View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18880_high_8 (Length: 245)
Name: NF18880_high_8
Description: NF18880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18880_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 21509512 - 21509730
Alignment:
| Q |
11 |
caaaggcattgcatttcataagtaaagctatcaagggtgattataatctcaatgacttcagtcttaatgaaaaaacaggattttctaaaaattctgttga |
110 |
Q |
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| T |
21509512 |
caaaggcattgcatttcataagtaaagcaatcaagggtgattataatctcaatgacttcagtcttaatgaaaaaacaggattttctaaaaattctgttga |
21509611 |
T |
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| Q |
111 |
acagaaagaaaatagttttcaggaagatgttaaatttcatgaaagaattactaggaaaaatggagcggtgaagcctccctcgcccatgcgagacccgcgt |
210 |
Q |
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| T |
21509612 |
acagaaagaaaatagttttcaggaagatgttaaatttcatgaaagaattactaggaaaaatggagcagtgaagcctccctcgcccatgcgagacccgcgt |
21509711 |
T |
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| Q |
211 |
catccatcacctaaggtat |
229 |
Q |
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||||||||||||||||||| |
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| T |
21509712 |
catccatcacctaaggtat |
21509730 |
T |
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