View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18868_low_13 (Length: 267)
Name: NF18868_low_13
Description: NF18868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18868_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 3489709 - 3489970
Alignment:
| Q |
1 |
catatcaccttataacaatttagatattaaataattactctcttt-aggttttcttgtgctgaaattttgaataggccttggtattgcatttttctgtta |
99 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3489709 |
catatcaccttataacaatttagatattaaataattactctcttttaggttttcttgtgctgaaattttgaataggccttggtattgcatttttctgtta |
3489808 |
T |
|
| Q |
100 |
ttaaccattttctgttatcaaatggcagtggaatgtgttgatgtaccagtgatttctggactaactatgtcgacacatgttggtgtattaagaagaagac |
199 |
Q |
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|
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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|
| T |
3489809 |
ttaaccattttctgttatcaaatggcagagaaatgtgttgatgtaccagtgatttctggactaactatgtcgacacgtgttggtgtattaagaagaagac |
3489908 |
T |
|
| Q |
200 |
acacttctggaaaaactagtcctggaaataatgaagaaaaacttgttcctcattttcttcga |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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|
| T |
3489909 |
acacttctggaaaaactagtcctggaaataatgaagaaaaacttgttcctcattatcttcga |
3489970 |
T |
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