View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18875_low_2 (Length: 598)

Name: NF18875_low_2
Description: NF18875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18875_low_2
NF18875_low_2
[»] chr1 (42 HSPs)
chr1 (23-588)||(25289853-25290422)
chr1 (132-196)||(42304220-42304284)
chr1 (243-298)||(18944623-18944678)
chr1 (132-198)||(35117778-35117845)
chr1 (126-196)||(18741964-18742034)
chr1 (124-193)||(50606487-50606556)
chr1 (124-196)||(20004095-20004167)
chr1 (124-196)||(27201730-27201802)
chr1 (247-298)||(8197023-8197074)
chr1 (247-298)||(14617018-14617069)
chr1 (247-298)||(20004219-20004270)
chr1 (247-298)||(34725223-34725274)
chr1 (124-195)||(35005207-35005278)
chr1 (243-298)||(45812658-45812713)
chr1 (247-298)||(46248080-46248131)
chr1 (247-298)||(46991784-46991835)
chr1 (248-298)||(22930195-22930245)
chr1 (124-182)||(45402191-45402249)
chr1 (124-209)||(10668295-10668380)
chr1 (253-298)||(40424722-40424767)
chr1 (124-181)||(46991900-46991957)
chr1 (243-292)||(52910204-52910252)
chr1 (124-176)||(1517316-1517368)
chr1 (135-183)||(6358216-6358264)
chr1 (248-296)||(18742089-18742137)
chr1 (132-196)||(19932766-19932830)
chr1 (128-176)||(33594140-33594188)
chr1 (243-298)||(27474261-27474316)
chr1 (247-298)||(32632683-32632734)
chr1 (247-298)||(34714603-34714654)
chr1 (243-298)||(41319929-41319984)
chr1 (247-298)||(47214491-47214542)
chr1 (124-182)||(4349733-4349791)
chr1 (260-298)||(10668200-10668238)
chr1 (248-298)||(19932880-19932930)
chr1 (124-196)||(18944726-18944799)
chr1 (250-298)||(10163739-10163787)
chr1 (132-207)||(23371195-23371267)
chr1 (243-299)||(23768443-23768499)
chr1 (132-196)||(30395739-30395803)
chr1 (247-291)||(33222971-33223015)
chr1 (260-296)||(45402077-45402113)
[»] chr6 (19 HSPs)
chr6 (124-196)||(12885971-12886043)
chr6 (247-298)||(3815204-3815255)
chr6 (124-196)||(29355860-29355932)
chr6 (247-298)||(1346921-1346972)
chr6 (247-298)||(1354882-1354933)
chr6 (243-298)||(33922951-33923006)
chr6 (245-299)||(32728281-32728335)
chr6 (263-298)||(1941812-1941847)
chr6 (247-298)||(8409200-8409251)
chr6 (247-286)||(8417441-8417480)
chr6 (243-298)||(9161080-9161135)
chr6 (243-297)||(20400625-20400679)
chr6 (124-196)||(12221919-12221992)
chr6 (248-297)||(24734591-24734640)
chr6 (247-299)||(12063423-12063475)
chr6 (247-291)||(12222044-12222088)
chr6 (124-192)||(12892071-12892139)
chr6 (247-295)||(14975207-14975255)
chr6 (132-172)||(33922870-33922910)
[»] chr3 (31 HSPs)
chr3 (124-196)||(29366725-29366797)
chr3 (124-196)||(13628795-13628867)
chr3 (124-196)||(45786219-45786291)
chr3 (247-298)||(8247816-8247867)
chr3 (247-298)||(10870078-10870129)
chr3 (118-196)||(353348-353426)
chr3 (124-198)||(13730607-13730681)
chr3 (247-298)||(7697012-7697063)
chr3 (247-298)||(13730731-13730782)
chr3 (247-298)||(16735420-16735471)
chr3 (244-295)||(25517297-25517348)
chr3 (243-298)||(39203495-39203550)
chr3 (247-298)||(46421164-46421215)
chr3 (247-298)||(52926337-52926388)
chr3 (124-186)||(516502-516564)
chr3 (132-182)||(6411835-6411885)
chr3 (248-298)||(9607182-9607232)
chr3 (124-182)||(15797314-15797372)
chr3 (243-285)||(26869699-26869741)
chr3 (124-182)||(40272817-40272875)
chr3 (260-298)||(40272952-40272990)
chr3 (124-182)||(54484785-54484843)
chr3 (124-193)||(5173724-5173793)
chr3 (124-196)||(8247691-8247764)
chr3 (124-196)||(25517175-25517245)
chr3 (158-195)||(45139515-45139552)
chr3 (132-196)||(829455-829518)
chr3 (132-196)||(10795436-10795500)
chr3 (246-298)||(12914161-12914213)
chr3 (132-196)||(25944551-25944614)
chr3 (124-196)||(49013478-49013550)
[»] chr4 (39 HSPs)
chr4 (243-298)||(47528651-47528706)
chr4 (124-196)||(23501847-23501919)
chr4 (247-298)||(6430752-6430803)
chr4 (243-298)||(13256520-13256575)
chr4 (247-298)||(17315425-17315476)
chr4 (247-298)||(23501750-23501801)
chr4 (135-198)||(30581481-30581543)
chr4 (243-298)||(37494808-37494863)
chr4 (247-298)||(48598950-48599001)
chr4 (124-182)||(9832318-9832376)
chr4 (247-297)||(14590795-14590845)
chr4 (248-298)||(20224941-20224991)
chr4 (124-182)||(47444029-47444087)
chr4 (253-298)||(10660361-10660406)
chr4 (253-298)||(10874506-10874551)
chr4 (247-299)||(16911518-16911570)
chr4 (124-196)||(20225134-20225206)
chr4 (124-196)||(20405147-20405219)
chr4 (124-196)||(20639663-20639734)
chr4 (243-295)||(21646924-21646976)
chr4 (124-196)||(21647024-21647096)
chr4 (132-196)||(30352593-30352657)
chr4 (124-184)||(44363135-44363195)
chr4 (247-298)||(5306790-5306841)
chr4 (247-298)||(5648216-5648267)
chr4 (247-298)||(11054273-11054324)
chr4 (260-299)||(18969697-18969736)
chr4 (247-298)||(30639337-30639388)
chr4 (124-195)||(33836492-33836563)
chr4 (124-182)||(5648330-5648388)
chr4 (124-182)||(30639451-30639509)
chr4 (124-181)||(25388249-25388306)
chr4 (124-181)||(38755913-38755970)
chr4 (124-196)||(16408606-16408678)
chr4 (155-195)||(16494278-16494318)
chr4 (124-176)||(32484311-32484363)
chr4 (128-176)||(41018803-41018851)
chr4 (132-192)||(54730314-54730374)
chr4 (246-294)||(54966983-54967030)
[»] chr8 (25 HSPs)
chr8 (130-198)||(44781515-44781583)
chr8 (125-196)||(16013514-16013585)
chr8 (124-196)||(26954193-26954265)
chr8 (247-298)||(12670375-12670426)
chr8 (247-298)||(24245408-24245459)
chr8 (247-298)||(28817753-28817804)
chr8 (247-298)||(30454222-30454273)
chr8 (247-295)||(20869623-20869671)
chr8 (124-196)||(39460999-39461071)
chr8 (247-298)||(11748256-11748307)
chr8 (125-196)||(20284075-20284146)
chr8 (125-196)||(21070703-21070774)
chr8 (247-298)||(35261636-35261687)
chr8 (247-298)||(39461123-39461174)
chr8 (132-182)||(2626594-2626644)
chr8 (126-196)||(7136534-7136604)
chr8 (260-298)||(7136669-7136707)
chr8 (247-297)||(20284200-20284250)
chr8 (247-297)||(21070829-21070879)
chr8 (124-182)||(26102589-26102647)
chr8 (159-196)||(43942384-43942421)
chr8 (124-196)||(6760882-6760954)
chr8 (132-196)||(17250888-17250952)
chr8 (124-196)||(20869983-20870055)
chr8 (246-298)||(31454145-31454197)
[»] chr2 (24 HSPs)
chr2 (124-196)||(10543758-10543830)
chr2 (248-298)||(23397723-23397773)
chr2 (247-307)||(9671128-9671189)
chr2 (124-193)||(23488544-23488613)
chr2 (124-196)||(14530378-14530450)
chr2 (247-298)||(12024045-12024096)
chr2 (247-298)||(14530275-14530326)
chr2 (247-298)||(24200752-24200803)
chr2 (260-298)||(17705452-17705490)
chr2 (241-298)||(14544020-14544077)
chr2 (124-196)||(24200628-24200700)
chr2 (247-298)||(8455443-8455494)
chr2 (247-298)||(10543655-10543706)
chr2 (247-298)||(11514393-11514444)
chr2 (247-298)||(21779386-21779437)
chr2 (247-298)||(25079845-25079896)
chr2 (248-295)||(27573581-27573628)
chr2 (136-195)||(31158456-31158515)
chr2 (255-298)||(39189556-39189599)
chr2 (124-182)||(8455321-8455379)
chr2 (124-182)||(9671251-9671309)
chr2 (124-182)||(10546235-10546293)
chr2 (131-176)||(24890489-24890534)
chr2 (124-181)||(25079722-25079779)
[»] scaffold0187 (4 HSPs)
scaffold0187 (243-298)||(8902-8957)
scaffold0187 (243-298)||(19230-19285)
scaffold0187 (247-299)||(10175-10227)
scaffold0187 (247-299)||(20503-20555)
[»] chr7 (29 HSPs)
chr7 (243-298)||(32758218-32758273)
chr7 (247-298)||(47077980-47078031)
chr7 (247-298)||(48735248-48735299)
chr7 (124-198)||(42805582-42805656)
chr7 (248-297)||(14732950-14732999)
chr7 (243-292)||(28362268-28362316)
chr7 (124-196)||(3469180-3469252)
chr7 (243-294)||(11617711-11617762)
chr7 (247-298)||(21172134-21172185)
chr7 (149-196)||(33500573-33500620)
chr7 (126-181)||(35334823-35334878)
chr7 (247-298)||(42495962-42496013)
chr7 (247-298)||(42798626-42798677)
chr7 (260-298)||(2541160-2541198)
chr7 (248-298)||(5180285-5180335)
chr7 (124-182)||(10693078-10693136)
chr7 (124-182)||(11617593-11617651)
chr7 (260-298)||(18326991-18327029)
chr7 (265-299)||(35787383-35787417)
chr7 (248-298)||(43557429-43557479)
chr7 (132-182)||(45811919-45811969)
chr7 (260-298)||(46354151-46354189)
chr7 (124-181)||(18512458-18512515)
chr7 (253-298)||(22699103-22699148)
chr7 (246-299)||(29140486-29140539)
chr7 (247-295)||(35334941-35334989)
chr7 (132-192)||(39123957-39124017)
chr7 (247-295)||(40463837-40463885)
chr7 (124-196)||(47716519-47716591)
[»] chr5 (24 HSPs)
chr5 (247-298)||(37024681-37024732)
chr5 (124-196)||(38879641-38879713)
chr5 (247-299)||(43334158-43334210)
chr5 (132-195)||(12006341-12006404)
chr5 (247-298)||(38879538-38879589)
chr5 (247-301)||(4619233-4619287)
chr5 (124-182)||(24448962-24449020)
chr5 (243-301)||(27328706-27328764)
chr5 (253-298)||(1565388-1565433)
chr5 (124-196)||(20135664-20135736)
chr5 (260-296)||(31299591-31299627)
chr5 (124-196)||(43334263-43334334)
chr5 (247-298)||(24448847-24448898)
chr5 (247-298)||(35710270-35710321)
chr5 (247-298)||(41014276-41014327)
chr5 (260-298)||(2838735-2838773)
chr5 (124-182)||(16957386-16957444)
chr5 (247-301)||(22861793-22861847)
chr5 (124-196)||(4619109-4619181)
chr5 (124-176)||(7368474-7368526)
chr5 (247-295)||(8170109-8170157)
chr5 (124-196)||(13801772-13801844)
chr5 (124-176)||(30877569-30877621)
chr5 (124-176)||(39801594-39801646)
[»] scaffold0049 (1 HSPs)
scaffold0049 (124-196)||(59037-59109)
[»] scaffold0258 (2 HSPs)
scaffold0258 (247-298)||(13150-13201)
scaffold0258 (124-181)||(13029-13086)
[»] scaffold0168 (1 HSPs)
scaffold0168 (247-298)||(30536-30587)
[»] scaffold0311 (2 HSPs)
scaffold0311 (124-182)||(10882-10940)
scaffold0311 (247-292)||(10773-10818)
[»] scaffold0057 (2 HSPs)
scaffold0057 (248-298)||(24895-24945)
scaffold0057 (124-182)||(46903-46961)
[»] scaffold0005 (1 HSPs)
scaffold0005 (247-297)||(226533-226583)
[»] scaffold0024 (1 HSPs)
scaffold0024 (247-298)||(83832-83883)


Alignment Details
Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 23 - 588
Target Start/End: Complemental strand, 25290422 - 25289853
Alignment:
Q  23 gacacatacatcggatatgatactgtaattcgacgcctgtaataacatgagnnnnnnnnttaattgaaagtaatcattgaatgtgttagtgtcgtattag 122  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||        ||||||||| |||||||||||||||||||||||||||||||    
T  25290422 gacacatacatcggatatgatactggaattcgacgccgataataacatgagaaaaaaaattaattgaacgtaatcattgaatgtgttagtgtcgtattag 25290323  T
Q  123 tgcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacacgaccttgccttaccctgnnnnnnn 222  Q
    ||||||||||||||    |||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||           
T  25290322 tgcaacccagtgca----agttcctacatatgcagagtctgggaaggggtcctatcatttttggtgtattgtacacaaccttgccttaccctgtttttt- 25290228  T
Q  223 acataagagt---tgtttccaggacctg------tgacatttcagccacatgacaacaactttacctgttgcaccaaggttacccttcgaattagtttct 313  Q
    ||| |||||    |||||||| ||| ||      |||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  25290227 acacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttacccttcgtattagtttct 25290128  T
Q  314 gacactggcacatgaaaataaatttcttgaatgtaatcattgaatgtgttggtgtcgtattagttgctgacactgacacatgtcagacaccgaaacatct 413  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  25290127 gacactggcacatgaaaataaatttcttgaatgtaatcaatgaatgtgttagtgtcgtattagttgctgacactgacacatgtcatacacccaaacatct 25290028  T
Q  414 tctatcagaggtgtcagttatacgaaggtccttgattgtccgatgtttggccaagaaattaattgaatgtaaattacatatgttattgcgtgctggtgtc 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25290027 tctatcagaggtgtcagttatacgaaggtccttgattgtccgatgtttggctaagaaattaattgaatgtaaattacatatgttattgcgttctggtgtc 25289928  T
Q  514 tgacactgacacatgtcgaacaccaaagatgtctttgatcagagttggccaagaggtaaataacacctgcctatg 588  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25289927 tgacactgacacatgtcgaacaccaaagatgtctttgatcagagttggccaagaggtaaataacacctgcctatg 25289853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 42304220 - 42304284
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||| ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  42304220 gtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtac 42304284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 18944678 - 18944623
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  18944678 acctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 18944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 35117778 - 35117845
Alignment:
Q  132 gtgcactaaagttcctacataa-gcagggtctgggaaggggtcccatcattttttgtgtattgtacac 198  Q
    ||||||||||| |||| ||| | |||||||| |||||||||||||||||||||| |||||||||||||    
T  35117778 gtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacac 35117845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 18741964 - 18742034
Alignment:
Q  126 aacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||| ||||||||||| ||   |||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  18741964 aacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtac 18742034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 50606556 - 50606487
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattg 193  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| ||||||| ||||||||    
T  50606556 gcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtattg 50606487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 20004095 - 20004167
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| || |||||||||||||||||||| |||| || |||||||||||    
T  20004095 gcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtac 20004167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 27201802 - 27201730
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||||| |||||||||| |||  |||| ||| |||| |||||||||||||| ||||||| |||||||||||    
T  27201802 gcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtac 27201730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 8197074 - 8197023
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||| ||| ||||||||||||||||||    
T  8197074 gtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttaccc 8197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 14617069 - 14617018
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  14617069 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 14617018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 20004219 - 20004270
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||||||||||||||||    
T  20004219 gtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 20004270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 34725223 - 34725274
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  34725223 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 34725274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 35005278 - 35005207
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgta 195  Q
    ||||||| |||||||||||  ||  |||| |||||||| |||||||||||||| ||||||| ||||||||||    
T  35005278 gcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgta 35005207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 45812658 - 45812713
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  45812658 acctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 45812713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 46248080 - 46248131
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||| |||||||||||||||||||| ||||  ||||||||||||    
T  46248080 gtgacatttcagtcacatgacaacaactttaccagttgagccaaggttaccc 46248131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 46991835 - 46991784
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||||||||||||||||    
T  46991835 gtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 46991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 22930195 - 22930245
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  22930195 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 22930245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 45402249 - 45402191
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| ||||||||||||||||||||||| |||||    
T  45402249 gcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 45402191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 10668380 - 10668295
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacacgaccttgcctt 209  Q
    ||||||| ||||||||||| |||  |||| |||||| | |||||||||||||| |||| || ||||||||||| | ||||| ||||    
T  10668380 gcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttacctt 10668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 40424767 - 40424722
Alignment:
Q  253 tttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  40424767 tttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 40424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 46991957 - 46991900
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    ||||||| ||||||||||| ||| ||||| |||||||| |||||||||||||| ||||    
T  46991957 gcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccatt 46991900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 52910252 - 52910204
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaagg 292  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  52910252 acctgtgacctttcagtcacatgacaacaactttacc-gttgcaccaagg 52910204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 1517316 - 1517368
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    ||||||| ||||||||||| |||| |||| |||||||||| ||||||||||||    
T  1517316 gcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtccca 1517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 6358264 - 6358216
Alignment:
Q  135 cactaaagttcctacataagcagggtctgggaaggggtcccatcatttt 183  Q
    |||||||| |||| |||| ||||||||||||||||||||||| ||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccatttt 6358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 18742089 - 18742137
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttac 296  Q
    |||| |||||| |||||||||||||||||||| ||||| ||||||||||    
T  18742089 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 19932766 - 19932830
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||| | || | |||| |||||||| |||||||||||||| ||||||| |||||||||||    
T  19932766 gtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtac 19932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 33594140 - 33594188
Alignment:
Q  128 cccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||||||    
T  33594140 cccagtgcactaaagctcccgcatacgcagggtctgggaaggggtccca 33594188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 27474316 - 27474261
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||||| ||||  | ||||||||||    
T  27474316 acctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttaccc 27474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 32632683 - 32632734
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| || ||||||||||||||||| ||||| ||||||||||||    
T  32632683 gtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 32632734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 34714654 - 34714603
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||  |||||||||||||||||||| ||||| ||||||||||||    
T  34714654 gtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttaccc 34714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 41319929 - 41319984
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||||| ||||   |||||||||||    
T  41319929 acctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttaccc 41319984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 47214542 - 47214491
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||    
T  47214542 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 47214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 4349791 - 4349733
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  4349791 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 4349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 10668238 - 10668200
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  10668238 cacatgacaacaactttaccagttgcgccaaggttaccc 10668200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 19932880 - 19932930
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| ||||| ||||||| ||||    
T  19932880 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaaccc 19932930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 18944799 - 18944726
Alignment:
Q  124 gcaacccagtgcactaaa-gttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| |||||||||| | |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  18944799 gcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtac 18944726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 10163787 - 10163739
Alignment:
Q  250 acatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| ||||||||||||||||||||| | ||||| |||| |||||||    
T  10163787 acattttagccacatgacaacaactttatcagttgcgccaatgttaccc 10163739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 23371267 - 23371195
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacacgaccttgcc 207  Q
    ||||||||||| | | ||||| ||||||||||| ||||||||||| |||||   ||||||||||||| ||||||||    
T  23371267 gtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttg--gtgtattgtacacaaccttgcc 23371195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 23768443 - 23768499
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||||||| || ||| |||||||||||||||||||| |||||  | ||||||||||    
T  23768443 acctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccct 23768499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 30395739 - 30395803
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  30395739 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 30395803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 33223015 - 33222971
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaag 291  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||    
T  33223015 gtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 45402113 - 45402077
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttac 296  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  45402113 cacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 12886043 - 12885971
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  12886043 gcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtac 12885971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 3815204 - 3815255
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  3815204 gtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 3815255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 29355860 - 29355932
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  29355860 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 29355932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 1346972 - 1346921
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  1346972 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 1354882 - 1354933
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  1354882 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1354933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 33922951 - 33923006
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| || ||||||||||||||||| ||||| ||||||||||||    
T  33922951 acctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttaccc 33923006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 32728281 - 32728335
Alignment:
Q  245 ctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||||| |||||| |||||||||||||||||||  ||| |||||||||||||||    
T  32728281 ctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttaccct 32728335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 1941847 - 1941812
Alignment:
Q  263 atgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||||||||||| ||||||||||||||||||    
T  1941847 atgacaacaactttaccagttgcaccaaggttaccc 1941812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 8409251 - 8409200
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| ||||| |||||||||||||| ||||| ||||||||||||    
T  8409251 gtgacctttcagtcacattacaacaactttaccagttgcgccaaggttaccc 8409200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 286
Target Start/End: Complemental strand, 8417480 - 8417441
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgca 286  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  8417480 gtgacatttcagtcacatgacaacaactttaccagttgca 8417441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 9161135 - 9161080
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| ||||||||||||||||||||  ||||  |||||||||||    
T  9161135 acctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttaccc 9161080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 20400679 - 20400625
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    ||||||||| |||||| ||||||||||||||| ||||  |||| |||||||||||    
T  20400679 acctgtgacctttcagtcacatgacaacaactataccaattgcgccaaggttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 12221919 - 12221992
Alignment:
Q  124 gcaacccagtgcactaaa-gttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| |||||||||| | |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  12221919 gcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 12221992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 24734640 - 24734591
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    |||| |||||| |||||||||||||||||||| ||||| |||| ||||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 12063475 - 12063423
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||| |||||| | ||||| |||||||||| | |||||||||||||||||||    
T  12063475 gtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccct 12063423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 12222044 - 12222088
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaag 291  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||    
T  12222044 gtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 12892139 - 12892071
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtatt 192  Q
    ||||||| ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||    
T  12892139 gcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 12892071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 14975207 - 14975255
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    ||||| || ||| |||||||||||||||||||| ||||| |||||||||    
T  14975207 gtgaccttccagtcacatgacaacaactttaccggttgcgccaaggtta 14975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 33922870 - 33922910
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggt 172  Q
    ||||||||||| ||| |||||||||||||| ||||||||||    
T  33922870 gtgcactaaagctccaacataagcagggtccgggaaggggt 33922910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 29366725 - 29366797
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||||||||||| ||| ||||| |||||||| |||||||||||||| |||| || |||||||||||    
T  29366725 gcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 29366797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 13628795 - 13628867
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  13628795 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 13628867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 45786219 - 45786291
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||  |||||||| |||||||||||||| ||||||| |||||||||||    
T  45786219 gcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtac 45786291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 8247816 - 8247867
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  8247816 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 8247867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 10870078 - 10870129
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  10870078 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 353348 - 353426
Alignment:
Q  118 attagtgcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||| ||||||| ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  353348 attagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 353426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 13730607 - 13730681
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacac 198  Q
    ||||||| ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||||    
T  13730607 gcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacac 13730681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 7697012 - 7697063
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| ||| || |||||||||||||||||||| ||||| ||||||||||||    
T  7697012 gtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttaccc 7697063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 13730731 - 13730782
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  13730731 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 13730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 16735471 - 16735420
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  16735471 gtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 16735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 25517297 - 25517348
Alignment:
Q  244 cctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    |||||||| || ||| |||||||||||||||||||| ||||| |||||||||    
T  25517297 cctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 25517348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 39203550 - 39203495
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||||  ||||  ||||||||||||    
T  39203550 acctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttaccc 39203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 46421164 - 46421215
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| ||| || |||||||||||||||||||| ||||| ||||||||||||    
T  46421164 gtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 46421215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 52926337 - 52926388
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  52926337 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 52926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 516564 - 516502
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttg 186  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||  |||||||||    
T  516564 gcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttg 516502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 6411835 - 6411885
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||||||| |||  |||| ||| |||||||||||||||||||||||||    
T  6411835 gtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcattt 6411885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 9607232 - 9607182
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||  ||||| ||||||||||||    
T  9607232 tgacctttcagtcacatgacaacaactttacaagttgcgccaaggttaccc 9607182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 15797372 - 15797314
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| |||||||| || ||| ||||| |||||||| |||||||||||||| |||||    
T  15797372 gcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccattt 15797314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 26869741 - 26869699
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgc 285  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  26869741 acctgtgacctttcagtcacatgacaacaactttaccagttgc 26869699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 40272817 - 40272875
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  40272817 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 40272875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 40272952 - 40272990
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  40272952 cacatgacaacaactttaccagttgcgccaaggttaccc 40272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 54484843 - 54484785
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  54484843 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 54484785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 5173724 - 5173793
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattg 193  Q
    ||||||| ||||||||||| |||  |||| ||| |||| ||||||||| |||| ||||||| ||||||||    
T  5173724 gcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattg 5173793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 8247691 - 8247764
Alignment:
Q  124 gcaacccagtgcact-aaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||||||| |||| |||  |||| |||||||| ||||||| |||||| |||| || |||||||||||    
T  8247691 gcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtac 8247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 25517175 - 25517245
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| ||||| || |||||||||||||| ||  |||||||||||||||    
T  25517175 gcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccacca--ttttgtgtattgtac 25517245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 45139515 - 45139552
Alignment:
Q  158 ggtctgggaaggggtcccatcattttttgtgtattgta 195  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  45139515 ggtctgggaaggggtcccaccatttttggtgtattgta 45139552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 829455 - 829518
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||| |||| |||| |||||||  |||||||||||||| || |||| |||||||||||    
T  829455 gtgcactaaagctcctgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtac 829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 10795436 - 10795500
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||| |||  |||| ||||||||  ||||||||||||| ||||||| |||||||||||    
T  10795436 gtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtac 10795500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 12914161 - 12914213
Alignment:
Q  246 tgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| |||| | ||||| |||||||||||||| ||||| ||||||||||||    
T  12914161 tgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttaccc 12914213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 25944614 - 25944551
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||| |||||| ||| ||||| |||||||| |||||||||||||| || |||| |||||||||||    
T  25944614 gtgcgctaaagctcccacatacgcagggtcagggaaggggtcccacca-ttttggtgtattgtac 25944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 49013478 - 49013550
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  | || || ||||| |||||||||||||| |||| || |||||||||||    
T  49013478 gcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtac 49013550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 9e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 47528651 - 47528706
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  47528651 acctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 47528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 23501919 - 23501847
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  23501919 gcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtac 23501847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 6430752 - 6430803
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  6430752 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 6430803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 13256520 - 13256575
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||| || ||| |||||||||||||||||||| ||||||||||||||||||    
T  13256520 acctatgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 13256575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 17315425 - 17315476
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  17315425 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 23501801 - 23501750
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  23501801 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 23501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 30581481 - 30581543
Alignment:
Q  135 cactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacac 198  Q
    |||||||| ||||||||| |||||||| |||||||||||||| || |||| |||||||||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccacca-ttttggtgtattgtacac 30581543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 37494863 - 37494808
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| | |||| ||||||||||||| ||||||||||||||||||    
T  37494863 acctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttaccc 37494808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 48598950 - 48599001
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  48598950 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48599001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 9832318 - 9832376
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| |||||||| ||||||| |||| |||||||| |||||||||||||| |||||    
T  9832318 gcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccattt 9832376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 14590845 - 14590795
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||||||||    
T  14590845 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 20224991 - 20224941
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  20224991 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 20224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 47444087 - 47444029
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||||||||||| ||| |||| |||| |||||||| |||||||||||||| |||||    
T  47444087 gcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccattt 47444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 10660406 - 10660361
Alignment:
Q  253 tttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  10660406 tttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 10874551 - 10874506
Alignment:
Q  253 tttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  10874551 tttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 16911570 - 16911518
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||| ||| || |||||||||||||||||||| ||||| |||||||||||||    
T  16911570 gtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccct 16911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 20225206 - 20225134
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  20225206 gcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 20225134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 20405219 - 20405147
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||||| |||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  20405219 gcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtac 20405147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 20639663 - 20639734
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| || |||| |||||||||||    
T  20639663 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtattgtac 20639734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 21646976 - 21646924
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    ||||||||| || ||| |||||||||||||||||||| ||||| |||||||||    
T  21646976 acctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 21646924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 21647096 - 21647024
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| || |||||||||||||||||||| |||| || || ||||||||    
T  21647096 gcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtac 21647024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 30352593 - 30352657
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||| |||  |||| |||||||| | |||||||||||| ||||||| |||||||||||    
T  30352593 gtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtac 30352657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 44363135 - 44363195
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttt 184  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||||    
T  44363135 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttt 44363195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 5306790 - 5306841
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  5306790 gtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttaccc 5306841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 5648267 - 5648216
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  5648267 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 5648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 11054273 - 11054324
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||    
T  11054273 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 11054324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 18969736 - 18969697
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  18969736 cacatgacaacaactttaccagttgcgccaaggttaccct 18969697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 30639388 - 30639337
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  30639388 gtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttaccc 30639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 33836492 - 33836563
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgta 195  Q
    |||||||  |||||||||| |||  |||| |||||||| |||||||||||||| |||| || ||||||||||    
T  33836492 gcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 5648388 - 5648330
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||||||||||| ||| |||  |||| |||||||| |||||||||||||| |||||    
T  5648388 gcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 5648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 30639509 - 30639451
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||||||||||||||| |||  |||| |||||||| ||||||||||| || |||||    
T  30639509 gcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccattt 30639451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 25388306 - 25388249
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    ||||||| ||||||||||| || | |||| |||||||| |||||||||||||| ||||    
T  25388306 gcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 38755913 - 38755970
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| ||||    
T  38755913 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 16408606 - 16408678
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| || ||||| |||||||||| ||| |||| || |||||||||||    
T  16408606 gcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtac 16408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 16494318 - 16494278
Alignment:
Q  155 cagggtctgggaaggggtcccatcattttttgtgtattgta 195  Q
    ||||||||||||| |||||||| ||||||| ||||||||||    
T  16494318 cagggtctgggaaagggtcccaccatttttggtgtattgta 16494278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 32484363 - 32484311
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    ||||||| ||||||||||| |||  |||| |||||||| ||||||||||||||    
T  32484363 gcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtccca 32484311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 41018803 - 41018851
Alignment:
Q  128 cccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    |||||||||||||||  ||| |||| ||| |||||||||||||||||||    
T  41018803 cccagtgcactaaagcccctccatacgcaaggtctgggaaggggtccca 41018851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 54730374 - 54730314
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtatt 192  Q
    ||||||||||| |||  |||| |||||||| |||||||||| |||||||| || |||||||    
T  54730374 gtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtatt 54730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 54967030 - 54966983
Alignment:
Q  246 tgtgacatttcagccacatgacaacaactttacctgttgcaccaaggtt 294  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  54967030 tgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 54966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 44781515 - 44781583
Alignment:
Q  130 cagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacac 198  Q
    ||||||||||||| |||  |||| ||||||||||||| ||||||||| ||||||| |||||||||||||    
T  44781515 cagtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacac 44781583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 16013585 - 16013514
Alignment:
Q  125 caacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||| ||||||||||| |||  |||| |||||||||||||||||||| || ||||||| |||||||||||    
T  16013585 caacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtac 16013514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 26954265 - 26954193
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||||||||||| |||  |||| ||  ||||||||||||||||||| |||| || |||||||||||    
T  26954265 gcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtac 26954193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 12670375 - 12670426
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  12670375 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 24245459 - 24245408
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  24245459 gtgacctttcagtcacatgacaacaactttaccagttgccccaaggttaccc 24245408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 28817753 - 28817804
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||||||||||||||||    
T  28817753 gtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 28817804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 30454222 - 30454273
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  30454222 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30454273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 20869623 - 20869671
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||||||    
T  20869623 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 20869671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 39460999 - 39461071
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| ||||||||||| || |||| || |||||||||||    
T  39460999 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtac 39461071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 11748307 - 11748256
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||| ||||||||||||| || ||| |||||||||| |||||||    
T  11748307 gtgacatttcagtcacatgacaacaatttcaccagttgcaccaaagttaccc 11748256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 20284075 - 20284146
Alignment:
Q  125 caacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||| ||||||||||  |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 20284146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 21070703 - 21070774
Alignment:
Q  125 caacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||| ||||||||||  |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 21070774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 35261687 - 35261636
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  35261687 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 35261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 39461123 - 39461174
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| | |||||||||||||||||| ||||| ||||||||||||    
T  39461123 gtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttaccc 39461174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 2626644 - 2626594
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||| |||  |||| |||||||||||||||||||||||||||||    
T  2626644 gtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcattt 2626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 7136534 - 7136604
Alignment:
Q  126 aacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||| ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  7136534 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 7136604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 7136669 - 7136707
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  7136669 cacatgacaacaactttaccagttgcgccaaggttaccc 7136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 20284200 - 20284250
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    ||||| |||||| |||||||||||||||||||| |||||  ||||||||||    
T  20284200 gtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 21070829 - 21070879
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    ||||| |||||| |||||||||||||||||||| |||||  ||||||||||    
T  21070829 gtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 26102647 - 26102589
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| |||||||| || |||  ||||||||||||| |||||||||||||| |||||    
T  26102647 gcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 43942421 - 43942384
Alignment:
Q  159 gtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  43942421 gtctgggaaggggtcccaccatttttggtgtattgtac 43942384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 6760954 - 6760882
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| || ||||| | |||||||||||| |||| || |||||||||||    
T  6760954 gcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtac 6760882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 17250888 - 17250952
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||||| |||| |||| |||||||  ||||| |||||||| |||| || |||||||||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtac 17250952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 20870055 - 20869983
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| || |||||  ||||||||||||| |||| || |||||||||||    
T  20870055 gcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtac 20869983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 31454197 - 31454145
Alignment:
Q  246 tgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| ||||| |||||||||||||||| |||| ||||| ||||| ||||||    
T  31454197 tgtgacctttcaaccacatgacaacaactataccggttgcgccaagattaccc 31454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 10543830 - 10543758
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| ||||||| |||||||||||    
T  10543830 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtac 10543758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 23397773 - 23397723
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  23397773 tgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 23397723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 9671189 - 9671128
Alignment:
Q  247 gtgacatttc-agccacatgacaacaactttacctgttgcaccaaggttacccttcgaatta 307  Q
    |||||||||| || |||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  9671189 gtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttacccctcgaatta 9671128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 23488613 - 23488544
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattg 193  Q
    ||||||| ||||||||||| ||   |||| |||||||| |||||||||||||| ||||||||||||||||    
T  23488613 gcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattg 23488544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 14530450 - 14530378
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  14530450 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 14530378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 12024045 - 12024096
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  12024045 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 14530326 - 14530275
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  14530326 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 14530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 24200752 - 24200803
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| |||||| |||||||||||    
T  24200752 gtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttaccc 24200803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 17705490 - 17705452
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  17705490 cacatgacaacaactttaccagttgcaccaaggttaccc 17705452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 14544077 - 14544020
Alignment:
Q  241 ggacctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||| || |||||| ||||||||||||||||||||  |||| ||||||||||||    
T  14544077 ggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttaccc 14544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 24200628 - 24200700
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| ||  |||||  ||||||| |||||||| ||||| ||||||| |||||||||||    
T  24200628 gcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtac 24200700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 8455443 - 8455494
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  8455443 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 8455494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 10543706 - 10543655
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||| | ||||| ||||||||||||    
T  10543706 gtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 10543655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 11514444 - 11514393
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  11514444 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 11514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 21779386 - 21779437
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||| ||| ||||| ||||||||||||    
T  21779386 gtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttaccc 21779437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 25079845 - 25079896
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  25079845 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 25079896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 27573628 - 27573581
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||||    
T  27573628 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 31158456 - 31158515
Alignment:
Q  136 actaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgta 195  Q
    ||||||| |||  |||| ||||||||||||||||||||||| ||||||| || |||||||    
T  31158456 actaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgta 31158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 39189556 - 39189599
Alignment:
Q  255 tcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 39189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 8455321 - 8455379
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  8455321 gcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccattt 8455379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 9671309 - 9671251
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  9671309 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 9671251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 10546293 - 10546235
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  10546293 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 24890534 - 24890489
Alignment:
Q  131 agtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    |||||||||||| |||| |||| |||||||| ||||||||||||||    
T  24890534 agtgcactaaagctcctgcatacgcagggtccgggaaggggtccca 24890489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 25079722 - 25079779
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    ||||||| ||||||||||| || | |||| |||||||| |||||||||||||| ||||    
T  25079722 gcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccatt 25079779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 8957 - 8902
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||    
T  8957 acctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 19285 - 19230
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||    
T  19285 acctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 19230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 10175 - 10227
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||| |||||| |||||||||||||||||||| |||||  ||||||||||||    
T  10175 gtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccct 10227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 20503 - 20555
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||| |||||| |||||||||||||||||||| |||||  ||||||||||||    
T  20503 gtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccct 20555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 32758273 - 32758218
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  32758273 acctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 32758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 47077980 - 47078031
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  47077980 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 47078031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 48735248 - 48735299
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  48735248 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48735299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 42805656 - 42805582
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtacac 198  Q
    ||||||| ||||||||||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||||    
T  42805656 gcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacac 42805582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 14732950 - 14732999
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||||||    
T  14732950 tgacttttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 28362268 - 28362316
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaagg 292  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  28362268 acctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 3469180 - 3469252
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||||| ||||||||| |||  ||||  |||||||| ||||||||||||  ||||||| |||||||||||    
T  3469180 gcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtac 3469252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 11617711 - 11617762
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggtt 294  Q
    ||||||||| |||||| |||||||||||||||||||| ||||| || |||||    
T  11617711 acctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 21172134 - 21172185
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||    
T  21172134 gtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 21172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 33500620 - 33500573
Alignment:
Q  149 cataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||| |||||||| |||||||||||||| |||||||||||||| ||||    
T  33500620 catacgcagggtccgggaaggggtcccaccattttttgtgtatagtac 33500573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 35334823 - 35334878
Alignment:
Q  126 aacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    ||||| ||||||||||| |||| |||| |||||||| |||||||||||||| ||||    
T  35334823 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatt 35334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 42495962 - 42496013
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| || ||||||||||||||||| ||||| ||||||||||||    
T  42495962 gtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 42496013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 42798677 - 42798626
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  42798677 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 42798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 2541160 - 2541198
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2541160 cacatgacaacaactttaccagttgcgccaaggttaccc 2541198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 5180285 - 5180335
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| |||||  |||||||||||    
T  5180285 tgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 5180335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 10693078 - 10693136
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    |||||||||||||||| || |||  |||| |||||||| |||||||||||||| |||||    
T  10693078 gcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 10693136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 11617593 - 11617651
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||| |||| ||||||||  ||||||||||||| |||||    
T  11617593 gcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccattt 11617651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 18327029 - 18326991
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  18327029 cacatgacaacaactttaccagttgcgccaaggttaccc 18326991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 35787383 - 35787417
Alignment:
Q  265 gacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||||||||||||| |||||||||||||||||||    
T  35787383 gacaacaactttaccggttgcaccaaggttaccct 35787417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 43557479 - 43557429
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| |||||  |||||||||||    
T  43557479 tgacctttcagtcacatgacaacaactttaccagttgcggcaaggttaccc 43557429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 45811969 - 45811919
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||||||| |||| |||||||||||||||| ||||| ||||| |||||    
T  45811969 gtgcactaaagctcctgcataagcagggtctggaaagggatcccaccattt 45811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 46354189 - 46354151
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  46354189 cacatgacaacaactttaccagttgcgccaaggttaccc 46354151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 18512458 - 18512515
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    |||||||||||||| |||| |||  |||| |||||||| |||||||||||||| ||||    
T  18512458 gcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 22699103 - 22699148
Alignment:
Q  253 tttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| |||||||||||||||||||| |||||  |||||||||||    
T  22699103 tttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 22699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 29140486 - 29140539
Alignment:
Q  246 tgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    |||||| ||||||  ||||||||||||||||||| ||||| ||||| |||||||    
T  29140486 tgtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccct 29140539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 35334941 - 35334989
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    ||||| || ||| |||||||||||||||||||| ||||| |||||||||    
T  35334941 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 35334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 39124017 - 39123957
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtatt 192  Q
    |||||| |||| |||  |||| |||||||| |||||||||||||| ||||||| |||||||    
T  39124017 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 39123957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 40463885 - 40463837
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    ||||| || ||| |||||||||||||||||||| ||||| |||||||||    
T  40463885 gtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 47716591 - 47716519
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| |||||| |||| |||  |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  47716591 gcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 47716519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 37024681 - 37024732
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  37024681 gtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 37024732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 38879713 - 38879641
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||| || |||||||||||    
T  38879713 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtac 38879641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 43334210 - 43334158
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccct 299  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||    
T  43334210 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 43334158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 12006341 - 12006404
Alignment:
Q  132 gtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgta 195  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||| |||| || ||||||||||    
T  12006341 gtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgta 12006404  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 38879589 - 38879538
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  38879589 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 38879538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 4619233 - 4619287
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacccttc 301  Q
    ||||| || ||| |||||||||||||||||||| ||||| |||||||||||||||    
T  4619233 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccttc 4619287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 24449020 - 24448962
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||| |||| |||||||| |||||||||||||| |||||    
T  24449020 gcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattt 24448962  T

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Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 27328764 - 27328706
Alignment:
Q  243 acctgtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacccttc 301  Q
    ||||||||| |||||| ||||||||||||||||||||  ||||  ||||||||||||||    
T  27328764 acctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttacccttc 27328706  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 1565433 - 1565388
Alignment:
Q  253 tttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  1565433 tttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1565388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 20135736 - 20135664
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||| ||| |||| |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  20135736 gcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 20135664  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 31299627 - 31299591
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttac 296  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31299627 cacatgacaacaactttaccagttgcaccaaggttac 31299591  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 43334334 - 43334263
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| |||  |||  |||||||| |||||||||||||| ||||||| |||||||||||    
T  43334334 gcaacccggtgcactaaagctcccgcatc-gcagggtccgggaaggggtcccaccatttttggtgtattgtac 43334263  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 24448898 - 24448847
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  24448898 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 24448847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 35710321 - 35710270
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||    
T  35710321 gtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 35710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 41014327 - 41014276
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||    
T  41014327 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 41014276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 2838773 - 2838735
Alignment:
Q  260 cacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2838773 cacatgacaacaactttaccggttgcgccaaggttaccc 2838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 16957444 - 16957386
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  16957444 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 22861793 - 22861847
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacccttc 301  Q
    ||||| |||||| |||||||||||||||||| | ||||  |||||||||||||||    
T  22861793 gtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttacccttc 22861847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 4619109 - 4619181
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| ||   |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  4619109 gcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 4619181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 7368526 - 7368474
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    ||||||| |||||||| || ||| ||||| |||||||| ||||||||||||||    
T  7368526 gcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtccca 7368474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 8170109 - 8170157
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggtta 295  Q
    ||||| |||| | |||||||||||||||||||| ||||| |||||||||    
T  8170109 gtgacctttcggtcacatgacaacaactttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 13801772 - 13801844
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    ||||||| ||||||||||| ||   |||| || ||||| |||||||||||||| |||| || |||||||||||    
T  13801772 gcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtac 13801844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 30877569 - 30877621
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    ||||||| |||||||| || ||| ||||| |||||||| ||||||||||||||    
T  30877569 gcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtccca 30877621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 39801646 - 39801594
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtccca 176  Q
    ||||||| ||||||||||| |||  |||| | |||||||||||||||||||||    
T  39801646 gcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtccca 39801594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 59109 - 59037
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattttttgtgtattgtac 196  Q
    |||||||  |||||||||| |||  |||| |||| |||||||||||||||||| ||||||| |||||||||||    
T  59109 gcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtac 59037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 13150 - 13201
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  13150 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 13029 - 13086
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcatt 181  Q
    ||||||| |||||||||||  ||  |||| ||||||||||||||||||||||| ||||    
T  13029 gcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccatt 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 30587 - 30536
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  30587 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 10940 - 10882
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||||||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  10940 gcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 10818 - 10773
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaagg 292  Q
    ||||| || ||| |||||||||||||||||||| ||||||||||||    
T  10818 gtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 24895 - 24945
Alignment:
Q  248 tgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    |||| |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  24895 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 24945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 46961 - 46903
Alignment:
Q  124 gcaacccagtgcactaaagttcctacataagcagggtctgggaaggggtcccatcattt 182  Q
    ||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| |||||    
T  46961 gcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 46903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 226533 - 226583
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttacc 297  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||||||||    
T  226533 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 226583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 83883 - 83832
Alignment:
Q  247 gtgacatttcagccacatgacaacaactttacctgttgcaccaaggttaccc 298  Q
    ||||| |||||| |||||||||||||||||||  ||||| ||||||||||||    
T  83883 gtgacctttcagtcacatgacaacaactttactagttgcgccaaggttaccc 83832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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