View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18864_low_14 (Length: 281)
Name: NF18864_low_14
Description: NF18864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18864_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 50213040 - 50212775
Alignment:
| Q |
1 |
tacataaaccaattcaattggatcgtatcataccggatttttgtcattagatcgaagatctggatcatctttgacctcgaaaggctggtcatcaagaatc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
50213040 |
tacataaaccaattcaattggatcgtatcataccggatttttgtcattagatcgaagatctggatcatctttgacctcgaaaggcaggtcatcaagaatc |
50212941 |
T |
|
| Q |
101 |
tctccctcctctacgtcatcaacaggaagatgattgatcttcaccgaatcaacggtttcagcatcgaattgaatctcttcttcgtcgcgttttttgctga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
50212940 |
tctccctcctctacgtcatcaacaggaagatgattgatcttcaccgaatcaacggtttcagcatcgaattgaatctcttcttcgccgcgttttttgctga |
50212841 |
T |
|
| Q |
201 |
tgtggtggcggtgacggtggcggtgtttgtgacgtttggaggatttgtcgtggtcatcgggagaag |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50212840 |
tgtggtggcggtgacggtggcggtgtttgtgacgtttggaggatttgtcgtggtcatcgggagaag |
50212775 |
T |
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