View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18875_high_15 (Length: 250)
Name: NF18875_high_15
Description: NF18875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18875_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 36544602 - 36544367
Alignment:
| Q |
8 |
ttttttcattttgtgaacaacattgcaagtttggaactaaaaagaaattaaataaaagcaatcagtcattttaaatactgaaaaatgatattgaagcgta |
107 |
Q |
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| T |
36544602 |
ttttttcattttgtgaacaacattgcaagtttggaactaaaa-gaaactatataaaagcaatcagtcattttaaatactgaaaaatgatattgaagcgta |
36544504 |
T |
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| Q |
108 |
tatgattgtgaaataaaattttgaactggatgtgatggtgagccatttatttttgtgaacaatatcattttgtttatcaaatagatgtaggattattaat |
207 |
Q |
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| T |
36544503 |
tatgattgtgaaataaaattttgaactggatgtgatggtgagccatttaattttgtgaacaatatcattttgtttatcaaatagatgtaggattattaat |
36544404 |
T |
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| Q |
208 |
ttgtgtttcatgtgattgtatttgtgagtataattta |
244 |
Q |
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| T |
36544403 |
ttgtgtttcctgtgattgtatttgtgagtatagttta |
36544367 |
T |
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