View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18868_low_14 (Length: 265)
Name: NF18868_low_14
Description: NF18868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18868_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 3489699 - 3489462
Alignment:
| Q |
13 |
tttattaagcactcttcatataagttgtaaaacaaaattttttattttatgatctctaatttaaaaattggcttaattatcaataaatggaaataatgta |
112 |
Q |
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| T |
3489699 |
tttattaaacactcttcatataagttgtaaaacaaaatttttgattttatgatctctaatttaaaaattggcttaattatcaataaatggaaataatgta |
3489600 |
T |
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| Q |
113 |
cagaatttaatgtataagaaattcaacatcagaattacttggtttctcatctgattcatgtacattaatttaaacaaattcaaatttgaattcaaatgat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
3489599 |
cagaatttaatgtataagaaattcaacatcagaattacttggtttctcatctgattcatgtacattaatttaaacaaattcgaatttgaattcaaatgat |
3489500 |
T |
|
| Q |
213 |
acacgtgaaacaataaatgcaataagaacatgccataa |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
3489499 |
acacgtgaaacaataaatgcaataagaacatgccataa |
3489462 |
T |
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