View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18869_high_9 (Length: 235)
Name: NF18869_high_9
Description: NF18869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18869_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 11596204 - 11596402
Alignment:
| Q |
18 |
agttacaatgtaacggcatctataaataagagtttttatggtgaagaacaagttaataacttgaaatctgaagtctaactccgaaactggaaatggatta |
117 |
Q |
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| T |
11596204 |
agttacaatgtaacggcatctataaataagagtttttatggtgaagaacaagttaataacttgaaatctgaagtctaactccgaaactggaaatggatta |
11596303 |
T |
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| Q |
118 |
gtgctcttagagatcaagtacaccatcatttgtcaacttcctgtatttttgctttaaatcaagttaaatattcaaagtccttttatcatctttatttgt |
216 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11596304 |
gtgctcttagagatcaagtacaccatcatttgtcgacttcctgtatttttgctttaaatcaagttaaatattcaaagtccttttatcatctttatttgt |
11596402 |
T |
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