View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18871_high_2 (Length: 599)

Name: NF18871_high_2
Description: NF18871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18871_high_2
NF18871_high_2
[»] chr4 (40 HSPs)
chr4 (204-579)||(22357397-22357772)
chr4 (327-580)||(14648880-14649128)
chr4 (339-546)||(19929573-19929777)
chr4 (16-121)||(22357768-22357873)
chr4 (337-540)||(17671997-17672196)
chr4 (337-535)||(12578176-12578370)
chr4 (327-540)||(17951201-17951410)
chr4 (327-540)||(17955053-17955262)
chr4 (326-579)||(19092279-19092528)
chr4 (327-519)||(5679190-5679379)
chr4 (328-509)||(11490518-11490695)
chr4 (326-443)||(13692670-13692784)
chr4 (339-503)||(22175904-22176064)
chr4 (344-580)||(13908856-13909089)
chr4 (327-439)||(9737509-9737623)
chr4 (487-538)||(20829645-20829696)
chr4 (337-540)||(13128777-13128978)
chr4 (327-537)||(21323784-21323989)
chr4 (461-540)||(15164880-15164960)
chr4 (344-443)||(19562179-19562275)
chr4 (391-540)||(17337039-17337188)
chr4 (340-441)||(13992879-13992977)
chr4 (405-520)||(19636510-19636625)
chr4 (327-443)||(19882625-19882738)
chr4 (484-540)||(19492616-19492673)
chr4 (344-443)||(19492701-19492797)
chr4 (344-426)||(7582299-7582378)
chr4 (327-378)||(9052659-9052710)
chr4 (483-540)||(19562079-19562137)
chr4 (327-443)||(25121227-25121339)
chr4 (330-425)||(11521210-11521302)
chr4 (478-538)||(19374719-19374778)
chr4 (446-540)||(24639365-24639458)
chr4 (337-426)||(15047123-15047209)
chr4 (337-426)||(15107215-15107301)
chr4 (347-517)||(17216822-17216991)
chr4 (460-517)||(16730328-16730386)
chr4 (484-540)||(13692585-13692642)
chr4 (344-443)||(20315002-20315098)
chr4 (337-389)||(12318428-12318480)
[»] chr7 (61 HSPs)
chr7 (327-579)||(7318258-7318507)
chr7 (327-579)||(3734581-3734829)
chr7 (359-572)||(17153026-17153236)
chr7 (348-579)||(8313259-8313488)
chr7 (327-579)||(9574392-9574639)
chr7 (337-540)||(10586928-10587128)
chr7 (337-580)||(15869590-15869829)
chr7 (344-503)||(4986557-4986713)
chr7 (344-503)||(4990655-4990811)
chr7 (337-540)||(3329561-3329762)
chr7 (360-580)||(4785854-4786075)
chr7 (344-580)||(16365707-16365940)
chr7 (337-540)||(6013588-6013787)
chr7 (344-580)||(5108568-5108799)
chr7 (405-540)||(3190966-3191098)
chr7 (337-540)||(9731531-9731731)
chr7 (344-567)||(18662443-18662661)
chr7 (460-540)||(7492167-7492248)
chr7 (360-540)||(4818854-4819034)
chr7 (465-540)||(16297738-16297813)
chr7 (344-443)||(10584487-10584583)
chr7 (344-517)||(2563820-2563989)
chr7 (484-540)||(19153434-19153490)
chr7 (484-540)||(20752833-20752889)
chr7 (478-540)||(7397274-7397336)
chr7 (456-540)||(9131019-9131105)
chr7 (327-519)||(1587666-1587856)
chr7 (337-416)||(2350775-2350851)
chr7 (353-538)||(10648589-10648770)
chr7 (327-456)||(1584530-1584654)
chr7 (344-473)||(8054457-8054586)
chr7 (341-443)||(13759861-13759960)
chr7 (448-519)||(1584335-1584405)
chr7 (338-418)||(10937598-10937675)
chr7 (344-431)||(8979019-8979103)
chr7 (337-443)||(9245176-9245279)
chr7 (337-443)||(9864327-9864430)
chr7 (344-526)||(11221083-11221261)
chr7 (485-540)||(18368883-18368938)
chr7 (337-426)||(23099970-23100056)
chr7 (327-443)||(5530006-5530119)
chr7 (327-443)||(18495358-18495471)
chr7 (337-444)||(9500439-9500543)
chr7 (326-526)||(31492914-31493107)
chr7 (337-495)||(12181603-12181759)
chr7 (365-443)||(18467474-18467549)
chr7 (344-417)||(8054085-8054155)
chr7 (338-443)||(9916562-9916664)
chr7 (338-443)||(9924474-9924576)
chr7 (479-518)||(14195898-14195937)
chr7 (327-374)||(19153283-19153330)
chr7 (327-374)||(20752682-20752729)
chr7 (480-526)||(140251-140297)
chr7 (488-538)||(8293948-8293997)
chr7 (487-540)||(16058937-16058991)
chr7 (484-580)||(6042589-6042683)
chr7 (344-443)||(18368981-18369077)
chr7 (479-519)||(4579231-4579271)
chr7 (338-374)||(5047453-5047489)
chr7 (467-539)||(17829691-17829762)
chr7 (344-418)||(26134774-26134844)
[»] scaffold0005 (1 HSPs)
scaffold0005 (327-580)||(168164-168412)
[»] chr2 (31 HSPs)
chr2 (326-579)||(32085447-32085695)
chr2 (329-525)||(20174554-20174747)
chr2 (391-546)||(28606076-28606231)
chr2 (360-540)||(25618574-25618750)
chr2 (433-579)||(29027584-29027729)
chr2 (337-540)||(15339233-15339433)
chr2 (344-543)||(17743378-17743573)
chr2 (344-546)||(11382651-11382850)
chr2 (327-526)||(45621799-45621995)
chr2 (339-519)||(23011687-23011864)
chr2 (337-540)||(29719136-29719335)
chr2 (322-540)||(17349338-17349543)
chr2 (391-501)||(25885403-25885513)
chr2 (344-540)||(28925524-28925716)
chr2 (476-540)||(25887808-25887873)
chr2 (337-452)||(25888216-25888324)
chr2 (327-580)||(27908983-27909233)
chr2 (484-567)||(30411805-30411889)
chr2 (337-540)||(31804803-31805004)
chr2 (484-537)||(45553268-45553320)
chr2 (337-443)||(12953295-12953398)
chr2 (484-580)||(26603225-26603320)
chr2 (484-538)||(17890076-17890129)
chr2 (391-540)||(13776384-13776533)
chr2 (483-576)||(23933415-23933506)
chr2 (344-445)||(29883226-29883328)
chr2 (499-540)||(12953248-12953290)
chr2 (327-443)||(45553115-45553228)
chr2 (484-580)||(17675493-17675589)
chr2 (484-540)||(25920391-25920448)
chr2 (391-443)||(24090927-24090979)
[»] chr8 (30 HSPs)
chr8 (327-578)||(25182294-25182542)
chr8 (327-566)||(19786716-19786952)
chr8 (337-540)||(14528144-14528343)
chr8 (391-579)||(13697901-13698086)
chr8 (327-540)||(34497100-34497310)
chr8 (325-496)||(30806440-30806613)
chr8 (337-540)||(29382265-29382465)
chr8 (344-540)||(13314896-13315089)
chr8 (337-517)||(24114211-24114386)
chr8 (337-580)||(24269593-24269831)
chr8 (478-537)||(44010931-44010990)
chr8 (337-538)||(6884953-6885150)
chr8 (327-443)||(5850926-5851039)
chr8 (327-442)||(15238784-15238896)
chr8 (484-540)||(18448446-18448502)
chr8 (480-579)||(7983716-7983813)
chr8 (338-418)||(14075590-14075667)
chr8 (359-426)||(2637615-2637679)
chr8 (339-426)||(24904630-24904714)
chr8 (344-426)||(17101911-17101990)
chr8 (484-567)||(18569193-18569276)
chr8 (338-389)||(14006091-14006142)
chr8 (338-389)||(26008019-26008070)
chr8 (478-540)||(24644970-24645035)
chr8 (338-418)||(31288354-31288430)
chr8 (337-386)||(14628371-14628420)
chr8 (344-389)||(24110707-24110752)
chr8 (337-386)||(30235372-30235421)
chr8 (337-431)||(17976614-17976705)
chr8 (347-413)||(30783772-30783835)
[»] scaffold0008 (1 HSPs)
scaffold0008 (327-580)||(54845-55095)
[»] chr6 (33 HSPs)
chr6 (324-578)||(11176932-11177183)
chr6 (327-573)||(28933532-28933774)
chr6 (344-580)||(12183196-12183428)
chr6 (327-567)||(21907417-21907656)
chr6 (391-580)||(6630556-6630745)
chr6 (451-579)||(8241381-8241505)
chr6 (337-546)||(15466365-15466569)
chr6 (344-540)||(4339737-4339929)
chr6 (395-540)||(9838406-9838550)
chr6 (391-540)||(17827000-17827145)
chr6 (337-526)||(21672352-21672539)
chr6 (327-577)||(22567825-22568069)
chr6 (347-540)||(23645672-23645861)
chr6 (337-526)||(21679768-21679955)
chr6 (359-538)||(22410234-22410409)
chr6 (327-443)||(9726007-9726120)
chr6 (337-517)||(27737616-27737793)
chr6 (337-503)||(21688736-21688899)
chr6 (406-506)||(8039074-8039177)
chr6 (337-459)||(23143717-23143838)
chr6 (327-576)||(22566030-22566276)
chr6 (344-466)||(9516787-9516909)
chr6 (337-417)||(17729147-17729224)
chr6 (327-526)||(25927223-25927417)
chr6 (343-580)||(23844329-23844563)
chr6 (484-538)||(20005824-20005879)
chr6 (391-538)||(24252137-24252282)
chr6 (440-540)||(19244668-19244768)
chr6 (485-540)||(22813625-22813680)
chr6 (344-417)||(27124519-27124589)
chr6 (327-389)||(19244570-19244632)
chr6 (337-416)||(18075416-18075492)
chr6 (484-539)||(11136034-11136090)
[»] scaffold0062 (1 HSPs)
scaffold0062 (364-580)||(43092-43304)
[»] chr3 (35 HSPs)
chr3 (344-579)||(21303220-21303451)
chr3 (327-540)||(12805795-12806004)
chr3 (337-540)||(21325335-21325535)
chr3 (344-540)||(16245634-16245826)
chr3 (337-540)||(3116324-3116522)
chr3 (327-540)||(5508321-5508529)
chr3 (327-572)||(8319025-8319271)
chr3 (329-436)||(10923134-10923238)
chr3 (327-540)||(20429695-20429905)
chr3 (337-556)||(21301913-21302130)
chr3 (337-540)||(21825774-21825972)
chr3 (451-567)||(17155898-17156012)
chr3 (456-540)||(41508477-41508561)
chr3 (337-431)||(10917913-10918004)
chr3 (448-567)||(2723713-2723831)
chr3 (354-540)||(4650243-4650420)
chr3 (360-526)||(2167535-2167698)
chr3 (353-443)||(821515-821602)
chr3 (358-443)||(8557130-8557212)
chr3 (487-540)||(932884-932937)
chr3 (488-540)||(8170013-8170066)
chr3 (327-538)||(10744887-10745093)
chr3 (360-580)||(17438295-17438512)
chr3 (461-540)||(19908421-19908502)
chr3 (327-417)||(12411136-12411223)
chr3 (460-539)||(18736578-18736657)
chr3 (456-519)||(8445932-8445995)
chr3 (487-540)||(12754827-12754881)
chr3 (484-540)||(8765244-8765300)
chr3 (484-540)||(8770146-8770202)
chr3 (484-540)||(16229858-16229915)
chr3 (353-436)||(28728955-28729035)
chr3 (484-539)||(8883028-8883084)
chr3 (344-418)||(12759389-12759460)
chr3 (344-426)||(22349411-22349490)
[»] scaffold0155 (1 HSPs)
scaffold0155 (337-580)||(35859-36099)
[»] scaffold0024 (1 HSPs)
scaffold0024 (337-579)||(39579-39818)
[»] chr1 (45 HSPs)
chr1 (346-540)||(33190681-33190871)
chr1 (337-540)||(9787783-9787983)
chr1 (337-567)||(22664201-22664428)
chr1 (428-579)||(28008188-28008338)
chr1 (438-540)||(18100918-18101019)
chr1 (337-538)||(23037918-23038115)
chr1 (344-538)||(25405536-25405727)
chr1 (326-525)||(24281261-24281457)
chr1 (460-579)||(12012680-12012797)
chr1 (344-540)||(15543871-15544063)
chr1 (344-580)||(13345202-13345433)
chr1 (359-501)||(24214561-24214700)
chr1 (326-466)||(12208585-12208725)
chr1 (448-579)||(15807886-15808016)
chr1 (477-540)||(16360003-16360065)
chr1 (344-580)||(17610120-17610353)
chr1 (391-517)||(147677-147801)
chr1 (486-540)||(21973110-21973164)
chr1 (327-532)||(21847619-21847820)
chr1 (344-540)||(14779567-14779760)
chr1 (327-540)||(15813060-15813268)
chr1 (345-540)||(16179010-16179201)
chr1 (327-420)||(16359856-16359945)
chr1 (479-540)||(17121405-17121465)
chr1 (337-540)||(51473781-51473978)
chr1 (344-449)||(26648966-26649067)
chr1 (461-526)||(16787645-16787712)
chr1 (490-573)||(21334589-21334672)
chr1 (344-417)||(21449091-21449161)
chr1 (471-540)||(31235953-31236024)
chr1 (362-473)||(21666576-21666687)
chr1 (327-416)||(3591681-3591767)
chr1 (483-538)||(32382915-32382969)
chr1 (327-374)||(32383065-32383112)
chr1 (512-546)||(155183-155217)
chr1 (327-443)||(17837502-17837615)
chr1 (487-540)||(21449218-21449272)
chr1 (484-538)||(44795507-44795561)
chr1 (484-540)||(14781770-14781827)
chr1 (484-540)||(16916850-16916907)
chr1 (484-540)||(21987898-21987955)
chr1 (327-418)||(27117744-27117832)
chr1 (391-443)||(9401551-9401603)
chr1 (344-461)||(29242521-29242638)
chr1 (484-528)||(34481108-34481152)
[»] scaffold0622 (1 HSPs)
scaffold0622 (329-579)||(715-960)
[»] scaffold0427 (1 HSPs)
scaffold0427 (391-579)||(2684-2871)
[»] chr5 (30 HSPs)
chr5 (327-540)||(18208155-18208362)
chr5 (318-538)||(18937724-18937940)
chr5 (344-540)||(34487640-34487831)
chr5 (327-515)||(24266883-24267068)
chr5 (327-515)||(24343514-24343699)
chr5 (327-526)||(22755506-22755703)
chr5 (337-519)||(17171479-17171657)
chr5 (327-525)||(19283774-19283969)
chr5 (406-526)||(24662094-24662214)
chr5 (337-443)||(24852173-24852276)
chr5 (459-540)||(36175247-36175327)
chr5 (337-540)||(15690773-15690971)
chr5 (476-578)||(24265342-24265443)
chr5 (476-578)||(24341973-24342074)
chr5 (484-540)||(20563996-20564053)
chr5 (461-517)||(20744597-20744654)
chr5 (337-443)||(15469931-15470034)
chr5 (344-418)||(17185465-17185536)
chr5 (344-426)||(17431885-17431964)
chr5 (337-459)||(25550487-25550608)
chr5 (344-412)||(19004258-19004323)
chr5 (465-538)||(24260635-24260708)
chr5 (481-517)||(15375823-15375859)
chr5 (344-417)||(15375909-15375979)
chr5 (337-426)||(24167602-24167688)
chr5 (336-374)||(20419950-20419988)
chr5 (338-418)||(23380283-23380360)
chr5 (337-416)||(19086207-19086283)
chr5 (359-417)||(17315127-17315182)
chr5 (326-378)||(26121386-26121438)
[»] scaffold0002 (1 HSPs)
scaffold0002 (446-567)||(114589-114710)
[»] scaffold0351 (2 HSPs)
scaffold0351 (401-567)||(151-320)
scaffold0351 (446-567)||(5641-5759)
[»] scaffold0102 (1 HSPs)
scaffold0102 (395-538)||(35587-35730)
[»] scaffold0838 (1 HSPs)
scaffold0838 (344-525)||(2372-2548)
[»] scaffold0832 (1 HSPs)
scaffold0832 (344-525)||(2403-2579)
[»] scaffold0035 (1 HSPs)
scaffold0035 (344-540)||(69915-70107)
[»] scaffold0638 (1 HSPs)
scaffold0638 (344-540)||(726-919)
[»] scaffold0653 (1 HSPs)
scaffold0653 (337-443)||(4484-4587)
[»] scaffold0650 (1 HSPs)
scaffold0650 (327-431)||(6272-6373)
[»] scaffold0957 (1 HSPs)
scaffold0957 (484-572)||(3283-3371)
[»] scaffold0263 (1 HSPs)
scaffold0263 (484-540)||(15785-15841)
[»] scaffold0019 (1 HSPs)
scaffold0019 (484-538)||(181612-181666)
[»] scaffold0016 (1 HSPs)
scaffold0016 (338-418)||(12105-12182)
[»] scaffold0386 (1 HSPs)
scaffold0386 (484-540)||(6009-6066)
[»] scaffold0054 (1 HSPs)
scaffold0054 (484-540)||(72148-72205)
[»] scaffold0606 (1 HSPs)
scaffold0606 (338-374)||(7872-7908)
[»] scaffold0043 (1 HSPs)
scaffold0043 (465-572)||(89726-89833)


Alignment Details
Target: chr4 (Bit Score: 324; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 204 - 579
Target Start/End: Complemental strand, 22357772 - 22357397
Alignment:
Q  204 attgacaaggggagacttttattaattaaagtgcctctaacactccttgtacgacagtcgctcccgaaaatatttgaactttataccttgagattataag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22357772 attgacaaggggagacttttattaattaaagtgcctctaacactccttgtacgacagtcgctcccgaaaatatttgaactttatagcttgagattataag 22357673  T
Q  304 ctaaactcttaccattgacataatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccaca 403  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22357672 ctaaactcttaccattgatataatgatggtcagattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccaca 22357573  T
Q  404 tggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 503  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  22357572 tggattgtcgtttcatttaaacagttcgtgttacttatttaaagttgacgatataaaaaataagagataagagttagagattgcaatttttatttgtttg 22357473  T
Q  504 caacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  22357472 caatatagcaagttacttgtttttgattgcagaaaaggaagcatcgtttaggactttttgaatcccccctatttat 22357397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 327 - 580
Target Start/End: Original strand, 14648880 - 14649128
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| ||||||||||||| |||||| |    
T  14648880 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccaca-ggattgtcgtttcttctaaata 14648975  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    | |||||||| |||||| ||||||||||||||||||| ||||  |||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  14648976 gctcgtgttacttattttaagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttt 14649075  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    |||||| ||||||||||||| || |||||||| |||||||| ||||| ||||||    
T  14649076 tggttgtagaaaaggaaacaacggttaggactctttgaatc-cccctgtttata 14649128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 339 - 546
Target Start/End: Complemental strand, 19929777 - 19929573
Alignment:
Q  339 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatt 438  Q
    |||| |||||||| |||||||||||||||||| ||| || ||| || ||||   ||||||||||||||||||||||||| |||||| ||  ||||||| |    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagta---tcgtatccacatggattgtcgtttcgtctaaatagcccgtgttact 19929681  T
Q  439 tatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||| |||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||||||||    
T  19929680 tattttaagttgacaatataaaataaaagagataagggttaaagatttcaatttttatctgtttgcaacagagcaaattacatgtttttggttgcagaaa 19929581  T
Q  539 aggaaaca 546  Q
    ||||||||    
T  19929580 aggaaaca 19929573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 22357873 - 22357768
Alignment:
Q  16 gaatggacttccactgatcattatattcataacataacatctattgaactcaagatatctgtttcaattccagaagcttcaactgctgatattccactga 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22357873 gaatggacttccaccgatcattatattcataacataacatctattgaactcaagatatctgtttcaattccagaagcttcaactgctgatattccactga 22357774  T
Q  116 gattga 121  Q
    ||||||    
T  22357773 gattga 22357768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 337 - 540
Target Start/End: Original strand, 17671997 - 17672196
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| |||| |   ||||||||||||||||| ||||| ||||||||  ||| ||||    
T  17671997 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatt---gtatccacatggattgttgtttcgtctaaacaactcgcgtta 17672093  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 536  Q
     |||||| ||||| ||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||| |||||||||| ||  ||||||||||||    
T  17672094 cttattttaagttaacgatataaaataaaagagttaaaggttagagattgcaatttttatctgtttgcaacagagcaagttacctg-gtttggttgcaga 17672192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 337 - 535
Target Start/End: Complemental strand, 12578370 - 12578176
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||||||| ||||||| || ||| || ||||   ||||||||||||||||||||||||  || ||||| || | |||     
T  12578370 attaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagta---tcgtatccacatggattgtcgttttgtccaaacaatttgcgttt 12578274  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 535  Q
     |||||| ||||||||||||||||||| |||||| ||| |||||||||| |||||||||| ||||||||||| |||||||||| || ||||||||||||    
T  12578273 cttattttaagttgacgatataaaataaaagagtaaagggttagagattacaatttttatctgtttgcaacagagcaagttacctg-ttttggttgcag 12578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 327 - 540
Target Start/End: Complemental strand, 17951410 - 17951201
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggatt-gtcgtttcatctaaac 425  Q
    ||||||||  |||||  |||||||| ||||| ||||||||||| |||| || |||||||||||   |||||||||  |||||| |||||||| |||||      
T  17951410 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagta---tcgtatccat-tggatttgtcgtttcgtctaact 17951315  T
Q  426 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    || ||| |||| |||||| ||||||||||||||||||| |||||| | | ||||||||||||||||||||| ||||||||||| |||||||||| ||  |    
T  17951314 agctcgcgttacttattttaagttgacgatataaaataaaagagtgacgggttagagattgcaatttttatctgtttgcaacagagcaagttacctg-at 17951216  T
Q  526 ttggttgcagaaaag 540  Q
    |||||||||||||||    
T  17951215 ttggttgcagaaaag 17951201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 327 - 540
Target Start/End: Complemental strand, 17955262 - 17955053
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggatt-gtcgtttcatctaaac 425  Q
    ||||||||  |||||  |||||||| ||||| ||||||||||| |||| || |||||||||||   |||||||||  |||||| |||||||| |||||      
T  17955262 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagta---tcgtatccat-tggatttgtcgtttcgtctaact 17955167  T
Q  426 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    || ||| |||| |||||| ||||||||||||||||||| |||||| | | ||||||||||||||||||||| ||||||||||| |||||||||| ||  |    
T  17955166 agctcgcgttacttattttaagttgacgatataaaataaaagagtgatgggttagagattgcaatttttatctgtttgcaacagagcaagttacctg-at 17955068  T
Q  526 ttggttgcagaaaag 540  Q
    |||||||||||||||    
T  17955067 ttggttgcagaaaag 17955053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 326 - 579
Target Start/End: Original strand, 19092279 - 19092528
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||||||| |||||| |||||||| ||||  |||| ||||||||||| || |||| | ||||   ||| || |||||||||||||||||| || ||||    
T  19092279 atgatggtcagattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagta---tcgcattcacatggattgtcgtttcgtccaaac 19092375  T
Q  426 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    |  ||  |||  |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| ||||| || || |||| || ||    
T  19092376 aactcacgttgcttattttaagttgacgatattaaataaaagagataagagttagagattgcaatttttatctgtttacaacagagtaaattacctg-tt 19092474  T
Q  526 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    |||||| |||||||| ||| | || |||||||| |||| ||| ||| |||||||    
T  19092475 ttggttacagaaaagtaaatagcggttaggactctttgcatcccccatatttat 19092528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 327 - 519
Target Start/End: Original strand, 5679190 - 5679379
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||  |||||||| ||||| |||||||||||||||| || | |||| ||||   ||||||| ||||| | | | ||||| || |||||    
T  5679190 tgatggtccaattagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagta---tcgtatctacatgaacttttgtttcgtccaaaca 5679286  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 519  Q
     |||| |||| |||||| ||||| ||||||||||||| |||||||||| |||||| |||||||||||||| |||||| |||| ||||||||||    
T  5679287 attcgcgttacttattttaagttaacgatataaaataaaagagttaagggttagacattgcaatttttatctgtttgtaacagagcaagttac 5679379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 328 - 509
Target Start/End: Original strand, 11490518 - 11490695
Alignment:
Q  328 gatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacag 427  Q
    |||||||  |||||| |||||||| ||||  |||| ||||||||||| || |||||| ||||   ||||||||||| ||||||| ||||| || |||||     
T  11490518 gatggtcggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagta---tcgtatccacagggattgtagtttcttccaaacaa 11490614  T
Q  428 ttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacat 509  Q
    |||| |||| |||||| |  |||||||||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||    
T  11490615 ttcgcgttacttattttagtttgacgatataaaataaaagagtt-agtgttagagattgcaatttttatctgttttcaacat 11490695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 13692784 - 13692670
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||   |||| ||||||||||||||||||||||  | ||||    
T  13692784 atgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcatatccacatggattgtcgtttcgaccaaac 13692688  T
Q  426 agttcgtgttatttattt 443  Q
    | ||||||||| ||||||    
T  13692687 aattcgtgttacttattt 13692670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 503
Target Start/End: Complemental strand, 22176064 - 22175904
Alignment:
Q  339 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatt 438  Q
    |||| |||||||| ||||| |||| ||||||||||| || |||||| |||| |   ||||||| |  ||||||| |||  || ||||| |||| || |||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtatt---gtatccatagagattgtcattttctccaaacaattcgcgtaatt 22175968  T
Q  439 tatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 503  Q
     ||||  |||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22175967 -attttgagttgatgatataaaataaaagagttaagggttagagattgcaatttttatttgtttg 22175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 580
Target Start/End: Original strand, 13908856 - 13909089
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatt- 442  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| ||||||||||||| || ||||| ||||||||| |||||     
T  13908856 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttattt 13908952  T
Q  443 ---taaagttgacgatataaaatataagagttaagagttagaga---ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcag 535  Q
       |||  |||||||||||||       ||| ||| |||||| |   ||||||||||||| ||||||||||| |||||| |||| ||||||||||||||     
T  13908953 ttgtaattttgacgatataaa-------agtaaag-gttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaa 13909044  T
Q  536 aaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||| || || || |||||| | |||||||| ||| | ||||||    
T  13909045 aaaagtaagcagcggttaggattctttgaatcccccttgtttata 13909089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 9737623 - 9737509
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagt--actatcgtatccacatggattgtcgtttcatctaaa 424  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| || | ||||||||  | ||||||||||||||||||||| ||||| ||||||    
T  9737623 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaa 9737524  T
Q  425 cagttcgtgttattt 439  Q
    || || | |||||||    
T  9737523 caatttgcgttattt 9737509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 487 - 538
Target Start/End: Complemental strand, 20829696 - 20829645
Alignment:
Q  487 caatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  20829696 caatttttatctgtttgcgacatagcaagttacttgtttttggttgcagaaa 20829645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 13128978 - 13128777
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| ||   ||| ||||||| | ||||||||||||| || |||||  ||| ||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagag---tattgtatccatagggattgtcgtttcgtccaaacaactcgcgtta 13128882  T
Q  437 ttta--tttaaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgttttt-ggtt 531  Q
     |||  |||  ||||||| |||||    |||| || |||| |||||||| |||||||||||||||||||| |||| || ||| || | ||||||| ||||    
T  13128881 cttatttttttagttgaccatata----ataaaagataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcggtt 13128786  T
Q  532 gcagaaaag 540  Q
    |||||||||    
T  13128785 gcagaaaag 13128777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 327 - 537
Target Start/End: Complemental strand, 21323989 - 21323784
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||||||||| |||||||| ||||||  || | |||| ||   |||||||||||||| |||||||||||| || |||||    
T  21323989 tgatggtcggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagag---tatcgtatccacatagattgtcgtttcgtccaaaca 21323893  T
Q  427 gttcgtgttatttatttaaagttg-acgatataa-aatataagagttaagag-ttagagattgcaatttttatttgtttgcaacatagcaagttacttgt 523  Q
     |||| |||| ||||||    ||| || ||| || |||| ||||||| || | | ||||||| |||||||||| | ||||||||| |||||||||| ||     
T  21323892 attcgcgttacttattt----ttgaacaataaaataataaaagagttgagggataagagattacaatttttatctatttgcaacagagcaagttacctg- 21323798  T
Q  524 ttttggttgcagaa 537  Q
    ||||||||||||||    
T  21323797 ttttggttgcagaa 21323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 461 - 540
Target Start/End: Original strand, 15164880 - 15164960
Alignment:
Q  461 atataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||    
T  15164880 atataaaagttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctg-ttttggttgcagaaaag 15164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 443
Target Start/End: Complemental strand, 19562275 - 19562179
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| |||||||||||||||||||||| || |||||||||   |||||| |||||| | |||||||||||||| ||||| || || ||| ||||||    
T  19562275 aagtgtaccaaatcatttaccaagtaataaagtgataagtaaag---tatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattt 19562179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 391 - 540
Target Start/End: Complemental strand, 17337188 - 17337039
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagatt-gcaa 489  Q
    ||||||||||| |  ||||||| |||| || ||||| || | |||| ||||||  ||||||||||||||  || |||||| ||| ||| |||||| ||||    
T  17337188 tatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttagttgacgatataa--taaaagagtaaagggtttgagatttgcaa 17337091  T
Q  490 tttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||||||| ||||| ||||| |||||| |||| |||||||||||||| |||||    
T  17337090 tttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaag 17337039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 441
Target Start/End: Complemental strand, 13992977 - 13992879
Alignment:
Q  340 aggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattt 439  Q
    |||||||||||| ||||  |||||||||||||||| || |||||| ||||   ||||||||||||||||| ||||||  || ||||| ||||||||| ||    
T  13992977 aggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagta---tcgtatccacatggattttcgttttgtccaaacaattcgtgttactt 13992881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 520
Target Start/End: Complemental strand, 19636625 - 19636510
Alignment:
Q  405 ggattgtcgtttcatctaaacagttcgtgttatttatttaaag-ttgacgatataaaatataagagttaagagttagagatt-gcaatttttatttgttt 502  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||| ||||||  |||||||| |||||||||| ||||||||||  | |||||||| |||||    
T  19636625 ggattgtcgtttcatccaaacaattcatgttacttattttaagtttgacg--ataaaataaaagagttaagggttagagattcactatttttatatgttt 19636528  T
Q  503 gcaacatagcaagttact 520  Q
    | | || |||||||||||    
T  19636527 gtagcagagcaagttact 19636510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 19882625 - 19882738
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||| |||| ||||||||||| || | |||| ||||   ||||||| ||||||||||||||||| || |||||    
T  19882625 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagta---tcgtatcaacatggattgtcgtttcgtccaaaca 19882721  T
Q  427 gttcgtgttatttattt 443  Q
     |||| |||| ||||||    
T  19882722 attcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 19492673 - 19492616
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  19492673 ttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaag 19492616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 443
Target Start/End: Complemental strand, 19492797 - 19492701
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| ||||||||||||||||  | |||||| ||||   ||||||||||| | |||||||||||||| ||||| |||| |||| ||||||    
T  19492797 aagtgtaccaaatcgtttaccaagtaataaagggataagtagagta---tcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattt 19492701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 7582299 - 7582378
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||||| |||||||||||||||||||||| || |||||| ||   |||| |||||||||||||||| ||||| || |||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagag---tatcatatccacatggattgttgtttcgtccaaaca 7582378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 9052659 - 9052710
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgt 378  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||||||    
T  9052659 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatgt 9052710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 540
Target Start/End: Complemental strand, 19562137 - 19562079
Alignment:
Q  483 attgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||| | ||||||||| |||||| |||| ||||||||||||||||||||    
T  19562137 attgcaatttttatctctttgcaacagagcaagtttacctgtttttggttgcagaaaag 19562079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 25121339 - 25121227
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||| | ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||| ||||| || |||||    
T  25121339 tgatggtcggattaggaaagtgttccaaatcgtttaccaagtaataaagtgt-aagtatagta---tcgtatccacaaggattgtggtttcgtccaaaca 25121244  T
Q  427 gttcgtgttatttattt 443  Q
     |||| |||| ||||||    
T  25121243 attcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 330 - 425
Target Start/End: Complemental strand, 11521302 - 11521210
Alignment:
Q  330 tggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||| ||||  ||||||||| ||||| |||| ||| ||||||| || |||||| ||||   |||||| |||||||||||||||||| |||||||    
T  11521302 tggtcagattaaataagtgtaccaaatcgtttatcaaataataaagtgataagtagagta---tcgtatacacatggattgtcgtttcttctaaac 11521210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 538
Target Start/End: Complemental strand, 19374778 - 19374719
Alignment:
Q  478 tagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    |||||||||||| |||||| |||||||| || |||||||||| || |||||||||||||||    
T  19374778 tagagattgcaaattttatatgtttgcagcaaagcaagttacctg-ttttggttgcagaaa 19374719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 540
Target Start/End: Complemental strand, 24639458 - 24639365
Alignment:
Q  446 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||||  || || ||| ||| ||||||||||   | |||||||||||||||||| |||||| |||| |||||| |||||||||||||    
T  24639458 agttgacgatataa--taaaatagtaaagggttagagatttgtaattttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaag 24639365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 426
Target Start/End: Original strand, 15047123 - 15047209
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||| |||||| | ||||| |||||||||||||||| || |||||| ||    |||||||| ||||||||| ||||||| ||||||||    
T  15047123 attaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagag---gatcgtatctacatggattttcgtttcgtctaaaca 15047209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 15107301 - 15107215
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||| |||||| | ||||| |||||||||||||||| || |||||| ||    |||||||| ||||||||| ||||||| ||||||||    
T  15107301 attaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagag---gatcgtatctacatggattttcgtttcgtctaaaca 15107215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 517
Target Start/End: Original strand, 17216822 - 17216991
Alignment:
Q  347 tgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattta---ttt 443  Q
    ||||| ||||| ||||||||| |||||| || |||||| ||||   || |||||||||||||||||||||| || ||||| |||  |||| |||   ||     
T  17216822 tgtaccaaatcgtttaccaagcaataaagtgataagtagagta---tcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttg 17216918  T
Q  444 aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 517  Q
     ||||||| |||||  |||| ||||   ||| |||||| | ||||||||||||| ||||||||||| ||||||||    
T  17216919 taagttgatgatat--aatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtt 17216991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 16730386 - 16730328
Alignment:
Q  460 aatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 517  Q
    ||||||| ||||||| |||||| | ||||||||||||| ||||||||||| ||||||||    
T  16730386 aatataaaagttaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtt 16730328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 13692642 - 13692585
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 540  Q
    |||||||||||||| ||||| || | |||||||| || ||||||||||||||||||||    
T  13692642 ttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaaaag 13692585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 443
Target Start/End: Original strand, 20315002 - 20315098
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| || ||||||    | |||| |||||||| ||||||||||||| || ||||| || | |||| ||||||    
T  20315002 aagtgtaccaaatcgtttaccaagtaataaattgataagta---gaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 12318428 - 12318480
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 389  Q
    |||||| |||||||| |||||||| ||||||||||||| || |||||| ||||    
T  12318428 attaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagta 12318480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 327 - 579
Target Start/End: Original strand, 7318258 - 7318507
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| | ||| |||||||||||||||| || |||||| ||||   ||||||||||||||||||||||||| ||||||||    
T  7318258 tgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcgtctaaaca 7318354  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    | |||  ||| |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  7318355 gctcgcattacttattttaagttgacgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacttctttt 7318454  T
Q  527 tggttgcagaaaaggaaacatcgtttaggact-ttttgaatcacccctatttat 579  Q
    |||||||||||||||||||| || |||||||| ||||||||| |||||||||||    
T  7318455 tggttgcagaaaaggaaacaacgattaggactcttttgaatc-cccctatttat 7318507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 327 - 579
Target Start/End: Original strand, 3734581 - 3734829
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||| || |||||| ||||   ||||||||||||| ||||| ||||  || |||||    
T  3734581 tgatggtcagattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagta---tcgtatccacatgaattgttgtttggtccaaaca 3734677  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
     |||  |||| |||||| ||||||||||||||||||| |||||||||| |||| ||||||||| |||||| ||||||||||| |||||||||| || |||    
T  3734678 attcacgttacttattttaagttgacgatataaaataaaagagttaagggttaaagattgcaaattttatctgtttgcaacagagcaagttacctg-ttt 3734776  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    |||||||||||||| || ||  | |||||||| |||||||| |||||||||||    
T  3734777 tggttgcagaaaagtaagcaatggttaggactctttgaatctcccctatttat 3734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 359 - 572
Target Start/End: Complemental strand, 17153236 - 17153026
Alignment:
Q  359 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatata 458  Q
    |||||||||||| ||| || |||||| ||||   |||||||||||| |||||||||||| ||||||||| ||| |||| |||||| |||||||||| |||    
T  17153236 tttaccaagtaagaaagtgataagtagagta---tcgtatccacatagattgtcgtttcgtctaaacagctcgcgttacttattttaagttgacgacata 17153140  T
Q  459 aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggact 558  Q
    ||||| ||||| |||| |||||||||||  |||||||| ||||||||||| |||||||||| |||||||||||||||||||| || || || ||| ||||    
T  17153139 aaataaaagagataagggttagagattgttatttttatctgtttgcaacaaagcaagttacctgtttttggttgcagaaaagtaagcagcggttatgact 17153040  T
Q  559 ttttgaatcacccc 572  Q
     |||||||| ||||    
T  17153039 ctttgaatcccccc 17153026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 348 - 579
Target Start/End: Complemental strand, 8313488 - 8313259
Alignment:
Q  348 gtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttc---gtgttatttattta 444  Q
    |||| |||||||||||||||||||||| || |||||| | ||   ||||||||||| ||||||||||||| ||||||||  |    |||||| ||||||     
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagatta---tcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttatttt 8313392  T
Q  445 aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaa 544  Q
    ||||||| | ||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| |  ||||||||||||||||| ||     
T  8313391 aagttgaaggtataaaataaaagagttaagggttagagattgcaatttttatctgttttcaacagagcaagttacct-attttggttgcagaaaagtaag 8313293  T
Q  545 catcgtttaggactttttgaatcacccctatttat 579  Q
    || | ||||||||| || ||||| |||||||||||    
T  8313292 caacatttaggactcttggaatc-cccctatttat 8313259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 327 - 579
Target Start/End: Original strand, 9574392 - 9574639
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| |||||| |||||||||||||| ||||||||| |||||| || |||||| ||||   ||||||| |||  |||||| ||||| |||||||     
T  9574392 tgatggtcagattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagta---tcgtatctacagagattgttgtttcgtctaaacg 9574488  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
      ||| ||||||||||| ||||||||||||||||||| |||||||||| |||||| |||| ||||||||| ||||||||| | ||||||| || ||  ||    
T  9574489 actcgcgttatttattttaagttgacgatataaaataaaagagttaagggttagaaattgtaatttttatctgtttgcaatagagcaagtaacctg-gtt 9574587  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    || ||| ||||||| ||||| |  |||||| | |||||||| |||||||||||    
T  9574588 tgtttgaagaaaagtaaacagcagttaggattctttgaatc-cccctatttat 9574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 10587128 - 10586928
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||| ||| ||||||||||||| ||||||||  || |||||    
T  10587128 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatctacagggattgtcgtttcgtctaaacaactcatgtta 10587032  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 536  Q
     |||||| ||||| || |||||||||| ||||  |||| |||| |||||||||||||||| ||||||||||| |||||| ||| ||||| |||||||| |    
T  10587031 cttattttaagtttacaatataaaataaaagaaataagggttaaagattgcaatttttatctgtttgcaacagagcaagatacatgtttctggttgcaaa 10586932  T
Q  537 aaag 540  Q
    ||||    
T  10586931 aaag 10586928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 337 - 580
Target Start/End: Original strand, 15869590 - 15869829
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||  ||||| |||||||||||||||| || |||||| ||||   |||||||| || ||||| | ||||  |||||| |||  | ||||    
T  15869590 attaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccgcaaggatttttgttttgtctaaatagtctgcgtta 15869686  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 536  Q
     |||||| ||||||||||||||||||| || || |||| ||| |||||||||||||| || ||||||||| | |  ||||||| |||||||||||||| |    
T  15869687 cttattttaagttgacgatataaaataaaatagataagggtttgagattgcaatttt-atctgtttgcaatagaaaaagttacctgtttttggttgcata 15869785  T
Q  537 aaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    |||| ||||| || |||||||| |||||||| ||||| ||||||    
T  15869786 aaagtaaacaacggttaggactctttgaatcccccctgtttata 15869829  T

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Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 344 - 503
Target Start/End: Original strand, 4986557 - 4986713
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| || | |||| ||||   | ||| ||||||||||||||||||| |||||| || ||| |||| ||||||    
T  4986557 aagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagta---tagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattt 4986653  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 503  Q
     |||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  4986654 taagttgacgataaaaaataaaagtgttaagggttagagattgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 344 - 503
Target Start/End: Original strand, 4990655 - 4990811
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| || | |||| ||||   | ||| ||||||||||||||||||| |||||| || ||| |||| ||||||    
T  4990655 aagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagta---tagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattt 4990751  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 503  Q
     |||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  4990752 taagttgacgataaaaaataaaagtgttaagggttagagattgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 3329762 - 3329561
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    ||||||||||||||  |||| ||||||||||||||||| || |||||| ||||   |||||||||||||||||||||||||||| ||||| |  | ||||    
T  3329762 attaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcatccaaacaatctgcgtta 3329666  T
Q  437 tttattta---aagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggtt 531  Q
     ||||||    ||||| |   |||||    | | || |||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3329665 cttatttttgtaagtttaacgtataa----tgaaagataagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggtt 3329570  T
Q  532 gcagaaaag 540  Q
    |||||||||    
T  3329569 gcagaaaag 3329561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 360 - 580
Target Start/End: Original strand, 4785854 - 4786075
Alignment:
Q  360 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa 459  Q
    ||||||||||||||| || |||||| ||||   ||  ||||||| ||||||||||||| || || || |||  |||| ||||||  ||||||||||||||    
T  4785854 ttaccaagtaataaagtgataagtagagta---tcacatccacagggattgtcgtttcgtccaagcacttcacgttacttatttttagttgacgatataa 4785950  T
Q  460 aatataagagttaagagttagagattgcaa----tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttagg 555  Q
    |||| |||||||||| ||||||||||   |    ||||||| | ||||||| | |||||||||| |||||||||||||||||||| || || || |||||    
T  4785951 aataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaagttacctgtttttggttgcagaaaagtaagcagcggttagg 4786050  T
Q  556 actttttgaatcacccctatttata 580  Q
    | | || ||||| | ||||||||||    
T  4786051 attcttcgaatccctcctatttata 4786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 344 - 580
Target Start/End: Original strand, 16365707 - 16365940
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| |   ||||| ||||   ||||||||||||||||||||||||  |  ||||| |||| |||| ||||||    
T  16365707 aagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagta---tcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattt 16365803  T
Q  444 a-aagttgacgatataaaatataagagttaagagttagagattg-caatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagg 541  Q
      |||||||||||||||  || ||||||||||  |||||||||  ||||||| || | |||||| |  |||||||||| |||||||||||||| |||||     
T  16365804 ttaagttgacgatataa--taaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaagttacatgtttttggttgcaaaaaagt 16365901  T
Q  542 aaacatcgtttaggactttttgaatcacccctatttata 580  Q
    || || || |||||| | || ||||| ||||||||||||    
T  16365902 aagcagcggttaggattcttcgaatctcccctatttata 16365940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 337 - 540
Target Start/End: Original strand, 6013588 - 6013787
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||| |||||| | || || |||||| ||||   ||||||||||| ||||| || ||| ||| ||||| || |  |||    
T  6013588 attaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagta---tcgtatccacaaggattctcattttatccaaacaattggcttta 6013684  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaa-tttttatttgtttgcaacatagcaagttacttgtttttggttgcag 535  Q
     |||||| |  |||| ||||||||||| |||||| ||| ||||| |||||||| ||||||||||||||||||| ||||| |||| ||  |||||||||||    
T  6013685 cttattttagtttgatgatataaaataaaagagtaaagggttagcgattgcaattttttatttgtttgcaacaaagcaatttacatg--tttggttgcag 6013782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 344 - 580
Target Start/End: Original strand, 5108568 - 5108799
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| |||| ||||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||||||||| || ||||| ||||     ||  |||    
T  5108568 aagtgtaccaaattatttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaattcgaacacttatttt 5108663  T
Q  444 aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaagg 541  Q
     |||||||||||||||  || ||||||  |  |||||||| || |||||||||| ||||||||| | |||||||| ||||| |||||||||||||||||     
T  5108664 taagttgacgatataa--taaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttggttgcagaaaagt 5108761  T
Q  542 aaacatcgtttaggactttttgaatcacccctatttata 580  Q
    || || || |||||| | |||||||| ||||||||||||    
T  5108762 aagcagcggttaggattctttgaatc-cccctatttata 5108799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 540
Target Start/End: Complemental strand, 3191098 - 3190966
Alignment:
Q  405 ggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgc 504  Q
    ||||||||||||| || ||||| |||||||||||||||| ||||||| ||||||||| | ||| |||  | ||||||||||| ||||||||| |||||||    
T  3191098 ggattgtcgtttcgtccaaacaattcgtgttatttattttaagttgaggatataaaacaaaagggttttgggttagagattgtaatttttatatgtttgc 3190999  T
Q  505 aacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||| | |||||||  | | ||||||||||||||||    
T  3190998 aacaga-caagtta--tctatttggttgcagaaaag 3190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 9731731 - 9731531
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| ||||  ||||| |||| || |||||| ||||   ||||| ||||| ||||||||||||| || ||||| |||| ||||    
T  9731731 attaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagta---tcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgtta 9731635  T
Q  437 tttatttaaag-ttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 534  Q
     ||||||  || |||| |  |||||||| |||||||| || ||||||| ||||||||||||| | | || ||||||||||||||| ||||||||||||||    
T  9731634 cttatttttagtttgatg--ataaaataaaagagttacgaattagagatttgcaatttttatctatgtgtaacatagcaagttacctgtttttggttgca 9731537  T
Q  535 gaaaag 540  Q
     |||||    
T  9731536 taaaag 9731531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 344 - 567
Target Start/End: Original strand, 18662443 - 18662661
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||  ||||| ||||||||| | |||| || |||||| ||||   ||||||||||| ||||||||||||| || ||||| |||  |||| ||||||    
T  18662443 aagtgtatcaaatcgtttaccaagcactaaagtgataagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T
Q  444 aaagttgacgatata-aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagga 542  Q
       ||  || | ||| ||||| |||| || ||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||| | |    
T  18662540 g--gtgaacaaaatataaataaaagatttgagagttagatattgcaatttttatttgtttgcaacagagcaagttacctg-ttttggttgcagaaatgta 18662636  T
Q  543 aacatcgtttaggactttttgaatc 567  Q
    | || || |||||||| || |||||    
T  18662637 agcagcggttaggactcttcgaatc 18662661  T

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Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 460 - 540
Target Start/End: Complemental strand, 7492248 - 7492167
Alignment:
Q  460 aatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||| |||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||    
T  7492248 aataaaagagttaagggttagagatttgcaatttttaactgtttgcaacagagcaagttacctgtttttggttgcagaaaag 7492167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 540
Target Start/End: Original strand, 4818854 - 4819034
Alignment:
Q  360 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa 459  Q
    ||||||||||||||| || |||||| ||||   ||  ||||||| ||||||||||||| || || || |||  |||| ||||||  ||||||||||||||    
T  4818854 ttaccaagtaataaagtgataagtagagta---tcacatccacagggattgtcgtttcgtccaagcacttcacgttacttatttttagttgacgatataa 4818950  T
Q  460 aatataagagttaagagttagagattgcaatttttatttgt---ttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||| |||||||||| ||||||||||   | |||| ||| |   |||||| | |||||||||| | ||||||||||||||||||    
T  4818951 aataaaagagttaagggttagagatttttaattttttttatctattgcaatagagcaagttacctatttttggttgcagaaaag 4819034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 465 - 540
Target Start/End: Complemental strand, 16297813 - 16297738
Alignment:
Q  465 aagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| || ||||||| | ||||||||||||||||||    
T  16297813 aagagttaagggttagaaattgcaatttttatatgtttgcaacagagtaagttacctatttttggttgcagaaaag 16297738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 443
Target Start/End: Complemental strand, 10584583 - 10584487
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||| ||||||||||| || |||| ||||||   |||||||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  10584583 aagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagta---tcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 517
Target Start/End: Original strand, 2563820 - 2563989
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||||||||| || ||||| || |||||| ||||||    
T  2563820 aagtgtaccaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttattt 2563915  T
Q  444 ---aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 517  Q
        ||||| ||||||||    |||| || |||| |||||||| ||| ||||||||| ||||||||||| ||||||||    
T  2563916 ctgtaagttcacgatata----ataaaagataagggttagagagttgaaatttttatctgtttgcaacagagcaagtt 2563989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 19153434 - 19153490
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  19153434 ttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaag 19153490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 20752833 - 20752889
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  20752833 ttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaag 20752889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 540
Target Start/End: Original strand, 7397274 - 7397336
Alignment:
Q  478 tagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||||||||| ||||||||||| | |||||||  ||||||||||||||||||||    
T  7397274 tagagattgcaatttttatctgtttgcaacaaaacaagttatctgtttttggttgcagaaaag 7397336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 540
Target Start/End: Original strand, 9131019 - 9131105
Alignment:
Q  456 ataaaatataagagttaagag-ttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||| |||||||||| | ||||||||| ||||||||||||||||||||| | |||||||||  |||||||||||||| |||||    
T  9131019 ataaaataaaagagttaaggggttagagatttgcaatttttatttgtttgcaatagagcaagttaactgtttttggttgcaaaaaag 9131105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 519
Target Start/End: Original strand, 1587666 - 1587856
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| || ||||| ||||| ||||| ||||| |||| || ||| || ||||   || |||| |||| ||| || |||||||| |||||    
T  1587666 tgatggtcggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagta---tcatatctacatagatagttgtttcatccaaaca 1587762  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagag--attgcaatttttatttgtttgcaacatagcaagttac 519  Q
     |||| ||||  |||||    |||||||||||||||| |||| ||| | |||||||  |||||||||||||||||||||||||| ||||||||||    
T  1587763 attcgcgttacctattttgttttgacgatataaaataaaagatttagg-gttagagagattgcaatttttatttgtttgcaacagagcaagttac 1587856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 2350851 - 2350775
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 416  Q
    |||||| |||||||| |||||||||||||||||||||| || ||||||    | ||||||||||||||||||||||||||    
T  2350851 attaggcaagtgtaccaaatcatttaccaagtaataaactgctaagta---gattatcgtatccacatggattgtcgttt 2350775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 538
Target Start/End: Original strand, 10648589 - 10648770
Alignment:
Q  353 aaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgac 452  Q
    ||||| |||||||||||||||| || ||| || ||||   || ||| | || |||||||||||||||||||||| ||||||||| |||||| | |   |     
T  10648589 aaatcgtttaccaagtaataaagtgataaatagagta---tcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttta-gaacaa 10648684  T
Q  453 gata-taaaatataagagttaagagtta-gagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
     ||| || |||| ||||||| || |||| ||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  10648685 aataatacaata-aagagttgagggttaagagattgcaatttttatctgtttgcaacaaagcaagttacatg-ttttggttgcagaaa 10648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 1584530 - 1584654
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| || ||||||||||||||||||| || ||||| |     ||||||||||||| ||||||| ||||| ||||||||    
T  1584530 tgatggtcggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagtgag----tatcgtatccacagggattgttgtttcgtctaaaca 1584624  T
Q  427 gttcgtgttatttatttaaagttgacgata 456  Q
      ||| |||| |||||| ||||||||||||    
T  1584625 aatcgcgttacttattttaagttgacgata 1584654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 473
Target Start/End: Complemental strand, 8054586 - 8054457
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||| ||||||| || |||||| ||||   |||||| |||| | ||||||||||| || ||||| ||| ||||| ||||||    
T  8054586 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T
Q  444 a---aagttgacgatataaaatataagagttaa 473  Q
        ||||||||||||||||| |||||||||||    
T  8054489 ttgtaagttgacgatataaaagataagagttaa 8054457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 443
Target Start/End: Complemental strand, 13759960 - 13759861
Alignment:
Q  341 ggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattta 440  Q
    ||||||||||| ||||| |||||||| ||||||| || |||||| ||||   || |||||||| ||||||||||||| || |||||||||| |||| |||    
T  13759960 ggtaagtgtaccaaatcgtttaccaattaataaagtgataagtagagta---tcatatccacaaggattgtcgtttcgtccaaacagttcgcgttactta 13759864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 519
Target Start/End: Original strand, 1584335 - 1584405
Alignment:
Q  448 ttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 519  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||| | ||||||| | ||||||||||    
T  1584335 ttgacgatataaaataaaagagttaaaggttagagattgcaatttttatctttttgcaa-aaagcaagttac 1584405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 10937598 - 10937675
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||| |||||||  ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||||||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagta---tcgtatccacatggattgtcgtttca 10937675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 431
Target Start/End: Complemental strand, 8979103 - 8979019
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcg 431  Q
    |||||||| |||||||||||||||||||||| || |||||| ||   |||| |||||||||||||||| ||||| || ||||| ||||    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagag---tatcatatccacatggattgttgtttcgtccaaacaattcg 8979019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Original strand, 9245176 - 9245279
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| || |||||  |||| |||||||||||| |||||| |||| | ||||   |||||||||||||||||||| |||| | |||||| |||||||||    
T  9245176 attaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagta---tcgtatccacatggattgtcatttcgtttaaacaattcgtgtta 9245272  T
Q  437 tttattt 443  Q
     ||||||    
T  9245273 cttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 9864430 - 9864327
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||||| ||||   || |||||||| ||||||||||||| |||||||| || | ||||    
T  9864430 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagta---tcatatccacaaggattgtcgtttcgtctaaacaatttgcgtta 9864334  T
Q  437 tttattt 443  Q
     ||||||    
T  9864333 cttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 526
Target Start/End: Complemental strand, 11221261 - 11221083
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| ||||| |||||||||| || |||||| |||| |   ||||||||| ||||||||||||| | |||||| || | |||| ||||||    
T  11221261 aagtgtaccaaatcgtttactaagtaataaattgataagtagagtatt---gtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattt 11221165  T
Q  444 aaagttgacgatataaaatata-agagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
        || |||||| || | | | |||||| || |||| | | ||||||||||||||||||||||||| || ||||||||||||||    
T  11221164 t---ttaacgataaaataaaaagagagttgagggttaaaaaattgcaatttttatttgtttgcaacagagaaagttacttgtttt 11221083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 540
Target Start/End: Complemental strand, 18368938 - 18368883
Alignment:
Q  485 tgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||||| ||||||||||| |||||||||| || ||||||||| |||||||    
T  18368938 tgcaatttttatctgtttgcaacaaagcaagttacctgcttttggttgtagaaaag 18368883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 23100056 - 23099970
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||| |||||||| ||||| |||||||| ||||||| || |||||| ||||   |||||||||||| |||||||||||| || |||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtatccacatagattgtcgtttcgtccaaaca 23099970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 5530006 - 5530119
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| | |||||| ||||  ||||||||||||||||||| |||||||||    ||||||||||||  |||| ||||||| || |||||    
T  5530006 tgatggtcggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaag---catcgtatccacagagattttcgtttcgtccaaaca 5530102  T
Q  427 gttcgtgttatttattt 443  Q
     || |||||| ||||||    
T  5530103 atttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 18495358 - 18495471
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||  |||||||||||||  ||||| |||||||||| || ||||||||||| |   |||||||   ||||||||||||| ||||||||    
T  18495358 tgatggtcggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaat---gtatccatggggattgtcgtttcgtctaaaca 18495454  T
Q  427 gttcgtgttatttattt 443  Q
     || |||||| ||||||    
T  18495455 atttgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 9500439 - 9500543
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||||||||||||||  || | | || ||   ||||||||||||| ||||||| ||||| |||||||| ||||  |||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagag---tatcgtatccacaaggattgttgtttcgtctaaacaattcgcatta 9500535  T
Q  437 tttattta 444  Q
     |||||||    
T  9500536 cttattta 9500543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 326 - 526
Target Start/End: Original strand, 31492914 - 31493107
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||||||  || ||| |||||||  ||||| ||||||| |||||||| || |||||| ||||   ||||||||||||||||||||||||  || ||||    
T  31492914 atgatggtcggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagta---tcgtatccacatggattgtcgttttgtccaaac 31493010  T
Q  426 agttcgtgttatttatttaaagttgacgatata--aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgt 523  Q
    | || || ||| ||||||    |  || ||| |  ||||| ||||||| || |||||||  |||||||||||| ||||||||||| ||  ||||||||||    
T  31493011 aatttgttttacttattt----tgaacaataaaataaataaaagagttgagggttagag--tgcaatttttatctgtttgcaacagagtcagttacttgt 31493104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 495
Target Start/End: Original strand, 12181603 - 12181759
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcat-ctaaacagttcgtgtt 435  Q
    |||||| |||| ||| ||||| ||||  |||||||||| ||  ||||| |||||   |||||||||||| ||||||||||| | | ||||| |||| |||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtac---cgtatccacatgaattgtcgtttcgtcccaaacaattcgagtt 12181699  T
Q  436 atttatttaaagttgacgatataaaatataagagtt-aagagttagaga-ttgcaattttta 495  Q
    | |||||| |||||||||  ||||| || ||||||| ||| |||||||| ||||||||||||    
T  12181700 acttattttaagttgacg--ataaattaaaagagttgaagggttagagatttgcaattttta 12181759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 443
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  365 aagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||||| || ||||||||||| |   ||||||||||||||||||||||| |||||||| ||  ||||| ||||||    
T  18467474 aagtaataaagtgataagtaaagtatt---gtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 417
Target Start/End: Complemental strand, 8054155 - 8054085
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    |||||||| ||||| |||||||||||||||| || ||| || ||||   ||||||||||||| |||||||||||    
T  8054155 aagtgtaccaaatcgtttaccaagtaataaagtgataattagagta---tcgtatccacatgaattgtcgtttc 8054085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 9916562 - 9916664
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttat 437  Q
    ||||| |||| ||| ||||||||||||| |||||||| |  |||||| ||||   ||||||||||||||||||| |||||| | ||||| |  ||||||     
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagta---tcgtatccacatggattgtagtttcaaccaaacaatatgtgttac 9916658  T
Q  438 ttattt 443  Q
    ||||||    
T  9916659 ttattt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 9924474 - 9924576
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttat 437  Q
    ||||| |||| ||| ||||||||||||| |||||||| |  |||||| ||||   ||||||||||||||||||| |||||| | ||||| |  ||||||     
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagta---tcgtatccacatggattgtagtttcaaccaaacaatatgtgttac 9924570  T
Q  438 ttattt 443  Q
    ||||||    
T  9924571 ttattt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 518
Target Start/End: Complemental strand, 14195937 - 14195898
Alignment:
Q  479 agagattgcaatttttatttgtttgcaacatagcaagtta 518  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  14195937 agagattgcaatttttatctgtttgcaacagagcaagtta 14195898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 19153283 - 19153330
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaa 374  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  19153283 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaa 19153330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 20752682 - 20752729
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaa 374  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  20752682 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaa 20752729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 526
Target Start/End: Original strand, 140251 - 140297
Alignment:
Q  480 gagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    |||||||| |||||||| ||||||||||| |||||||||| ||||||    
T  140251 gagattgccatttttatctgtttgcaacagagcaagttacctgtttt 140297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 538
Target Start/End: Complemental strand, 8293997 - 8293948
Alignment:
Q  488 aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  8293997 aatttttatctgtttgcaacagagcaagttacctg-ttttggttgcagaaa 8293948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 16058991 - 16058937
Alignment:
Q  487 caatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 540  Q
    |||||||||| ||||||||||| ||||| || |||||||||||||||||| ||||    
T  16058991 caatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaag 16058937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 580
Target Start/End: Original strand, 6042589 - 6042683
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||||||||||| ||||||||||| || |  |||| | |||||||||||||||||  || || || |||||| | |||||||  ||||||||||||    
T  6042589 ttgcaatttttatatgtttgcaacagagaagtttacctttttttggttgcagaaaaataagcagcggttaggattctttgaat--cccctatttata 6042683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 443
Target Start/End: Complemental strand, 18369077 - 18368981
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||||||||  |||||||||||||||| || |||||| ||   ||| ||||||| | ||||||||||||| || ||||| |||  |||| ||||||    
T  18369077 aagtgtactaaatagtttaccaagtaataaagtgataagtagag---tattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 4579231 - 4579271
Alignment:
Q  479 agagattgcaatttttatttgtttgcaacatagcaagttac 519  Q
    ||||||| |||||||||| |||||| |||||||||||||||    
T  4579231 agagattacaatttttatctgtttgtaacatagcaagttac 4579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 5047489 - 5047453
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaa 374  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaa 5047453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 539
Target Start/End: Original strand, 17829691 - 17829762
Alignment:
Q  467 gagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaa 539  Q
    |||||||| ||||| ||||| ||||||||| ||||||||||| | |||||||  || ||||||||| ||||||    
T  17829691 gagttaagggttagcgattgtaatttttatctgtttgcaacagaacaagttaactg-ttttggttggagaaaa 17829762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 418
Target Start/End: Complemental strand, 26134844 - 26134774
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    |||||||| ||||| ||||||||||||||||||| |||||| ||   |||||||||||||| || |||| |||||    
T  26134844 aagtgtaccaaatcgtttaccaagtaataaaatg-taagtagag---tatcgtatccacatagactgtcatttca 26134774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 128; Significance: 7e-66; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 327 - 580
Target Start/End: Complemental strand, 168412 - 168164
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| ||||||||||||| |||||| |    
T  168412 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccaca-ggattgtcgtttcttctaaata 168317  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    | |||||||| |||||| ||||||||||||||||||| ||||  |||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  168316 gctcgtgttacttattttaagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttt 168217  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    |||||| ||||||||||||| || |||||||| |||||||| ||||| ||||||    
T  168216 tggttgtagaaaaggaaacaacggttaggactctttgaatc-cccctgtttata 168164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 7e-66; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 326 - 579
Target Start/End: Original strand, 32085447 - 32085695
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||||||  ||||||||||||||| ||||  |||||||||||||||| || |||||| ||||   || |||||||||||||||||||||| |||||||    
T  32085447 atgatggtcggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgtttcgtctaaac 32085543  T
Q  426 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    || |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||  |    
T  32085544 agctcgtgttacttattttaagttgacgatataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacagagcaagttacctg-gt 32085642  T
Q  526 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||||||||||||||| || || || |||||||| ||| |||| |||||||||||    
T  32085643 ttggttgcagaaaagtaagcagcggttaggactctttaaatc-cccctatttat 32085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 329 - 525
Target Start/End: Complemental strand, 20174747 - 20174554
Alignment:
Q  329 atggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt 428  Q
    ||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   || | |||||||||||||||||||| || ||||| |    
T  20174747 atggtcagattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcatttccacatggattgtcgtttcgtccaaacaat 20174651  T
Q  429 tcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    || ||||| |||||| ||||||| ||||||||||| || ||||||| ||||||||||| ||||||||| ||||||||||| ||||| |||| |||||    
T  20174650 tcatgttacttattttaagttgatgatataaaataaaatagttaagggttagagattggaatttttatctgtttgcaacagagcaaattacctgttt 20174554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 391 - 546
Target Start/End: Complemental strand, 28606231 - 28606076
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 490  Q
    ||||||||||||  ||||||||||||| ||||||||| | | |||| |||||| |||||||||||||| |||| |||||  ||| |||||||||||||||    
T  28606231 tatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattttaagttgacgatatataataaaagagacaagggttagagattgcaat 28606132  T
Q  491 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaaca 546  Q
    |||||||||||| | ||||| |||||||| ||||||| |||||| |||||||||||    
T  28606131 ttttatttgtttacgacataacaagttacctgttttttgttgcataaaaggaaaca 28606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 540
Target Start/End: Original strand, 25618574 - 25618750
Alignment:
Q  360 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa 459  Q
    ||||||||||||||| || |||||| ||||   || |||||||||||||||||||||| |||||||| |||| || | ||||||  ||||||||||||      
T  25618574 ttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttatttttagttgacgatat-- 25618668  T
Q  460 aatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||| |||||| || ||||||||| ||||||||||||| ||||||||||| || ||| |||| || |||||||||||||||||    
T  25618669 aataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctg-ttttggttgcagaaaag 25618750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 433 - 579
Target Start/End: Original strand, 29027584 - 29027729
Alignment:
Q  433 gttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttg 532  Q
    |||| |||||| |||||| |||||| ||||| ||||| |||| ||||||||||||||||||||| ||||||||| | ||||||| || ||  ||||||||    
T  29027584 gttacttattttaagttgccgatattaaataaaagagataagggttagagattgcaatttttatctgtttgcaagagagcaagtgacctg-atttggttg 29027682  T
Q  533 cagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    |||||||| ||||| || |||| ||| | ||||||  ||||||||||    
T  29027683 cagaaaagaaaacaacggttagaactatgtgaatccaccctatttat 29027729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 540
Target Start/End: Original strand, 15339233 - 15339433
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||||||||||||||| ||  ||||| ||   |||| |||||||||||||||||||||| || ||||| || | ||||    
T  15339233 attaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagag---tatcatatccacatggattgtcgtttcgtccaaacaattagcgtta 15339329  T
Q  437 ttta--tttaaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttg 532  Q
     |||  ||  ||||| | ||||||    |||| || |||| |||||||| ||||||||||||||||||||||||| |||||| |||  ||||||| ||||    
T  15339330 cttactttgtaagttaaggatata----ataaaagataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttg 15339425  T
Q  533 cagaaaag 540  Q
    ||||||||    
T  15339426 cagaaaag 15339433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 344 - 543
Target Start/End: Complemental strand, 17743573 - 17743378
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||| ||||||| || ||||| ||||||||| ||||||    
T  17743573 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattt 17743477  T
Q  444 ----aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaa 537  Q
        ||  || ||||||||||       ||||||| |||||||| ||||||||||||| | ||||||||  |||||| |||| |||||||||||| ||||    
T  17743476 ttgcaagtttaacgatataaa-------agttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggttgtagaa 17743384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 344 - 546
Target Start/End: Complemental strand, 11382850 - 11382651
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||  ||||| |||||||  ||||||| || |||||| ||||   || |||||||||| |||||  ||||||| ||| | |||| |||| ||||||    
T  11382850 aagtgtatcaaatcgtttaccagataataaagtgataagtagagta---tcatatccacatgaattgtattttcatccaaataattcgcgttacttattt 11382754  T
Q  444 aaagtt-gacgatataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagg 541  Q
      |||| |||||||  | ||| ||||||||| ||||||||||| |||| |||||| ||||||||||| |||||||||||||||||| |||| |||||||     
T  11382753 ttagtttgacgata--agataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagagcaagttacttgttttttgttgtagaaaagt 11382656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 327 - 526
Target Start/End: Complemental strand, 45621995 - 45621799
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||| | |||||||| ||||| |||||||||||||||| ||  ||||| ||||   ||||||| ||| ||||||||||||| || |||||    
T  45621995 tgatggtcggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagta---tcgtatctacaaggattgtcgtttcgtccaaaca 45621899  T
Q  427 gttcgtgttatttatttaaagttg-acgatataaaatataaga-gttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgt 523  Q
     ||||||||| ||||||    ||| || | |||||||| |||| | |||| ||||||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  45621898 attcgtgttacttattt---tttgaacaaaataaaataaaagatgataagggttagagtttgtaatttttatctgtttgcaacatagcaagtttacttgt 45621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 519
Target Start/End: Complemental strand, 23011864 - 23011687
Alignment:
Q  339 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatt 438  Q
    |||| |||||||| ||||  |||||||||||||||| ||| ||||| | || |   ||||||||| ||||||||||||  |||||||| || | ||||||    
T  23011864 taggcaagtgtaccaaattttttaccaagtaataaagtgt-aagtagattatt---gtatccacaaggattgtcgttttgtctaaacaatttgcgttatt 23011769  T
Q  439 tatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 519  Q
    ||||||   | |||||||||| |||| |||||||||| |||||| |||| ||||||||| | ||| ||||||| ||||||||    
T  23011768 tatttagtctagacgatataataataaaagagttaagggttagatattgaaatttttatctatttccaacatatcaagttac 23011687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 29719335 - 29719136
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || ||||||    | ||||||||||||| ||||||||||||| |  ||||| |||| ||||    
T  29719335 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta---gattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgtta 29719239  T
Q  437 tttatttaaag-ttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgc 533  Q
     ||||||  || |||||| ||||    |||| |  |||| |||||||| ||||||||||||| ||| ||||||| |||||| |||| ||| |||||||||    
T  29719238 cttatttttagtttgacggtata----ataaaatataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgc 29719143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 540
Target Start/End: Original strand, 17349338 - 17349543
Alignment:
Q  322 cataatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatct 421  Q
    ||||||||||  || |||||| || ||||||||||| |||||||||||||||| ||| ||||| ||||   |||||||||||  |||||||||||| ||     
T  17349338 cataatgatgtgcagattaggcaa-tgtactaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaagattgtcgtttcgtcc 17349432  T
Q  422 aaacagttcgtgttatttattt--aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-tta 518  Q
    ||||| |||| |||| ||||||   ||||||||||||||    |||| || ||||       | ||||||||||||| ||||||||||| |||||| |||    
T  17349433 aaacatttcgcgttacttattttgtaagttgacgatata----ataaaagataag-------ggttgcaatttttatctgtttgcaacagagcaagttta 17349521  T
Q  519 cttgtttttggttgcagaaaag 540  Q
    |||||||||||||||| |||||    
T  17349522 cttgtttttggttgcaaaaaag 17349543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 501
Target Start/End: Complemental strand, 25885513 - 25885403
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 490  Q
    ||||||||||||| | ||||||||||| || ||||| || |||||| |||||| |    |||||||||||||| |||||||||| |||||| ||| ||||    
T  25885513 tatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttattttattccgacgatataaaataaaagagttaagggttagatatttcaat 25885414  T
Q  491 ttttatttgtt 501  Q
    |||||| ||||    
T  25885413 ttttatctgtt 25885403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 344 - 540
Target Start/End: Original strand, 28925524 - 28925716
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||||||||| || ||||||||||||| || |||||| ||   |   |||||||| |||||||||||||| || ||||| ||| ||||||||||||    
T  28925524 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgtt---gtatccacgtggattgtcgtttcgtccaaacaattcatgttatttattt 28925619  T
Q  444 ----aaagttgacgatataaaatataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcaga 536  Q
        ||  |||||||||||||| ||||      || |||||| |  |||||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  28925620 ttgtaagtttgacgatataaaagataa------agggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctg-ttttggttgcaga 28925712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 476 - 540
Target Start/End: Complemental strand, 25887873 - 25887808
Alignment:
Q  476 gttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||    
T  25887873 gttagagatttgcaatttttatctgtttgcaacagagcaagttacctatttttggttgcagaaaag 25887808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 337 - 452
Target Start/End: Complemental strand, 25888324 - 25888216
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||||| ||||   |||||||||||||||||||||||||    ||||| |||| ||||    
T  25888324 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagta---tcgtatccacatggattgtcgtttc----aaacaattcgcgtta 25888232  T
Q  437 tttatttaaagttgac 452  Q
     |||||| ||||||||    
T  25888231 cttattttaagttgac 25888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 327 - 580
Target Start/End: Complemental strand, 27909233 - 27908983
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| ||  || |||||||| ||||| |||||||||||||||| || |||||| ||   |||||||||||||||| || | |||||||| |||||    
T  27909233 tgatggtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacatgggttattgtttcatccaaaca 27909137  T
Q  427 gttcgtgttatttatt----taaagttgacgatataaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaag-ttact 520  Q
     |||  |||| |||||    |||  ||||||||||||||  |||     ||| ||||| |  ||||||||||||| ||||||||||| |||||| ||||     
T  27909136 attcacgttacttatttttgtaagtttgacgatataaaagttaa-----aagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacc 27909042  T
Q  521 tgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    || ||||||||||||||||  || || || |||||| | || ||||| ||||||||||||    
T  27909041 tg-ttttggttgcagaaaattaagcagcggttaggattcttcgaatcccccctatttata 27908983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 567
Target Start/End: Original strand, 30411805 - 30411889
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatc 567  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||| || || || |||||| |||| |||||    
T  30411805 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 30411889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 31805004 - 31804803
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||  |||||||| ||||||| || |||||| |||| |   |||||||||  ||||| |||||| || || || |  ||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtatt---gtatccacagagattgccgtttcgtccaaccaatctgtgtta 31804908  T
Q  437 tttattta---aagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggtt 531  Q
     ||||||    |||||||||||||||    ||| || |||| |||||||| ||||||||||||||||||||||| | ||| || |||| |||||||||||    
T  31804907 cttatttttgtaagttgacgatataa----taaaagataagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggtt 31804812  T
Q  532 gcagaaaag 540  Q
    |||||||||    
T  31804811 gcagaaaag 31804803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 537
Target Start/End: Original strand, 45553268 - 45553320
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 537  Q
    ||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaagttacctg-ttttggttgcagaa 45553320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 12953398 - 12953295
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||| ||||||||||| |  |||||| |||| |   || |||||||||||||||||||| || ||||| |||| ||||    
T  12953398 attaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtatt---gtgtccacatggattgtcgtttcgtcaaaacaattcgcgtta 12953302  T
Q  437 tttattt 443  Q
     ||||||    
T  12953301 cttattt 12953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 580
Target Start/End: Complemental strand, 26603320 - 26603225
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||||||||||| ||||||||||| ||||  |||| |||||||||||| ||||||| || || || |||||| | || ||||| ||||||||||||    
T  26603320 ttgcaatttttatctgtttgcaacagagcagtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatc-cccctatttata 26603225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 17890076 - 17890129
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  17890076 ttgcaatttttatatgtttgcaacagagcaagttacctg-ttttggttgcagaaa 17890129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 540
Target Start/End: Original strand, 13776384 - 13776533
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gca 488  Q
    |||||||||||||| ||||||| |||| || |||||   |  |||| |||||| ||||||||||||  ||||| ||||| |||| |||| |||||| |||    
T  13776384 tatcgtatccacatagattgtcatttcgtccaaacaacccacgttacttattttaagttgacgata--aaata-aagagataagggttaagagatttgca 13776480  T
Q  489 atttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||||| ||||||||||| || ||| |||| ||||||| ||| ||||||||    
T  13776481 atttttatctgtttgcaacagagtaagattacctgttttttgttccagaaaag 13776533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 576
Target Start/End: Complemental strand, 23933506 - 23933415
Alignment:
Q  483 attgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatt 576  Q
    |||||||||||||| ||||||||||| |||||||||||||  ||||||| || ||||| || || || |||||| | |||||||| ||||||||    
T  23933506 attgcaatttttatctgtttgcaacagagcaagttacttg-gtttggtttcacaaaagtaagcagcggttaggattctttgaatc-cccctatt 23933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 29883226 - 29883328
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta--ctatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttat 441  Q
    |||||||||||||  ||||||||||||||||||| |||||||| ||   |||| |||||||| | |||||||||||| ||| ||| |||  |||| ||||    
T  29883226 aagtgtactaaattgtttaccaagtaataaaatg-taagtaaaatattgtatcatatccacaagaattgtcgtttcaactagacaattcacgttacttat 29883324  T
Q  442 ttaa 445  Q
    ||||    
T  29883325 ttaa 29883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 540
Target Start/End: Complemental strand, 12953290 - 12953248
Alignment:
Q  499 gtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 540  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaag 12953248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 45553115 - 45553228
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||| | |||||| |||||||| ||||| |||| ||||||||||| || |||||||   | ||||||||  ||| ||||||||||||  || || ||    
T  45553115 tgatggttagattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaa---aatatcgtatttacagggattgtcgttttgtccaagca 45553211  T
Q  427 gttcgtgttatttattt 443  Q
     ||||||||| ||||||    
T  45553212 attcgtgttaattattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 580
Target Start/End: Complemental strand, 17675589 - 17675493
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||||||||||| ||||||||||| |||||| |||| || ||||||||||||||||  ||||| || |||| | |||| ||||  ||||| ||||||    
T  17675589 ttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagaaaaataaacagcggttagaatttttcgaattccccctgtttata 17675493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 25920391 - 25920448
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| ||| |  |||| ||||||||||||||||||||    
T  25920391 ttgcaatttttatctgtttgcaacagagcgattttacctgtttttggttgcagaaaag 25920448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 443
Target Start/End: Complemental strand, 24090979 - 24090927
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||||||||||||||||| |||| || ||||| ||| ||||| ||||||    
T  24090979 tatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttattt 24090927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 327 - 578
Target Start/End: Complemental strand, 25182542 - 25182294
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||  ||||| || |||| ||||||||| ||||||| ||  ||||| ||||   |||||| ||||||||||||| |||| |||||||     
T  25182542 tgatggtcggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagta---tcgtattcacatggattgtcatttcgtctaaact 25182446  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    | | | |||| |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||| | ||||||||| |||||||||| ||||||    
T  25182445 gcttgcgttacttattttaagttgacgatataaaataaaagagataagggttagagattgcaatttttatctatttgcaacagagcaagttacctgtttt 25182346  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctattta 578  Q
    ||||||||||||||||||||  | |||||||| |||||||| ||| ||||||    
T  25182345 tggttgcagaaaaggaaacagtggttaggactctttgaatcccccatattta 25182294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 327 - 566
Target Start/End: Original strand, 19786716 - 19786952
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||  |||| ||| ||||| |||||||||||||||| ||  ||||||||||   || |||||| | ||| ||||||||| || |||||    
T  19786716 tgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagta---tcatatccatagggactgtcgtttcgtccaaaca 19786812  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
      |||||||| || ||| ||||||| ||||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  19786813 actcgtgttacttgttttaagttgatgatataaaataaaagagataaaagttagagattgtaatttttatctgtttgcaacagagcaagttacatgtttt 19786912  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaat 566  Q
    || ||| |||||||||||||  | |||||||| |||||||    
T  19786913 tgattgtagaaaaggaaacaatggttaggactctttgaat 19786952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 337 - 540
Target Start/End: Original strand, 14528144 - 14528343
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||| | ||||| |||||||||||||||| || || ||| ||||   |||||||||||| |||||||||||| || |||||  ||  ||||    
T  14528144 attaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagta---tcgtatccacatagattgtcgtttcgtccaaacaactcacgtta 14528240  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 536  Q
     |||||| ||  ||||||||||||||| || ||||||| ||||||||||||||||||||  ||||||||||| |||||||||| ||  ||||||||||||    
T  14528241 cttattttaaactgacgatataaaataaaatagttaagggttagagattgcaatttttagctgtttgcaacaaagcaagttacctg-gtttggttgcaga 14528339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 391 - 579
Target Start/End: Original strand, 13697901 - 13698086
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 490  Q
    ||||||||||||| ||||| ||||||| || |||||    | |||| |||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  13697901 tatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattttaagttgacgatataaaatacaagagataagggttagagattgcaat 13698000  T
Q  491 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    |||||| | ||||||||| |||||||||| ||  |||||||||||||||| || ||  | ||| |||| |||||||| |||||||||||    
T  13698001 ttttatctctttgcaacagagcaagttacctg--tttggttgcagaaaagtaagcagtgattatgactctttgaatc-cccctatttat 13698086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 327 - 540
Target Start/End: Original strand, 34497100 - 34497310
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| |||||| |||| ||  ||||| |||||||||||||||| || | |||| ||||   ||||||||| |  || ||||||||| || |||||    
T  34497100 tgatggtcagattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagta---tcgtatccatagagactgtcgtttcgtccaaaca 34497196  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaa-gagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
     | |  |||| |||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||| | |||||||||||||| ||||| ||  |    
T  34497197 atccacgttacttattttaaattgacgatataaaataaaagagttaaagggttagagattgcaatttttatctttttgcaacatagcatgttacctg-gt 34497295  T
Q  526 ttggttgcagaaaag 540  Q
    ||| |||||||||||    
T  34497296 ttgcttgcagaaaag 34497310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 496
Target Start/End: Complemental strand, 30806613 - 30806440
Alignment:
Q  325 aatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtac--tatcgtatccacatggattgtcgtttcatcta 422  Q
    ||||||||||  |||||| |||||||  ||||| ||||  |||||||||| || |||||| ||||   ||||   |||||| |||||||||||||||| |    
T  30806613 aatgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatcca 30806514  T
Q  423 aacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttat 496  Q
    |||| || | |||| |||||| |  |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30806513 aacaatttgcgttacttattttagtttgacgatataaaataaaagagttaagggttagagattgcaatttttat 30806440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 29382465 - 29382265
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| |||||||||||||||| ||||| || | ||||    
T  29382465 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacagggattgtcgtttcatccaaacaatttgcgtta 29382369  T
Q  437 tttatt----taaagttgacgatataaaatataagagttaagagttag--agattgcaatttttatttgtttgcaacatagcaagt-tacttgtttttgg 529  Q
     |||||    |||  |||||||||||||       ||||||  |||||  || ||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  29382368 cttatttttgtaagtttgacgatataaa-------agttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatttttgg 29382276  T
Q  530 ttgcagaaaag 540  Q
    |||||||||||    
T  29382275 ttgcagaaaag 29382265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 344 - 540
Target Start/End: Complemental strand, 13315089 - 13314896
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| | |||||||||||||||||||| || ||||||   || ||||||||||||||||||| | ||||| || ||||| |||| |||| ||||||    
T  13315089 aagtgtaccagatcatttaccaagtaataaagtgataagta---tagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttattt 13314993  T
Q  444 --aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaa 539  Q
       ||||||||||||||    |||| || |||  |||||||| ||||||||||||| ||||||||||  | | || |||| |||||||||||||||||||    
T  13314992 tataagttgacgatata----ataaaagataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcagaaaa 13314897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 337 - 517
Target Start/End: Complemental strand, 24114386 - 24114211
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||  ||||||||||||||||||| |||||| ||   |||||||||| || ||||||||||||| || |||||  | | ||||    
T  24114386 attaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagag---tatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgtta 24114290  T
Q  437 tttattt---aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagtt 517  Q
     ||||||    ||||||||||||||||| ||||| ||||     || || ||||||||||||| |||||||| || ||||||||    
T  24114289 cttatttttgtaagttgacgatataaaagataagggtta-----taaaggttgcaatttttatctgtttgcagcagagcaagtt 24114211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 337 - 580
Target Start/End: Original strand, 24269593 - 24269831
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||| ||||||||||||||||| || |||||| ||   ||||||||||||| ||||||||||||| || ||||| |||   |||    
T  24269593 attaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagag---tatcgtatccacagggattgtcgtttcgtccaaacaattcacatta 24269688  T
Q  437 tttatt----taaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttg 532  Q
    ||||||    |||  |||||| ||||||| |||||||||   |  |||   ||||||| ||||| ||||||||||| || |  |||| ||||||||||||    
T  24269689 tttatttttgtaagtttgacggtataaaaaataagagtttgaa--tag---ttgcaatctttatctgtttgcaacagagtagtttacctgtttttggttg 24269783  T
Q  533 cagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    |||||||| || || || |||||| | || ||||| ||||| ||||||    
T  24269784 cagaaaagtaagcagcggttaggattcttcgaatcccccctgtttata 24269831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 478 - 537
Target Start/End: Complemental strand, 44010990 - 44010931
Alignment:
Q  478 tagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 537  Q
    ||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||    
T  44010990 tagagattgcaatttttatatgtttgcaacagaacaagttacatgtttttggttgcagaa 44010931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 337 - 538
Target Start/End: Original strand, 6884953 - 6885150
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||||||||| | |||| ||||||||| || ||||| |     ||||||||| ||||||||||||||||| || |||||  | | | ||    
T  6884953 attaggcaagtgtactaaatcgtgtacccagtaataaagtgataagtgag----tatcgtatctacatggattgtcgtttcgtccaaacaacttgcgcta 6885048  T
Q  437 tttatttaaagtt-gacgatataaaatataagagttaagagtt-agagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgc 533  Q
     |||||| ||||| |||||||  ||||| ||||| |||| ||| ||||||| ||||||||||| |||||| || | || ||||||| |||||||||||||    
T  6885049 cttattttaagtttgacgata--aaata-aagagataagggtttagagatttgcaatttttatctgtttgtaatagagtaagttacctgtttttggttgc 6885145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 5850926 - 5851039
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||  ||||||||  |||| |||||||||||||||| || |||||| ||||   |||||||||||| ||||||||||||| | |||||    
T  5850926 tgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatagattgtcgtttcaaccaaaca 5851022  T
Q  427 gttcgtgttatttattt 443  Q
     | ||||||| ||||||    
T  5851023 atccgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 442
Target Start/End: Original strand, 15238784 - 15238896
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||  ||||  |||||||||||| |||||| ||||||    | ||||||||||||||| ||||||||||| ||||||||    
T  15238784 tgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagta---gattatcgtatccacatgaattgtcgtttcgtctaaaca 15238880  T
Q  427 gttcgtgttatttatt 442  Q
     |||| |||| |||||    
T  15238881 attcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 18448502 - 18448446
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||| ||||||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  18448502 ttgcagtttttatctgtttgcaacagagcaagttacctgtttttggttgcataaaag 18448446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 579
Target Start/End: Original strand, 7983716 - 7983813
Alignment:
Q  480 gagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||||||||||||||||| ||||||| |||||||||||| | ||  |||||||||||||||| || || ||  ||||| | |||||||| |||||||||||    
T  7983716 gagattgcaatttttatctgtttgcgacatagcaagttgcctg-gtttggttgcagaaaagtaagcaacgggtaggattctttgaatc-cccctatttat 7983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 14075590 - 14075667
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||| || ||||| ||||| |||||||||||| ||| || |||||| |   |||||||||||||||||||||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtaga---ctatcgtatccacatggattgtcgtttca 14075667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 2637615 - 2637679
Alignment:
Q  359 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||| ||||||||||| || |||||| ||||   ||||||||||||||||||||||||| ||||||||    
T  2637615 tttatcaagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcgtctaaaca 2637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 339 - 426
Target Start/End: Original strand, 24904630 - 24904714
Alignment:
Q  339 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||| |||||||| |||||||||||||| ||||||| || |||||| ||   |||| ||||||||  |||||||||||| ||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagag---tatcatatccacagtgattgtcgtttcgtctaaaca 24904714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 426
Target Start/End: Complemental strand, 17101990 - 17101911
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||||  ||||| |||||||||||||||| || |||||| ||||   ||||||||| | |||||||||||||||| |||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccatagggattgtcgtttcatccaaaca 17101911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 567
Target Start/End: Original strand, 18569193 - 18569276
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatc 567  Q
    |||| |||||||| ||||||||||||||| || ||||||| ||||||||||||||||| || || || ||| || ||||||||||    
T  18569193 ttgctatttttatctgtttgcaacatagcgagtttacttg-ttttggttgcagaaaagtaagcagcggttacgattttttgaatc 18569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 14006091 - 14006142
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 389  Q
    |||||||||||||  | ||||||||||||||||||||||| |||||| ||||    
T  14006091 ttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagta 14006142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 26008019 - 26008070
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 389  Q
    ||||| |||||||| |||||||||||||||||||||| || |||||| ||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagta 26008070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 540
Target Start/End: Original strand, 24644970 - 24645035
Alignment:
Q  478 tagagattgcaattttt--atttgtttgcaacatagcaa-gttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||||||  || | ||||||||||| ||| ||||| ||||||||||||||||||||    
T  24644970 tagagattgcaatttttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaag 24645035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 31288354 - 31288430
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||| |||||||| ||||| |||||||||||||||| || |||||||||   ||||||||||| | |||||||| |||||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaag---tatcgtatccatagggattgtcttttca 31288430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 14628371 - 14628420
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaa 386  Q
    |||||| |||| ||| ||||||||||||||||||||| ||| ||||||||    
T  14628371 attaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaa 14628420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 24110752 - 24110707
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 389  Q
    |||||||  ||||||||||||||||||||||||| |||||| ||||    
T  24110752 aagtgtatcaaatcatttaccaagtaataaaatgataagtagagta 24110707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 30235372 - 30235421
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaa 386  Q
    |||||| |||||||| ||||| |||||||||||||||| || ||||||||    
T  30235372 attaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagtaaa 30235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 17976614 - 17976705
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcg 431  Q
    |||||| |||||| | |||||||||| ||||||||||| || |||||| ||   |||||||||||||  |||| ||||||| |||| ||| ||||    
T  17976614 attaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagag---tatcgtatccacaaagattttcgtttcgtctacacatttcg 17976705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  347 tgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcg 413  Q
    ||||| ||||| |||||||||||||||| || |||||| ||   |||||||||||||| ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 327 - 580
Target Start/End: Original strand, 54845 - 55095
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt-catctaaac 425  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| || |||||| |||| |   ||||||||| |||||||||||| | ||||||     
T  54845 tgatggtcggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatt---gtatccacagggattgtcgttttcgtctaaat 54941  T
Q  426 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    || | | |||| |||||| ||||| ||||||||||||| || || |||| |||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  54942 agcttgcgttacttattttaagttaacgatataaaataaaaaagataagggttagagattccaatttttatttgtttgcgacatagcaagttacctgttt 55041  T
Q  526 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||||||| ||||| |||||  | |||||||| |||||||| ||||||||||||    
T  55042 ttggttgcacaaaagaaaacactggttaggactctttgaatc-cccctatttata 55095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 9e-50; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 324 - 578
Target Start/End: Original strand, 11176932 - 11177183
Alignment:
Q  324 taatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaa 423  Q
    |||||||||||  |||||| ||||||||  |||| |||||| |||| |||| || |||||| ||||   |||||||||||||| |||||||||| || ||    
T  11176932 taatgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagta---tcgtatccacatgggttgtcgtttcttcgaa 11177028  T
Q  424 acagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgt 523  Q
    | | ||||||||| |||||| || |||||||||||||||| ||||| |||| |||||| ||||||||||||||  ||||||||||||||||||||| |||    
T  11177029 ataattcgtgttacttattttaaattgacgatataaaataaaagagataagggttagaaattgcaatttttataagtttgcaacatagcaagttacctgt 11177128  T
Q  524 ttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctattta 578  Q
    |||| ||| || ||||||||||| || |||||||| ||| |||| || |||||||    
T  11177129 tttttgttacataaaaggaaacagcggttaggactctttaaatcccctctattta 11177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 327 - 573
Target Start/End: Complemental strand, 28933774 - 28933532
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| | ||  |||| ||| ||||||| || |||||| ||||   ||||||||||| ||||| ||||||| || |||||    
T  28933774 tgatggtcggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagta---tcgtatccacaaggattatcgtttcgtccaaaca 28933678  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
     || |||||  |||||| ||||||| ||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  28933677 atttgtgttgcttattttaagttgatgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacttgttct 28933578  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccct 573  Q
    |||||||| ||||||||||| || |||||||| |||||||| |||||    
T  28933577 tggttgca-aaaaggaaacagcggttaggactctttgaatcccccct 28933532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 344 - 580
Target Start/End: Complemental strand, 12183428 - 12183196
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   |||||||||||||||||||| |||| ||  |||| |||  |||| ||||||    
T  12183428 aagtgtaccaaatcgtttaccaagtaataaagtgataagtacagta---tcgtatccacatggattgtcatttcgtcctaacaattcacgttacttattt 12183332  T
Q  444 aaagttgacgatataaaatataagagttaagag-ttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagga 542  Q
     ||| ||||||||||||||| ||||||| | || |||||||||||||| ||||| |||||||||||||||||||||| || |||||||| |||||||| |    
T  12183331 taaggtgacgatataaaataaaagagtttaaaggttagagattgcaatgtttatctgtttgcaacatagcaagttacctg-ttttggttacagaaaagta 12183233  T
Q  543 aacatcgtttaggactttttgaatcacccctatttata 580  Q
    | || || |||||| | || ||||| ||||||||||||    
T  12183232 agcaacggttaggattcttcgaatc-cccctatttata 12183196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 327 - 567
Target Start/End: Original strand, 21907417 - 21907656
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||| ||| ||||| |||||||||||||||| || |||||||||||   ||||||||||| ||||||||||||| || ||| |    
T  21907417 tgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagta---tcgtatccacaaggattgtcgtttcgtccaaaaa 21907513  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgca--atttttatttgtttgcaacatagcaagttacttgtt 524  Q
      ||| |||| ||| || ||||||| ||||||||||| ||||| |||| |||||| ||| ||  |||||||| ||||||||||| |||||||||  | ||    
T  21907514 agtcgcgttacttaatttaagttgatgatataaaataaaagagataagggttagaaattacataatttttatctgtttgcaacagagcaagttagctatt 21907613  T
Q  525 tttggttgcagaaaaggaaacatcgtttaggactttttgaatc 567  Q
    |||||||||| ||||||||||| || ||| |||| ||||||||    
T  21907614 tttggttgcaaaaaaggaaacagcggttacgactctttgaatc 21907656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 391 - 580
Target Start/End: Complemental strand, 6630745 - 6630556
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 490  Q
    ||||| |||||||| |||||||||||| ||||||| | | | |||| |||||| |||||||| |||||||||| ||||  |||  |||||||||||||||    
T  6630745 tatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattttaagttgacaatataaaataaaagatataaaggttagagattgcaat 6630646  T
Q  491 tttta-tttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||| ||| ||||||||| |||||||||| |||||||||||||| ||| ||||| | || |||||||| ||||||| |||||||||||||    
T  6630645 ttttattttttttgcaacagagcaagttacctgtttttggttgcaaaaatggaaatagcggttaggactctttgaat-acccctatttata 6630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 451 - 579
Target Start/End: Original strand, 8241381 - 8241505
Alignment:
Q  451 acgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgt 550  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||| ||||||| || || |      
T  8241381 acgatataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacatagcaagttacctg--tttggttgtagaaaagtaagcagcag 8241478  T
Q  551 ttaggactttttgaatcacccctatttat 579  Q
    ||| ||||||||||||| |||||||||||    
T  8241479 tta-gactttttgaatc-cccctatttat 8241505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 337 - 546
Target Start/End: Original strand, 15466365 - 15466569
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| ||| | ||| ||||   ||||||| | | |||||||| |||| |||||||| |||| ||||    
T  15466365 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgt-acgtagagta---tcgtatcaatagggattgtcatttcgtctaaacaattcgcgtta 15466460  T
Q  437 tttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 535  Q
     ||||||    || ||||||||| |||| |||||||||| |||||||||||||| |||||| ||||||||||| ||||||||||   | |||||||||||    
T  15466461 gttattttgttttaacgatataataataaaagagttaagggttagagattgcaaattttatctgtttgcaacagagcaagttac--ctatttggttgcag 15466558  T
Q  536 aaaaggaaaca 546  Q
    ||||| |||||    
T  15466559 aaaagtaaaca 15466569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 344 - 540
Target Start/End: Original strand, 4339737 - 4339929
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||  |||| ||| ||||||| || |||||| |||| |   |||||||||  |||||||||||  || || || ||||  ||| ||||||    
T  4339737 aagtgtaccaaattgtttatcaaataataaagtgataagtagagtatt---gtatccacaatgattgtcgttttgtccaaccaattcgcattacttattt 4339833  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
     |  |||||||||||||||| ||||| |||| |||||||||| |||| ||||||||||||||||  |||||||||| || |||||||||||||||||    
T  4339834 tagtttgacgatataaaataaaagagataagggttagagattacaatatttatttgtttgcaactaagcaagttacctg-ttttggttgcagaaaag 4339929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 540
Target Start/End: Original strand, 9838406 - 9838550
Alignment:
Q  395 gtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaattttt 494  Q
    |||||||||||||||||| |||  |  |||||  ||| |||| |||||| |  |||||||||||||||| |||||| ||| ||||||||||| |||||||    
T  9838406 gtatccacatggattgtcattttgttgaaacaactcgcgttacttattttagtttgacgatataaaataaaagagtgaagcgttagagattgtaattttt 9838505  T
Q  495 atttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    || ||||||||| | ||||||||||  | |||||||||||||||||    
T  9838506 atctgtttgcaaaagagcaagttacccg-ttttggttgcagaaaag 9838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 540
Target Start/End: Complemental strand, 17827145 - 17827000
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagtt-gacgatataaaatataagagttaagagttagagattgcaa 489  Q
    ||||||||||||||||||||||||||| || ||||| |||| |||| ||||||    || ||| |||||||| ||||| ||||| ||    || ||||||    
T  17827145 tatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttttttttgacaatataaaagataagggttaaaag----ag-ttgcaa 17827051  T
Q  490 tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  17827050 tttttatatgtttgcaacatagcagtttacttgtttttggttgcagaaaag 17827000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 526
Target Start/End: Complemental strand, 21672539 - 21672352
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| ||||| || ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||| || |||| || ||||| |||||||||    
T  21672539 attaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattatcttttcgtccaaacaattcgtgtta 21672443  T
Q  437 tttatttaaagttgacgatataaaatataagagtt-aagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
     || |||  ||||||||||| |||  ||||||||| |||  ||||||| ||||||||||||| | ||||||||  |||||||||| ||||||    
T  21672442 cttttttttagttgacgata-aaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgtttt 21672352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 327 - 577
Target Start/End: Original strand, 22567825 - 22568069
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||  |||||||||||||||  ||  ||||| |||| |   ||||||||||||||||| ||||| || |||||    
T  22567825 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtatt---gtatccacatggattgtggtttcgtccaaaca 22567921  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
      ||  |||| |||||| ||||| ||||||||||||| ||| |||||| ||||||||||| || |||||| ||||||||||| ||  |||||| |   ||    
T  22567922 actcacgttacttattttaagttaacgatataaaataaaagggttaagggttagagattgtaa-ttttatctgtttgcaacagagtcagttacct-agtt 22568019  T
Q  527 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctattt 577  Q
    |||||||||||||| || || || | | |||| ||||||| ||||||||||    
T  22568020 tggttgcagaaaagtaagcaacggtaatgactctttgaat-acccctattt 22568069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 347 - 540
Target Start/End: Complemental strand, 23645861 - 23645672
Alignment:
Q  347 tgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaa 446  Q
    ||||| ||||| |||||||||||||||| || |||||| ||   ||||||||||| | ||||||||||||| || ||||| ||   |||| ||||||       
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattattt--- 23645768  T
Q  447 gttg-acgat---ataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
     ||| || ||   |||||||| ||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||    
T  23645767 -ttgaacaataaaataaaataaaagagttgagggttagagattgcaatttttatttgtttgcaacagagcaagttacatg-ttttggttgcataaaag 23645672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 526
Target Start/End: Complemental strand, 21679955 - 21679768
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| ||||| || ||||| ||||| |||||||||| || |||||| ||||   ||||||||||||||||| || |||| || ||||| |||||||||    
T  21679955 attaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagta---tcgtatccacatggattatcttttcgtccaaacaattcgtgtta 21679859  T
Q  437 tttatttaaagttgacgatataaaatataagagtt-aagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
     || |||  ||||||||||| |||  ||||||||| |||  ||||||| ||||||||||||| | ||||||||  |||||||||| ||||||    
T  21679858 cttttttttagttgacgata-aaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgtttt 21679768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 538
Target Start/End: Complemental strand, 22410409 - 22410234
Alignment:
Q  359 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattta-tttaaagttgacgatat 457  Q
    ||||||||||||||||||| |||||| ||||   ||||||||||| |||||||||||||||  ||||| |||  |||| ||| ||| |||||||||||||    
T  22410409 tttaccaagtaataaaatgataagtagagta---tcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatat 22410313  T
Q  458 aaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaa 538  Q
    |    |||| || |||| ||||| |  ||||||||||||| ||||||||||| |||||| || | | ||||||||||||||||    
T  22410312 a----ataaaagataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcagaaa 22410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 9726007 - 9726120
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| || |||||| ||   ||||||||||||||||||||||||||| || |||||    
T  9726007 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacatggattgtcgtttcgtccaaaca 9726103  T
Q  427 gttcgtgttatttattt 443  Q
     || | |||| ||||||    
T  9726104 atttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 337 - 517
Target Start/End: Complemental strand, 27737793 - 27737616
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||||||||| |||||||||||||||| || |||||| ||   |||| || ||||| ||||||| ||||| || ||||| |||| ||||    
T  27737793 attaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagag---tatcatacccacaaggattgttgtttcgtccaaacaattcgcgtta 27737697  T
Q  437 tttattt---aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 517  Q
     ||||||    |||||||||  |||||||  ||||  |||| |||||||| ||||||||||||| ||||||||||| ||||||||    
T  27737696 cttatttttgtaagttgacg--ataaaatgaaaga--taagggttagagagttgcaatttttatctgtttgcaacagagcaagtt 27737616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 503
Target Start/End: Complemental strand, 21688899 - 21688736
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| ||||||||  |||| ||||| ||||||| || || |||||| |||| |   ||||||| | ||||||||||| |||| ||| | |||| ||||    
T  21688899 attaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtatt---gtatccatagggattgtcgttacatccaaaaaattcgcgtta 21688803  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 503  Q
     ||||||  |||||| ||||||||||| ||||||||   |||||||||||| |||||||| ||||||    
T  21688802 cttattttgagttgaagatataaaataaaagagttagaggttagagattgcgatttttatatgtttg 21688736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 406 - 506
Target Start/End: Complemental strand, 8039177 - 8039074
Alignment:
Q  406 gattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa----aatataagagttaagagttagagattgcaatttttatttgtt 501  Q
    ||||||||||||||| ||||| ||||||||| ||||||    ||||||||||||    |||| |||||||||| ||||||||||||||||||||| ||||    
T  8039177 gattgtcgtttcatccaaacaattcgtgttacttattttgt-ttgacgatataataataataaaagagttaagggttagagattgcaatttttatatgtt 8039079  T
Q  502 tgcaa 506  Q
    |||||    
T  8039078 tgcaa 8039074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 23143717 - 23143838
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||||||| ||||||| || |||||| ||   |||| |||||||| ||||||||||||| || ||||| ||| |||||    
T  23143717 attaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagag---tatcatatccacagggattgtcgtttcgtccaaacaattcatgtta 23143813  T
Q  437 tttattt--aaagttgacgatataa 459  Q
     ||||||   |||||||||||||||    
T  23143814 cttattttgtaagttgacgatataa 23143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 327 - 576
Target Start/End: Complemental strand, 22566276 - 22566030
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  ||| ||||| ||||| |||| ||||||||||||||||| || |||||| ||||   || |||||||| | ||||||| ||| ||||| ||    
T  22566276 tgatggtcgaattgggtaaatgtaccaaattatttaccaagtaataaagtgataagtagagta---tcatatccacaagaattgtcgcttcgtctaagca 22566180  T
Q  427 gttcgtgttatttatttaaagttgacgatata-aaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaagttacttgtt 524  Q
     |||| |||| ||||||   ||| || | ||| ||||  ||||||| |||| ||  |||||||||||||||| |||||||||||   |||||||| | ||    
T  22566179 attcgcgttacttatttg--gttaacaaaatataaattaaagagttgagagataatagattgcaatttttatctgtttgcaacactacaagttacctatt 22566082  T
Q  525 tttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatt 576  Q
    |||| ||| ||||||| || || || |||||| |||||||||| || |||||    
T  22566081 tttgattgtagaaaagtaagcagcggttaggattttttgaatctcctctatt 22566030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 466
Target Start/End: Original strand, 9516787 - 9516909
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||| ||||||||| || |||||| ||||   ||||||||||||||||||||||||| || |||||  ||| |||| ||||||    
T  9516787 aagtgtaccaaatcgtttacctagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattt 9516883  T
Q  444 ---aaagttgacgatataaaatataa 466  Q
        ||||||||||||||||| ||||    
T  9516884 ttgtaagttgacgatataaaagataa 9516909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 337 - 417
Target Start/End: Original strand, 17729147 - 17729224
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    ||||||||||||||| ||||| |||||||||||||||| || |||||| ||   |||||||||||||  ||||||||||||    
T  17729147 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacaaagattgtcgtttc 17729224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 327 - 526
Target Start/End: Complemental strand, 25927417 - 25927223
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||| | |||||||||||||||| || |||||| | ||   ||||||||||||||||| | ||||| || |||||    
T  25927417 tgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaata---tcgtatccacatggattttagtttcgtccaaaca 25927321  T
Q  427 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagtta-gagattgcaatttttatttgtttgcaacatagcaagttacttgtt 524  Q
     |||  |||| |||||  ||    || ||| || |||| ||||||| || |||| ||||||||||||||||| ||||||||| | |||||||||| ||||    
T  25927320 attcacgttacttattctaa----acaataaaataataaaagagtttagggttaagagattgcaatttttatctgtttgcaatagagcaagttacctgtt 25927225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 580
Target Start/End: Complemental strand, 23844563 - 23844329
Alignment:
Q  343 taagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatt 442  Q
    ||||||||| ||||| ||||||||||||||||||| |||||| ||   |||| |||| | | ||||||||||||| || |||||  ||| |||| |||||    
T  23844563 taagtgtaccaaatcgtttaccaagtaataaaatgataagtagag---tatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatt 23844467  T
Q  443 t---aaagttgacgatataaaatataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcaga 536  Q
    |    ||||||||||||||||| ||||     ||| |||||| |  ||||||||||||| ||||||||| | | |||| |||| || ||||||||||| |    
T  23844466 tttgtaagttgacgatataaaagataa-----aagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctg-ttttggttgcata 23844373  T
Q  537 aaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    |||| || || || |||||| |||| ||||| | ||| ||||||    
T  23844372 aaagtaagcagcggttaggatttttcgaatccctcctgtttata 23844329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 20005879 - 20005824
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaa 538  Q
    ||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaa 20005824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 538
Target Start/End: Complemental strand, 24252282 - 24252137
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttga-cgatataa--aatataagagttaagagttagagattgc 487  Q
    ||||||||||||||||||||||||||  || ||||| ||| ||||| ||||||    |||| | ||| ||  |||| ||||| | || |||||| ||||     
T  24252282 tatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttattt----ttgaacaataaaataaataaaagagatgagggttagatattgt 24252187  T
Q  488 aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||||| ||||||||||| |||||||| | || |||||||||||||||    
T  24252186 aatttttatctgtttgcaacagagcaagtttcgtg-ttttggttgcagaaa 24252137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 540
Target Start/End: Original strand, 19244668 - 19244768
Alignment:
Q  440 atttaaagttgacgatataaaatataagagttaagagttagagattgcaattttt-atttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    |||| ||||||| ||||||||||| ||||| | || ||||||||||||| ||||| |  ||||||||||| |||||||||| ||  |||||||| |||||    
T  19244668 attttaagttgatgatataaaataaaagagatgagggttagagattgcactttttgaactgtttgcaacagagcaagttacctg-gtttggttgtagaaa 19244766  T
Q  539 ag 540  Q
    ||    
T  19244767 ag 19244768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 540
Target Start/End: Complemental strand, 22813680 - 22813625
Alignment:
Q  485 tgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||||||||||||| |||||| |||| || |||||||||||||||||    
T  22813680 tgcaatttttatttgtttgcaacaaagcaagtttacctg-ttttggttgcagaaaag 22813625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 417
Target Start/End: Complemental strand, 27124589 - 27124519
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    |||||||| ||||| |||||||||||||||| || ||| ||   || ||||||||| |||||||||||||||||    
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataatta---tattatcgtatcgacatggattgtcgtttc 27124519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 19244570 - 19244632
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 389  Q
    ||||||||| |||||| |||| ||||| ||| |||||||||||||||| || |||||| ||||    
T  19244570 tgatggtcagattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagta 19244632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 18075492 - 18075416
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 416  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||| | ||||   |||||||||| |||||||||||||    
T  18075492 attaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagta---tcgtatccacgtggattgtcgttt 18075416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 11136034 - 11136090
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaa 539  Q
    ||||||||||||| ||||||||||| ||| || |||| |||||||||||||| ||||    
T  11136034 ttgcaatttttatctgtttgcaacagagcgaacttacctgtttttggttgcaaaaaa 11136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 364 - 580
Target Start/End: Complemental strand, 43304 - 43092
Alignment:
Q  364 caagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaata 463  Q
    ||||||||||| || |||||||||||    |||||||||| ||||||||||||| ||||||||| |||||||| |||||| || ||||||||||||||||    
T  43304 caagtaataaagtgataagtaaagtaa---cgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaata 43208  T
Q  464 taagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttg 563  Q
     ||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||  ||| | || ||| |||| ||||    
T  43207 aaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacctgtttttggttacagaaaacaaaatagcggttaagactctttg 43108  T
Q  564 aatcacccctatttata 580  Q
    |||| ||||| ||||||    
T  43107 aatc-cccctgtttata 43092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 344 - 579
Target Start/End: Complemental strand, 21303451 - 21303220
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||  ||||| |||||||| |||||||||| |||||| ||||   ||||| |||||  |||||| |||||||| ||||| ||   |||| ||||||    
T  21303451 aagtgtatcaaatcgtttaccaaataataaaatgataagtagagta---tcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattt 21303355  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaa 543  Q
     |||||||| |||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||    
T  21303354 taagttgactatataaaataaaagagtaaagggttagagattgcaatttttatctgtttgcaacagagcaagttacttg-ttttggttgcagaaaagtaa 21303256  T
Q  544 acatcgtttaggactttttgaatcacccctatttat 579  Q
     || || |||||| | |||||||| |||||||||||    
T  21303255 gcagcggttaggattatttgaatcccccctatttat 21303220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 327 - 540
Target Start/End: Complemental strand, 12806004 - 12805795
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||||| || |||||| ||||   || ||||||||||||||||||||||||| |||||    
T  12806004 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgtttcatccaaaca 12805908  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
     || | |||| |||||| |||| |||| ||||||||| |||| | ||| ||||||||||||||||||||| ||||||||||| || || |||| ||  ||    
T  12805907 atttgcgttacttattttaagtcgacgttataaaataaaagattaaagggttagagattgcaatttttatctgtttgcaacagagaaaattacctg-att 12805809  T
Q  527 tggttgcagaaaag 540  Q
    ||||||||||||||    
T  12805808 tggttgcagaaaag 12805795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 337 - 540
Target Start/End: Original strand, 21325335 - 21325535
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||||| ||||   |||||||||||   ||||||||||| || ||||| || ||||||    
T  21325335 attaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagta---tcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgtta 21325431  T
Q  437 tttatttaaagttgacgatataaaatataagagtt-aagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 535  Q
     |||||| ||||| ||||||||||||| ||||||| ||| ||||||||||||||||||||| | ||||||||| |||||||||| |   |||||||||||    
T  21325432 cttattttaagttaacgatataaaataaaagagttgaagggttagagattgcaatttttatctatttgcaacagagcaagttacct-aatttggttgcag 21325530  T
Q  536 aaaag 540  Q
    |||||    
T  21325531 aaaag 21325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 344 - 540
Target Start/End: Complemental strand, 16245826 - 16245634
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| || || |||||||||||||||| || |||||| ||||   || |||||||||||||| || |||| || ||||| |||  |||| ||||||    
T  16245826 aagtgtaccaactcgtttaccaagtaataaagtgataagtagagta---tcatatccacatggattatcatttcgtccaaacaattctcgttacttattt 16245730  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
     |  ||||| |||  ||||| |||||||||| |||||||||| ||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  16245729 tagtttgacaata--aaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcagaaaag 16245634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 3116522 - 3116324
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||  |||||||||||||||| || ||||| |     ||| ||||||||| ||||||||||||| || ||||| |||  ||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtgag----tatagtatccacagggattgtcgtttcgtccaaacaattcacgtta 3116427  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 534  Q
     |||||| ||||||||||||  ||||| ||||| |||| |||| |||||| ||||||||||| ||||||||||| |||||| ||| || |||||||||||    
T  3116426 cttattttaagttgacgata--aaata-aagagataagggttaagagatttgcaatttttatctgtttgcaacagagcaagatacctggttttggttgca 3116330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 327 - 540
Target Start/End: Original strand, 5508321 - 5508529
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||||||| |||||||||||| || ||||| |     |||  |||||||||||||||||||||| || |||||    
T  5508321 tgatggtcgaattaggcaagtgtaccaaatcatttgccaagtaataaagtgataagtgag----tataatatccacatggattgtcgtttcgtccaaaca 5508416  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtt 524  Q
      ||| |||| |||||| ||| ||||||||  ||||| ||||| |||| |||| |||||| | ||||||||| ||||||||| | |||||||||| ||||    
T  5508417 tctcgcgttacttattttaaggtgacgata--aaata-aagagataagggttaagagatttgaaatttttatctgtttgcaatagagcaagttacatgtt 5508513  T
Q  525 tttggttgcagaaaag 540  Q
    ||| ||||||||||||    
T  5508514 ttttgttgcagaaaag 5508529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 327 - 572
Target Start/End: Original strand, 8319025 - 8319271
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| |||||| |||| ||| || || ||||||||||||| || || |||||| | ||   | ||||||||| ||||| ||||||| |  |||||    
T  8319025 tgatggtcagattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaata---tagtatccacagggattatcgtttcgtacaaaca 8319120  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatt------tgtttgcaacatagcaagttact 520  Q
     ||| ||||| |||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||      |||| |||||||||||| ||||     
T  8319121 attcatgttacttattttaagttgatgatataaaatacaagagataagagttagagattgcaattttttttttcttctgttagcaacatagcaaattacc 8319220  T
Q  521 tgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccc 572  Q
    |  ||||||||||| ||||| || ||  | |||||||| |||||||| ||||    
T  8319221 t-attttggttgcataaaagtaagcagtggttaggactctttgaatcccccc 8319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 10923134 - 10923238
Alignment:
Q  329 atggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt 428  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||| || ||| || ||   ||||||||||||  ||||||| ||||||||||||||||    
T  10923134 atggtcaaattaggttagtgtaccaaatcatttaccaagtaataaagtgataattacag---tatcgtatccacgaggattgttgtttcatctaaacagt 10923230  T
Q  429 tcgtgtta 436  Q
    ||| ||||    
T  10923231 tcgcgtta 10923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 540
Target Start/End: Original strand, 20429695 - 20429905
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| | |||||||||||  ||||||||||||||||||| |||||| ||   ||||||||| | | |||||||| ||||||| | |||    
T  20429695 tgatggtcggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagag---tatcgtatctataaggattgtcatttcatccacaca 20429791  T
Q  427 gttcgtgttattta--tttaaagttgacgatataaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaagttacttgt 523  Q
     |||| |||| |||  |||||  ||||||||||  |||| ||||| |||| ||||| || ||||||||||||| ||||||||||| ||||||||  |       
T  20429792 attcgcgttacttatttttaagtttgacgatat--aataaaagag-taagggttagaagtttgcaatttttatatgtttgcaacagagcaagtttatcta 20429888  T
Q  524 ttttggttgcagaaaag 540  Q
    |||||||||||||||||    
T  20429889 ttttggttgcagaaaag 20429905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 337 - 556
Target Start/End: Original strand, 21301913 - 21302130
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| ||   |||||||||||||||||||||| |||| || ||||| |||| ||||    
T  21301913 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacatggattgtcatttcgtccaaacaattcgagtta 21302009  T
Q  437 tttattt---aaagttgacgatataaaatataagagttaagagttagag-attgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggtt 531  Q
     ||||||    || |||||||||||    |||| || || | |||||||  ||| ||||||||| ||||||||||| |||||| |||| | |||||| ||    
T  21302010 cttatttttgtaaattgacgatata----ataaaagatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttgatt 21302105  T
Q  532 gcagaaaaggaaacatcgtttagga 556  Q
    ||||||||  ||||| || ||||||    
T  21302106 gcagaaaaataaacagcggttagga 21302130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 21825972 - 21825774
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||| ||||| ||||   ||||||||||||||||| | ||||| || |||||||||| ||||    
T  21825972 attaggtaagtgtaccaaatcgtttaccgagtaataaagtgt-aagtagagta---tcgtatccacatggatttttgtttcgtccaaacagttcgcgtta 21825877  T
Q  437 tttatttaaagttgacgatata-aaatataagagttaagagtta-gagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 534  Q
     ||||||    || || | ||| ||||| ||||||| |  | || ||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  21825876 cttatttggt-ttaacaaaatataaata-aagagttgatggataagagattgcaatttttatctgtttgtaacatagcaagttacct-tttttggttgca 21825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 451 - 567
Target Start/End: Original strand, 17155898 - 17156012
Alignment:
Q  451 acgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgt 550  Q
    ||||||||||| | |||||||| | |||||| |||||||||||||| ||||||||||| ||||||||||   | |||||||||||||||| ||  | ||     
T  17155898 acgatataaaaaaaaagagttacgggttagaaattgcaatttttatctgtttgcaacagagcaagttac--ctatttggttgcagaaaagtaagtagcga 17155995  T
Q  551 ttaggactttttgaatc 567  Q
    |||||||| ||||||||    
T  17155996 ttaggactatttgaatc 17156012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 456 - 540
Target Start/End: Original strand, 41508477 - 41508561
Alignment:
Q  456 ataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||| |||||||||| |||||||||| ||||||| ||| ||||||||||| |||||||||| || |||||||||||||||||    
T  41508477 ataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagttacatg-ttttggttgcagaaaag 41508561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 10917913 - 10918004
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcg 431  Q
    |||||| |||||||| ||||| |||||||| ||||||| || |||||| ||||   ||||||||||||||||||| ||||| |||||||||||||    
T  10917913 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtatccacatggattgttgtttcgtctaaacagttcg 10918004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 567
Target Start/End: Complemental strand, 2723831 - 2723713
Alignment:
Q  448 ttgacgatataaaatataagagttaagagttagagattgcaa-tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaaca 546  Q
    |||| ||||||||||| | |||||||| |||||| ||||||| ||||||| ||||||||||| |||||||||| ||  |||||||||| ||||| || ||    
T  2723831 ttgatgatataaaataaatgagttaagggttagatattgcaaatttttatctgtttgcaacaaagcaagttacctg--tttggttgcaaaaaagtaagca 2723734  T
Q  547 tcgtttaggactttttgaatc 567  Q
     || ||| |||| ||||||||    
T  2723733 gcggttaagactatttgaatc 2723713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 354 - 540
Target Start/End: Original strand, 4650243 - 4650420
Alignment:
Q  354 aatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacg 453  Q
    ||||||||||||||||||||| || | |||||||   ||||||||||||| |||||||| ||||  | ||||| |||| |||| |||||  |||||||||    
T  4650243 aatcatttaccaagtaataaagtgatgagtaaag---tatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt--aagttgacg 4650337  T
Q  454 atataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||| ||||  |||| ||||| |   |||  ||||||||||||| ||||||||||  |||||| |||| || |||||||||||||||||    
T  4650338 atacaaaagttaagggttaaaa---aga-cttgcaatttttatctgtttgcaacggagcaagtttacctg-ttttggttgcagaaaag 4650420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 526
Target Start/End: Complemental strand, 2167698 - 2167535
Alignment:
Q  360 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagtt-gacgatata 458  Q
    ||||||||||||||| || |||||| ||||   ||||||||||||  | ||||||||| || ||||| |||   ||| ||||||  |||| |||  ||||    
T  2167698 ttaccaagtaataaagtgataagtagagta---tcgtatccacataaaatgtcgtttcgtccaaacaattcacattacttatttttagtttgac--tata 2167604  T
Q  459 aaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    ||||| |||||| ||  |||||||||| ||||||||||| ||||||||||||| |||||||| ||||||    
T  2167603 aaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaagttacctgtttt 2167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 443
Target Start/End: Complemental strand, 821602 - 821515
Alignment:
Q  353 aaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||| ||||||| | |||||| ||| ||||| ||||||    
T  821602 aaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 8557212 - 8557130
Alignment:
Q  358 atttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    ||||||| ||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||||| || | |||| ||||||    
T  8557212 atttaccgagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 932884 - 932937
Alignment:
Q  487 caatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  932884 caatttttatttgtttgcaacagagcaagtttacttg-ttttggttgcagaaaag 932937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 540
Target Start/End: Original strand, 8170013 - 8170066
Alignment:
Q  488 aatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 540  Q
    ||||||||| ||||||||||||||| || |||| ||||||||||||||||||||    
T  8170013 aatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaag 8170066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 327 - 538
Target Start/End: Original strand, 10744887 - 10745093
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||| ||| |||||| |||| ||| ||||| |||||||||||||||| || |||||| ||||   |||| |||| | ||||||||||||| ||||||||    
T  10744887 tgatgatcaaattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtttccatagggattgtcgtttcgtctaaaca 10744983  T
Q  427 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtt 524  Q
      ||   ||| |||||| ||    || | || | |||| ||||||| || || ||||||| ||||||||||| | ||||||||| |||||||||| || |    
T  10744984 aatcacattaattattttaaa---acaaaattataataaaagagttgagggtaagagatttgcaatttttatctatttgcaacagagcaagttacctg-t 10745079  T
Q  525 tttggttgcagaaa 538  Q
    ||||||||||||||    
T  10745080 tttggttgcagaaa 10745093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 580
Target Start/End: Complemental strand, 17438512 - 17438295
Alignment:
Q  360 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt----aaagttgacgat 455  Q
    ||||||||| |||||||| |||||| ||||   || |||||||||||||||||||||| || ||||| |||  |||| ||||||    ||  ||||||||    
T  17438512 ttaccaagttataaaatgataagtagagta---tcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgat 17438416  T
Q  456 ataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaa-gttacttgtttttggttgcagaaaaggaaacatcgtttag 554  Q
    |||| | ||||  ||| |||     || ||||||||||||| ||||||||||| |||||  |||| || ||||||||||||||||| || || || ||||    
T  17438415 ataataaataaaggtttagaa----agcttgcaatttttatctgtttgcaacagagcaattttacctg-ttttggttgcagaaaagtaagcaacggttag 17438321  T
Q  555 gactttttgaatcacccctatttata 580  Q
    || | || ||||| || |||||||||    
T  17438320 gattcttcgaatcccctctatttata 17438295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 540
Target Start/End: Original strand, 19908421 - 19908502
Alignment:
Q  461 atataagagttaagagttaga-gattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||| ||||||| |||| | ||||| ||||||||||| ||||||||| |||||| |||| | ||||||||||||||||||    
T  19908421 atataaaagttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaag 19908502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 417
Target Start/End: Original strand, 12411136 - 12411223
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    ||||||||  || ||| |||||||| |||||| ||||||||||||||| || | |||| ||   ||||||||||||| |||||||||||||    
T  12411136 tgatggtcggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagag---tatcgtatccacaaggattgtcgtttc 12411223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 539
Target Start/End: Complemental strand, 18736657 - 18736578
Alignment:
Q  460 aatataagagttaagagttagagattgc-aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaa 539  Q
    |||| |||||||||| ||||||||||   ||||||||||||||||||||  | |||||||| || ||||||||||||||||    
T  18736657 aataaaagagttaagggttagagatttttaatttttatttgtttgcaaccgaacaagttacctg-ttttggttgcagaaaa 18736578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 519
Target Start/End: Original strand, 8445932 - 8445995
Alignment:
Q  456 ataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 519  Q
    |||||||| |||||||  | |||||||||||||||||||||  |||||||||| | ||||||||    
T  8445932 ataaaataaaagagtttggggttagagattgcaatttttatcagtttgcaacagaacaagttac 8445995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 12754881 - 12754827
Alignment:
Q  487 caatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||||||||||| ||| || |||| || |||||||||||||||||    
T  12754881 caatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaag 12754827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 8765244 - 8765300
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| |||||| |||| || |||||||||||||||||    
T  8765244 ttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaag 8765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 8770146 - 8770202
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| |||||| |||| || |||||||||||||||||    
T  8770146 ttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaag 8770202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 16229915 - 16229858
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| ||| || |||| |||||||||||||| |||||    
T  16229915 ttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaag 16229858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 28728955 - 28729035
Alignment:
Q  353 aaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||| ||||| ||||||||||| || |||||| ||||   |||||||||||| ||||||||||||| | ||||| |||| ||||    
T  28728955 aaataatttatcaagtaataaagtgataagtagagta---tcgtatccacatagattgtcgtttcaaccaaacaattcgcgtta 28729035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 8883084 - 8883028
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaa 539  Q
    ||||||||||||| ||||||||||||||| || |||| | ||||| |||||||||||    
T  8883084 ttgcaatttttatctgtttgcaacatagcgagtttacctatttttagttgcagaaaa 8883028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 418
Target Start/End: Original strand, 12759389 - 12759460
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    |||||||| ||||  |||||||||||||||| || |||||| ||   ||||||||||||| | ||||||||||||    
T  12759389 aagtgtaccaaattgtttaccaagtaataaagtgataagtagag---tatcgtatccacaagtattgtcgtttca 12759460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 22349411 - 22349490
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||||| ||||| |||||||| ||||||| || |||||| ||||   ||||||||||||  ||||||||||| || |||||    
T  22349411 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtatccacataaattgtcgtttcgtccaaaca 22349490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 337 - 580
Target Start/End: Complemental strand, 36099 - 35859
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| ||| |||||||||||||||| |||||||||| || |||||| ||||   ||||||||||||| |||||||||||||| ||| | |||||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagta---tcgtatccacatgaattgtcgtttcatccaaataattcgtgtta 36003  T
Q  437 tttatttaaag-ttgacgatataaaatataagagtt-aagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgc 533  Q
     |||||| ||| ||||||  |||||||||||||||| ||| |||||||| ||||||||||||| | |||| |||| || ||||||| || ||||||||||    
T  36002 cttattttaagtttgacg--ataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagttacctgattttggttgc 35905  T
Q  534 agaaaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||||| || || || |||||| | || ||||| ||||||||||||    
T  35904 agaaaagtaagcagcggttaggattcttagaatc-cccctatttata 35859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 337 - 579
Target Start/End: Original strand, 39579 - 39818
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt-tcgtgtt 435  Q
    |||||| |||||||| |||| ||||||||||||||||| || |||||| || |   |||||||||||| |||||| ||||  || ||| |   ||   ||    
T  39579 attaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagca---tcgtatccacattgattgttgttttgtccaaaaaaactcacttt 39675  T
Q  436 atttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 535  Q
    | |||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||||    
T  39676 acttattttaagttgacgatataaaataaaagagataagaattagagattgcaatttttatctgtttgcaacagagcaagttacctg-ttttggttgcag 39774  T
Q  536 aaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||||| || || || ||| |||| |||||||| |||||||||||    
T  39775 aaaagtaagcagcggttatgactctttgaatcccccctatttat 39818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 346 - 540
Target Start/End: Original strand, 33190681 - 33190871
Alignment:
Q  346 gtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaa 445  Q
    |||||| ||||| |||| |||||||||||||| |||||| ||||  ||   |||||||   ||||||||||||||||||||  |||||||| |||||| |    
T  33190681 gtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataat---atccacaacaattgtcgtttcatctaaacaactcgtgttacttatttta 33190777  T
Q  446 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||||||| || |||||||  |||||||||| |||||||||||||||||||||  ||||||||| ||  |||| |||||||||||    
T  33190778 agttgacgatataaaataaaatagttaaggtttagagattgtaatttttatttgtttgcaacagtgcaagttacctg-gtttgattgcagaaaag 33190871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 9787983 - 9787783
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| |||||||||| ||||||||||| || |||||| ||||   ||||||||| ||  ||||||||||| ||||||||  ||   |||    
T  9787983 attaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagta---tcgtatccatataaattgtcgtttcgtctaaacaactccaatta 9787887  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 536  Q
     |||||| ||||| | ||||||||||| |||||  ||| |||||||||||||||||| |  ||||||||||| ||||||| || ||||||||||||||||    
T  9787886 cttattttaagtttatgatataaaatagaagagaaaagggttagagattgcaattttgaactgtttgcaacagagcaagtgacctgtttttggttgcaga 9787787  T
Q  537 aaag 540  Q
    ||||    
T  9787786 aaag 9787783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 337 - 567
Target Start/End: Original strand, 22664201 - 22664428
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| || ||||| ||||| |||||||||||||||| || |||||| ||||   || |||||||  ||||| || |||| ||||||||  ||| |||     
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcttatccactgggattttcatttcgtctaaacaactcgcgttg 22664297  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 535  Q
     |||||| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| |||| |||||||||| || ||||||||||||    
T  22664298 cttattttaagttgacgatataaaataaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaagttacatg-ttttggttgcag 22664396  T
Q  536 aaaaggaaacatcgtttaggactttttgaatc 567  Q
    ||||| ||  | || |||||||| ||||||||    
T  22664397 aaaagtaagtagcggttaggactctttgaatc 22664428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 428 - 579
Target Start/End: Original strand, 28008188 - 28008338
Alignment:
Q  428 ttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttttt 527  Q
    ||||||||| |||||| ||||||||||||||||||| |||||| |||  |||||||||||||||||||| ||||| ||| | ||||| ||||||| ||||    
T  28008188 ttcgtgttacttattttaagttgacgatataaaataaaagagtaaaggattagagattgcaatttttatctgtttccaatagagcaaattacttg-tttt 28008286  T
Q  528 ggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||||||||||||| || || || |||||| | |||||||| |||||||||||    
T  28008287 ggttgcagaaaagtaagcagcggttaggattctttgaatctcccctatttat 28008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 438 - 540
Target Start/End: Complemental strand, 18101019 - 18100918
Alignment:
Q  438 ttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 537  Q
    |||||| || |||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  18101019 ttattttaatttgacgatataaaatagaagagttaagggttagaaattgcaatttttatctgtttgcaacatagcaagttacatg-ttttggttgcagaa 18100921  T
Q  538 aag 540  Q
    |||    
T  18100920 aag 18100918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 337 - 538
Target Start/End: Complemental strand, 23038115 - 23037918
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || ||||| |     ||||||||||||||||||||||||||| || |||||  ||  ||||    
T  23038115 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtgag----tatcgtatccacatggattgtcgtttcgtcaaaacaactctcgtta 23038020  T
Q  437 tttatttaaagttgacgat-ataaaatataagagttaagagtt-agagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 534  Q
     |||||| |||||   ||| |||||||| ||||| |||  ||| ||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  23038019 cttattttaagttt--gatgataaaataaaagagataatggttgagaaattacaatttttttctgtttgcaacatagcaagttacttgtttttggttgca 23037922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 344 - 538
Target Start/End: Complemental strand, 25405727 - 25405536
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| || || |||||||||||||||| || |||||||||||   ||||||||||| ||||||||||||| || |||||||||  |||| ||||||    
T  25405727 aagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagta---tcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T
Q  444 ---aaagttgacgatataaaa-tataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaa 538  Q
        ||||||||||||||||| | |||| ||||      | || ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  25405630 ttgtaagttgacgatataaaagtttaagggtta-----gaaagcttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcagaaa 25405536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 326 - 525
Target Start/End: Original strand, 24281261 - 24281457
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||||||  |||||| || ||||| ||||| |||||||||||||||| || ||||||    | |||| |||||||||||||| ||||||  ||  |||    
T  24281261 atgatggtccaattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagta---gattatcatatccacatggattatcgttttttccgaac 24281357  T
Q  426 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
    | || | |||| |||||| |||||||| |||||||||| |||||| ||| ||||||||||||||||| ||| |||||| |||| || ||||||| |||||    
T  24281358 aatttgcgttacttattttaagttgacaatataaaataaaagagtaaagggttagagattgcaatttctatctgtttgaaacagagaaagttacatgttt 24281457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 460 - 579
Target Start/End: Complemental strand, 12012797 - 12012680
Alignment:
Q  460 aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactt 559  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||| ||||| || |||||| |     
T  12012797 aataaaagagttaagggttagagattgcaatttttatttgtttgcaacatagcgagttacctg-ttttggttgcacaaaagtaaacaacgattaggattc 12012699  T
Q  560 tttgaatcacccctatttat 579  Q
    || ||||| |||||||||||    
T  12012698 ttcgaatc-cccctatttat 12012680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 344 - 540
Target Start/End: Complemental strand, 15544063 - 15543871
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||    ||||||||||| || ||||| ||||||||| ||||||    
T  15544063 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T
Q  444 a---aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaa 539  Q
        || |||||||||||||| ||||| ||||| ||    || |||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||    
T  15543966 ttttaatttgacgatataaaagataagggttaaaag----ag-ttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaa 15543872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 344 - 580
Target Start/End: Complemental strand, 13345433 - 13345202
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||  |||||||||||||||| || |||||| ||||   || |||||||||||||||||||||  || ||||| |||| |||| ||||||    
T  13345433 aagtgtaccaaattgtttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 13345337  T
Q  444 aaag-ttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagg 541  Q
    | || ||||||  |||||||| |||||||||  |||| ||| ||||| ||||||| | |||  |||||||| |||||| || ||||||||  |||||||     
T  13345336 atagtttgacg--ataaaataaaagagttaaaggttaaagatttgcagtttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagt 13345241  T
Q  542 aaacatcgtttaggactttttgaatcacccctatttata 580  Q
    ||||| || |||||| |||| ||||| ||||||||||||    
T  13345240 aaacagcggttaggatttttcgaatcccccctatttata 13345202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 501
Target Start/End: Original strand, 24214561 - 24214700
Alignment:
Q  359 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatata 458  Q
    |||||||||||||||| || |||||| ||||||   ||||||||||||||||| ||||| ||||||||  |   |||| |||||| |||| |||||||||    
T  24214561 tttaccaagtaataaagtgataagtacagtact---gtatccacatggattgttgtttcgtctaaacaacttacgttacttattttaagtggacgatata 24214657  T
Q  459 aaatataagagttaagagttagagattgcaatttttatttgtt 501  Q
    ||||| |||| ||||| ||| || |||| ||||||||| ||||    
T  24214658 aaataaaagaattaagggtttgaaattggaatttttatctgtt 24214700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 326 - 466
Target Start/End: Original strand, 12208585 - 12208725
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 425  Q
    |||||||||| ||  || |||||||||||||| |||||||||||||||| || ||||||    | |||| |||||||||||||||||||||| || ||||    
T  12208585 atgatggtcagatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagta---gaatatcatatccacatggattgtcgtttcgtccaaac 12208681  T
Q  426 agttcgtgttatttattt---aaagttgacgatataaaatataa 466  Q
    | |||| |||| ||||||    ||||||||||||||||| ||||    
T  12208682 aattcgcgttacttatttttgtaagttgacgatataaaagataa 12208725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 579
Target Start/End: Complemental strand, 15808016 - 15807886
Alignment:
Q  448 ttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacat 547  Q
    |||| ||||||||||| |||||||||  ||||  ||||||||||||||||||||||||||| ||||||||||  | ||||||||| ||||||  || ||     
T  15808016 ttgaagatataaaataaaagagttaatggttaaggattgcaatttttatttgtttgcaacagagcaagttaccag-ttttggttgtagaaaaataagcag 15807918  T
Q  548 cgtttaggactttttgaatcacccctatttat 579  Q
    || |||||| | |||||||| || ||||||||    
T  15807917 cgattaggattctttgaatccccactatttat 15807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 477 - 540
Target Start/End: Original strand, 16360003 - 16360065
Alignment:
Q  477 ttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  16360003 ttagagattgcaatttttatttgtttgcaacaaagcaagttacctg-ttttggttgcagaaaag 16360065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 344 - 580
Target Start/End: Complemental strand, 17610353 - 17610120
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||||||||||| |  |||||| ||||   ||||||||||||||||||||||||| || ||||| |||  |||| ||||||    
T  17610353 aagtgtaccaaatcgtttaccaagtaataaagttataagtagagta---tcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattt 17610257  T
Q  444 ----aaagttgacgatataaaatataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcaga 536  Q
        ||  ||||||||||||||       |||||  |||||| |  ||| ||||||||| ||||||||||| |||||||| || ||||||||||||||||    
T  17610256 ttgtaagtttgacgatataaaa-------gttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcaga 17610164  T
Q  537 aaaggaaacatcgtttaggactttttgaatcacccctatttata 580  Q
    |||| || || || |||||| | |||||| | ||||| ||||||    
T  17610163 aaagtaagcagcggttaggattctttgaaacccccctttttata 17610120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 517
Target Start/End: Original strand, 147677 - 147801
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 490  Q
    |||| ||| ||||||||||||| |||| ||||||||| ||| |||| |||||| || |||||||||| ||||| ||||| |||| |||||||||| |||     
T  147677 tatcatattcacatggattgtcatttcgtctaaacagctcgcgttacttattttaatttgacgatat-aaataaaagagataagggttagagatttcaa- 147774  T
Q  491 ttttatttgtttgcaacatagcaagtt 517  Q
    |||||| | ||||||||| ||||||||    
T  147775 ttttatctatttgcaacagagcaagtt 147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 540
Target Start/End: Complemental strand, 21973164 - 21973110
Alignment:
Q  486 gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaag 21973110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 327 - 532
Target Start/End: Original strand, 21847619 - 21847820
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||| |  |||||| ||   ||| ||||||||||||||||||||||| || |||||    
T  21847619 tgatggtcatattaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagag---tattgtatccacatggattgtcgtttcgtccaaaca 21847714  T
Q  427 gttcgtgttatttatttaaagttgacgata-taaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
     |||  |||| |||| |    || || | | ||||||| ||||||| |  | ||||||||||||||||||||||||||||||  ||||  |||||| |||    
T  21847715 attcacgttacttatct-ggtttaacaaaattaaaataaaagagttgaaggatagagattgcaatttttatttgtttgcaacggagcagtttacttattt 21847813  T
Q  526 ttggttg 532  Q
    || ||||    
T  21847814 tttgttg 21847820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 540
Target Start/End: Original strand, 14779567 - 14779760
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| |||||||||||||||||||||  || ||| || ||||   || |||||||| ||||||||||||| || |||||  ||| |||||||||||    
T  14779567 aagtgtaccaaatcatttaccaagtaataatgtgataattagagta---tcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttattt 14779663  T
Q  444 a---aagttgacgatataaaatataagagttaagagttaga--gattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaa 537  Q
        ||||||||||||||||| | ||     ||  ||||||  | ||||||||||||||||||| ||||||| |||| ||||||| ||||||||| ||||    
T  14779664 ttgtaagttgacgatataaaaaagaa-----aaaggttagaagggttgcaatttttatttgtttacaacatatcaagtttacttg-ttttggttgaagaa 14779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 540
Target Start/End: Complemental strand, 15813268 - 15813060
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||| |||| || |||||||| || ||||| |    |||||||||||||| ||||| ||||| | || |||||    
T  15813268 tgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagtga----ctatcgtatccacaaggattttcgttgcgtccaaaca 15813173  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtt 524  Q
      ||  |||| |||||| || |||||||||  ||||| ||||| |||| |||| ||| || ||||||||||| ||||| |||||||||||||||| |||     
T  15813172 actctcgttacttattttaatttgacgata--aaata-aagagataagggttaagaggtttgcaatttttatatgtttccaacatagcaagttacctgtc 15813076  T
Q  525 tttggttgcagaaaag 540  Q
    |||| ||||| |||||    
T  15813075 tttgcttgcaaaaaag 15813060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 540
Target Start/End: Original strand, 16179010 - 16179201
Alignment:
Q  345 agtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattta 444  Q
    ||||||| ||||| |||| ||||||||||| || |||||| ||||   ||||||||| | |||  |||||||| || ||||| ||| ||||| ||||||     
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagta---tcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttt 16179106  T
Q  445 ---aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
       ||||||||||||||||||||||| ||||   ||      ||||||||||||| || |||||||| |||||| |||| | ||||||||||||||||||    
T  16179107 tgtaagttgacgatataaaatataagggttagatgt-----cttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaag 16179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 420
Target Start/End: Original strand, 16359856 - 16359945
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatc 420  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||||| ||||||   || ||| ||||||||||| | ||||||||||||    
T  16359856 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagta---tagtattgtatccacatgtactgtcgtttcatc 16359945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 540
Target Start/End: Complemental strand, 17121465 - 17121405
Alignment:
Q  479 agagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||| |||| |||||||||||| | ||||||||||||| |||||||||||||||||    
T  17121465 agagattgcatttttcatttgtttgcaatagagcaagttacttg-ttttggttgcagaaaag 17121405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 51473978 - 51473781
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| || ||||| ||||| ||||||  |||||||| || |||||| ||||   ||||||||| ||||||||||||||  || ||||| || | ||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagta---tcgtatccatatggattgtcgttttgtccaaacaatttgcgtta 51473884  T
Q  437 tttatttaaagttgacgatataaaatataagagttaagag-ttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 534  Q
     || |||  ||| ||| |||  ||||| ||||||||| || ||||||||| ||||||||||| ||||||||||||| ||||||| |   |||||||||||    
T  51473883 cttgtttttagtcgacaata--aaataaaagagttaaaaggttagagatttgcaatttttatctgtttgcaacatatcaagtta-tctattttggttgca 51473787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 449
Target Start/End: Complemental strand, 26649067 - 26648966
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||  ||||| ||||||||||||||||||| ||||| ||    ||| ||||||||||||||| ||||||| || |||||  ||| |||||||||||    
T  26649067 aagtgtatcaaatcgtttaccaagtaataaaatgataagtgaa----tattgtatccacatggattatcgtttcgtccaaacaactcgcgttatttattt 26648972  T
Q  444 aaagtt 449  Q
     |||||    
T  26648971 taagtt 26648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 526
Target Start/End: Complemental strand, 16787712 - 16787645
Alignment:
Q  461 atataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
    ||||||||||| || |||| |||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  16787712 atataagagtttagggttaagagatttgcaatttttatatgtttgcaacatagcaaattacttgtttt 16787645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 573
Target Start/End: Complemental strand, 21334672 - 21334589
Alignment:
Q  490 tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccct 573  Q
    ||||||| ||||||||| |||||||||||| | |||||||||| ||||||| ||||| || |||||| | || ||||| |||||    
T  21334672 tttttatctgtttgcaaaatagcaagttacctatttttggttgaagaaaagtaaacagcggttaggattcttcgaatcccccct 21334589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 417
Target Start/End: Original strand, 21449091 - 21449161
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||   ||||||||||||| |||||||||||||    
T  21449091 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacaaggattgtcgtttc 21449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 540
Target Start/End: Complemental strand, 31236024 - 31235953
Alignment:
Q  471 taagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||| |||||||| ||||||||||||| | ||||||||| |||||| ||||||||||||||||||| |||||    
T  31236024 taagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaag 31235953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 473
Target Start/End: Complemental strand, 21666687 - 21666576
Alignment:
Q  362 accaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt---aaagttgacgatata 458  Q
    ||||||||||||| || |||||| ||||   |||||||||||||||||||| |||| || ||||| |||  |||| ||||||    ||||||||||||||    
T  21666687 accaagtaataaagtgataagtagagta---tcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgatata 21666591  T
Q  459 aaatataagagttaa 473  Q
    ||| ||||| |||||    
T  21666590 aaagataagggttaa 21666576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 3591767 - 3591681
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 416  Q
    ||||||||  |||||| |||||||| ||||| |||| ||||||||||| || ||| || ||   |||||||||||||| |||||||||||    
T  3591767 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagag---tatcgtatccacatagattgtcgttt 3591681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 538
Target Start/End: Complemental strand, 32382969 - 32382915
Alignment:
Q  483 attgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    |||||||||||||| ||||||||||| ||||| |||| || |||||||||||||||    
T  32382969 attgcaatttttatctgtttgcaacagagcaaattacctg-ttttggttgcagaaa 32382915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 32383112 - 32383065
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaa 374  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  32383112 tgatggtcaaattaggcaagtgtaccaaatcgtttaccaagtaataaa 32383065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 546
Target Start/End: Original strand, 155183 - 155217
Alignment:
Q  512 caagttacttgtttttggttgcagaaaaggaaaca 546  Q
    |||||||| ||||||||||||||||||||||||||    
T  155183 caagttacctgtttttggttgcagaaaaggaaaca 155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 17837502 - 17837615
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||  |||||||||||||||| |  |||||| ||   |||| |||||||| |||||||| |||  ||||||||    
T  17837502 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagag---tatcatatccacaaggattgtcattttgtctaaaca 17837598  T
Q  427 gttcgtgttatttattt 443  Q
     |||| |||| ||||||    
T  17837599 attcgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 21449218 - 21449272
Alignment:
Q  487 caatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    |||||||||| |||||||||||||||||| |||  ||||||||| ||||||||||    
T  21449218 caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcagaaaag 21449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 44795507 - 44795561
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||||||||| |||||||| || ||| |||||  ||||||||||||||||||    
T  44795507 ttgcaatttttatatgtttgcagcaaagcgagttatctgtttttggttgcagaaa 44795561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 14781827 - 14781770
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 540  Q
    ||||||||||||| |||||||| || ||||| || || ||||||||||||||||||||    
T  14781827 ttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaag 14781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 16916907 - 16916850
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| | ||||||||| ||| || |||| ||||||||||||||||||||    
T  16916907 ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaag 16916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 21987955 - 21987898
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaa-gttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| |||||  |||| |||||||||||||| |||||    
T  21987955 ttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaag 21987898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 418
Target Start/End: Complemental strand, 27117832 - 27117744
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||||||  |||||| |||| ||| ||||| |||||||||||||||| || |||||| ||   ||| |||| |||||| ||||||||||||    
T  27117832 tgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagag---tattgtattcacatgaattgtcgtttca 27117744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 443
Target Start/End: Original strand, 9401551 - 9401603
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    ||||||||||||||| ||||||||||| || ||||| |||| |||| ||||||    
T  9401551 tatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttattt 9401603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 461
Target Start/End: Original strand, 29242521 - 29242638
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||  |||| ||||||||||| || |||||| ||||   ||||||||| |  ||||||||||||||| ||||| |||| ||||  |||||    
T  29242521 aagtgtaccaaattgtttatcaagtaataaagtgataagtagagta---tcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T
Q  444 ---aaagttgacgatataaaa 461  Q
        |||||||||||||||||    
T  29242618 ttgtaagttgacgatataaaa 29242638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 528
Target Start/End: Original strand, 34481108 - 34481152
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttg 528  Q
    ||||||||||||| |||||| |||| |||||||||| ||||||||    
T  34481108 ttgcaatttttatatgtttggaacaaagcaagttacctgtttttg 34481152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 329 - 579
Target Start/End: Original strand, 715 - 960
Alignment:
Q  329 atggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt 428  Q
    ||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| |||| |   ||||| ||| ||||||||||||| || ||||| |    
T  715 atggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatt---gtatcaacaaggattgtcgtttcgtccaaacaat 811  T
Q  429 tcgt-gttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttttt 527  Q
     ||  |||| |||||| ||||||| ||||||||||| |||||||||| |||||||||| |||||||||  ||||||||||| || ||| ||| ||  |||    
T  812 ccgacgttacttattttaagttgaagatataaaataaaagagttaagggttagagatttcaatttttacctgtttgcaacagagtaagatacctg--ttt 909  T
Q  528 ggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||||| ||||||  || || || |||||||| |||||||| |||||||||||    
T  910 ggttgtagaaaactaagcagcggttaggactctttgaatc-cccctatttat 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 391 - 579
Target Start/End: Complemental strand, 2871 - 2684
Alignment:
Q  391 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaa 489  Q
    ||||||||||||||| ||||||||||| || ||||| ||||||||| ||||||    ||||| |||||| |||| |||||||||| ||||||||||||||    
T  2871 tatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacaatataataataaaagagttaagggttagagattgcaa 2772  T
Q  490 tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 579  Q
    ||||||||| |||||||||||||||||||| || |||  |||| ||||||| ||||| || ||| |||| || |||||  ||||||||||    
T  2771 tttttatttatttgcaacatagcaagttacatggttt--gttgtagaaaagtaaacaacggttaagactcttcgaatcctccctatttat 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 327 - 540
Target Start/End: Complemental strand, 18208362 - 18208155
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||| ||||| |||||||||| ||| ||||| ||||   |||||||||||||||||||| |||| || |||||    
T  18208362 tgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtgt-aagtagagta---tcgtatccacatggattgtcctttcgtccaaaca 18208267  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 526  Q
     ||| ||||| ||||||    |||| ||||||||||| |||||||||| ||| ||| ||||||||||||| ||||||||  | |||||||||| ||  ||    
T  18208266 attcatgttacttattttgttttgatgatataaaataaaagagttaagggttggaggttgcaatttttatctgtttgcagtagagcaagttacctg--tt 18208169  T
Q  527 tggttgcagaaaag 540  Q
    ||||||||||||||    
T  18208168 tggttgcagaaaag 18208155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 318 - 538
Target Start/End: Original strand, 18937724 - 18937940
Alignment:
Q  318 ttgacataatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    |||| ||| ||||||||  |||||| |||||||| ||||| ||||  |||||||||| || |||||||     |||||||| || | ||||||| |||||    
T  18937724 ttgagatattgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagtaag----tatcgtattcagagggattgttgtttc 18937819  T
Q  418 atctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtt-agagattgcaatttttatttgtttgcaacatagcaagt 516  Q
     || ||||| |||  |||| |||||| ||||| | ||||||||||| |||||||||| ||| ||||||| |||||||||| ||||||||||| |||||||    
T  18937820 gtccaaacaattcacgttacttattttaagttaatgatataaaata-aagagttaagggttgagagatttcaatttttatctgtttgcaacagagcaagt 18937918  T
Q  517 tacttgtttttggttgcagaaa 538  Q
    ||| ||||||||||||||||||    
T  18937919 tacatgtttttggttgcagaaa 18937940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 344 - 540
Target Start/End: Original strand, 34487640 - 34487831
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||  |||||||||||||||| ||| ||||| | ||   || |||||||||||||||||||||| |||||||| |||| |||| ||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtgt-aagtagaata---tcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattt 34487735  T
Q  444 aaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
        |||||||||||| |||| || || |||| ||||||||||||||||||||| ||||| ||||| ||||| |||| ||  ||||||||||||||||    
T  34487736 tgttttgacgatataataataaaaaagataagggttagagattgcaatttttatctgttttcaacagagcaatttacatg--tttggttgcagaaaag 34487831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 327 - 515
Target Start/End: Complemental strand, 24267068 - 24266883
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||| || |||  || |||||    
T  24267068 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattatcattttgtccaaaca 24266973  T
Q  427 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag 515  Q
     ||||||||| ||||||    |||||||||||| |||| |||||||||| |||||| |||||||||||||| |||||| |||| ||||||    
T  24266972 attcgtgttacttattttgttttgacgatataataataaaagagttaagggttagatattgcaatttttatctgtttgtaacaaagcaag 24266883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 327 - 515
Target Start/End: Complemental strand, 24343699 - 24343514
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||| || |||  || |||||    
T  24343699 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattatcattttgtccaaaca 24343604  T
Q  427 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag 515  Q
     ||||||||| ||||||    |||||||||||| |||| |||||||||| |||||| |||||||||||||| |||||| |||| ||||||    
T  24343603 attcgtgttacttattttgttttgacgatataataataaaagagttaagggttagatattgcaatttttatctgtttgtaacaaagcaag 24343514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 327 - 526
Target Start/End: Original strand, 22755506 - 22755703
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||  ||||||||  |||| ||||||||||||| ||  | |||||| ||||   ||||||||| | ||||||||||||| || |||||    
T  22755506 tgatggtcggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagta---tcgtatccataaggattgtcgtttcttccaaaca 22755602  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
     || |  |||||||||| |  || ||||||||||||| |||||||||| |||||||| || |||||||||| ||||||||||| ||||||||||| ||||    
T  22755603 attggcattatttattttagttttacgatataaaataaaagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagttactagttt 22755702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 519
Target Start/End: Complemental strand, 17171657 - 17171479
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    ||||||||||||||| ||||| |||| ||||||||||| || |||||| || |   ||||||||||||||||||||||||| ||||| || |||| ||||    
T  17171657 attaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagca---tcgtatccacatggattgtcgtttcgtctaagcaattcgcgtta 17171561  T
Q  437 tttatttaaagttgacgatata--aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 519  Q
     |||||| ||    || | |||  ||||| ||||||| || ||||||||||||||||||||| |  |||||||| ||||||||||    
T  17171560 attattttaa---aacaaaataataaataaaagagttgagggttagagattgcaatttttatctagttgcaacagagcaagttac 17171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 525
Target Start/End: Complemental strand, 19283969 - 19283774
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    ||||||||  |||||| ||||| |||||||| |||||||| ||||||| || |||||| |||| |   ||||||||| | |||  |||||| || |||||    
T  19283969 tgatggtcggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtatt---gtatccacaagaattaacgtttcgtccaaaca 19283873  T
Q  427 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
     || |  | | |||||| |||||||||||||||| || |||||||||| |||||||||| ||||||| || | ||||||| | || ||||||| |||||    
T  19283872 atttgcttaacttattttaagttgacgatataaagtaaaagagttaagggttagagattacaattttaatctatttgcaatagagaaagttacctgttt 19283774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 406 - 526
Target Start/End: Complemental strand, 24662214 - 24662094
Alignment:
Q  406 gattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgca 505  Q
    |||||| |||||  ||||||| |||  |||| |||||| |  || ||||||||||||| |||||||||| ||||| |||| ||||||||| ||||||| |    
T  24662214 gattgttgtttcgcctaaacaattcacgttacttattttagtttaacgatataaaataaaagagttaagggttagcgatttcaatttttagttgtttgaa 24662115  T
Q  506 acatagcaagttacttgtttt 526  Q
    ||| |||||||||||||||||    
T  24662114 acagagcaagttacttgtttt 24662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 24852276 - 24852173
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||| |||||||||  |||||||||||||||||| |||||| ||||   ||||||||||||||||||| ||||| |||||||| |||  ||||    
T  24852276 attaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagta---tcgtatccacatggattgttgtttcgtctaaacaattcacgtta 24852180  T
Q  437 tttattt 443  Q
     ||||||    
T  24852179 cttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 540
Target Start/End: Original strand, 36175247 - 36175327
Alignment:
Q  459 aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    ||||| ||||||| || ||||||||||||||||||||| ||||| ||||| |||||||||| || ||||||||| |||||||    
T  36175247 aaataaaagagttgagggttagagattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaag 36175327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 540
Target Start/End: Original strand, 15690773 - 15690971
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    ||||||||||| ||| ||||| |||||||| ||||||| || |||||| ||||   ||||||||||  | ||||||||||| || || || |||  ||||    
T  15690773 attaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagta---tcgtatccacgagaattgtcgtttcgtccaaccaattctcgtta 15690868  T
Q  437 tttatttaaagttgacgatataaaatataagagttaa-gagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 534  Q
     ||||||  ||||||| | ||||| || ||||||||| | |||||||||| |||||||||||||||| | |||| ||||| |||| || |||||||||||    
T  15690869 cttatttttagttgacaa-ataaa-taaaagagttaaagggttagagatttgcaatttttatttgttcgtaacagagcaaattacctg-ttttggttgca 15690965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 578
Target Start/End: Complemental strand, 24265443 - 24265342
Alignment:
Q  476 gttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctat 575  Q
    |||||| |||||||||||||| ||||||||| | |||||||||| | | ||| |||||||||||| || || || |||||||| |||||||  |||||||    
T  24265443 gttagatattgcaatttttatctgtttgcaataaagcaagttacct-tatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctat 24265345  T
Q  576 tta 578  Q
    |||    
T  24265344 tta 24265342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 578
Target Start/End: Complemental strand, 24342074 - 24341973
Alignment:
Q  476 gttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctat 575  Q
    |||||| |||||||||||||| ||||||||| | |||||||||| | | ||| |||||||||||| || || || |||||||| |||||||  |||||||    
T  24342074 gttagatattgcaatttttatctgtttgcaataaagcaagttacct-tatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctat 24341976  T
Q  576 tta 578  Q
    |||    
T  24341975 tta 24341973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 20564053 - 20563996
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||    
T  20564053 ttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaag 20563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 517
Target Start/End: Complemental strand, 20744654 - 20744597
Alignment:
Q  461 atataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 517  Q
    |||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  20744654 atataaaagttaagggttagagagttgcaatttttatctgtttgcaacatagcaagtt 20744597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Original strand, 15469931 - 15470034
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||| ||||| |||||||||||||||| || || ||  ||||   ||||||||||||| ||||||||||| |||||||| |||  | ||    
T  15469931 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagta---tcgtatccacatgaattgtcgtttcgtctaaacaattcacgcta 15470027  T
Q  437 tttattt 443  Q
    |||||||    
T  15470028 tttattt 15470034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 418
Target Start/End: Original strand, 17185465 - 17185536
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||||||||||||||||||||| ||||||| || |||||| ||   ||||||||| ||| ||||||||||||||    
T  17185465 aagtgtactaaatcatttaccaaataataaagtgataagtagag---tatcgtatctacagggattgtcgtttca 17185536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 17431885 - 17431964
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||||||||||| |||||||||||||||| ||  ||||| ||   |||||||||||||  ||||||||||||||| |||||    
T  17431885 aagtgtactaaatcgtttaccaagtaataaagtggaaagtagag---tatcgtatccacagagattgtcgtttcatccaaaca 17431964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 25550608 - 25550487
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| |||||||  ||||| |||||||||||||||| || |||||| ||   |||| |||||||| |||||||| |||| || ||||| ||| |||||    
T  25550608 attaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagag---tatcatatccacagggattgtcatttcgtccaaacaattcttgtta 25550512  T
Q  437 tttattt--aaagttgacgatataa 459  Q
     ||||||   |||||||||||||||    
T  25550511 cttattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 19004323 - 19004258
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtc 412  Q
    |||||||||||||| |||||||||||||||| || |||||   | | ||||||||||||||||||||||    
T  19004323 aagtgtactaaatcgtttaccaagtaataaagtgataagt---ggagtatcgtatccacatggattgtc 19004258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 24260635 - 24260708
Alignment:
Q  465 aagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||| || |||||||||| ||||||||||| ||||||||||| |||||||||| |  |||||||||||||||    
T  24260635 aagagttgagggttagagatttgcaatttttatctgtttgcaacagagcaagttacct-attttggttgcagaaa 24260708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 15375859 - 15375823
Alignment:
Q  481 agattgcaatttttatttgtttgcaacatagcaagtt 517  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15375859 agattgcaatttttatttgtttgcaacagagcaagtt 15375823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 417
Target Start/End: Complemental strand, 15375979 - 15375909
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    |||||||| ||||| |||||||| |||||||||| |||||| ||||   || |||||||| |||||||||||||    
T  15375979 aagtgtaccaaatcgtttaccaaataataaaatgataagtagagta---tcctatccacagggattgtcgtttc 15375909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 24167688 - 24167602
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||||||||||||| |||||| |||||||||||||||| |  |||||| ||   |||| |||  ||||||||||||||||| || |||||    
T  24167688 attaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagag---tatcatatatacatggattgtcgtttcttccaaaca 24167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 20419950 - 20419988
Alignment:
Q  336 cattaggtaagtgtactaaatcatttaccaagtaataaa 374  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  20419950 cattaggtaagtgtaccaaatcgtttaccaagtaataaa 20419988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 418
Target Start/End: Complemental strand, 23380360 - 23380283
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||| |||||||| ||||  |||||||||||||||| || |||||||   |||||||||| || |||||||||| |||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaa---actatcgtattcatatggattgtcatttca 23380283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 19086283 - 19086207
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 416  Q
    ||||| ||||||||| ||||| |||||||||||||||| || |||||| |||| ||   |||||||||| ||||| ||||    
T  19086283 attagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatta---tatccacatgaattgttgttt 19086207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 17315182 - 17315127
Alignment:
Q  359 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 417  Q
    |||| ||||||||||| || |||||||||||   |||||||||||||||||||| ||||    
T  17315182 tttatcaagtaataaagtgataagtaaagta---tcgtatccacatggattgtcctttc 17315127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 26121438 - 26121386
Alignment:
Q  326 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgt 378  Q
    |||||||||  |||||| |||||||| ||||| |||| |||||||||||||||    
T  26121438 atgatggtcggattaggcaagtgtaccaaatcgtttagcaagtaataaaatgt 26121386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 114589 - 114710
Alignment:
Q  446 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaac 545  Q
    |||||| ||||||||||| |||||  ||  ||||||||||| ||||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||||    
T  114589 agttgatgatataaaataaaagagacaatggttagagattgtaatttttatctgtttgcaacagaccaaattacctgtttttggttgcagaaaaggaaac 114688  T
Q  546 atcgtttaggactttttgaatc 567  Q
    | || |||||||| ||||||||    
T  114689 aacggttaggactctttgaatc 114710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 401 - 567
Target Start/End: Complemental strand, 320 - 151
Alignment:
Q  401 acatggattgtcgtttcatctaaacagttcgtgttatttatttaaa---gttgacgatataaaatataagagttaagagttagagattgcaatttttatt 497  Q
    |||| ||||||||||||||| | ||| || |||||| |||||| ||   ||| ||| ||||||||| ||||  |||  |||||||||||||||||||||     
T  320 acatcgattgtcgtttcatccatacaatttgtgttacttattttaattagttaacggtataaaataaaagaaataatggttagagattgcaatttttatc 221  T
Q  498 tgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatc 567  Q
    ||||||||||| | ||| |||   ||||||||||||||||||||||||| || |||||||| ||||||||    
T  220 tgtttgcaacaaaccaaattatcggtttttggttgcagaaaaggaaacaacggttaggactctttgaatc 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 5759 - 5641
Alignment:
Q  446 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaac 545  Q
    |||||| ||||||||||| |||||  ||   |||||||||||||||||||| ||||||||| | | ||| |||| |||||||||||| ||||||||||||    
T  5759 agttgatgatataaaataaaagagacaa---ttagagattgcaatttttatctgtttgcaatagaccaaattacctgtttttggttgtagaaaaggaaac 5663  T
Q  546 atcgtttaggactttttgaatc 567  Q
    | || |||||| | ||||||||    
T  5662 aacggttaggattctttgaatc 5641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 538
Target Start/End: Original strand, 35587 - 35730
Alignment:
Q  395 gtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgat-ataaaatataagagttaa-gagttagagatt-gcaatt 491  Q
    ||||||||||||||| ||||||| || ||||| ||||  ||| |||||| |||||   ||| |||||||| ||||||||| | |||||||||| ||||||    
T  35587 gtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagttt--gatgataaaataaaagagttaaagggttagagatttgcaatt 35684  T
Q  492 tttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||||| ||||||| |||||||||| || |||||||||||||||    
T  35685 tttatttgtctgcaacaaagcaagttacctg-ttttggttgcagaaa 35730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 525
Target Start/End: Original strand, 2372 - 2548
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||| |||||||  | |||||| ||||   |||||||||||||||||| | |||| || ||||| || | |||| ||||||    
T  2372 aagtgtaccaaatcgtttaccaaataataaagggataagtagagta---tcgtatccacatggattgacatttcttccaaacaattagcgttaattattt 2468  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
      | ||||| || ||||||| |||||| ||| ||||||||||| ||  ||||| ||||||||||| || ||||||| |||||    
T  2469 tgatttgacaatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttacctgttt 2548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 525
Target Start/End: Original strand, 2403 - 2579
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| ||||| |||||||| |||||||  | |||||| ||||   |||||||||||||||||| | |||| || ||||| || | |||| ||||||    
T  2403 aagtgtaccaaatcgtttaccaaataataaagggataagtagagta---tcgtatccacatggattgacatttcttccaaacaattagcgttaattattt 2499  T
Q  444 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 525  Q
      | ||||| || ||||||| |||||| ||| ||||||||||| ||  ||||| ||||||||||| || ||||||| |||||    
T  2500 tgatttgacaatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttacctgttt 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 540
Target Start/End: Original strand, 69915 - 70107
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||| |||||||||||||||||||||| ||  ||||||||   |||||||| |||| ||||||||||||| || ||||| |||  |||| ||||||    
T  69915 aagtgtaccaaatcatttaccaagtaataaagtgacaagtaaag---tatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttattt 70011  T
Q  444 ---aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaa 539  Q
        | ||||| ||||||||| ||||  ||||      | || ||||||||||||||||||||||| | |||||| |||| |||||||||||| ||||||    
T  70012 ttgtatgttgatgatataaaagataaaggtta-----gaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaa 70106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 540
Target Start/End: Complemental strand, 919 - 726
Alignment:
Q  344 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 443  Q
    |||||||||||||| || ||||||||||||| || |||||| ||||   |||||||||    |||||||||||| || ||||| | |  |||| ||||||    
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagta---tcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattt 824  T
Q  444 ----aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaa 538  Q
        ||  |||||||||||||| ||||| ||| |||     |||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||||||    
T  823 ttataagtttgacgatataaaagataagggtttagaa----agattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaa 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 4587 - 4484
Alignment:
Q  337 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 436  Q
    |||||| || |||||  |||| |||||||||||| |||||| |||| | ||||   |||||||||||||||||||| |||| | |||||| |||||||||    
T  4587 attaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagta---tcgtatccacatggattgtcatttcgtttaaacaattcgtgtta 4491  T
Q  437 tttattt 443  Q
     ||||||    
T  4490 cttattt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 6272 - 6373
Alignment:
Q  327 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 426  Q
    |||| |||| |||||| |||||||  ||||| ||||| |||||||||| |  |||||||||||   ||||||||||||||||||| ||||| || |||||    
T  6272 tgatagtcatattaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagta---tcgtatccacatggattgttgtttcgtccaaaca 6368  T
Q  427 gttcg 431  Q
     ||||    
T  6369 attcg 6373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 572
Target Start/End: Original strand, 3283 - 3371
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccc 572  Q
    |||||||||||||||||||| || | ||||| |||| |||||||||||  ||||||| || || || ||| || |||||||||| ||||    
T  3283 ttgcaatttttatttgtttgtaatagagcaatttacctgtttttggttatagaaaagtaagcagcggttatgattttttgaatcccccc 3371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 15785 - 15841
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 540  Q
    |||||||||||||   ||||||||| |||||||||| ||||||||||||| ||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagttacctgtttttggttgcggaaaag 15841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 181666 - 181612
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 538  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||| | ||||||||    
T  181666 ttgcaatatttatttgtttgcaacagagcaagttgcctgttttttggtgcagaaa 181612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 12105 - 12182
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 418  Q
    ||||| |||||||| ||||  |||||||||||||||| || |||||||   |||||||||| || |||||||||| |||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaa---actatcgtattcatatggattgtcatttca 12182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 6066 - 6009
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||| | ||| || ||||||||||||||||| |||||||    
T  6066 ttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaag 6009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 72148 - 72205
Alignment:
Q  484 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 540  Q
    ||||||||||||| ||||||||||| |||||| |||| | ||||| ||||||||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaag 72205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 7872 - 7908
Alignment:
Q  338 ttaggtaagtgtactaaatcatttaccaagtaataaa 374  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  7872 ttaggtaagtgtactcaatcgtttaccaagtaataaa 7908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 89833 - 89726
Alignment:
Q  465 aagagttaagagttagagattgc-aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttg 563  Q
    |||||||||| ||||||||||   ||||| ||| ||||||||||  | |||||||| |||||| ||||||||||||  || || || |||||||| |||     
T  89833 aagagttaagggttagagatttttaatttctatctgtttgcaaccgaacaagttacctgtttt-ggttgcagaaaaataagcagcggttaggactcttta 89735  T
Q  564 aatcacccc 572  Q
    |||||||||    
T  89734 aatcacccc 89726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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