View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18880_low_7 (Length: 247)
Name: NF18880_low_7
Description: NF18880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18880_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28859412 - 28859175
Alignment:
| Q |
1 |
tatatcaaatgaaccacatacaacagagaataagaaaatggaactaggacaaatattatgc-----aatcacaacttgagattccaaacatctagttcct |
95 |
Q |
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| T |
28859412 |
tatatcaaatgaaccacatacaacagagaataagaaaatggaactaggacaaatattatgctatgcaatcacaacttgagattccaaacatctagt---- |
28859317 |
T |
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| Q |
96 |
aagccatcattctatacaatcaatcaaaattgggagactaataaacacaaaaataattacaaatatttcatcatatttccatagatataaacaaggtatt |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
28859316 |
--------attctatacaatcaatcaaaattgggagactaataaacacaaaaataattacaaatattgcttcatatttccatagatataaacaaggtatt |
28859225 |
T |
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| Q |
196 |
actgattagaaaactccaactcaattcttggagggctggcctatgatact |
245 |
Q |
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| T |
28859224 |
actgattagaaaactccaactcaattcttgcagggctggcctatggtact |
28859175 |
T |
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