View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18864_low_16 (Length: 265)
Name: NF18864_low_16
Description: NF18864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18864_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 41300129 - 41300366
Alignment:
| Q |
17 |
ggtataaccatttatattaataggggaactgagactagtgaaattaatgaattaaattagacagattgatacttttaaatcttaactagctagctcagta |
116 |
Q |
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| T |
41300129 |
ggtataaccatttatattaataggggaactgagactagtgaaattaatgaattaaattagacagattgatacttttaaatcttaactagctagctcagta |
41300228 |
T |
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| Q |
117 |
tattggtattggtatattaatatatacatgatgttgcttccattgagaagttacacttagataatatattgcttcaatatgttttttatcatgcctctat |
216 |
Q |
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| T |
41300229 |
tattggtattggtatattaatatatacatgatgttgcttccattgagaagttacacttagataatatattgcttcaatatgttttttatcatgcctctat |
41300328 |
T |
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| Q |
217 |
ttctcactttgaaattaaattaaatataatatcttcat |
254 |
Q |
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| T |
41300329 |
ttctcactttgaaattaaattaaatataatatcttcat |
41300366 |
T |
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