa 90  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  22527567 taattaatgtagttgaaaatagcaaatgaatcttataaaa 22527606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 34661523 - 34661476
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  34661523 gactaaaatgaaaagttggtatatttataggaaccaaaaacatattta 34661476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 43081186 - 43081139
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaa-caaaaacatattta 228  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||    
T  43081186 gactaaaacgaaaagttagtatatttataggaaccaaaaacatattta 43081139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 43140575 - 43140528
Alignment:
Q  182 gactaaaatgtaaagttagtatatttata-ggaacaaaaacatattta 228  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  43140575 gactaaaatgaaaagttagtatatttatagggaccaaaaacatattta 43140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 47067025 - 47066951
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaa--attctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| || ||||||||||  ||||| |||  |||||||||| | |||||||||    
T  47067025 taattaatgtagttggaaatagcaaagtggtcttataaaaagggacaaaaaatattctcaaaagggtcttataat 47066951  T

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Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 49220792 - 49220757
Alignment:
Q  193 aaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||| |||||||||||||||||||||||||||||    
T  49220792 aaagttggtatatttataggaacaaaaacatattta 49220757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 50517468 - 50517542
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | | ||||||||  ||||  | ||||||||||||| |||||||||||    
T  50517468 taattaatgtagttgaaaatagcaaagaggtattataaaaagggacaaaaaaaattctcaaaaggatcttataat 50517542  T

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Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 54107444 - 54107370
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa--ttctcaaaaagatcttataat 123  Q
    |||||||||||||||||||||  |||  | ||||||||||  ||||| ||||  |||||||||||||||||||||    
T  54107444 taattaatgtagttgaaaataataaaggggtcttataaaaagggacaaaaaaaattctcaaaaagatcttataat 54107370  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 31184976 - 31185026
Alignment:
Q  193 aaagttagtatatttataggaa-caaaaacatatttatctctaaataaaat 242  Q
    |||||||||||||||||||||| |||||||||||||| | || ||||||||    
T  31184976 aaagttagtatatttataggaaccaaaaacatatttaacccttaataaaat 31185026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 39952399 - 39952289
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaa 111  Q
    |||||||||||||||||  |||||||||||       | |||||||||||||||||||| ||||  | ||||||||||  |||| | |||||||||||||    
T  39952399 aatatgtataataaatatgggcatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaagggtcttataaaaagggacaaaaaaattctcaaaa 39952301  T
Q  112 agatcttataat 123  Q
     | |||||||||    
T  39952300 gggtcttataat 39952289  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 7886500 - 7886431
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagatcttat 120  Q
    ||||||||||||||| ||||| ||||   ||||||||||| |||||| |||||| |||||| | ||||||    
T  7886500 taattaatgtagttggaaataacaaaggaatcttataaaaatggacaaaaaattatcaaaagggtcttat 7886431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 35572401 - 35572462
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaa 111  Q
    |||||||||||||||||||||||||||   ||||||||||  |||| | |||||||||||||    
T  35572401 taattaatgtagttgaaaatagcaaatgagtcttataaaaagggacaaaaaaattctcaaaa 35572462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 50726730 - 50726803
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  | || | ||||||||||||| | |||||||||    
T  50726730 taattaatgtagttgaaaatagcaaaggggtcttataaaaaggaacaaaaaaattctcaaaagggtcttataat 50726803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 50786118 - 50786045
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  | || | ||||||||||||| | |||||||||    
T  50786118 taattaatgtagttgaaaatagcaaaggggtcttataaaaaggaacaaaaaaattctcaaaagggtcttataat 50786045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 51284009 - 51284082
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||| ||||| ||| ||||||||  |||| | ||||||||||||| | |||||||||    
T  51284009 taattaatgtagttggaaataacaaatggattttataaaaagggacaaaaaaattctcaaaagggtcttataat 51284082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 26806326 - 26806398
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||| ||||  | ||||||||||   |||| |||| |||||||| | |||||||||    
T  26806326 taattaatgtagttgaaaataacaaaggggtcttataaaaaaagacaaaaaaatctcaaaaggctcttataat 26806398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 45388654 - 45388606
Alignment:
Q  180 gagactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||||| | ||||||| ||||||||||| | ||||||||||||||    
T  45388654 gagactaaaacgaaaagttaatatatttatagaaccaaaaacatattta 45388606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 54604533 - 54604585
Alignment:
Q  50 ttaattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa 102  Q
    |||||||||||||||| ||||| ||||  ||||||||||||| ||||| ||||    
T  54604533 ttaattaatgtagttggaaataacaaagggatcttataaaagaggacaaaaaa 54604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 54849451 - 54849380
Alignment:
Q  54 ttaatgtagttgaaaatagcaaattgatcttataaaagtggaca--caaaattctcaaaaagatcttataat 123  Q
    |||||||| ||||||||| ||||| ||||||||||||  |||||   |||||||| |||||| |||||||||    
T  54849451 ttaatgtacttgaaaataacaaatggatcttataaaaagggacaacaaaaattcttaaaaaggtcttataat 54849380  T

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Target: scaffold0674 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 5241 - 5168
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| || ||||||||||  |||| | ||||||||||||| | |||||||||    
T  5241 taattaatgtagttggaaatagcaaaatggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 10129 - 10202
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| || ||||||||||  |||| | ||||||||||||| | |||||||||    
T  10129 taattaatgtagttggaaatagcaaaatggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 18587 - 18514
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| |||||||||| || ||||||||||  |||| | ||||||||||||| | |||||||||    
T  18587 taattaatgtagttggaaatagcaaaatggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 18514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 117971 - 117863
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||||||||| ||||  | ||||||||||  ||||  | ||||||||||||| |    
T  117971 atgtataataaataggggcatgtatgtaaataaat-aattaatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaaattctcaaaagg 117873  T
Q  114 atcttataat 123  Q
    ||||||||||    
T  117872 atcttataat 117863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 43200 - 43246
Alignment:
Q  182 gactaaaatgtaaagttagtatatttataggaacaaaaacatattta 228  Q
    |||||||| | |||||| ||||||||||||| |||||||||||||||    
T  43200 gactaaaacgaaaagttggtatatttatagggacaaaaacatattta 43246  T

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Target: scaffold0339 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 7052 - 7160
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       |||||||||||||||| ||||| |||||   |||||||||| |||||  | ||||||||||||| |    
T  7052 atgtataataaataggggcatgtatgtaaagaa-ttaattaatgtagttggaaataacaaatgagtcttataaaaatggacaaaaaaaattctcaaaagg 7150  T
Q  114 atcttataat 123  Q
     |||||||||    
T  7151 gtcttataat 7160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 9338 - 9467
Alignment:
Q  16 atgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaag 113  Q
    ||||||||||||||| |||||||||||       | |||||||||||||| |||||| |||| | ||||||||||   |||  | ||||||||||||| |    
T  9338 atgtataataaataggggcatgtatgtaaagaaat-aattaatgtagttggaaatagaaaatgggtcttataaaaagagacaaaaaaaattctcaaaagg 9436  T
Q  114 atcttataataattagggatggatgtagtatttg 147  Q
    |||||   ||||||||||| ||| ||||||||||    
T  9437 atctt---ataattagggacggaggtagtatttg 9467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 355247 - 355321
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac--acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||||||||||||||  | ||||||||||  ||||  | ||||||||||||| | |||||||||    
T  355247 taattaatgtagttgaaaatagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataat 355321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2128 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2128
Description:

Target: scaffold2128; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 659 - 601
Alignment:
Q  183 actaaaatgtaaagttagtatatttat-aggaacaaaaacatatttatctctaaataaa 240  Q
    ||||||||| |||||| |||||||||| |||| |||||||||||||| |||| ||||||    
T  659 actaaaatgaaaagttggtatatttataaggaccaaaaacatatttaactcttaataaa 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 12192 - 12082
Alignment:
Q  13 aatatgtataataaatagaggcatgtatgtnnnnnnnttaattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaa 111  Q
    |||||||||||||||||| | |||||||||       | |||||||||||||||||||| ||||  | ||||||||||  |||| | |||||||||||||    
T  12192 aatatgtataataaatagggacatgtatgtaaagaaat-aattaatgtagttgaaaataacaaaggggtcttataaaaagggacaaaaaaattctcaaaa 12094  T
Q  112 agatcttataat 123  Q
     | |||||||||    
T  12093 gggtcttataat 12082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 3528 - 3455
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | ||||||||||  |||| | ||||||||||||| | |||||||||    
T  3528 taattaatgtagttggaaatagcaaaggggtcttataaaaagggacaaaaaaattctcaaaagggtcttataat 3455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 65584 - 65684
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggacacaaaa-ttctcaaaaagatcttataataattagggatggatgtagtatttgtt 149  Q
    ||||||||||||||| ||||| ||||  | ||||||||||  ||||| |||| ||||||||||| ||||||||   ||||||| ||| | |||||||| |    
T  65584 taattaatgtagttggaaataacaaagaggtcttataaaaagggacaaaaaaattctcaaaaaggtcttataa---ttagggacggagggagtatttgat 65680  T
Q  150 ttct 153  Q
    ||||    
T  65681 ttct 65684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 45762 - 45689
Alignment:
Q  51 taattaatgtagttgaaaatagcaaattgatcttataaaagtggac-acaaaattctcaaaaagatcttataat 123  Q
    ||||||||||||||| ||||||||||  | |||||||||| ||||| | |||||||| |||| | |||||||||    
T  45762 taattaatgtagttggaaatagcaaaggggtcttataaaaatggacaaaaaaattcttaaaagggtcttataat 45689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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