View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18884_high_10 (Length: 340)

Name: NF18884_high_10
Description: NF18884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18884_high_10
NF18884_high_10
[»] chr1 (48 HSPs)
chr1 (87-333)||(44915403-44915651)
chr1 (113-333)||(51916741-51916960)
chr1 (113-287)||(7337798-7337971)
chr1 (108-332)||(27456319-27456551)
chr1 (113-265)||(45415343-45415494)
chr1 (118-319)||(31983969-31984176)
chr1 (113-269)||(34878425-34878579)
chr1 (133-287)||(29738771-29738924)
chr1 (137-268)||(10776612-10776744)
chr1 (122-287)||(11462582-11462747)
chr1 (143-287)||(23291778-23291923)
chr1 (120-287)||(49626701-49626866)
chr1 (108-286)||(15435009-15435185)
chr1 (113-286)||(1742065-1742236)
chr1 (148-287)||(32394818-32394955)
chr1 (134-287)||(5983641-5983794)
chr1 (134-287)||(35462172-35462325)
chr1 (131-259)||(36894404-36894528)
chr1 (113-226)||(3228054-3228166)
chr1 (118-287)||(18939111-18939277)
chr1 (113-205)||(35484595-35484686)
chr1 (144-287)||(8212045-8212187)
chr1 (113-287)||(21947753-21947925)
chr1 (133-230)||(7836958-7837054)
chr1 (113-287)||(14872423-14872597)
chr1 (113-287)||(26535184-26535351)
chr1 (202-333)||(31918861-31919000)
chr1 (137-266)||(15836001-15836128)
chr1 (110-263)||(21686654-21686804)
chr1 (180-265)||(45789415-45789498)
chr1 (113-269)||(940149-940303)
chr1 (113-269)||(44543057-44543209)
chr1 (133-195)||(41176986-41177047)
chr1 (1-39)||(44915317-44915355)
chr1 (258-335)||(7836874-7836951)
chr1 (180-269)||(50377177-50377264)
chr1 (119-269)||(568937-569085)
chr1 (150-269)||(9341545-9341662)
chr1 (136-335)||(48749997-48750192)
chr1 (113-269)||(32679253-32679407)
chr1 (119-262)||(43412162-43412301)
chr1 (183-266)||(34413247-34413330)
chr1 (218-265)||(35484548-35484595)
chr1 (201-287)||(13144947-13145032)
chr1 (180-264)||(34528569-34528650)
chr1 (137-266)||(16161640-16161767)
chr1 (194-286)||(27580263-27580356)
chr1 (122-187)||(31918772-31918836)
[»] chr5 (30 HSPs)
chr5 (113-316)||(7036008-7036210)
chr5 (133-287)||(6012273-6012426)
chr5 (133-287)||(13007029-13007182)
chr5 (113-282)||(31391896-31392065)
chr5 (113-287)||(38597578-38597750)
chr5 (113-287)||(26825209-26825384)
chr5 (134-287)||(9113860-9114012)
chr5 (119-266)||(26878235-26878380)
chr5 (137-287)||(34945226-34945375)
chr5 (113-333)||(13421724-13421941)
chr5 (115-269)||(38007140-38007291)
chr5 (134-287)||(6216696-6216852)
chr5 (127-287)||(8096633-8096790)
chr5 (113-287)||(25979938-25980111)
chr5 (149-266)||(2979469-2979584)
chr5 (133-286)||(11074036-11074188)
chr5 (113-287)||(11977072-11977245)
chr5 (113-291)||(15571266-15571443)
chr5 (163-265)||(10722603-10722705)
chr5 (149-266)||(39567112-39567227)
chr5 (182-241)||(11867529-11867587)
chr5 (113-265)||(24229942-24230095)
chr5 (137-319)||(14082467-14082655)
chr5 (136-266)||(14211037-14211162)
chr5 (108-269)||(7929974-7930130)
chr5 (155-269)||(8088366-8088477)
chr5 (109-286)||(41630287-41630454)
chr5 (223-269)||(4771030-4771075)
chr5 (206-266)||(19103630-19103689)
chr5 (214-266)||(28541069-28541120)
[»] chr7 (32 HSPs)
chr7 (113-287)||(42978391-42978565)
chr7 (113-287)||(37837594-37837766)
chr7 (113-287)||(30756954-30757127)
chr7 (113-285)||(19404892-19405062)
chr7 (109-265)||(9450294-9450449)
chr7 (113-287)||(47590097-47590267)
chr7 (133-287)||(34899742-34899892)
chr7 (133-287)||(12141442-12141596)
chr7 (113-287)||(39171726-39171900)
chr7 (113-287)||(40992965-40993138)
chr7 (113-260)||(8013627-8013773)
chr7 (133-319)||(24770058-24770243)
chr7 (113-287)||(13797067-13797239)
chr7 (133-287)||(48061225-48061379)
chr7 (134-265)||(48316969-48317099)
chr7 (136-319)||(35132757-35132937)
chr7 (176-287)||(45349938-45350048)
chr7 (164-250)||(19296712-19296797)
chr7 (149-266)||(22742757-22742872)
chr7 (136-333)||(1749234-1749426)
chr7 (113-262)||(38798575-38798717)
chr7 (201-269)||(5792667-5792735)
chr7 (107-269)||(5078548-5078707)
chr7 (113-179)||(45350434-45350500)
chr7 (113-269)||(4529862-4530017)
chr7 (109-269)||(39328946-39329105)
chr7 (208-266)||(48930657-48930714)
chr7 (165-266)||(24351000-24351099)
chr7 (180-269)||(25255087-25255174)
chr7 (281-337)||(25287262-25287318)
chr7 (281-333)||(40993141-40993193)
chr7 (281-333)||(47590270-47590322)
[»] chr6 (26 HSPs)
chr6 (113-287)||(12170277-12170450)
chr6 (113-287)||(33053303-33053476)
chr6 (104-287)||(605977-606159)
chr6 (113-287)||(3913709-3913881)
chr6 (134-286)||(23128421-23128572)
chr6 (107-269)||(30894414-30894573)
chr6 (143-287)||(34018372-34018515)
chr6 (133-287)||(68136-68288)
chr6 (117-287)||(127463-127625)
chr6 (110-265)||(32059688-32059840)
chr6 (133-247)||(29320037-29320150)
chr6 (109-261)||(29255603-29255754)
chr6 (133-265)||(7515358-7515490)
chr6 (149-269)||(32191885-32192004)
chr6 (113-212)||(32328793-32328891)
chr6 (217-287)||(32327352-32327422)
chr6 (180-269)||(30608667-30608754)
chr6 (110-168)||(9721763-9721821)
chr6 (113-198)||(9723602-9723687)
chr6 (223-287)||(11321604-11321668)
chr6 (189-269)||(34222653-34222731)
chr6 (118-264)||(4010660-4010803)
chr6 (149-266)||(545843-545957)
chr6 (121-226)||(31852370-31852474)
chr6 (183-266)||(1523259-1523339)
chr6 (180-269)||(24227864-24227954)
[»] chr4 (42 HSPs)
chr4 (113-287)||(2520578-2520751)
chr4 (113-333)||(54021662-54021889)
chr4 (113-287)||(21686376-21686548)
chr4 (113-287)||(5119139-5119313)
chr4 (113-287)||(26633806-26633978)
chr4 (113-265)||(19853669-19853819)
chr4 (137-287)||(22558599-22558749)
chr4 (133-287)||(4142890-4143042)
chr4 (133-287)||(22611005-22611157)
chr4 (113-287)||(53810829-53811002)
chr4 (113-268)||(9165196-9165351)
chr4 (113-287)||(45418330-45418500)
chr4 (113-269)||(35348107-35348261)
chr4 (113-268)||(9178158-9178312)
chr4 (153-284)||(32766355-32766485)
chr4 (112-286)||(26091050-26091222)
chr4 (113-291)||(10496143-10496316)
chr4 (131-283)||(43510018-43510169)
chr4 (113-287)||(13633915-13634089)
chr4 (113-265)||(24099227-24099379)
chr4 (113-224)||(48257647-48257757)
chr4 (149-269)||(43095471-43095586)
chr4 (152-265)||(56040801-56040915)
chr4 (113-287)||(47320537-47320709)
chr4 (180-269)||(10259048-10259136)
chr4 (118-259)||(53443932-53444070)
chr4 (133-269)||(22300666-22300800)
chr4 (113-287)||(33920853-33921025)
chr4 (215-287)||(40066190-40066262)
chr4 (109-266)||(27651745-27651900)
chr4 (149-269)||(51888370-51888488)
chr4 (180-255)||(21231604-21231678)
chr4 (107-287)||(29961060-29961243)
chr4 (110-333)||(36194511-36194731)
chr4 (180-254)||(21225344-21225417)
chr4 (149-287)||(22038936-22039070)
chr4 (201-269)||(9713796-9713863)
chr4 (183-255)||(22063948-22064019)
chr4 (219-269)||(9634580-9634630)
chr4 (145-198)||(40066265-40066317)
chr4 (180-224)||(29121876-29121920)
chr4 (133-193)||(56156782-56156841)
[»] chr8 (35 HSPs)
chr8 (113-265)||(31013726-31013877)
chr8 (113-287)||(27110597-27110770)
chr8 (107-333)||(37971072-37971294)
chr8 (121-325)||(28897502-28897712)
chr8 (113-258)||(10377480-10377623)
chr8 (133-287)||(23230447-23230600)
chr8 (180-286)||(14545036-14545143)
chr8 (118-265)||(7883395-7883541)
chr8 (113-255)||(8980980-8981121)
chr8 (131-268)||(3673247-3673381)
chr8 (107-264)||(25191223-25191378)
chr8 (113-265)||(40211460-40211612)
chr8 (137-332)||(7677362-7677562)
chr8 (113-229)||(17693805-17693919)
chr8 (113-269)||(45445963-45446117)
chr8 (133-286)||(20559880-20560030)
chr8 (133-286)||(20571442-20571592)
chr8 (144-269)||(29937929-29938052)
chr8 (119-287)||(1239537-1239703)
chr8 (133-287)||(20553379-20553531)
chr8 (118-291)||(15344094-15344265)
chr8 (118-291)||(15433159-15433330)
chr8 (118-291)||(15524463-15524634)
chr8 (113-230)||(1236883-1236999)
chr8 (113-198)||(8412571-8412655)
chr8 (112-266)||(24099417-24099567)
chr8 (201-287)||(24186792-24186878)
chr8 (201-266)||(14585569-14585634)
chr8 (113-212)||(29617665-29617763)
chr8 (120-269)||(33214783-33214930)
chr8 (184-287)||(40619206-40619307)
chr8 (183-265)||(18890861-18890942)
chr8 (118-287)||(36948571-36948738)
chr8 (180-287)||(44091881-44091986)
chr8 (144-269)||(8443672-8443795)
[»] chr3 (52 HSPs)
chr3 (113-287)||(10232851-10233024)
chr3 (113-287)||(21431406-21431578)
chr3 (113-287)||(47895932-47896105)
chr3 (113-269)||(35865087-35865241)
chr3 (113-263)||(9998247-9998397)
chr3 (131-286)||(54148787-54148941)
chr3 (133-287)||(6954831-6954984)
chr3 (113-287)||(10229255-10229430)
chr3 (113-287)||(10108019-10108190)
chr3 (143-333)||(20608979-20609175)
chr3 (113-287)||(48650869-48651043)
chr3 (109-263)||(40487102-40487254)
chr3 (113-269)||(33579649-33579803)
chr3 (113-265)||(45568601-45568752)
chr3 (109-269)||(47042205-47042364)
chr3 (113-287)||(36461566-36461739)
chr3 (113-287)||(40556492-40556665)
chr3 (133-287)||(52923252-52923403)
chr3 (115-265)||(9797686-9797833)
chr3 (113-333)||(23799990-23800220)
chr3 (113-261)||(7449063-7449209)
chr3 (113-261)||(7457205-7457351)
chr3 (113-333)||(43488670-43488905)
chr3 (136-269)||(29921856-29921988)
chr3 (136-269)||(29971009-29971141)
chr3 (113-210)||(38545616-38545712)
chr3 (133-256)||(32701299-32701421)
chr3 (137-265)||(21533966-21534092)
chr3 (109-287)||(31271942-31272119)
chr3 (144-265)||(26275951-26276070)
chr3 (113-269)||(46220459-46220613)
chr3 (113-269)||(50194437-50194591)
chr3 (113-291)||(12149915-12150090)
chr3 (194-266)||(37040632-37040704)
chr3 (183-266)||(42460596-42460679)
chr3 (201-287)||(36910776-36910862)
chr3 (113-286)||(43016636-43016808)
chr3 (113-269)||(629059-629214)
chr3 (281-333)||(53099746-53099798)
chr3 (136-266)||(21289977-21290104)
chr3 (214-333)||(51923611-51923728)
chr3 (119-266)||(7546397-7546544)
chr3 (149-234)||(4821624-4821708)
chr3 (133-265)||(12050804-12050936)
chr3 (180-269)||(29239185-29239273)
chr3 (187-228)||(44804888-44804929)
chr3 (180-269)||(53508069-53508156)
chr3 (214-269)||(20987952-20988007)
chr3 (223-269)||(1649309-1649355)
chr3 (187-269)||(29249098-29249178)
chr3 (214-287)||(9319937-9320010)
chr3 (236-287)||(18010921-18010973)
[»] chr2 (46 HSPs)
chr2 (113-292)||(7646263-7646442)
chr2 (113-265)||(36943281-36943432)
chr2 (112-287)||(9169393-9169566)
chr2 (133-287)||(4098914-4099067)
chr2 (113-287)||(7448039-7448211)
chr2 (133-287)||(4778564-4778717)
chr2 (109-287)||(29279706-29279882)
chr2 (109-287)||(31788243-31788420)
chr2 (113-287)||(43397256-43397427)
chr2 (119-265)||(18763265-18763409)
chr2 (113-265)||(1421462-1421617)
chr2 (113-287)||(11985366-11985538)
chr2 (127-333)||(37876687-37876892)
chr2 (134-287)||(8809094-8809245)
chr2 (131-264)||(17994874-17995006)
chr2 (133-255)||(27097573-27097693)
chr2 (113-287)||(4904281-4904444)
chr2 (118-270)||(7678024-7678181)
chr2 (119-269)||(12648078-12648226)
chr2 (113-227)||(12677491-12677604)
chr2 (137-287)||(38444982-38445130)
chr2 (183-332)||(10237305-10237452)
chr2 (180-269)||(11833341-11833430)
chr2 (164-284)||(19062491-19062608)
chr2 (113-226)||(35220122-35220231)
chr2 (133-287)||(5428003-5428156)
chr2 (113-196)||(31128974-31129056)
chr2 (160-263)||(32448782-32448882)
chr2 (109-287)||(25509200-25509378)
chr2 (225-287)||(31128915-31128977)
chr2 (180-269)||(1415422-1415510)
chr2 (149-266)||(14955350-14955465)
chr2 (149-269)||(18107891-18108008)
chr2 (196-287)||(4041730-4041820)
chr2 (180-287)||(29173855-29173962)
chr2 (128-266)||(37994081-37994216)
chr2 (108-174)||(42698922-42698988)
chr2 (183-284)||(6436468-6436568)
chr2 (153-269)||(30400191-30400307)
chr2 (170-266)||(3308787-3308881)
chr2 (133-269)||(24461250-24461382)
chr2 (153-269)||(29574787-29574901)
chr2 (201-287)||(36691753-36691837)
chr2 (204-269)||(23933775-23933839)
chr2 (182-259)||(41694474-41694550)
chr2 (281-333)||(7448214-7448266)
[»] scaffold0127 (1 HSPs)
scaffold0127 (113-287)||(15273-15445)
[»] scaffold0088 (1 HSPs)
scaffold0088 (113-287)||(50567-50740)
[»] scaffold0026 (1 HSPs)
scaffold0026 (113-287)||(71999-72172)
[»] scaffold0017 (1 HSPs)
scaffold0017 (113-287)||(32883-33056)
[»] scaffold0445 (1 HSPs)
scaffold0445 (113-269)||(1125-1279)
[»] scaffold0219 (1 HSPs)
scaffold0219 (114-262)||(14998-15145)
[»] scaffold0262 (1 HSPs)
scaffold0262 (118-287)||(1953-2120)
[»] scaffold0121 (1 HSPs)
scaffold0121 (144-335)||(31352-31548)
[»] scaffold0884 (1 HSPs)
scaffold0884 (133-259)||(2134-2260)
[»] scaffold0009 (1 HSPs)
scaffold0009 (113-269)||(58233-58387)
[»] scaffold0049 (1 HSPs)
scaffold0049 (154-269)||(71438-71549)
[»] scaffold0634 (1 HSPs)
scaffold0634 (113-291)||(8295-8470)
[»] scaffold0603 (1 HSPs)
scaffold0603 (136-287)||(7521-7669)
[»] scaffold0554 (1 HSPs)
scaffold0554 (134-269)||(10681-10812)
[»] scaffold0888 (1 HSPs)
scaffold0888 (185-266)||(1831-1911)
[»] scaffold0492 (1 HSPs)
scaffold0492 (137-266)||(12721-12848)
[»] scaffold0087 (1 HSPs)
scaffold0087 (113-226)||(25525-25637)
[»] scaffold0136 (2 HSPs)
scaffold0136 (215-287)||(37929-38000)
scaffold0136 (236-287)||(10176-10227)
[»] scaffold0154 (1 HSPs)
scaffold0154 (131-259)||(25132-25261)
[»] scaffold0618 (1 HSPs)
scaffold0618 (180-287)||(7924-8029)
[»] scaffold0128 (1 HSPs)
scaffold0128 (281-333)||(36787-36839)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 87 - 333
Target Start/End: Original strand, 44915403 - 44915651
Alignment:
Q  87 agctttcgtaagagttgaatttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggtttt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  44915403 agctttcgtaagagttgaatttctaattttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggtttt 44915502  T
Q  187 aggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggtttt--cacatatataaggcttttcctttt 284  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  44915503 aggtcattttttggcttaaaatcatcactctacatcttttttcctcttatctttccatctaaataagtggttttcgcatatatataaggcttttcctttt 44915602  T
Q  285 gtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  44915603 gtgatttcatcgtctaattgtggcgttgtgatgttagtcatattgtgcg 44915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 113 - 333
Target Start/End: Complemental strand, 51916960 - 51916741
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| ||||| || || |||||||||||||||| ||| ||||| |||||||||| |||||||||  |||||||| |||||||||||     
T  51916960 ttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggt-ggttttaggctattttttgacctaaaatcact 51916862  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttg 312  Q
      |||||||||||||| ||||| |||||| |||||||||||||||||||| ||| || | | |||||||||||||||||||| ||||||||  || |||     
T  51916861 catctacatctttttttctcttttctttcaatctaaataagtggttttcaaataaatcaagtttttccttttgtgatttcatcgtctaattacggtgtta 51916762  T
Q  313 tgttgttagtcatattgtgcg 333  Q
    ||||||||||| | |||||||    
T  51916761 tgttgttagtcgtcttgtgcg 51916741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 7337971 - 7337798
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||| | ||| ||||||||||| |||||||||||||||| ||| ||||| |||||||| | |||| || |||||||||||  ||| |||||||    
T  7337971 ttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggat-ggttctatgtcattttttgatctagaatcacc 7337873  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  7337872 cctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 7337798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 332
Target Start/End: Original strand, 27456319 - 27456551
Alignment:
Q  108 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaa 206  Q
    |||| |||| |||||||||||| ||||||||||  |||||||||||||||| ||||||| | |||||||| | |||||||  || ||||||   ||||||    
T  27456319 tctagttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggat-ggttttaactctttttttttacctaaa 27456417  T
Q  207 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttcattgtc 298  Q
    |||||  ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| | | | ||||        |||||||||||||| |||    
T  27456418 atcactcctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatatattaagttcttccttttgtgtttttgtgatttcatcgtc 27456517  T
Q  299 taattgtggcgttgtgttgttagtcatattgtgc 332  Q
    |||||| |||||||||||||||||||| ||||||    
T  27456518 taattgcggcgttgtgttgttagtcatcttgtgc 27456551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 113 - 265
Target Start/End: Original strand, 45415343 - 45415494
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |||||||||||  ||||||||||||||  ||| || || |||||||||| |||||||||||||||||||  ||| |||||||    
T  45415343 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggt-ggttttaggtcattttttgatctagaatcacc 45415441  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
     ||||||||||||||||| ||| |||||| || ||||||||||||||||||||    
T  45415442 cctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 45415494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 31983969 - 31984176
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| | ||||||||| |||||||||||||||  ||  |||||  ||||| ||| ||||||||||||||||||| |||| || |||| ||||    
T  31983969 tagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggt-ggttttaggtcattttttgacctagaagcacctctct 31984067  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc-------ttttgtgatttcattgtctaattgtggcgt 310  Q
    ||||||||||| | ||| |||||| ||||||||||||||||||||||||||| | | ||||||       |||||||||||| | |||||| || |||||    
T  31984068 acatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaagtttttccttgtgttttttgtgatttcgtcgtctaagtgcggcgt 31984167  T
Q  311 tgtgttgtt 319  Q
    |||||||||    
T  31984168 tgtgttgtt 31984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 34878579 - 34878425
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | |||||||||  ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||| ||||||     
T  34878579 ttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggagggg-tggttttaggtcattttttgacctagaatcact 34878481  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
      ||||||||||||||||  || |||||| || ||||||||||||||||||| ||||    
T  34878480 catctacatcttttttcc-attttctttcaatttaaataagtggttttcacacatat 34878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 29738924 - 29738771
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    |||| |||| |||||||||||||||| ||| ||||| |||||||||| |||||||||||| |||||  |||| ||||||| |||||||||||||| ||      
T  29738924 caacatctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcaattttttacctagaatcacccctctacatctttttcccct 29738826  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  29738825 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 29738771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 10776744 - 10776612
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt--cctctt 234  Q
    ||||| |||||||||||||||| ||||||||| ||||| |||| |||||||| |||||||||| |||| |||||||  ||||||||||||||  ||| ||    
T  10776744 ttctctctaaactttctttctccttcattcatcgaggaagggt-ggttttagatcattttttgacctagaatcacccatctacatcttttttttcctatt 10776646  T
Q  235 atctttccatctaaataagtggttttcacatata 268  Q
     |||||| |||||||||||||||||| |||||||    
T  10776645 ttctttcaatctaaataagtggtttttacatata 10776612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 11462747 - 11462582
Alignment:
Q  122 gagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacat 221  Q
    |||| ||| ||||| ||||| |||||||||||||||| ||| |||||||| |||||| || |||||||| |||||||| |||| ||||||| |||| |||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgagggg-tgattttaggttattttttgacctagaatcacccctctgcat 11462649  T
Q  222 cttttttcctc-ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||| | || |||||| |||||||||||||| |||||||| ||| | | |||| ||||||||    
T  11462648 cttttttcccctttttctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtg 11462582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 287
Target Start/End: Complemental strand, 23291923 - 23291778
Alignment:
Q  143 ctaaactttctttctcattcattcattgaggaggggttggt--tttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatcttt 240  Q
    |||||||||||||||| ||| ||||| ||| | |||| | |  |||||||||||||||| |||| ||||||| ||| |||||||||||| |||| |||||    
T  23291923 ctaaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacccctcgacatcttttttc-tcttttcttt 23291825  T
Q  241 ccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | ||||||||||||||||||||||||||| | | |||| ||||||||    
T  23291824 caatctaaataagtggttttcacatatatcaagttttttcttttgtg 23291778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 49626701 - 49626866
Alignment:
Q  120 gtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctac 219  Q
    |||||| ||| | ||||||||| ||||   ||| ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||||||| |||| |    
T  49626701 gtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaatcacccctctgc 49626799  T
Q  220 atcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||||| ||| |||||| ||||||||||||| |||||||| |||| | || ||| ||||||||    
T  49626800 atcttttttcccctt-tctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtg 49626866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 108 - 286
Target Start/End: Complemental strand, 15435185 - 15435009
Alignment:
Q  108 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaa 207  Q
    |||| |||| || ||||| ||| | ||||||||| | |||| ||||||||  |||||||||  ||||||||  |||||||||||||||||||  ||| ||    
T  15435185 tctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggc-ggttttaggtcattttttgatctagaa 15435087  T
Q  208 tcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    ||| | ||||||||||||||||| ||| |||||| ||||||||||||| |||||||||| || | | ||||||||||||    
T  15435086 tcaaccctctacatcttttttcc-cttttctttcaatctaaataagtgtttttcacataaatcaagtttttccttttgt 15435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 286
Target Start/End: Original strand, 1742065 - 1742236
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |  |||||||  |||||||| ||||||| ||| |||||  ||||  ||| ||||||||||||||||||| |||| |||||||    
T  1742065 ttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggt-ggttttaggtcattttttgacctagaatcacc 1742163  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
     |||| |||| |||| || ||| |||||| ||||||||||||||||||||||||||| | | |||| |||||||    
T  1742164 cctctccatc-ttttcccccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgt 1742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 32394818 - 32394955
Alignment:
Q  148 ctttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatcta 247  Q
    ||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| | || ||||| | |||| ||||||||| || ||| |||||| |||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacttagaatcatccctctgcatctttttccc-cttttctttcaatcta 32394915  T
Q  248 aataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||| |||||||||||||| ||| | | |||||||||||||    
T  32394916 aatgagtggttttcacatctatcaagtttttccttttgtg 32394955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 287
Target Start/End: Original strand, 5983641 - 5983794
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc- 232  Q
    |||||||| ||||||||| |||||| ||| ||||| |||||||| | |||||||| |||||||||| |||| ||||||   |||||||||||||||| |     
T  5983641 aacttctctctaaactttatttctccttcgttcatcgaggagggat-ggttttagatcattttttgacctagaatcactcgtctacatcttttttcccct 5983739  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| |||||||||| |||||||||||| ||| | | |||| ||||||||    
T  5983740 ttttctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtg 5983794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 35462325 - 35462172
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcc-taaaatcaccactctacatcttttttcctc 232  Q
    ||||| || |||||||||||||||| ||| || |||||| | |||| ||||||||||||||||||   | || ||||| | ||||||||||||||||| |    
T  35462325 aacttatctctaaactttctttctccttcgtttattgagaatgggt-ggttttaggtcattttttttacatagaatcatccctctacatcttttttcccc 35462227  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| || |||||||||||||||||||| ||| | | |||||||||||||    
T  35462226 ttttctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtg 35462172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 36894528 - 36894404
Alignment:
Q  131 ttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 230  Q
    |||||||||||  |||| ||||||||||   | ||||| || ||||||| |||| || ||||||||||| |||| | ||||| |||||||||||||||||    
T  36894528 ttcaacttctctttaaattttctttctc---cgttcatcgaagaggggt-ggttctaagtcattttttgacctagagtcacccctctacatcttttttcc 36894433  T
Q  231 tcttatctttccatctaaataagtggttt 259  Q
    |||| |||||| |||||||||||||||||    
T  36894432 tcttttctttcgatctaaataagtggttt 36894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 3228054 - 3228166
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||| ||||||| | ||||||||| ||||| ||| |||||| |||||||||  ||||||||| ||||||||||||||||||  |||| |||||||    
T  3228054 ttttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggt-ggttttaggtcattttttaacctacaatcacc 3228152  T
Q  213 actctacatctttt 226  Q
      ||||||||||||    
T  3228153 catctacatctttt 3228166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 287
Target Start/End: Original strand, 18939111 - 18939277
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| |||| |||||| ||||  |||||||||| |||||| || |||||| ||| |||||||||||||||||||  ||| ||||||| ||||    
T  18939111 tagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggt-ggttttaggtcattttttgatctagaatcacctctct 18939209  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||| ||||||| ||| |||||| || ||||||||| ||||||||| |||| | | ||||| |||||||    
T  18939210 gcatc-tttttcccctt-tctttcaatttaaataagtagttttcacacatatcaagtttttcattttgtg 18939277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 35484686 - 35484595
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaa 205  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| ||||||||| ||||| |||||||||||||| |||||    
T  35484686 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttgtaggtcattttttgacctaa 35484595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 287
Target Start/End: Complemental strand, 8212187 - 8212045
Alignment:
Q  144 taaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcca 243  Q
    |||| ||| |||||| |||||||||  ||||||||| | |||||| | ||||||||  ||| ||||||| |||||||||||||||   ||| |||||  |    
T  8212187 taaaatttttttctccttcattcatcaaggaggggt-gcttttagattattttttgatctacaatcacctctctacatcttttttttccttttctttaaa 8212089  T
Q  244 tctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||||||||||||||| | | ||| |||||||||    
T  8212088 tctaaataagtggttttcacatatatcaagttttcccttttgtg 8212045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 21947925 - 21947753
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| ||||| || || |||||||||||||||| ||| ||||| ||||| |||| |||||||||| ||||||   |||| ||||| |    
T  21947925 ttttctagtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggt-ggttttaggttatttttaa-cctagaatcatc 21947829  T
Q  213 actctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
      ||||||| |||||| || ||| |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  21947828 catctacatatttttttccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 21947753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 7837054 - 7836958
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 230  Q
    ||||||||| |||||| ||||||||| ||| ||||| ||||| |||| |||||||||||||||||||  ||| ||||||| ||| |||||||||||||    
T  7837054 caacttctctctaaaccttctttctctttcgttcatcgaggaagggt-ggttttaggtcattttttgatctagaatcacccctcgacatcttttttcc 7836958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 14872423 - 14872597
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||  || ||||||||||||  ||||||||| ||| ||| || |||||| |||||||||||| | || ||||||     
T  14872423 ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgt-ggttttcggtcattttttgacttagaatcact 14872521  T
Q  213 actctacatc-ttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||| ||||||||  || |||||| || ||||||||||||||| ||| |||| | | |||||| ||||||    
T  14872522 cctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtg 14872597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 26535184 - 26535351
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |  |||||||| ||||||||||| |||| ||| |||||  |||| | || ||||||||||     |||| |||| ||||||     
T  26535184 ttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagt-ggttttaggt-----tttgacctagaatcaca 26535277  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
      |||||||||||||  | ||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  26535278 catctacatctttttctc-cttttctttcaatctaaataagtggttttcacatatattaagtttttccttttgtg 26535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 31918861 - 31919000
Alignment:
Q  202 ctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttca 293  Q
    ||||||||| |  ||| |||||||||||||||| ||| || ||||||||||||||||||||||||||| | | |||| |        ||||||||||||     
T  31918861 ctaaaatcatccatctgcatcttttttcctcttttctatcaatctaaataagtggttttcacatatatcaagttttttcttttgtatttttgtgatttcg 31918960  T
Q  294 ttgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    | ||||||||| |||| ||||||||||| ||| |||||||    
T  31918961 tcgtctaattgcggcgatgtgttgttagccattttgtgcg 31919000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 15836001 - 15836128
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 236  Q
    ||||| || ||||||||||||| || ||||||  ||||| ||| ||||||||||||||||||| |||| ||||||| || |||||  ||||||  ||| |    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggt-ggttttaggtcattttttgacctagaatcaccgctatacat-atttttctcctttt 15836098  T
Q  237 ctttccatctaaataagtggttttcacata 266  Q
    || || || |||||||||||||||||||||    
T  15836099 ctatcaatttaaataagtggttttcacata 15836128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 263
Target Start/End: Original strand, 21686654 - 21686804
Alignment:
Q  110 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatc 209  Q
    ||||||| |||||||| ||| | |||||| |  ||||| |||||||||| ||| ||||| |||||| | | | |||||||||||||||||  ||| ||||    
T  21686654 taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagat-gattttaggtcattttttgatctagaatc 21686752  T
Q  210 accactctacatcttttttcctcttatctttccatctaaataagtggttttcac 263  Q
    ||  |||||||||||||||||  || |||||| || ||||||||||||||||||    
T  21686753 act-ctctacatcttttttccattt-tctttcaatttaaataagtggttttcac 21686804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 45789415 - 45789498
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    |||||||||||||||||||| |||| ||||||| |||| |||| ||||||| ||| |||||| || ||||||||||||||||||||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatc-tttttcccctt-tctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 940149 - 940303
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||||||| |  || ||||| ||||| |||||||||| ||  ||||| ||||| | || ||||||| ||||||||||  |||| |||||||    
T  940149 ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagt-ggttttaagtcatttttta-cctagaatcacc 940246  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
      ||| |||||| ||||| ||| |||||  || ||||||||||||||||||||||||    
T  940247 catctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatat 940303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 44543057 - 44543209
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| ||||| |||| |||| ||||| |||| | |||||||| ||| |||| |||||||||| |    
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggt-gcttttaggttattctttgacctaaaatcagc 44543155  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     |||| |||||||||||| ||| |||||| ||||||||||||| |||||||| ||||    
T  44543156 -ctctgcatcttttttcc-ctt-tctttcgatctaaataagtgattttcacaaatat 44543209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 41176986 - 41177047
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattt 195  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||    
T  41176986 caacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44915317 - 44915355
Alignment:
Q  1 cttttcaatagtgtcatactttaagatctatactcctta 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44915317 cttttcaatagtgtcatactttaagatctatactcctta 44915355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 7836951 - 7836874
Alignment:
Q  258 tttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcgac 335  Q
    |||||||||||| | | |||| ||||||||||||||| |||||| || |||||||||||||| ||| | |||||||||    
T  7836951 tttcacatatatcaagttttttcttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgac 7836874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 50377177 - 50377264
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||||||||| |||| ||||| | |||| ||| ||||||||  || |||||| || ||||||||||||||||||||||||    
T  50377177 tggttttaggtcattttttgacctagaatcatccctct-cat-ttttttcccattttctttcaatttaaataagtggttttcacatatat 50377264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 269
Target Start/End: Complemental strand, 569085 - 568937
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtca-ttttttggcctaaaatcaccactct 217  Q
    ||||||| ||| |||||||||||  |||| |||||||||| |||| ||||  |||||||| |||||||| ||   ||||||  |||| |||| || ||||    
T  569085 agtgagagaaacttcaacttctctataaa-tttctttctctttcactcatctaggagggggtggttttaagtatgtttttttacctagaatcccccctct 568987  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||| || ||| |||||| ||||||||||||| ||||||| |||||    
T  568986 acatctttttccc-ctt-tctttcaatctaaataagtgattttcacgtatat 568937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 9341545 - 9341662
Alignment:
Q  150 ttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaa 249  Q
    ||||||||| |||| |||| || |||||| |||||||||||||||||||| | || |||||||  | | |||| ||||||||||| |||||| || ||||    
T  9341545 ttctttctctttcactcatcgaagagggggtggttttaggtcattttttgacttagaatcacctgtatgcatc-tttttcctctt-tctttcaatataaa 9341642  T
Q  250 taagtggttttcacatatat 269  Q
    ||||   |||||||||||||    
T  9341643 taagaaattttcacatatat 9341662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 335
Target Start/End: Original strand, 48749997 - 48750192
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||| ||| |||| |||| |||||||||| | | ||||||||  ||||| |||| ||||||  || | |||||||||||| |||     
T  48749997 cttctctctaagttttcttcctctttcactcatcgaggaggggt-gatattaggtcaaattttgacctagaatcactcct-tgcatcttttttcccctt- 48750093  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcgac 335  Q
    |||||| ||||||||||||| |||||||||| || | | |||| |||| ||||||||  ||||| | || | |||||||||||| ||| | |||||||||    
T  48750094 tctttcaatctaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgac 48750192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 32679407 - 32679253
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||||| |||||| || ||||  |||||||||| |||| || | |||||||||| ||||||| ||||||||||| | || ||||| |    
T  32679407 ttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggt-ggttttatgtcattttttgacatagaatcatc 32679309  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     |||| || |  ||||  |||| |||||| || |||||||||| ||| |||||||||    
T  32679308 cctctgcaccaatttt-atcttttctttcaatttaaataagtgatttccacatatat 32679253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 262
Target Start/End: Original strand, 43412162 - 43412301
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 218  Q
    ||||||||||| |||||||| || ||||  | |||||||| ||||||||| ||||||||||  ||| |  |||| |||||| | |||||||||| || |     
T  43412162 agtgagaaaaacttcaacttatctctaacttctctttctctttcattcatcgaggaggggtgagttgt--gtca-tttttgacttaaaatcacccctatg 43412258  T
Q  219 catcttttttcctcttatctttccatctaaataagtggttttca 262  Q
     ||||||||||||||| |||||  || |||||||||| ||||||    
T  43412259 tatcttttttcctctt-tcttttgatttaaataagtgattttca 43412301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 34413330 - 34413247
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||||||||| |||||   ||| ||||||| |||| |||||||||| | | | |||||| ||||||||||||| ||||||||||    
T  34413330 ttttaggtcaattttttatctagaatcacccctctgcatctttttttcccctttctttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 35484595 - 35484548
Alignment:
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    ||||||||||| | ||| |||||| |||||||||||||||||||||||    
T  35484595 acatctttttttcccttttctttcaatctaaataagtggttttcacat 35484548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 13145032 - 13144947
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||| ||||| | |||||||| ||||| || ||| |||||| |||||||||||||||||||| |||||| |   |||||||||||||    
T  13145032 cctagaatcatccctctacatatttttacccctt-tctttcaatctaaataagtggttttcatatatatcaactttttccttttgtg 13144947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 34528569 - 34528650
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcaca 264  Q
    |||||||| ||||||||||| |||| ||||||| |||| ||||||||| ||   | |||||| ||||||||||||| ||| ||||    
T  34528569 tggttttatgtcattttttgacctagaatcacccctctgcatctttttccc---tttctttcgatctaaataagtgatttccaca 34528650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 16161640 - 16161767
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 236  Q
    ||||| ||||| |||||| ||| ||||  ||| ||||||||||   |||||||||| |||||| |||| ||||||| |||| ||| |||||||  ||| |    
T  16161640 ttctctctaaattttcttcctctttcacacatcgaggaggggtaa-ttttaggtcaatttttgacctagaatcacctctcttcatattttttctcctt-t 16161737  T
Q  237 ctttccatctaaataagtggttttcacata 266  Q
     |||| ||||||||||||| ||| ||||||    
T  16161738 atttcaatctaaataagtgatttccacata 16161767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 27580356 - 27580263
Alignment:
Q  194 tttttggcctaaaatcaccactctacatcttttttcct-cttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    |||||| |||| ||||| | |||||||||||||||  | | | || ||| ||||| ||||||||||||||||||||| | | ||||||||||||    
T  27580356 tttttgacctagaatcatccctctacatcttttttttttcctttcattcaatctatataagtggttttcacatatatcaagtttttccttttgt 27580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 31918772 - 31918836
Alignment:
Q  122 gagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggtttta 187  Q
    |||||||| ||||| ||||| |||||||||||||| |||| |||| | ||||||||| ||||||||    
T  31918772 gagaaaaacttcaatttctctctaaactttctttcacatttattcgtcgaggagggg-tggtttta 31918836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 316
Target Start/End: Original strand, 7036008 - 7036210
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||| |||||||||  ||| ||||| ||||||||||||||||||| |||||||||||     
T  7036008 ttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggt-ggttttaggtcattttttgacctaaaatcact 7036106  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttg 312  Q
      |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |   |||| ||||||||||||| | |||| |||| ||||| |    
T  7036107 catctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtgatttcgtcgtctgattgcggcgtgg 7036206  T
Q  313 tgtt 316  Q
    ||||    
T  7036207 tgtt 7036210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 6012426 - 6012273
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||| | |    
T  6012426 caacttctctctaaactttctttctccttcgttcattgaggaggggt-ggttttaggtcattttttgacatagaatcacccctctacatctttttttccc 6012328  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||| ||||||| | ||| | | |||||||||||||    
T  6012327 ttttctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtg 6012273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 13007029 - 13007182
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| ||||| |||||| ||| ||||||||||||||||||| |||| ||||||| ||||||| |||||||||      
T  13007029 caacttctctctaaactttctttctccttcgttcatcgaggagaggt-ggttttaggtcattttttgacctagaatcacccctctacaccttttttccca 13007127  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  13007128 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 13007182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 282
Target Start/End: Complemental strand, 31392065 - 31391896
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||  || ||||| ||||||||| |||||||||||||||||||| |||| |||||||    
T  31392065 ttttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggagggg-tggttttaggtcattttttgacctagaatcacc 31391967  T
Q  213 actctacatcttttt-tcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 282  Q
     |||||||||||||| ||| ||| ||  || ||||||||||||||||||||||| ||| | | ||||||||    
T  31391966 cctctacatctttttctccccttttcgatcaatctaaataagtggttttcacatttatcaagtttttcctt 31391896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 38597578 - 38597750
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| ||||||||| ||||||||||| |||||||| |||| |||||||    
T  38597578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggttattttttgacctagaatcacc 38597676  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||  |||||| || |||||||||| ||||||||| ||| | | |||||||||||||    
T  38597677 cctctacatcttttttcc-ctattctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtg 38597750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 26825209 - 26825384
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg--cctaaaatca 210  Q
    |||||||||| || ||| | ||| ||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||| |||||| |  |||| |||||    
T  26825209 ttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggt-ggttttaggtcttttttttggacctagaatca 26825307  T
Q  211 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  26825308 ccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 26825384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 9114012 - 9113860
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 233  Q
    |||||||| |||||||||||||||| ||| ||||| |||||||||| | ||||||||||||||||  |||| ||||||| |||||||||||||||||  |    
T  9114012 aacttctctctaaactttctttctctttcgttcatcgaggaggggt-gattttaggtcattttttaacctagaatcacccctctacatcttttttcccat 9113914  T
Q  234 tatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | |||||  ||||||||||||||||||||||| ||| | | |||||||||||||    
T  9113913 tttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtg 9113860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 119 - 266
Target Start/End: Complemental strand, 26878380 - 26878235
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 218  Q
    ||||||| ||| ||||||||||| |||||||||||||||| ||||||||| |||||| ||| ||||||| ||||||||| |  ||| ||||||| |||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggt-ggttttatgtcattttt-gatctagaatcacctctcta 26878283  T
Q  219 catcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    ||||||||| || ||| |||||| ||||||||||||||||||||||||    
T  26878282 catctttttcccccttttctttcaatctaaataagtggttttcacata 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 137 - 287
Target Start/End: Original strand, 34945226 - 34945375
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 236  Q
    ||||| |||||||||||||||| ||| ||||| || || || | ||||||||||||||||||| |||| |||||||  |||||||||||||||| ||| |    
T  34945226 ttctctctaaactttctttctccttcgttcatcgaagaaggat-ggttttaggtcattttttgacctagaatcacccttctacatcttttttcccctttt 34945324  T
Q  237 ctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  34945325 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 34945375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 333
Target Start/End: Original strand, 13421724 - 13421941
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |||||||||||  ||||||||||||||  ||||||||| ||| | |  | | ||||||||||||||||| | || |||||||    
T  13421724 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat-gagtatgaat-gattttaggtcattttttgacatagaatcacc 13421821  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttg 312  Q
     |||||||||||||| || ||| |||||  ||||||||||||||||||| ||||||||| | ||||| |||||||||||  | |||||| ||||  ||||    
T  13421822 -ctctacatctttttcccccttttcttttaatctaaataagtggttttcccatatataaagtttttctttttgtgattttttcgtctaagtgtgatgttg 13421920  T
Q  313 tgttgttagtcatattgtgcg 333  Q
    ||||||| ||| | |||||||    
T  13421921 tgttgttcgtcgtcttgtgcg 13421941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 115 - 269
Target Start/End: Original strand, 38007140 - 38007291
Alignment:
Q  115 ttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac 214  Q
    ||||||||||| ||| |  | |||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||  ||||||| |    
T  38007140 ttctagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctcgaatcacccc 38007238  T
Q  215 tctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||  | ||| |||||| || ||||||||||||||||||| ||||    
T  38007239 tctacatcttttt--cccttttctttcaatttaaataagtggttttcacacatat 38007291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 287
Target Start/End: Original strand, 6216696 - 6216852
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 233  Q
    |||||||| ||||||||| |||||||||| ||||| ||||| |||| |||||||||||||| |||| |||||||||| |  ||||||| | |||||| ||    
T  6216696 aacttctctctaaactttatttctcattcgttcatcgaggatgggt-ggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccct 6216794  T
Q  234 ----tatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
        | |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  6216795 ttgctttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 6216852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 8096790 - 8096633
Alignment:
Q  127 aaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttt 226  Q
    ||||| ||||||||| ||||||||| |||||  ||| || ||||||||||  ||||||||||||||||||| | |||| ||||||| |||||  ||||||    
T  8096790 aaattccaacttctctctaaactttttttcttcttcgtttattgaggagga-ttggttttaggtcattttt-gacctagaatcacccctctatttctttt 8096693  T
Q  227 ttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  8096692 ttcc-cttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 8096633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 25979938 - 25980111
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||  ||| | ||||||||| |||||||||||||||| ||| ||||| ||||| |||| ||||| ||||||||||||| |||  ||| |||    
T  25979938 ttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-ggtttcaggtcattttttgacctggaattacc 25980036  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
      |||||||||||||||| |||   |||| | |||||||||||||||| |||| |||   | |||||||||||||    
T  25980037 cttctacatcttttttcccctttgttttcaacctaaataagtggttttaacatctatcgagtttttccttttgtg 25980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 149 - 266
Target Start/End: Complemental strand, 2979584 - 2979469
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||| |||| |||||||||||||||| |||||| ||||||    
T  2979584 tttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctt-tctttcaatctaa 2979487  T
Q  249 ataagtggttttcacata 266  Q
    ||||||| ||||||||||    
T  2979486 ataagtgattttcacata 2979469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 133 - 286
Target Start/End: Complemental strand, 11074188 - 11074036
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    |||||| || ||||||||||||||||  || ||||| |||||| || ||||||||||| |||||| | |||| ||||| |||||||| |||||||| | |    
T  11074188 caacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggttattttt-gacctagaatcatcactctacgtctttttttccc 11074090  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    || |||||  |||||||||||||| |||||||| ||| | | ||||||||||||    
T  11074089 ttttcttttaatctaaataagtggctttcacatctatcaagtttttccttttgt 11074036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 11977245 - 11977072
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 211  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||| ||| ||||| ||| |||||| |||||||| |  ||||||   |||| |||||     
T  11977245 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggt-ggttttagatttttttttttacctagaatcaa 11977147  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
      ||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  11977146 acctcgacatcttttttcc-cttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 11977072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 291
Target Start/End: Original strand, 15571266 - 15571443
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 211  Q
    ||||||||||||| ||| |  |||||||| | || ||||||||||| ||||||||| ||||||   | ||||||| |||||||||| | |||| |||||     
T  15571266 ttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaat-ggttttatgtcatttttttgacctagaatcat 15571364  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
    |  || |||||||||||| || | |||||| ||||||||||||||||||||||||||| | | |||||||||||| ||||    
T  15571365 ccatcaacatcttttttc-tcatttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtaattt 15571443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 10722603 - 10722705
Alignment:
Q  163 attcattgaggaggggttggttttaggtcattttttgg-cctaaaatcaccac-tctacatcttttttcctcttatctttccatctaaataagtggtttt 260  Q
    |||||| |||||| ||| |||||||||||||||||| | |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  10722603 attcatcgaggagaggt-ggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctctt-tctttcaatctaaataagtgttttt 10722700  T
Q  261 cacat 265  Q
    |||||    
T  10722701 cacat 10722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 39567112 - 39567227
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||  |||| ||||||||| || ||| |||||| ||||||    
T  39567112 tttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacgcctctgcatctttttccccctt-tctttcaatctaa 39567209  T
Q  249 ataagtggttttcacata 266  Q
    ||||||| ||||||||||    
T  39567210 ataagtgattttcacata 39567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 11867529 - 11867587
Alignment:
Q  182 gttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttc 241  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||    
T  11867529 gttttaggtcattttt-gacctaaaatcaccactctacatcttttttcatcttttctttc 11867587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 24230095 - 24229942
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaa-ctttctttctcattcattcattgaggaggggttggttttaggtc-attttttgg-cctaaaatc 209  Q
    ||||||||||||| ||| | ||||||||| ||||| |||||||| |  ||| ||||| |||||| ||  ||||||||||  ||||||||  |||||||||    
T  24230095 ttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtgga-ggttttaggtttattttttgtacctaaaatc 24229997  T
Q  210 accactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    ||| |||||||| ||||| ||| || |||||| ||||||||||||| |||||||||    
T  24229996 acccctctacatatttttccctttt-tctttcaatctaaataagtgattttcacat 24229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 319
Target Start/End: Complemental strand, 14082655 - 14082467
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac-tctacatcttttttcctctta 235  Q
    ||||| ||||||||||||| || |||  |||| ||||||  || ||||||| ||||||||||| | |  ||||||| | ||||||| ||||||   |||     
T  14082655 ttctctctaaactttctttatccttcgctcatcgaggagaagt-ggttttatgtcattttttgactttgaatcaccccctctacatattttttttccttt 14082557  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttcct------tttgtgatttcattgtctaattgtggcgttgtgttgtt 319  Q
    | |||| |||||||||||||| |||||||||||| | | ||||| |      ||||||||||||| |||||| |||||||||||||||||    
T  14082556 tatttcaatctaaataagtggctttcacatatatcaagtttttcttatattttttgtgatttcatcgtctaagtgtggcgttgtgttgtt 14082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 14211037 - 14211162
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||| ||| |||| |||| ||||||||  || |||||||||| |||||| |||| ||||||| |||| ||||||||| ||| |      
T  14211037 cttctctctaagttttcttcctctttcactcatcgaggaggg--tgattttaggtcaatttttgacctagaatcacccctctgcatctttttcccttt-- 14211132  T
Q  236 tctttccatctaaataagtggttttcacata 266  Q
     ||||| ||||||||||||| ||||||||||    
T  14211133 -ctttcaatctaaataagtgattttcacata 14211162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 7929974 - 7930130
Alignment:
Q  108 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaa 207  Q
    |||| ||||||||||||| ||| | ||| ||||| |||||||||||||||| ||||| ||   ||||||||| | |||||||||| |||||| |||| ||    
T  7929974 tctagttttctagtgagagaaactccaaattctctctaaactttctttctccttcat-ca---aggaggggt-gattttaggtcaatttttgacctagaa 7930068  T
Q  208 tcaccactctacatcttttt-tc-ctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||| || | |||| |||| || ||||| |||||  |||||||  ||||||||||||||||||    
T  7930069 tcacccctgtgcatcattttctctctcttttcttttaatctaaa--agtggttttcacatatat 7930130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 8088477 - 8088366
Alignment:
Q  155 tctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagt 254  Q
    |||| |||| |||||||| |||||| | |||||| ||||| |||| ||| || ||||| |||| ||||||||||| |||| |||||| ||||||||||||    
T  8088477 tctctttcactcattgagaaggggt-gattttagatcattctttgacctgaagtcacctctctgcatcttttttc-tctt-tctttcgatctaaataagt 8088381  T
Q  255 ggttttcacatatat 269  Q
    | |||||||| ||||    
T  8088380 gattttcacaaatat 8088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 286
Target Start/End: Original strand, 41630287 - 41630454
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    ||||||||  ||||||| ||| ||||||||||| |||| |||||||||    |||||||| || || ||  ||||||||||||| |||||| |||| |||    
T  41630287 ctaatttttcagtgagagaaacttcaacttctctctaagctttctttc----tcattcatcgaagatgg--tggttttaggtca-tttttgacctagaat 41630379  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    || | ||||||||||||||  | | | |||||| |||||||||||  |||||||||| ||||| | ||||| ||||||    
T  41630380 ca-ctctctacatcttttt--cccatttctttcaatctaaataagccgttttcacatctataaagtttttctttttgt 41630454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 4771030 - 4771075
Alignment:
Q  223 ttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||    
T  4771030 ttttttcctttt-tctttcaatctaaataagtggttttcacatatat 4771075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 19103689 - 19103630
Alignment:
Q  206 aatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    ||||||| |||  |||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  19103689 aatcacccctcagcatcttttttcccctt-tctttcgatctaaataagtgattttcacata 19103630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 28541120 - 28541069
Alignment:
Q  214 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||| |||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  28541120 ctctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacata 28541069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 42978391 - 42978565
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  42978391 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 42978489  T
Q  213 actctacatcttttt-tcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||||||||| ||| ||| ||  || ||||||||||||||||||||||||||||| | |||||||||||||    
T  42978490 actctacatctttttctccccttttcgatcaatctaaataagtggttttcacatatataaagtttttccttttgtg 42978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 37837766 - 37837594
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||| ||||| ||| | ||||||||| ||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  37837766 ttttctaatgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggt-ggttttaggtcattttttgacctagaatcacc 37837668  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||| | | |||| ||||||||    
T  37837667 cctctacatcttttttcc-cttttctttcaatctaaataagtggtttacacatatattaagttttttcttttgtg 37837594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 30757127 - 30756954
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| ||||| || ||| ||||||||||| ||||| |||||||||| ||| ||||| |||||||||| |||||||||| |||||||| |||| |||||||    
T  30757127 ttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggt-ggttttaggtaattttttgacctagaatcacc 30757029  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||| | | |||||||||||||    
T  30757028 cctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtg 30756954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 113 - 285
Target Start/End: Complemental strand, 19405062 - 19404892
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| |||||  ||||||||| || |||||||||| |||||| ||||||||||||||||||| |||| |||||||    
T  19405062 ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggt-ggttttaggtcattttttgacctagaatcacc 19404964  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttg 285  Q
     ||||||||||||||| | ||| |||||| |||||||||||||||||||||||| || | | |||||||||||    
T  19404963 cctctacatctttttttc-cttttctttcaatctaaataagtggttttcacataaatcaagtttttccttttg 19404892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 265
Target Start/End: Complemental strand, 9450449 - 9450294
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    ||||||||||||||||| ||| | ||||||||   ||||||||||||||| ||| ||||| |||||||| | ||||||||||||||||||| |||| |||    
T  9450449 ctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggat-ggttttaggtcattttttgacctagaat 9450351  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    ||||  |||||||||| ||||| ||| |||||| ||||||||||||| |||||||||    
T  9450350 cacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacat 9450294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 47590097 - 47590267
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||||| ||||||||| ||||| |||||||||||||| ||||| ||||||||| || |||||||||| ||||||  ||| |||||||    
T  47590097 ttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggagggg-tgattttaggtca-tttttgaactagaatcacc 47590194  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||||||| ||||| ||| |  |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  47590195 cctctacatttttttccctat--tctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 47590267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 34899892 - 34899742
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| ||||  || |||    |||||||||||||||||||| |||| ||||||| ||||||||||||||| | |    
T  34899892 caacttctctctaaactttctttctccttcgttcaccgatgag----tggttttaggtcattttttgacctagaatcacccctctacatctttttttccc 34899797  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  34899796 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 34899742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 12141596 - 12141442
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt-cct 231  Q
    ||||||||| |||||||||||||||| ||| ||||| || ||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||| |||    
T  12141596 caacttctctctaaactttctttctccttcgttcatcgaagaggggt-ggttttaggtcattttttgacatagaatcacccctctacatcttttttccct 12141498  T
Q  232 cttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     || | |||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  12141497 tttttatttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 12141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 39171900 - 39171726
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | |||| | || |||||||||||||||  ||| ||||| |||||||||| |||| |||||||||||||| |||| |||||||    
T  39171900 ttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggt-ggttgtaggtcattttttgacctagaatcacc 39171802  T
Q  213 actctacatctt--ttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||||||||||  ||||||| || |||||| |||||||||||||||||||| || ||| | | |||||||||||||    
T  39171801 cctctacatcttttttttcct-ttttctttcgatctaaataagtggttttcatatctatcaagtttttccttttgtg 39171726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 40992965 - 40993138
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||  ||||  ||| ||||| ||||| ||  | |||||||||||||||||| |||||||||||     
T  40992965 ttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatgg--tagttttaggtcattttttgacctaaaatcact 40993062  T
Q  213 actctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||| || ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  40993063 cctctacatctttttttccacttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 40993138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 260
Target Start/End: Complemental strand, 8013773 - 8013627
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| ||||||||||| |||||||||||||||  ||  ||||| |||||||||| |||||||| |||||||||| |||| |||||||    
T  8013773 ttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggt-ggttttagatcattttttgacctagaatcacc 8013675  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggtttt 260  Q
     ||||||||||||||| | ||| ||||||  |||||||||||| ||||    
T  8013674 cctctacatctttttttcccttttctttcagtctaaataagtgatttt 8013627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 319
Target Start/End: Original strand, 24770058 - 24770243
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||||||| ||||| |||  ||||| | |||||||||||||| || | || ||||| |  ||||||||||||||  ||    
T  24770058 caacttctctctaaactttctttctcattcgttcatcgagacggggt-gattttaggtcattttatgacttagaatcatccatctacatcttttttt-tc 24770155  T
Q  233 ttatctttccatctaaataagtggttttcacatatat-aaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 319  Q
    || |||||| ||||||||||||||||||||||||||| ||   |||| ||||||||||||| | |||||| || || |||||||||||    
T  24770156 ttttctttcaatctaaataagtggttttcacatatatcaaatttttttcttttgtgatttcgtcgtctaagtgcggtgttgtgttgtt 24770243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 13797239 - 13797067
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |||||||||||  |||| |||||||||| ||| ||||| ||||| || | ||||||||||||||||||  |||| |||||||    
T  13797239 ttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggat-ggttttaggtcattttttaacctagaatcacc 13797141  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||||||||| |||||| ||| |||||| || |||||||||| |||| |||| ||| | | |||||||||||||    
T  13797140 cctctacatct-ttttccccttttctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtg 13797067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 48061225 - 48061379
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||||||||||| || ||| ||||| |||||| ||| ||||||||||||||||||| | || ||||||| | |||||| |||||||| |    
T  48061225 caacttctctctaaactttctttatccttcgttcatcgaggagaggt-ggttttaggtcattttttgacttagaatcaccccactacatattttttcccc 48061323  T
Q  233 ttat-ctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || | ||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  48061324 tttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 48061379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 265
Target Start/End: Complemental strand, 48317099 - 48316969
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 233  Q
    |||||||| ||||| || ||||||| ||| |||||  ||||||||| ||||||||||||||||| | |||| ||||||| |||||||||||||| || ||    
T  48317099 aacttctctctaaatttgctttctccttcgttcatcaaggaggggt-ggttttaggtcatttttggacctagaatcacccctctacatctttttccccct 48317001  T
Q  234 tatctttccatctaaataagtggttttcacat 265  Q
    | |||||| || ||||||||||||||||||||    
T  48317000 tttctttcaatttaaataagtggttttcacat 48316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 136 - 319
Target Start/End: Original strand, 35132757 - 35132937
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||| ||||||||||||||||| |||     
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctt- 35132854  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgtt 319  Q
    |||||  ||||||||||||| |||||||||| || | | |||| |||| |||||||| | |||| | || | ||||||||||||    
T  35132855 tcttttaatctaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 35132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 287
Target Start/End: Complemental strand, 45350048 - 45349938
Alignment:
Q  176 gggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggct 275  Q
    |||||||||||||||||||||||| |||| |||||||  ||||| ||||||||||| || |||||| || |||||||||||||||||| ||||  ||| |    
T  45350048 gggttggttttaggtcattttttgacctagaatcacccatctacttcttttttcct-ttttctttcaatttaaataagtggttttcacgtataccaggtt 45349950  T
Q  276 tttccttttgtg 287  Q
    ||| ||||||||    
T  45349949 ttttcttttgtg 45349938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 19296712 - 19296797
Alignment:
Q  164 ttcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaat 250  Q
    ||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||| ||||||||    
T  19296712 ttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaat 19296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 22742757 - 22742872
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||| ||| ||||||||| |||||||||| | |||||||||| |||||   ||| ||||||| |||| |||||||||||| ||| |||||| ||||||    
T  22742757 tttcttcctctttcattcatcgaggaggggt-gattttaggtcaatttttaatctagaatcacccctctgcatcttttttcccctt-tctttcaatctaa 22742854  T
Q  249 ataagtggttttcacata 266  Q
    ||||||| ||||||||||    
T  22742855 ataagtgattttcacata 22742872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 333
Target Start/End: Complemental strand, 1749426 - 1749234
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||| ||| |||| |||| |||||||||| | |||||||||| |||||| |||| ||||||| | || |||||||||||| |||     
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacc-cgcttcatcttttttcc-ctt- 1749331  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||| ||||||||||||| |||||||||| || | | |||| |||| |||||||| | |||| | || | |||||||||||| ||| | |||||||    
T  1749330 tctttcaatctaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcg 1749234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 262
Target Start/End: Original strand, 38798575 - 38798717
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||||||||   | ||||||||  || ||||||||||||||||| ||||| ||||    | ||||||||||||||| |||| | || |||||||    
T  38798575 ttttctagtgagaaac--tccaacttctgtctgaactttctttctcattcgttcatcgagg----gatggttttaggtcattctttgacatagaatcacc 38798668  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttca 262  Q
      ||||||||| ||||||| || |||||| || |||||||||||||||||    
T  38798669 catctacatctcttttcct-ttttctttcaatttaaataagtggttttca 38798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 5792667 - 5792735
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||| ||||||||||||||| ||||| ||||||  |||||| || ||||||||||||||||    
T  5792667 cctaaaatcacccctctacatctttttttctcttttctttcattctaaaaaaatggttttcacatatat 5792735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 269
Target Start/End: Complemental strand, 5078707 - 5078548
Alignment:
Q  107 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaa 206  Q
    |||| ||||| |||||||| ||| ||||||||||| ||||  | ||||| || |||| ||||| |||| |||| | ||||||||||||||||| |||| |    
T  5078707 ttcttattttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggt-gattttaggtcattttttgacctaga 5078609  T
Q  207 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||| |||| ||||||| |  |||   | |||| ||||||||||||| |||| ||||||||    
T  5078608 atcacccctctgcatctttct--ctccattatttcgatctaaataagtgatttttacatatat 5078548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 45350500 - 45350434
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggt 179  Q
    ||||||||||||| ||| ||||||||||| ||||||||| |||||| ||| ||||| ||||||||||    
T  45350500 ttttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcatagaggaggggt 45350434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 4529862 - 4530017
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |||| |||||| ||||   ||||||||| |||||||||  | ||| || || ||||||||||||||||| | || || || |    
T  4529862 ttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagagg-tgattttaggtcattttttgacatagaaccatc 4529960  T
Q  213 actctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatat 269  Q
     | ||||||||||||| |||||| |||||| |||||| |||||  |||||||||||||    
T  4529961 ccgctacatcttttttccctctt-tctttcaatctaagtaagtatttttcacatatat 4530017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 269
Target Start/End: Complemental strand, 39329105 - 39328946
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtc-attttttggcctaaaa 207  Q
    ||||||||||||||||| ||| |  ||||| |  |||||||||||||||| ||  ||||| ||||||| | ||| ||||||||  ||||||  |||| ||    
T  39329105 ctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggag-tgggtttaggtctttttttttacctagaa 39329007  T
Q  208 tcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    | |||  ||| |||||||||||| ||| |||||| || ||||||||||||||||||| ||||    
T  39329006 ttacccatctgcatcttttttcc-cttttctttcaatttaaataagtggttttcacacatat 39328946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 48930657 - 48930714
Alignment:
Q  208 tcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    ||||| ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  48930657 tcacccctctacatcttttttcccctt-tctttcaatctaaataagtgattttcacata 48930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 266
Target Start/End: Complemental strand, 24351099 - 24351000
Alignment:
Q  165 tcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcaca 264  Q
    |||| |||||||||| | |||||||||| |||||| |||| ||||||| || | |||| ||||| | ||| |||||| ||||||||||||| ||||||||    
T  24351099 tcatcgaggaggggt-gattttaggtcaatttttgacctagaatcacccctgtgcatccttttttccctt-tctttcaatctaaataagtgattttcaca 24351002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 25255087 - 25255174
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||||||||| |||| ||||||| || | |||| ||||||| ||| |||||| || ||||||||| ||||||||| ||||    
T  25255087 tggttttaggtcattttttgacctataatcacccctttgcatc-tttttcccctt-tctttcaatttaaataagttgttttcacacatat 25255174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 25287318 - 25287262
Alignment:
Q  281 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcgacat 337  Q
    |||||||||||  |||||||| ||||||||||||||||| ||| | |||||||||||    
T  25287318 ttttgtgattttgttgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcgacat 25287262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 40993141 - 40993193
Alignment:
Q  281 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||||||||| | |||||| || |||||||||||||| ||||| |||||||    
T  40993141 ttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcg 40993193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 47590270 - 47590322
Alignment:
Q  281 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||||||||| |||||||| || |||||||||||||| ||| | |||||||    
T  47590270 ttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcg 47590322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 12170277 - 12170450
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| ||| |||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  12170277 ttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 12170375  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | ||||| |||||||    
T  12170376 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtg 12170450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 33053476 - 33053303
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| ||||| |    
T  33053476 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcatc 33053378  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  33053377 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 33053303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 104 - 287
Target Start/End: Original strand, 605977 - 606159
Alignment:
Q  104 aatttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcct 203  Q
    ||||| || |||||||||| || ||| | |||||| || |||||||||||||||| ||| ||||| |||||||||| | ||||| ||||||||||| |||    
T  605977 aatttatagttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggt-gattttatgtcattttttgacct 606075  T
Q  204 aaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |  |||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| |   |||||||||||||    
T  606076 aggatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtg 606159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 3913881 - 3913709
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||  ||||| ||||||||  |||||||||||||||||||| |||| |||||||    
T  3913881 ttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggg--tggttttaggtcattttttgacctagaatcacc 3913784  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||  ||||||||||||  || |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  3913783 cctccgcatcttttttcccattctctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 3913709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 286
Target Start/End: Original strand, 23128421 - 23128572
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 233  Q
    |||||||| |||||||||||||||| ||| |||||||||||||| | | ||||||||||||||||| |||| ||||||| |||||||||||||| ||  |    
T  23128421 aacttctctctaaactttctttctccttcgttcattgaggagggatag-ttttaggtcattttttgacctagaatcacccctctacatctttttccccat 23128519  T
Q  234 tatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    | ||||||  |||||||||||||||||||||| ||| | | ||||||||||||    
T  23128520 tttctttcattctaaataagtggttttcacatctatcaagtttttccttttgt 23128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 269
Target Start/End: Original strand, 30894414 - 30894573
Alignment:
Q  107 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaa 206  Q
    ||||| ||||||| ||||| ||| ||||||||||| ||||||||| |||||| ||| || || |||||||||| |||||||| |||||||||| |||| |    
T  30894414 ttctagttttcta-tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggt-ggttttagatcattttttgacctaga 30894510  T
Q  207 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||| |||||||||| |||| | ||| |||||| |||||||||| ||||||||||||||||    
T  30894511 atcacccctctacatctgtttttcccttttctttcaatctaaataactggttttcacatatat 30894573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 143 - 287
Target Start/End: Original strand, 34018372 - 34018515
Alignment:
Q  143 ctaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcc 242  Q
    |||||||||||||||| ||| ||||| ||||| ||   ||||||||||||||||||| |||| ||||||| |||||||||| ||| ||  || ||||||     
T  34018372 ctaaactttctttctccttcgttcatcgaggatggaa-ggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttca 34018470  T
Q  243 atctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||||||||||||||||||||| | | |||| ||||||||    
T  34018471 atttaaataagtggttttcacatatatcaagttttttcttttgtg 34018515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 68288 - 68136
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac-tctacatcttttttcct 231  Q
    ||||||||| |||||||||||||||| ||| ||||| |||||||| | |||||||||| |||||| | |||| ||||||| | ||||||||||||| ||     
T  68288 caacttctctctaaactttctttctccttcgttcatcgaggagggat-ggttttaggtaattttt-gacctagaatcaccccctctacatctttttccc- 68192  T
Q  232 cttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||| |||||  ||||||||||||||||||||||| ||| | | |||||||||||||    
T  68191 cttttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtg 68136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 287
Target Start/End: Original strand, 127463 - 127625
Alignment:
Q  117 ctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactc 216  Q
    ||||||||| ||||  ||||||||| |||||| || |||||| ||| ||||||||||||||  |||||||||||   ||||||  ||||||||||| |||    
T  127463 ctagtgagagaaatcccaacttctctctaaacgttttttctctttcgttcattgaggaggg--tggttttaggta--tttttgatctaaaatcacccctc 127558  T
Q  217 tacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||||| ||  || |||||||   |||||||||||||||||||||||| | | |||||||||||||    
T  127559 tacatctttttcccattt-tctttcc---taaataagtggttttcacatatatcaagtttttccttttgtg 127625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 32059688 - 32059840
Alignment:
Q  110 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatc 209  Q
    |||||||||||||||| ||||| ||| |||||  ||||| ||||||||| ||||||||| |||||  || |||||||| |||||| |||| |||| ||||    
T  32059688 taattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggatagg-tggttttaagtcattgtttgacctagaatc 32059786  T
Q  210 accactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    | |  |||||||||||||  | ||| |||||| |||||||||||| ||||||||||    
T  32059787 atccttctacatcttttt--cccttttctttcaatctaaataagtagttttcacat 32059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 29320150 - 29320037
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    |||||||||  ||||||||||||||| ||| ||||| ||||| |||| ||||||||||||| |||||  ||| ||||||| ||||||||||||||||| |    
T  29320150 caacttctctttaaactttctttctccttcgttcatcgaggatgggt-ggttttaggtcatattttgatctagaatcacccctctacatcttttttcccc 29320052  T
Q  233 ttatctttccatcta 247  Q
    || |||||| |||||    
T  29320051 ttttctttcaatcta 29320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 261
Target Start/End: Complemental strand, 29255754 - 29255603
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    |||| |||||||||||| ||||| ||||||||| | ||||| |||||||| ||| ||||| || |||  || ||||||| |||||| ||||  |||||||    
T  29255754 ctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgt-ggttttatgtcattctttgatctaaaat 29255656  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttc 261  Q
    ||    ||||||||||||| || ||| |||||| |||||||||||||||||||    
T  29255655 cattcatctacatctttttcccccttttctttcaatctaaataagtggttttc 29255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 265
Target Start/End: Complemental strand, 7515490 - 7515358
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcct 231  Q
    ||||||||| |||||||| ||||||| ||| ||||| |||||||||| |||||||| | ||||||| | |||| ||||||| |||||||| || || ||     
T  7515490 caacttctctctaaacttgctttctctttcgttcatcgaggaggggt-ggttttagattatttttttgacctagaatcacccctctacattttgttcccc 7515392  T
Q  232 cttatctttccatctaaataagtggttttcacat 265  Q
     || |||| | |||||||||||||||||||||||    
T  7515391 tttttcttccaatctaaataagtggttttcacat 7515358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 32192004 - 32191885
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||||||| |||||||||  ||||||||| ||||||||||| |||||||  ||| |||||||  ||| ||||||||| || ||| | |||| ||||||    
T  32192004 tttctttctctttcattcatcaaggaggggt-ggttttaggtccttttttgatctacaatcacccttctgcatctttttcccccttttatttcgatctaa 32191906  T
Q  249 ataagtggttttcacatatat 269  Q
    ||||||| |||  ||||||||    
T  32191905 ataagtgatttctacatatat 32191885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 32328891 - 32328793
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |  |||||||| ||| |||||||||||| ||| ||||| ||||||||| |||||||| |||| |||||| |||| |||||||    
T  32328891 ttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggagggg-tggttttaagtcagtttttgacctataatcacc 32328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 32327422 - 32327352
Alignment:
Q  217 tacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||| ||| |||||| || |||||||||||||||||||| ||| | | |||||||||||||    
T  32327422 tacatcttttttccccttttctttcaatataaataagtggttttcacatctatcaagtttttccttttgtg 32327352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 30608754 - 30608667
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||||||| | |||| ||||||| |||||||| |||||  | ||| |||||| |||||||| ||||||||||||||||||    
T  30608754 tggttttaggtcattttt-gacctagaatcacccctctacatatttttctc-cttttctttcaatctaaattagtggttttcacatatat 30608667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 9721821 - 9721763
Alignment:
Q  110 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcat 168  Q
    |||||||||||||||| ||| | ||||||||| |||||||||||||||| ||| |||||    
T  9721821 taattttctagtgagagaaactccaacttctctctaaactttctttctcgttcgttcat 9721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 9723687 - 9723602
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcat-tgaggaggggttggttttaggtcatttttt 198  Q
    ||||||||||| | ||| | ||||||||| |||||||||||||||| ||| |||||  ||||||||| |||||||||||| ||||||    
T  9723687 ttttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggagggg-tggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 11321668 - 11321604
Alignment:
Q  223 ttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||| || || |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  11321668 tttttttctattttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtg 11321604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 34222653 - 34222731
Alignment:
Q  189 gtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||||||  |||| ||||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||  ||||||||    
T  34222653 gtcattttttaacctagaatcacccctctacatc-tttttcccctt-tctttcgatctaaataagtggtttcaacatatat 34222731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 264
Target Start/End: Complemental strand, 4010803 - 4010660
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| |||| |||||| ||||  |||||||||| || ||| |||||||||| || |  ||||| |||||||||| |||| ||||||| ||||    
T  4010803 tagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagt-gactttagatcattttttgacctagaatcacccctct 4010705  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcaca 264  Q
       ||||||||  || | |||||| || ||||||| |||||||||||    
T  4010704 gtgtctttttt--tcatttctttcaatttaaataaatggttttcaca 4010660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 545843 - 545957
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||| ||| |||| |||| |||||||||| | ||||||| ||||||| | |||| ||||||   |||||||||||||||| ||| |||||| ||||||    
T  545843 tttcttcctctttcactcatcgaggaggggt-gattttaggccattttt-gacctagaatcactcttctacatcttttttcccctt-tctttcaatctaa 545939  T
Q  249 ataagtggttttcacata 266  Q
    |||||   ||||||||||    
T  545940 ataagcaattttcacata 545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 31852474 - 31852370
Alignment:
Q  121 tgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctaca 220  Q
    ||||| ||| || ||||||||  ||| || ||||||||||| | ||||  ||||||||| |||||||||| ||| ||| |||||||||||||  ||| ||    
T  31852474 tgagataaactttaacttctctttaagctctctttctcatttactcatcaaggaggggt-ggttttaggttattgtttagcctaaaatcacccatctgca 31852376  T
Q  221 tctttt 226  Q
    ||||||    
T  31852375 tctttt 31852370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 1523259 - 1523339
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||||||||| |||||| |||| ||||||| |||| ||| |||||  ||||| |||||| ||||||||||||| ||| ||||||    
T  1523259 ttttaggtcaatttttgacctagaatcacc-ctctgcattttttt--ctcttttctttcaatctaaataagtgatttccacata 1523339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 24227954 - 24227864
Alignment:
Q  180 tggttttaggtcattttttgg--cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||||||||    | |||||||| | |||||||||||||  || ||| |||||| |  ||||||||||||||||||||||||    
T  24227954 tggttttaggtcatttttttttacataaaatcagccctctacatcttttcccccctt-tctttcaacttaaataagtggttttcacatatat 24227864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 2520578 - 2520751
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  2520578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 2520676  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| || ||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  2520677 cctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 2520751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 333
Target Start/End: Original strand, 54021662 - 54021889
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| ||||| ||||| |||||||||||||||  ||||||||| ||||  | || ||||||||||||||||||| | |||||||| |    
T  54021662 ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagt-ggttttaggtcattttttgacataaaatcatc 54021760  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttcattgtctaattg 304  Q
     ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||   | ||||||        |||||||||||| |||||||||||    
T  54021761 cctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatccagtttttccttttgtgtttttgtgatttcgttgtctaattg 54021860  T
Q  305 tggcgttgtgttgttagtcatattgtgcg 333  Q
     ||| |||||||||||||| | |||||||    
T  54021861 cggcattgtgttgttagtcgtcttgtgcg 54021889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 21686548 - 21686376
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| || |||||||| |||||||||||||||| ||  ||||| |||||||||| ||||| ||||| ||||||| ||||||||||||    
T  21686548 ttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggt-ggtttgaggtc-ttttttgacctaaaatcacc 21686451  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  21686450 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 21686376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 5119139 - 5119313
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 211  Q
    ||||||||||||| ||||||||||||||  ||||||||| |||||| |||||||||  ||||||||| ||||||| ||||||||||   |||| ||||||    
T  5119139 ttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggt-ggttttatgtcattttttttacctagaatcac 5119237  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | |||||||||||||| || ||  |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  5119238 ccctctacatctttttccccctcttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 5119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 26633978 - 26633806
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||||||||||||||| |||| |||||||    
T  26633978 ttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggt-ggtcttaggtcattttttgacctagaatcacc 26633880  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     || ||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  26633879 cctatacatcttttt-cctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 26633806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 19853819 - 19853669
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||| | ||||||||| |||||||||| ||||||||||||||||| | |||| |||||||    
T  19853819 ttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggt-ggttttaggtcattttt-gacctagaatcacc 19853722  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
     ||||||||||||||||| ||| |||| | |||||||||||||||||||||||    
T  19853721 cctctacatcttttttccccttttcttccaatctaaataagtggttttcacat 19853669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 137 - 287
Target Start/End: Complemental strand, 22558749 - 22558599
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc-tta 235  Q
    ||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||||| | ||     
T  22558749 ttctctctaaactttctttctccttcgttcattgaggaggggt-ggttttaggtcattttttgacatagaatcacctctctacatcttttttcccctttt 22558651  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  22558650 tctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 22558599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 4143042 - 4142890
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    |||||||||  ||||||||||||||| ||  ||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||| |    
T  4143042 caacttctctataaactttctttctcctttgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatcttttttcccc 4142944  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| |||||||||||| |||||||||| ||| | | |||||||||||||    
T  4142943 ttttctttcaatctaaataagt-gttttcacatctatcaagtttttccttttgtg 4142890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 22611005 - 22611157
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| ||| | |||||||||| ||||||||||||||||| | |||| |||||||  |||||||||||||||| |    
T  22611005 caacttctctctaaactttctttctccttcgttcgtcgaggaggggt-ggttttaggtcattttt-gacctagaatcacccatctacatcttttttcccc 22611102  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||||||||||||| ||| | | || ||||||||||    
T  22611103 ttttctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtg 22611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 53810829 - 53811002
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | || |||||| |||||||||||| ||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  53810829 ttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctataatcacc 53810927  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||||||||||||| || ||| |||||| || |||||||||| ||||||||| ||| | | | |||||||||||    
T  53810928 cctctacatctttttcccccttttctttcaatttaaataagtgattttcacatctatcaagttattccttttgtg 53811002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 268
Target Start/End: Complemental strand, 9165351 - 9165196
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcat-tttttggcctaaaatcac 211  Q
    |||||| |||||| ||| | ||||||||| ||||||||||||| ||  |||||||| |||||| ||| ||||||||||||| |||||  |||| ||||||    
T  9165351 ttttcttgtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggt-ggttttaggtcatattttttacctagaatcac 9165253  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatata 268  Q
    | ||||||||||||||  | |||||||||| ||||||||||||||||||||||||||    
T  9165252 ccctctacatctttttctcccttatctttcaatctaaataagtggttttcacatata 9165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 45418330 - 45418500
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||| |||||||| ||||||||||| |||||  || |||||| | ||||||| ||||||    |||||||||||||||||||| |||| ||||| |    
T  45418330 ttttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag----tggttttaggtcattttttgacctagaatcatc 45418425  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||| || |||||||||| ||| || || |||||||| ||||||||||||||| | | |||||||||||||    
T  45418426 cctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaagtttttccttttgtg 45418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 35348107 - 35348261
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||| | ||| | |||||||||  |||||||| |||||| |||  |||| | |||||||| | ||||||||||||||||| |||| |||||||    
T  35348107 ttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggt-gattttaggtcattttttgacctagaatcacc 35348205  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     ||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||    
T  35348206 tctctacatcttttttcc-cttttctttcaatctaaataagtggttttcacaaatat 35348261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 268
Target Start/End: Original strand, 9178158 - 9178312
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||| |||||| ||| ||||  ||||| ||||| |||||||||| |||||||||  ||||||||| ||| ||||||||||||||| |||| |||||||    
T  9178158 ttttctggtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggt-ggtcttaggtcattttttgacctagaatcacc 9178256  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatata 268  Q
      |||||||||||||  | ||| |||||| |||||||||| |||||||||||||||    
T  9178257 cttctacatctttttctcccttttctttcaatctaaataaatggttttcacatata 9178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 32766355 - 32766485
Alignment:
Q  153 tttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataa 252  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||| |||||| |||    
T  32766355 tttctccttcgttcattgag-agggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaa 32766453  T
Q  253 gtggttttcacatatataaggcttttcctttt 284  Q
    ||| ||||||||| ||| | | ||||||||||    
T  32766454 gtgtttttcacatctatcaagtttttcctttt 32766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 286
Target Start/End: Complemental strand, 26091222 - 26091050
Alignment:
Q  112 attttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcac 211  Q
    ||||| |||||||| ||| | ||||||||| |||||| ||||||||| ||||||||| ||||| | || | |||||||| |||||||| |||| ||||||    
T  26091222 attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagt-gattttaggttattttttgacctagaatcac 26091124  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    | ||||| ||||||||||  ||| | |||| |||||||||||||||||||||||| || | | ||||||||||||    
T  26091123 ccctcta-atcttttttctccttttatttcaatctaaataagtggttttcacataaatcaagtttttccttttgt 26091050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 291
Target Start/End: Original strand, 10496143 - 10496316
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||  |||||||||||| ||| ||| ||||| ||||||| | ||||||||||||| |||||| |||| |||||||    
T  10496143 ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtg-tggttttaggtcaatttttgacctagaatcacc 10496241  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
     || ||||||||||||||  || |||||  ||||||||||||||||||||||   || | | |||||||||||||||||    
T  10496242 -ctatacatcttttttcccattttcttttaatctaaataagtggttttcaca---atcaagtttttccttttgtgattt 10496316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 283
Target Start/End: Original strand, 43510018 - 43510169
Alignment:
Q  131 ttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 230  Q
    |||||||||||  ||||||||| ||||| ||| ||||| || || |||| ||||||||||||||||||| |||| ||||||  ||||||||||||||| |    
T  43510018 ttcaacttctctttaaactttcattctccttcgttcatcgaagaagggt-ggttttaggtcattttttgacctagaatcactcctctacatctttttttc 43510116  T
Q  231 tcttatctttccatctaaataagtggttttcacatatataaggcttttccttt 283  Q
     ||| |||||| |||||||||||||| |||||||| ||| | | |||||||||    
T  43510117 ccttttctttcaatctaaataagtggctttcacatttatcaagtttttccttt 43510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 13633915 - 13634089
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| |||  |||| |||||| || ||||||||||||| |||||| | || |||||||    
T  13633915 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtgg-tggttttaggtca-tttttgacatagaatcacc 13634012  T
Q  213 actctacatctttt--ttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||||||||||||    || ||| |||||| ||||||||||||||||||||||| ||| | | |||| ||||||||    
T  13634013 cctctacatcttttccccccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg 13634089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 24099379 - 24099227
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 211  Q
    ||||||||||| | ||| || || ||||| |||||||||||||||  | | ||||| |||||| ||| |||||||||||||||||| | |||| |||||     
T  24099379 ttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggt-ggttttaggtcatttttttgacctagaatcat 24099281  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    | ||||||||||||||||| ||| |||||| ||||||||||||| |||||||||    
T  24099280 ccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 24099227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 48257757 - 48257647
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||||||| | |||||||||  ||||||||||||||||||| | ||| ||||||||| |||||||| ||||||||||| |||| |||||||    
T  48257757 ttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggagggg-tggttttatgtcattttttgacctagaatcacc 48257659  T
Q  213 actctacatctt 224  Q
      ||||||||||    
T  48257658 catctacatctt 48257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 43095471 - 43095586
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttt--ttcctcttatctttccatct 246  Q
    |||||||||| ||||||| ||||||| |||| | |||||||||||||||      ||||||||| |||||||||||||  |||||||| |||||| ||||    
T  43095471 tttctttctccttcattcgttgaggaagggtag-ttttaggtcattttt------aaaatcacccctctacatcttttttttcctcttttctttcaatct 43095563  T
Q  247 aaataagtggttttcacatatat 269  Q
    |||||||||||||||||||||||    
T  43095564 aaataagtggttttcacatatat 43095586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 265
Target Start/End: Complemental strand, 56040915 - 56040801
Alignment:
Q  152 ctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcctcttat-ctttccatctaaa 249  Q
    ||||||| ||| |||| ||||||| ||| |||||||||||||||||| | |||| ||||||| ||||||||||||||||| ||| | ||||| |||||||    
T  56040915 ctttctccttcgttcactgaggagaggt-ggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaa 56040817  T
Q  250 taagtggttttcacat 265  Q
    ||||||||||||||||    
T  56040816 taagtggttttcacat 56040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 47320709 - 47320537
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| |||||||||||  |||  |||| ||||| |||  |||| ||| |||||| |||||||||||||| |||| | |||||||||     
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggt-ggttttaggtcattctttgacttaaaatcaca 47320611  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||| |||||||||||| ||| || ||| ||||||||||||| |||||||| |||| | || ||| ||||||||    
T  47320610 actctgcatcttttttcccctt-tcgttcgatctaaataagtgattttcacaaatatcaagcgttttcttttgtg 47320537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 10259136 - 10259048
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||||| ||||| |||||| ||||||| || ||||||||||||||||    
T  10259136 tggttttaggtcattttt-gacctaaaatcacccctctacatcgttttttctcttttctttcgatctaaacaaatggttttcacatatat 10259048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 53443932 - 53444070
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| ||||||||||| ||||||||| |||||| ||| ||||||||||| | ||||||||||||||| |||||| |||| || |||| ||||    
T  53443932 tagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgagga-gcgttggttttaggtca-tttttgacctagaaacacccctct 53444029  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttt 259  Q
    |||| ||||||  |||| | |||| || ||||||||||||||    
T  53444030 acat-tttttttgtcttttatttcaatttaaataagtggttt 53444070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 22300666 - 22300800
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||| ||| |||||| |||| || | ||||||| || ||||||||||||||||||| |||||||||||| || | |||| ||||| |||    
T  22300666 caacttctctctaaattttatttctctttcactcgtcgaggaggagt-ggttttaggtcattttttgacctaaaatcacccctttgcatccttttt-ctc 22300763  T
Q  233 ttatctttccatctaaataagtggttttcacatatat 269  Q
    || |||||| || |||||||||| ||||||| |||||    
T  22300764 ttttctttcaatttaaataagtgattttcacgtatat 22300800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 33920853 - 33921025
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtca-ttttttggcctaaaatcac 211  Q
    |||| |||||||| ||| |||||||| || |||||||||||||||  ||||||||| ||| | ||| ||||||||||||| ||||||  || |||| |||    
T  33920853 ttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatggg-tggttttaggtcatttttttaacccaaaagcac 33920951  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |  |||||||||||||| | ||| |||||| |  |||||||||| ||||||||||||| | | |||| ||||||||    
T  33920952 ccatctacatctttttttcccttttctttcaa--taaataagtgattttcacatatatcaagttttttcttttgtg 33921025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 40066262 - 40066190
Alignment:
Q  215 tctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||| | | | |||||||||||||    
T  40066262 tctacatcttttttcctcttttctttcaatataaataagtggttttcacatattttaagtttttccttttgtg 40066190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 266
Target Start/End: Original strand, 27651745 - 27651900
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    |||||||| |||||||| |||||    |||||| ||||| |||||| ||| |||| |||| |||||||||| | | |||||||| |||||| ||||  ||    
T  27651745 ctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggt-gatgttaggtcaatttttgacctaggat 27651843  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    ||||  ||| ||||||||||||  || |||||| ||||||||||||| ||||||||||    
T  27651844 cacccatctgcatcttttttcccatt-tctttcaatctaaataagtgattttcacata 27651900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 51888488 - 51888370
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||||||| |||| |||| |||||||||| ||||||||||||||||||| | |  ||||||| ||||  ||||||| ||| ||| |||| | ||||||    
T  51888488 tttctttctctttcactcatcgaggaggggt-ggttttaggtcattttttgacattgaatcacccctctcaatcttttatcccctt-tcttccgatctaa 51888391  T
Q  249 ataagtggttttcacatatat 269  Q
    | ||||| |||||||||||||    
T  51888390 acaagtgattttcacatatat 51888370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 21231678 - 21231604
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtg 255  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||||||| ||||| ||||||  ||||||||||||    
T  21231678 tggttttaggtcattttttgatctaaaatcacctctctccatctttttttctctt-tctttcattctaaataagtg 21231604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 29961243 - 29961060
Alignment:
Q  107 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaa 206  Q
    |||||| |||||| ||||| ||| | ||||||||| ||||||||||||| || ||  ||||| || || ||| || |||||||| |||||||| | || |    
T  29961243 ttctaactttctaatgagagaaactccaacttctctctaaactttctttttcctttgttcatcgaaga-gggatgattttaggttattttttgacataga 29961145  T
Q  207 atcaccactctacatcttttttcc----tcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||  ||||| ||||||||||    | || | |||| ||||||||||||| ||||||||| ||| | | |||||||||||||    
T  29961144 atcacccatctacttcttttttccttttttttttttttcaatctaaataagtgattttcacatctatcaagtttttccttttgtg 29961060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 333
Target Start/End: Original strand, 36194511 - 36194731
Alignment:
Q  110 taattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatc 209  Q
    ||||||| |||||||| ||||||   |||||| ||||  |||||| ||| |||| | || ||||| |||| | |||||| ||| |||||| ||||||| |    
T  36194511 taattttttagtgagagaaattttgtcttctctctaagttttcttcctctttcacttatcgaggatgggt-gattttagatcaatttttgacctaaaaac 36194609  T
Q  210 accactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcg 309  Q
    | | |||| |||||||||| ||| | |||||| || |||||||||| |||||||||| || | | |||| |||| |||||||| |||||| | || | ||    
T  36194610 atccctctgcatctttttt-ctcctttctttcaatttaaataagtgattttcacatacatcaag-tttttctttcgtgatttcgttgtcttagtgcgacg 36194707  T
Q  310 ttgtgttgttagtcatattgtgcg 333  Q
    |||||||||| ||| | |||||||    
T  36194708 ttgtgttgttcgtcgtcttgtgcg 36194731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 21225417 - 21225344
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagt 254  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||||||||| ||| ||||||  |||||||||||    
T  21225417 tggttttaggtcattttttgatctaaaatcacctctctccatcttttttcccctt-tctttcattctaaataagt 21225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 287
Target Start/End: Complemental strand, 22039070 - 22038936
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||||||| |||| |||| ||| |||||| |||||||||||| |||| |  ||| ||||||| || | |||||||||||| ||| |||||| ||||||    
T  22039070 tttctttctctttcactcatcgagcaggggt-ggttttaggtcaattttggatctagaatcacc-ctttgcatcttttttcc-ctt-tctttctatctaa 22038975  T
Q  249 ataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||| ||||||||| ||| | | |||| ||||||||    
T  22038974 ataagtgattttcacatctatcaagttttttcttttgtg 22038936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 9713796 - 9713863
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||| ||||||  ||||||||||||||||| ||| |||||| ||||||||||||| ||| |||||||||    
T  9713796 cctagaatcacttctctacatcttttttcccctt-tctttcaatctaaataagtgatttccacatatat 9713863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 22064019 - 22063948
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtg 255  Q
    ||||||||||||||||| |||| ||||||| |||| ||| |||||| ||| | |||||| |||||||||||||    
T  22064019 ttttaggtcattttttgacctagaatcacccctctgcatatttttt-ctcctttctttcaatctaaataagtg 22063948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 9634580 - 9634630
Alignment:
Q  219 catcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||| ||| | |||||| ||||||||||||| |||||||||||||    
T  9634580 catctttttttctcatttctttcgatctaaataagtgattttcacatatat 9634630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 40066317 - 40066265
Alignment:
Q  145 aaactttctttctcattcattcattgaggaggggttggttttaggtcatttttt 198  Q
    |||||||||||||||||| ||||||||   |||| |||||||||||||||||||    
T  40066317 aaactttctttctcattcgttcattgaattgggg-tggttttaggtcatttttt 40066265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 29121920 - 29121876
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatctt 224  Q
    |||||||||||||||||||| |||||||||||   ||||||||||    
T  29121920 tggttttaggtcattttttgacctaaaatcactcatctacatctt 29121876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 56156841 - 56156782
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcat 193  Q
    ||||||||| ||||||||||||||| |||| |||||  |||| ||| ||||||||||||||    
T  56156841 caacttctctctaaactttctttcttattcgttcatcaaggatggg-tggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 31013877 - 31013726
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  31013877 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 31013779  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
     |||||||||||||| || ||| |||||| |||||||||||||||||||||||    
T  31013778 cctctacatctttttcccccttttctttcaatctaaataagtggttttcacat 31013726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 27110770 - 27110597
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||||||||| || || |||| |||||||||||||||||||  ||||||||||     
T  27110770 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggt-ggttttaggtcattttttgatctaaaatcaca 27110672  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
      |||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||| | | |||||||||||||    
T  27110671 catctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaagtttttccttttgtg 27110597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 333
Target Start/End: Original strand, 37971072 - 37971294
Alignment:
Q  107 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaa 206  Q
    ||||| ||||||| ||||| ||| | ||||||||| ||||| |||||||||  ||||||||| ||||||    |||||||||||||||||||| |||| |    
T  37971072 ttctagttttctaatgagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag----tggttttaggtcattttttgacctaga 37971167  T
Q  207 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtg 306  Q
    |||||| ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||  | | | |||||||||||||||| | |||||| || |    
T  37971168 atcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctaccaagttgttccttttgtgatttcgtcgtctaagtgcg 37971267  T
Q  307 gcgttgtgttgttagtcatattgtgcg 333  Q
    ||||| ||||||| ||| | |||||||    
T  37971268 gcgttttgttgttcgtcgtcttgtgcg 37971294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 325
Target Start/End: Original strand, 28897502 - 28897712
Alignment:
Q  121 tgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctaca 220  Q
    ||||| ||| ||||||||||   |||||| || ||||  ||||||| | |||||||||| ||||||| |||||||||||  ||||||||||| |||||||    
T  28897502 tgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggt-ggttttaagtcattttttgatctaaaatcacccctctaca 28897600  T
Q  221 tcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc--------ttttgtgatttcattgtctaattgtggcgttg 312  Q
    |||||||||||||| |||||| ||||||||||||||||||||  ||||| | | ||||||        |||||||||||| ||||||||||| | |||||    
T  28897601 tcttttttcctcttttctttcaatctaaataagtggttttcatgtatatcaag-ttttcctatgatgtttttgtgatttcgttgtctaattgcgacgttg 28897699  T
Q  313 tgttgttagtcat 325  Q
    |||||||||||||    
T  28897700 tgttgttagtcat 28897712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 10377480 - 10377623
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||| || ||||    
T  10377480 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggtcattttttgacctagaa-cacc 10377577  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggtt 258  Q
    | ||||||||||||| || ||| |||||| ||||||||||||||||    
T  10377578 aatctacatctttttcccccttctctttcaatctaaataagtggtt 10377623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 23230447 - 23230600
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||| ||||  ||||||||||| |||||| || ||||||||| ||||||||||||||||| |    
T  23230447 caacttctctctaaactttctttctccttcgttcatcgaggatgggt--gttttaggtcaatttttgaccaaaaatcacccctctacatcttttttcccc 23230544  T
Q  233 -ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     || |||||| |||||||||||||||||||| || ||| | | |||| ||||||||    
T  23230545 tttttctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtg 23230600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 14545143 - 14545036
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcacca-ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggctttt 278  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |   ||||    
T  14545143 tggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaaaatttt 14545044  T
Q  279 ccttttgt 286  Q
    ||||||||    
T  14545043 ccttttgt 14545036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 118 - 265
Target Start/End: Complemental strand, 7883541 - 7883395
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| ||||||||||  ||||| |||||||||||||| ||||| || || | || ||||||||||||||||| |  ||| ||||||| ||||    
T  7883541 tagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagt-ggttttaggtcattttt-gatctataatcacccctct 7883444  T
Q  218 acatcttttttcc-tcttatctttccatctaaataagtggttttcacat 265  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  7883443 acatcttttttccctcttttctttcaatctaaataagtggttttcacat 7883395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 8980980 - 8981121
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| |||||||||| || | |||||||||| ||||||||||||||||||| ||||||||||||    
T  8980980 ttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggt-ggttttaggtcattttttgacctaaaatcacc 8981078  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtg 255  Q
     || | |||| ||||||| ||| |||||| |||||||||||||    
T  8981079 cctatgcatcctttttccccttttctttcaatctaaataagtg 8981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 3673247 - 3673381
Alignment:
Q  131 ttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 230  Q
    ||||||||||| |||||||||||||||| || |||||| || || ||||||||||||||||| |||||| |||| ||||| | ||||||||| |||| ||    
T  3673247 ttcaacttctctctaaactttctttctcctttattcatcgaaga-gggttggttttaggtca-tttttgacctagaatcatccctctacatc-ttttgcc 3673343  T
Q  231 tcttatctttccatctaaataagtggttttcacatata 268  Q
     ||| |||||| |||||||||||||||| |||||||||    
T  3673344 ccttttctttcaatctaaataagtggttatcacatata 3673381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 264
Target Start/End: Complemental strand, 25191378 - 25191223
Alignment:
Q  107 ttctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaa 206  Q
    ||||| |||| |||||||| ||| | ||||||||| |||||||||||||||| ||  ||||| |||||| ||| | ||||||||||||||||| |||| |    
T  25191378 ttctagttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggt-gattttaggtcattttttgacctaga 25191280  T
Q  207 atcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcaca 264  Q
    ||||||  |||||||||||||||| ||| |||||| |  |||||||||| ||||||||    
T  25191279 atcacccatctacatcttttttcc-cttttctttcaaattaaataagtgattttcaca 25191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 40211612 - 40211460
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 211  Q
    ||||||||||||| ||| | ||| |||||  |||| |||||||||| ||| || || |||||||||| || ||||||| ||||||| | |||| ||||||    
T  40211612 ttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggt-ggctttaggtaatttttttgacctagaatcac 40211514  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    | ||||||||||||||| ||||| |||||| ||||||||||| |||||||||||    
T  40211513 ccctctacatcttttttactcttttctttcaatctaaataagcggttttcacat 40211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 137 - 332
Target Start/End: Complemental strand, 7677562 - 7677362
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 236  Q
    ||||| ||||| |||||||||  ||| |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||  ||  || || |    
T  7677562 ttctctctaaattttctttcttcttcgttcattgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatctcattcact-tttt 7677465  T
Q  237 ctttccatctaaataagtggttttcacatatataaggcttt-------tccttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattg 329  Q
    ||||| |||||||||| | |||||||||||||| | | |||       |  |||||||||||||| ||||||||| |||||||||||||| ||| | |||    
T  7677464 ctttcgatctaaataaattgttttcacatatatcaagttttgtttttgtgtttttgtgatttcatcgtctaattgcggcgttgtgttgttcgtcgtcttg 7677365  T
Q  330 tgc 332  Q
    |||    
T  7677364 tgc 7677362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 17693919 - 17693805
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||| |||| ||||| |    
T  17693919 ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtt-gttttaggtca-tttttgacctagaatcatc 17693822  T
Q  213 actctacatcttttttc 229  Q
     ||||||||||||||||    
T  17693821 cctctacatcttttttc 17693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 45446117 - 45445963
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| ||||| ||| | |||||| ||||||||||| | || ||||| |    
T  45446117 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaaggg-tagttttatgtcattttttgacatagaatcatc 45446019  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     ||||||||||||||||| ||| | |||| || ||| ||||||||||||||| ||||    
T  45446018 tctctacatcttttttcc-cttttatttcaatttaattaagtggttttcacacatat 45445963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 286
Target Start/End: Complemental strand, 20560030 - 20559880
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||||||| |||||  ||| ||||| || ||||||| |||||||| |||||||| | |||| ||||||| ||||||||  ||||||| |    
T  20560030 caacttctctctaaactttttttcttcttcgttcatcgatgaggggt-ggttttagatcatttttggacctagaatcacccctctacat--tttttcccc 20559934  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    || |||||| ||||||||||||| ||||||||| ||| | | ||||||||||||    
T  20559933 ttttctttcaatctaaataagtgattttcacatctatcaagtttttccttttgt 20559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 286
Target Start/End: Complemental strand, 20571592 - 20571442
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||||||| |||||  ||| ||||| || ||||||| |||||||| |||||||| | |||| ||||||| ||||||||  ||||||| |    
T  20571592 caacttctctctaaactttttttcttcttcgttcatcgatgaggggt-ggttttagatcatttttggacctagaatcacccctctacat--tttttcccc 20571496  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    || |||||| ||||||||||||| ||||||||| ||| | | ||||||||||||    
T  20571495 ttttctttcaatctaaataagtgattttcacatctatcaagtttttccttttgt 20571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 144 - 269
Target Start/End: Original strand, 29937929 - 29938052
Alignment:
Q  144 taaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcca 243  Q
    ||||||||||||||  ||| ||||||||||| |||| |||||||| |||||||| | |||| ||||||| ||||||||||||||||  ||| |||||| |    
T  29937929 taaactttctttctacttcgttcattgaggatgggt-ggttttagatcattttt-gacctagaatcacccctctacatcttttttcgccttttctttcaa 29938026  T
Q  244 tctaaataagtggttttcacatatat 269  Q
     |||||||||||||||||| ||||||    
T  29938027 cctaaataagtggttttcatatatat 29938052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 287
Target Start/End: Complemental strand, 1239703 - 1239537
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 218  Q
    ||||||| ||| ||||||||||| ||||  |||| ||||| | |  |||| |||||||||| ||||||||||| || |||| |||||||||||| ||||     
T  1239703 agtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggt-ggttttaggtccttctttgacctaaaatcacccctctg 1239605  T
Q  219 catcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||| ||| || ||| ||||||||||||| |||||||| |||| |||  ||| ||||||||    
T  1239604 catcttttttcccctt-tcgttcgatctaaataagtgattttcacaaatatcaggtgttttcttttgtg 1239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 20553531 - 20553379
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    |||||||||  |||||||| |||||  ||| ||||| |||||||||| |||||||| |||||||| | |||| ||||||| | | |||| |||||||| |    
T  20553531 caacttctctttaaactttttttcttcttcgttcatcgaggaggggt-ggttttagatcatttttggacctagaatcaccccacaacattttttttcc-c 20553434  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||| ||||||||| ||| | | |||||||||||||    
T  20553433 ttttctttcaatctaaataagtgattttcacatctatgaagtttttccttttgtg 20553379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 291
Target Start/End: Original strand, 15344094 - 15344265
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| | ||||||||| ||||  |||  ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  15344094 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaattacccctct 15344192  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
     |||||||||||| ||| | | |  ||||||||||||| |||||||| |||| | || ||| ||||||||||||    
T  15344193 gcatcttttttcccctt-tatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattt 15344265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 291
Target Start/End: Original strand, 15433159 - 15433330
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| | ||||||||| ||||  |||  ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  15433159 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaattacccctct 15433257  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
     |||||||||||| ||| | | |  ||||||||||||| |||||||| |||| | || ||| ||||||||||||    
T  15433258 gcatcttttttcccctt-tatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattt 15433330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 291
Target Start/End: Original strand, 15524463 - 15524634
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| | ||||||||| ||||  |||  ||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||| ||| ||||    
T  15524463 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaattacccctct 15524561  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
     |||||||||||| ||| | | |  ||||||||||||| |||||||| |||| | || ||| ||||||||||||    
T  15524562 gcatcttttttcccctt-tatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattt 15524634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 1236999 - 1236883
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| ||||||||||| ||||  |||| ||||| |||  ||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  1236999 ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggt-ggttttaggtcattctttgacctaaaataatc 1236901  T
Q  213 actctacatcttttttcc 230  Q
     |||| ||||||||||||    
T  1236900 cctctgcatcttttttcc 1236883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 8412655 - 8412571
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcatttttt 198  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||    
T  8412655 ttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtagggg-tggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 266
Target Start/End: Complemental strand, 24099567 - 24099417
Alignment:
Q  112 attttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcac 211  Q
    ||||| |||||||| ||| ||||||||||| |||   |||||||||| |||| |||| ||| ||||  ||| ||||||||| |||||| |||| ||||||    
T  24099567 attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg--tggctttaggtca-tttttgacctagaatcac 24099471  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    | |||| ||| || ||||||||| |||||| || |||||||||| ||| ||||||    
T  24099470 ccctctgcattttgtttcctctt-tctttcgatttaaataagtgatttccacata 24099417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 24186878 - 24186792
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||||| | ||||||||||||||| |||| |||||  ||||||||||||| |||||| |||||| | | |||| ||||||||    
T  24186878 cctaaaatcactattctacatcttttttcatcttttctttaaatctaaataagtgattttcatatatatcaagtttttgcttttgtg 24186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 14585569 - 14585634
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||| ||||||| |||| |||||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  14585569 cctagaatcacccctctgcatctttttttctcttttctttcaatctaaataagtgattttcacata 14585634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 29617763 - 29617665
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||||||||||||||| ||||| ||| |||||| |||| | || || |||  ||| |||||||||||||||||| |||| |||||||    
T  29617763 ttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgtt-gttttaggtcattttttgacctacaatcacc 29617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 269
Target Start/End: Complemental strand, 33214930 - 33214783
Alignment:
Q  120 gtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtc-attttttggcctaaaatcaccactcta 218  Q
    |||||| ||| ||||| ||||| |||||||||||||||| ||| ||||| ||||| ||| ||||||||||||  ||||||| | || |||||    ||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatggg-tggttttaggtcttttttttgacttagaatcattcatcta 33214832  T
Q  219 catcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||  | ||| |||||| || |||||||||| ||||| |||||||    
T  33214831 catcttttt--cccttttctttcaatttaaataagtgattttcgcatatat 33214783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 40619307 - 40619206
Alignment:
Q  184 tttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttt 283  Q
    |||||||||||||| | |||| ||||| | |||||||| ||||||| |||| ||| || ||||||||||||| ||||||||||||| | | ||||| |||    
T  40619307 tttaggtcattttt-gacctagaatcatccctctacatattttttc-tcttttctatcaatctaaataagtgattttcacatatatcaagtttttctttt 40619210  T
Q  284 tgtg 287  Q
    ||||    
T  40619209 tgtg 40619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 18890942 - 18890861
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    |||||||||| |||||| |||| ||||||   ||| |||||||||||| ||| |||||| ||||||||||||| |||||||||    
T  18890942 ttttaggtcaatttttgacctagaatcactcatctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacat 18890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 287
Target Start/End: Complemental strand, 36948738 - 36948571
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| |||||||||||  ||||||||||||||| || |||||||   |||||| | |||||||||| ||||||   ||| ||||||| | ||    
T  36948738 tagtgagacaaacttcaacttctctttaaactttctttctcctttattcattatagagggggtagttttaggtcgtttttt-tactataatcacctc-ct 36948641  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
      | | ||||||   || |||||| |||||||||||||||||||| |||||| |   |||||||||||||    
T  36948640 ctagcctttttctcattttctttcaatctaaataagtggttttcatatatatcaaatttttccttttgtg 36948571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 44091986 - 44091881
Alignment:
Q  180 tggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggctttt 278  Q
    ||||||| ||||||||||| | |||| ||||||| ||||||||||||||||    | |||||| |||||||| |||||||||||||| ||| | | ||||    
T  44091986 tggttttgggtcatttttttgacctagaatcacc-ctctacatcttttttcta--tctctttcgatctaaattagtggttttcacatctatcaagttttt 44091890  T
Q  279 ccttttgtg 287  Q
    |||||||||    
T  44091889 ccttttgtg 44091881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 269
Target Start/End: Complemental strand, 8443795 - 8443672
Alignment:
Q  144 taaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttt--tttcctcttatctttc 241  Q
    |||| |||||||||| |||||||||  || |||||| ||||||||||||||||||  | || |||||||| ||| |||||||  ||||| ||| ||||||    
T  8443795 taaattttctttctctttcattcatcaag-aggggt-ggttttaggtcattttttaacttagaatcacca-tctgcatctttcttttcccctt-tctttc 8443700  T
Q  242 catctaaataagtggttttcacatatat 269  Q
     ||||||||||||| ||| |||||||||    
T  8443699 gatctaaataagtgatttccacatatat 8443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 10232851 - 10233024
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||| |||||  ||||||||| ||||||||||||||||||| |||| |||||||    
T  10232851 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggt-ggttttaggtcattttttgacctagaatcacc 10232949  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  10232950 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 10233024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 21431406 - 21431578
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||| | ||||||||||||    
T  21431406 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttt-gacctaaaatcacc 21431503  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     |||||||||||||||||  || |||||| ||||||||||||||||||||||| ||| | | ||||| |||||||    
T  21431504 cctctacatcttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtg 21431578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 47895932 - 47896105
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| |||| ||| |||||||||| |||| |||||||    
T  47895932 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttatagatcattttttgacctagaatcacc 47896030  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||   || |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  47896031 cctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 47896105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 35865241 - 35865087
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| ||| ||| | |||||||||| ||||||||||||||||| |  ||||||||| |    
T  35865241 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggt-ggttttaggtcattttt-gatctaaaatcatc 35865144  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
      |||||||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  35865143 cttctacatcttttttcctcttttctttcaatctaaataagtagttttcacatatat 35865087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 9998247 - 9998397
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg-cctaaaatcac 211  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||| | |||| ||||||    
T  9998247 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcatttttttgacctagaatcac 9998345  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcac 263  Q
    | ||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  9998346 ccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 9998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 286
Target Start/End: Original strand, 54148787 - 54148941
Alignment:
Q  131 ttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 230  Q
    ||||| ||||| |||||||||||||||| ||| |  || |||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  54148787 ttcaatttctctctaaactttctttctccttcgtcaatcgaggaggggt-ggttttaggtcattttttgacctacaatcacccctctacatcttttttcc 54148885  T
Q  231 tcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    |||| |||||| ||||||||||||||||||||||| ||| | | |||| |||||||    
T  54148886 tcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgt 54148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 6954984 - 6954831
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||||||| | ||||||||||||||||| |||| ||||||| ||||||||||||||||| |    
T  6954984 caacttctctctaaactttctttctccttcgttcactgaggaggggt-gattttaggtcattttttgacctagaatcacccctctacatcttttttcccc 6954886  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| |||||||||||||| |||||||| ||| | | ||||| |||||||    
T  6954885 ttttctttcaatctaaataagtgggtttcacatctatcaagtttttcattttgtg 6954831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 10229255 - 10229430
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttgg--cctaaaatca 210  Q
    |||||||||| || ||| | ||| ||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||| |||||| |  |||| |||||    
T  10229255 ttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggt-ggttttaggtcttttttttggacctagaatca 10229353  T
Q  211 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  10229354 ccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 10229430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 10108019 - 10108190
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||  ||||| |||||||||| ||||||||||||||||  | |||| |||||||    
T  10108019 ttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggt-ggttttaggtcatttt--gacctagaatcacc 10108115  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||| | ||| | | |||||||||||||    
T  10108116 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtg 10108190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 20609175 - 20608979
Alignment:
Q  143 ctaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttc-------ctctta 235  Q
    |||| ||||||||||| ||||||| | |||||||||| | ||||| || |||||||| |||||||||| | |||||||||||||||        |||||     
T  20609175 ctaagctttctttctccttcattcgtcgaggaggggt-gattttaagttattttttgacctaaaatcaaccctctacatcttttttttttttttctcttt 20609077  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||| |||||||||||||||||| |||||||| | | |||||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||    
T  20609076 tctttcaatctaaataagtggttttaacatatatcaagtttttccttttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgcg 20608979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 48651043 - 48650869
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||| | ||| | ||||||||| ||||||||||||||||  || ||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  48651043 ttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggt-ggttttaggtcattttttgacctaaaatcacc 48650945  T
Q  213 actctacatctt-ttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||| ||||||| |||||| ||| |||||| ||||  ||||||||||||||||| ||| | | |||||||||||||    
T  48650944 cctcgacatctttttttccccttttctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtg 48650869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 40487102 - 40487254
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    ||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| ||||||||| || ||||||||||||||||| |||| |||    
T  40487102 ctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tgattttaggtcattttttgacctagaat 40487200  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcac 263  Q
    |||   |||||||| ||||||| ||| |||||| |||||||||||||||||||||    
T  40487201 cactcttctacatc-tttttccccttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 33579649 - 33579803
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||| || ||| ||||| || || |||| ||||||| ||||||||||| |||| |||||||    
T  33579649 ttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggt-ggttttaagtcattttttgacctagaatcacc 33579747  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     |||||||||||||||||  || |||||| ||||||||||||| |||||||||||||    
T  33579748 cctctacatcttttttcc-attttctttcaatctaaataagtgattttcacatatat 33579803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 45568752 - 45568601
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||  ||| ||| | |    
T  45568752 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggg-tggttttaggtcattttttgatctagaataatc 45568654  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
      |||||||||||||||| ||| |||||| |||||||||||| ||||||||||    
T  45568653 catctacatcttttttccccttttctttcaatctaaataagttgttttcacat 45568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 269
Target Start/End: Complemental strand, 47042364 - 47042205
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    ||||||||||||||| | ||| | ||||||||| ||||||||| ||| || ||| ||||| |||||||||| ||||||||||||||||||  |||| |||    
T  47042364 ctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggt-ggttttaggtcattttttaacctataat 47042266  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||| ||||||||||||||| | ||| |||||| || |||||||||| |||||||||||||    
T  47042265 cacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatat 47042205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 36461739 - 36461566
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| ||||  ||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||||||||||||| |||| | |||||    
T  36461739 ttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagt-ggttttaggtcattttttgacctatattcacc 36461641  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||| | | |||| ||||||||    
T  36461640 cctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtg 36461566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 40556492 - 40556665
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||  |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  40556492 ttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 40556590  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||| ||||||||||| | ||| |||||  || ||||||||||||||||| || ||| | | ||| |||||||||    
T  40556591 cctccacatctttttttcccttttcttttgatataaataagtggttttcatatctatcaagttttcccttttgtg 40556665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 52923403 - 52923252
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| |||||||||||| ||| | ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |    
T  52923403 caacttctctctaaactttctttctccttcgttcattgaggagaggtag-ttttaagtcattttt-gacctagaatcacccctctacatcttttttcc-c 52923307  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  52923306 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 52923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 9797833 - 9797686
Alignment:
Q  115 ttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccac 214  Q
    ||||||||||| ||| | ||||||||| ||||||||| |||||| ||| ||||||||| |||   |||||||||||||||||||| |||| ||||||| |    
T  9797833 ttctagtgagagaaactccaacttctctctaaactttatttctccttcgttcattgag-agg---tggttttaggtcattttttgacctagaatcacccc 9797738  T
Q  215 tctacatctt-ttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    |||||||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  9797737 tctacatcttttttttctcttttctttcaatctaaataagtggttttcacat 9797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 333
Target Start/End: Complemental strand, 23800220 - 23799990
Alignment:
Q  113 ttttctagtgagaaaaatttcaactt-ctcactaaactttctttctcattcattcattgaggaggggt-tggttttaggtcattttttggcctaaaatca 210  Q
    ||||||||||||| ||| ||||| || ||| ||||| ||| |||||| ||||||||| || ||||||  ||||||||||| |||||||| |||||||| |    
T  23800220 ttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaatta 23800121  T
Q  211 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat-aag---gc----ttttccttttgtgatttcattgtctaat 302  Q
    |   |||||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||   ||    ||||  |||||||||||| | |||||||    
T  23800120 ctcttctacatcttttttcctcttttctttcaatctaaataagtggtttttacatatatcaagtttgcccttttttgtttttgtgatttcgtcgtctaat 23800021  T
Q  303 tgtggcgttgtgttgttagtcatattgtgcg 333  Q
    || ||||||||||| |||||| | |||||||    
T  23800020 tgcggcgttgtgttcttagtcgtcttgtgcg 23799990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 7449209 - 7449063
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||| ||||| ||| | ||||||||| | ||||||| |||||| ||| |||||| ||||||| | ||||||||||||||||||| | || ||||  |    
T  7449209 ttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggct-ggttttaggtcattttttgacatagaatcgtc 7449112  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttc 261  Q
     ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7449111 cctctacatcttttttcctcttttctttcaatctaaataagtggttttc 7449063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 7457351 - 7457205
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||| ||||| ||| | ||||||||| | ||||||| |||||| ||| |||||| ||||||| | ||||||||||||||||||| | || ||||  |    
T  7457351 ttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggct-ggttttaggtcattttttgacatagaatcgtc 7457254  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttc 261  Q
     ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7457253 cctctacatcttttttcctcttttctttcaatctaaataagtggttttc 7457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 333
Target Start/End: Complemental strand, 43488905 - 43488670
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggt-------tggttttaggtcattttttggcctaa 205  Q
    |||| |||||||| ||| ||||||||||| |||||||||||||||| ||||||||| | || ||||        ||| |||||||| ||||||| ||||     
T  43488905 ttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-ttttttgacctag 43488807  T
Q  206 aatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcc---------ttttgtgatttcattg 296  Q
    ||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||||| ||| | | |||| |         |||||||||||| | |    
T  43488806 aatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgttttttgtgatttcgtcg 43488707  T
Q  297 tctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    ||||| ||||||||||||||||| ||| | |||||||    
T  43488706 tctaagtgtggcgttgtgttgttcgtcgtcttgtgcg 43488670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 29921856 - 29921988
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||||||| ||||||| | |||||||||| | |||||||||||||||||  ||||||||||  |||| |||||||||||| |||     
T  29921856 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctt- 29921954  T
Q  236 tctttccatctaaataagtggttttcacatatat 269  Q
    |||||| ||||||||||||| ||| |||||||||    
T  29921955 tctttcaatctaaataagtgatttccacatatat 29921988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 29971009 - 29971141
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||||||| ||||||| | |||||||||| | |||||||||||||||||  ||||||||||  |||| |||||||||||| |||     
T  29971009 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctt- 29971107  T
Q  236 tctttccatctaaataagtggttttcacatatat 269  Q
    |||||| ||||||||||||| ||| |||||||||    
T  29971108 tctttcaatctaaataagtgatttccacatatat 29971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 38545616 - 38545712
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatca 210  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| ||| |||||||||||| || |||||||||||||||||||| |||| |||||    
T  38545616 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtgg-tggttttaggtcattttttgacctagaatca 38545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 32701299 - 32701421
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    |||||||||  ||||||||||||||| ||| ||||| |||| ||||| ||||||||||||||||||| |||| ||||| | |||||||||||| |||  |    
T  32701299 caacttctctttaaactttctttctccttcgttcatcgaggtggggt-ggttttaggtcattttttgacctagaatcatccctctacatctttcttctcc 32701397  T
Q  233 ttatctttccatctaaataagtgg 256  Q
    || |||||| ||||||||||||||    
T  32701398 ttttctttcaatctaaataagtgg 32701421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 21534092 - 21533966
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt-cctctta 235  Q
    ||||| |||||||||||||||| ||| || || ||||| |||| |||||||||||  |||||| |||| ||||||| ||||||||||||||| ||||||     
T  21534092 ttctctctaaactttctttctccttcgttaatcgaggatgggt-ggttttaggtc--tttttgacctagaatcacccctctacatctttttttcctcttt 21533996  T
Q  236 tctttccatctaaataagtggttttcacat 265  Q
    |||| | |||||||||||||||||||||||    
T  21533995 tcttccaatctaaataagtggttttcacat 21533966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 31272119 - 31271942
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    ||||||||||||||||| ||| | ||||||||| ||||  ||||||| || ||| ||||| ||||||||  || |||||||| |||||||  |||| |||    
T  31272119 ctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaat 31272020  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || | || |||||||||| ||| ||| ||| || |||||||||| |||||||||||| ||| | | |||| ||||||||    
T  31272019 catccctttacatcttttgtcccctt-tctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtg 31271942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 26276070 - 26275951
Alignment:
Q  144 taaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttcca 243  Q
    ||||||||||||||| || ||||||||||||| || ||||||||||| |||||||| |||||||||| | ||| |||| ||||| ||  || |||||| |    
T  26276070 taaactttctttctcctttattcattgaggagagg-tggttttaggtaattttttgacctaaaatcaaccctcgacat-tttttacccattttctttcaa 26275973  T
Q  244 tctaaataagtggttttcacat 265  Q
    | ||||||||||||||||||||    
T  26275972 tttaaataagtggttttcacat 26275951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 46220459 - 46220613
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||| | ||| |  |||||||| |||||||||||||||| || ||| |||||||| ||| ||||||||||||||||||   | |||||| ||     
T  46220459 ttttctagtgatagaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcatttttaa-cataaaattact 46220557  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     || |||||||||||||||||| | |||  || |||||||| |||||||||||||||    
T  46220558 cctttacatcttttttcctctttt-tttaaatataaataagcggttttcacatatat 46220613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 50194591 - 50194437
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| ||||| |||| || | ||| ||| || |||||||| |||||||||| ||||||||||||    
T  50194591 ttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagt-ggttttagatcattttttgacctaaaatcacc 50194493  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     |||| |||| ||||||| ||| |||||| ||||||||||||| ||| |||||||||    
T  50194492 tctctgcatcctttttcc-cttctctttcaatctaaataagtgatttccacatatat 50194437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 291
Target Start/End: Complemental strand, 12150090 - 12149915
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| | | |||||||||||  |||||||||||||  ||   ||||| |||||||||| ||||||| || |||||||| |||| |||||||    
T  12150090 ttttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggt-ggttttaagttattttttgacctataatcacc 12149992  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
     ||||||| |||||||  |||| |||||  | |||||||||||||||| ||||||||   | |||| ||||||||||||    
T  12149991 cctctacacctttttt--tcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgattt 12149915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 37040632 - 37040704
Alignment:
Q  194 tttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||||| |||| ||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  37040632 tttttgacctagaatcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacata 37040704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 42460596 - 42460679
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||||||||| |||||| |||||||||| || ||| |||||||||||| ||| |||||| ||||||||||||| ||| ||||||    
T  42460596 ttttaggtcagtttttgacctaaaatcatcaatctgcatcttttttccccttttctttcaatctaaataagtgatttccacata 42460679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 36910862 - 36910776
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||| ||||||  ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||| ||||    
T  36910862 cctagaatcactcctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtg 36910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 286
Target Start/End: Original strand, 43016636 - 43016808
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtca--ttttttggcctaaaatca 210  Q
    ||||||||||||| ||| |  |||||||| ||||| |||||||||| ||| ||||| ||||| ||| |||||||||||||  | ||||| |||| |||||    
T  43016636 ttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaaggg-tggttttaggtcagttcttttgacctagaatca 43016734  T
Q  211 ccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgt 286  Q
    || ||| || |||||||||| ||| |||||| || || |||||| | |||||||||||| | | || |||||||||    
T  43016735 cccctccacgtcttttttcccctt-tctttcaatttatataagt-gatttcacatatattaagtttatccttttgt 43016808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 629214 - 629059
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| |  |||||||| ||||  |||| ||| | |||| |||| |||||||||| |||||||||||||| |||| |||||||||| |    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggt-ggttttaggtcattctttgacctaaaatcatc 629116  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
      ||| ||||||||||   |   |||||| ||||||||||||| |||||||| ||||    
T  629115 cttctgcatcttttttttccccttctttcgatctaaataagtgattttcacaaatat 629059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 53099746 - 53099798
Alignment:
Q  281 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||||||||| | ||||||||||| |||||||||||||||||| |||||||    
T  53099746 ttttgtgatttcgtcgtctaattgtgacgttgtgttgttagtcatcttgtgcg 53099798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 21290104 - 21289977
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||| ||| |||| |||| |||||| ||| | |||||||||| |||||| |||| ||||||| |||| |||||||||||| ||      
T  21290104 cttctctctaagttttcttcctctttcactcatggaggagaggt-gattttaggtcaatttttgacctagaatcacccctctgcatcttttttcccct-- 21290008  T
Q  236 tctttccatctaaataagtggttttcacata 266  Q
    |||||| ||| ||||||||| |||| |||||    
T  21290007 tctttcaatccaaataagtgattttaacata 21289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 51923611 - 51923728
Alignment:
Q  214 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgt 313  Q
    |||| |||||||||||| ||| |||||| ||||||||||||| |||||||||  || | | ||||| ||| |||||||| | |||| | |||| ||||||    
T  51923611 ctctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacatgcatcaagtttttc-tttcgtgatttcgtcgtcttagtgtgacgttgt 51923708  T
Q  314 gttgttagtcatattgtgcg 333  Q
    |||||| ||||| |||||||    
T  51923709 gttgttcgtcatcttgtgcg 51923728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 266
Target Start/End: Original strand, 7546397 - 7546544
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 218  Q
    ||||||| |||||  | |||||| ||||  ||||||||||  ||| |||| |||||||||| | |||||||||| ||||||  ||| ||||||| ||||     
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggt-gattttaggtcaatttttgatctagaatcacccctctg 7546495  T
Q  219 catctttttt--cctcttatctttccatctaaataagtggttttcacata 266  Q
    ||||||||||  || | | |||||| ||||||||||||| ||||||||||    
T  7546496 catcttttttttccccct-tctttcaatctaaataagtgattttcacata 7546544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 4821624 - 4821708
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctt 234  Q
    |||||||||| ||||||| | ||| |||||| ||||||||||||||||||| |||| ||||||  |||| ||||  ||||||||||    
T  4821624 tttctttctctttcattcgtcgagaaggggt-ggttttaggtcattttttgacctataatcactcctctgcatccattttcctctt 4821708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 265
Target Start/End: Complemental strand, 12050936 - 12050804
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||| |||||||||| ||| |||||  |||| | || ||||||| || ||||||||   || ||||||| ||||||||||| ||||| |    
T  12050936 caacttctctctaaattttctttctccttcgttcatcaaggatgtgt-ggttttaagttattttttgatttagaatcacccctctacatcttctttcccc 12050838  T
Q  233 ttat-ctttccatctaaataagtggttttcacat 265  Q
    || | ||||  ||||| |||||||||||||||||    
T  12050837 tttttctttaaatctagataagtggttttcacat 12050804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 29239185 - 29239273
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||||||||||||||||  ||| ||||||| | |||||||||||||  || | |||||  |||||||||| || |||||||||||||    
T  29239185 tggttttaggtcattttttgatctagaatcacccc-ctacatctttttttttcctttctttagatctaaataaatgattttcacatatat 29239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 44804888 - 44804929
Alignment:
Q  187 aggtcattttttggcctaaaatcaccactctacatctttttt 228  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  44804888 aggtcattttttgacctaaaatcaccactctgcatctttttt 44804929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 53508069 - 53508156
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||| ||||||||||||| | ||||||||||||  ||| | ||||||||||| || |||||| || |||||||||| |||||||||||||    
T  53508069 tggtcttaggtcattttt-gacctaaaatcacccatctgcgtcttttttcctttt-tctttcaatataaataagtgattttcacatatat 53508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 20988007 - 20987952
Alignment:
Q  214 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||||||| ||||||||| |||||| || |||||||||| |||||| ||||||    
T  20988007 ctctacatcttctttcctcttttctttcaatttaaataagtgattttcaaatatat 20987952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 1649309 - 1649355
Alignment:
Q  223 ttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||| || | |||||| |||||||||||||||||||||||||||    
T  1649309 ttttttcttcctttctttcaatctaaataagtggttttcacatatat 1649355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 29249098 - 29249178
Alignment:
Q  187 aggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||| |||||| |||| ||||||  |||| ||||||||| |||||| || ||| ||||||||||||| |||||||||||||    
T  29249098 aggtcactttttgacctagaatcacttctcttcatcttttt-cctctt-tcgttcgatctaaataagtgtttttcacatatat 29249178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 9319937 - 9320010
Alignment:
Q  214 ctctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||||||||| | | | | |||| ||| ||||||||||||||||||| ||| | | |||||||||||||    
T  9319937 ctctacatctttttttcccctttttttcaatcaaaataagtggttttcacatctatcaagtttttccttttgtg 9320010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 18010921 - 18010973
Alignment:
Q  236 tctttccatctaaataagtggttttcacatatat-aaggcttttccttttgtg 287  Q
    |||||| ||||||| ||||||||||||||||||| || | |||||||||||||    
T  18010921 tctttcgatctaaaaaagtggttttcacatatatcaaagtttttccttttgtg 18010973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 292
Target Start/End: Original strand, 7646263 - 7646442
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  7646263 ttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 7646361  T
Q  213 actctacatc-ttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttc 292  Q
     ||||||||| |||||||| ||| |||||| ||||||||||||||||||||||| ||  | | ||||||||||||| ||||    
T  7646362 cctctacatctttttttccccttttctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtgttttc 7646442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 36943432 - 36943281
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||| || || |||||||||||||||| ||| || || |||||||||| ||||||||||||||||||| |||| |||||||    
T  36943432 ttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 36943334  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  36943333 actctacatcttttttcctcttttctttcaatctaaataagtagttttcacat 36943281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 287
Target Start/End: Complemental strand, 9169566 - 9169393
Alignment:
Q  112 attttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcac 211  Q
    ||||||||||| || ||| | ||||||||| |||||||||||||||||||| || || |||||||||| ||||||||||||||||| | |||| ||||||    
T  9169566 attttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggt-ggttttaggtcattttt-gacctagaatcac 9169469  T
Q  212 cactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | |||||||| |||||| | ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  9169468 ccctctacatttttttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 9169393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 4098914 - 4099067
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||| |||| || |||||||||||||||| |||| |||||||  |||||||||||||||| |    
T  4098914 caacttctctctaaactttctttctctttccttcatcgaggaagggt-ggctttaggtcattttttgacctagaatcacccatctacatcttttttcccc 4099012  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  4099013 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 4099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 7448039 - 7448211
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||| ||||||||||||| || ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  7448039 ttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggt-ggttttaggtcattttttgtcctagaatcacc 7448137  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||| ||||||| ||| |||||| |||||||||| |||||||||||| ||| | | |||||||||||||    
T  7448138 cctctacatc-tttttccccttttctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtg 7448211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 4778564 - 4778717
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||  |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||| | |    
T  4778564 caacttctttctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacccctctacatctttttttccc 4778662  T
Q  233 ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    || |||||| || |||||||||||||||||||| ||| | | |||||| ||||||    
T  4778663 ttttctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtg 4778717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 29279882 - 29279706
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    |||||||||| |||||| ||| | ||||||||| |||| ||||||||||| ||||||||| ||||| | |  | ||||||||||||||||||   |||||    
T  29279882 ctaattttcttgtgagagaaactccaacttctctctaacctttctttctc-ttcattcatcgaggatgagc-gattttaggtcattttttgggtaaaaat 29279785  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  29279784 cgctcctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 29279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 287
Target Start/End: Original strand, 31788243 - 31788420
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaat 208  Q
    ||||||||||||||||| ||| | ||||||||| |||||||||||||||  ||| ||||| |||||| ||  |||||||||| |||||||| |||| |||    
T  31788243 ctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggc-ggttttaggtaattttttgacctagaat 31788341  T
Q  209 caccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||| |||||||||||||||||  || |||||| ||||||||||||| ||||||||| ||| | | | |||||||||||    
T  31788342 cacccctctacatcttttttcccattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtg 31788420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 43397427 - 43397256
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | |||||||||  |||||||||||| |  ||| ||||| ||| |||||| ||||||||||||||||||| |||| |||||||    
T  43397427 ttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggt-ggttttaggtcattttttgacctagaatcacc 43397329  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||  | ||| |||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  43397328 tctctacatcttttt--cccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 43397256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 265
Target Start/End: Original strand, 18763265 - 18763409
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 218  Q
    ||||||| ||| | ||||||||| |||||||||||||| | ||||| ||| |||||| ||| ||||||| ||||||||||| |||| ||||||| |||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggt-ggttttatgtcattttttgacctagaatcacccctcta 18763363  T
Q  219 catcttttttcctcttatctttccatctaaataagtggttttcacat 265  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||    
T  18763364 catcttttttcc-cttttctttcaatctaaataagtggttttcacat 18763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 265
Target Start/End: Original strand, 1421462 - 1421617
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcc-taaaatcac 211  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||| |   || ||||||    
T  1421462 ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcatttttttgatatagaatcac 1421560  T
Q  212 cactctacatctttttt---cctcttatctttccatctaaataagtggttttcacat 265  Q
    | |||||||||||||||   || ||| |||||| |||||||||||||||||||||||    
T  1421561 ccctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacat 1421617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 11985538 - 11985366
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||| ||||| ||| | ||||||||| |||||||||||||||| ||||||| | |||||| ||| ||||||| ||||||||||  |||| |||||||    
T  11985538 ttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggt-ggttttaagtcattttttaacctagaatcacc 11985440  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||| |||||| || ||| |||||| || |||||||||||||||||||||||| | | |||| ||||||||    
T  11985439 cctctacaactttttccc-cttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtg 11985366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 37876892 - 37876687
Alignment:
Q  127 aaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttt 226  Q
    ||||| ||||||||| |||||||||||||||  ||| ||||| |||||||||| |||||||||||| |||||| |||| |||||||  | ||||||||||    
T  37876892 aaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggt-ggttttaggtcaatttttgacctagaatcacccttgtacatctttt 37876794  T
Q  227 ttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgatttcattgtctaattgtggcgttgtgttgttagtcata 326  Q
    | ||  || |||||  ||||||||||||||||||||||| ||| |   |||| ||||||||||||  | |||||| || |||||| ||||||| ||| |     
T  37876793 tcccctttttcttttaatctaaataagtggttttcacatctatcaaattttttcttttgtgatttggtcgtctaagtgcggcgttttgttgttcgtcgtc 37876694  T
Q  327 ttgtgcg 333  Q
    |||||||    
T  37876693 ttgtgcg 37876687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 287
Target Start/End: Original strand, 8809094 - 8809245
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 233  Q
    |||||||| |||||||||||||||| ||||| | | |||||  ||| |||||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  8809094 aacttctctctaaactttctttctccttcatacgtcgaggacaggt-ggttttagatcattttt-gacctaaaatcacccctctacatcttttttcctct 8809191  T
Q  234 tatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | |||||| ||| |||||||||| || ||||||||| | | |||||||||||||    
T  8809192 tttctttcaatcaaaataagtggcttgcacatatattaagtttttccttttgtg 8809245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 17995006 - 17994874
Alignment:
Q  131 ttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcc 230  Q
    |||| |||||| ||||||||||||||||||||  || | || ||| ||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  17995006 ttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggt-ggttttaggtcattttttgccctaaaatcacctctctgcatcttttttcc 17994908  T
Q  231 tcttatctttccatctaaataagtggttttcaca 264  Q
    | || |||||| |||| |||||||||||||||||    
T  17994907 tattttctttcaatcttaataagtggttttcaca 17994874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 255
Target Start/End: Complemental strand, 27097693 - 27097573
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||||||| || ||||||||||||||||| |||| ||||||| ||||||||||||||||| |    
T  27097693 caacttctctctaaactttctttctccttcgttcatcgaggagggg-tgattttaggtcattttttgacctagaatcacc-ctctacatcttttttcccc 27097596  T
Q  233 ttatctttccatctaaataagtg 255  Q
    || |||||  |||||||||||||    
T  27097595 ttttcttttgatctaaataagtg 27097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 4904444 - 4904281
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||| ||| ||| ||||||||||| |||||||||||||||||||| || ||||| ||| ||| ||||||| ||||||||||| |||| |||||||    
T  4904444 ttttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggt-ggttttatgtcattttttgacctataatcacc 4904346  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||| |||||||||||          |||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  4904345 actttacatcttttt----------tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtg 4904281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 270
Target Start/End: Complemental strand, 7678181 - 7678024
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| | ||||||||| |||||||||||||||| ||| || || || ||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggt-ggttttaggtcattttttgacctagaatcacccctct 7678083  T
Q  218 acatctttttt------cctcttatctttccatctaaataagtggttttcacatatata 270  Q
    |||||||||||       | ||| |||||| ||||||||||||||||||||||| ||||    
T  7678082 acatctttttttttttctcccttttctttcaatctaaataagtggttttcacatctata 7678024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 119 - 269
Target Start/End: Complemental strand, 12648226 - 12648078
Alignment:
Q  119 agtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactcta 218  Q
    ||||||| ||| | |||||||||  |||  |||||||||| || | || |||||||||||| ||||||||||||||||||| |||| ||||||| ||| |    
T  12648226 agtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggt-ggttttaggtcattttttgacctagaatcacccctcca 12648128  T
Q  219 catcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||| ||||| |||||| ||||||||||||| ||| |||||||||    
T  12648127 catctttttt-ctcttttctttcaatctaaataagtgatttccacatatat 12648078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 12677604 - 12677491
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||| ||  ||||| ||||||||| | |||| ||||||||||||| |||| |||||||    
T  12677604 ttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagggg-tagtttaaggtcattttttgacctagaatcacc 12677506  T
Q  213 actctacatcttttt 227  Q
     ||||||||||||||    
T  12677505 cctctacatcttttt 12677491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 287
Target Start/End: Original strand, 38444982 - 38445130
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 236  Q
    ||||| |||||||||||||||| ||| ||||| || ||| ||| ||||||||||||||||| |  ||| ||||||| |||||||||||||||||  || |    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggt-ggttttaggtcattttt-gatctagaatcacccctctacatcttttttcccttttt 38445079  T
Q  237 ctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||| || |||||||||||||||||||| ||| | | |||| ||||||||    
T  38445080 ctttcaatataaataagtggttttcacatctatcaagttttttcttttgtg 38445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 332
Target Start/End: Complemental strand, 10237452 - 10237305
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 282  Q
    |||||||||| |||||| |||| ||||||| ||||||||||||||||| ||| |||||| ||||||||||||| |||||||||| || | | |||| |||    
T  10237452 ttttaggtcaatttttgacctagaatcacccctctacatcttttttcccctt-tctttcaatctaaataagtgattttcacatacatcaag-tttttctt 10237355  T
Q  283 ttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgc 332  Q
    | |||||||| | |||| | || | |||||||||||| ||| | ||||||    
T  10237354 tcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgc 10237305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 11833341 - 11833430
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    |||||||||||||||||||| | ||||||||   || |||||||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  11833341 tggttttaggtcattttttgacttaaaatcattcctttacatctttttttctcttttctttcaatttaaataagtggttttcacatatat 11833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 284
Target Start/End: Complemental strand, 19062608 - 19062491
Alignment:
Q  164 ttcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcac 263  Q
    ||||| ||||||||  ||||||||||| ||||||||  ||| ||||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||||||    
T  19062608 ttcatcgaggaggg--tggttttaggttattttttgaactagaatcacccctctacatcctttttcc-cttttctttcaatctaaataagtggttttcac 19062512  T
Q  264 atatataaggcttttcctttt 284  Q
    || ||| | | ||||||||||    
T  19062511 atctatcaagtttttcctttt 19062491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 35220122 - 35220231
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| | |||| |||| |||||||||||||||| ||||||||| ||    ||| ||||||||||| |||||||| |||| |||||||    
T  35220122 ttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatcga----ggggtggttttaggttattttttgacctagaatcacc 35220217  T
Q  213 actctacatctttt 226  Q
     |||| ||||||||    
T  35220218 cctctccatctttt 35220231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 5428156 - 5428003
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||| |||||||||| ||| ||||| |||||||||| |||||||||| | |||||| |||| | ||| |  |||||||||||||||| |    
T  5428156 caacttctctctaaattttctttctccttcgttcatcgaggaggggt-ggttttaggttaatttttgacctagagtcatcgttctacatcttttttcccc 5428058  T
Q  233 -ttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     || |||||| ||||||||||||  ||||||||| ||| | | |||| ||||||||    
T  5428057 tttttctttcaatctaaataagt-tttttcacatctatcaagttttttcttttgtg 5428003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 31129056 - 31128974
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcatttt 196  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||| || || ||||||||| || ||||||||||||||    
T  31129056 ttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggagggg-tgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 32448882 - 32448782
Alignment:
Q  160 ttcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttt 259  Q
    |||| |||| |||||||||| |||||||||||||| |||| |||||||||||| |||| |||| ||||||| ||| |||||| ||||||||||||| |||    
T  32448882 ttcactcatcgaggaggggt-ggttttaggtcattatttgacctaaaatcacccctctgcatc-tttttcccctt-tctttcgatctaaataagtgattt 32448786  T
Q  260 tcac 263  Q
    ||||    
T  32448785 tcac 32448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 25509378 - 25509200
Alignment:
Q  109 ctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcatttttt--ggcctaaa 206  Q
    ||||||||||||||||||||| |  ||||| || |||| ||||||||||  ||| ||||| |||||  ||| ||||||||||| ||||||  |  |||||    
T  25509378 ctaattttctagtgagaaaaactcaaacttttctctaa-ctttctttcttcttcgttcatcgaggaatggt-ggttttaggtctttttttttgtactaaa 25509281  T
Q  207 atcaccactctacatctttttt-cctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||| |||||||  |||||| |||||| |||||| |||||||||| ||||||| | |||||| | | |||||||||||||    
T  25509280 atcacc-ctctacagatttttttcctcttttctttcaatctaaataaatggttttaagatatatcaagtttttccttttgtg 25509200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 31128977 - 31128915
Alignment:
Q  225 ttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  31128977 ttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 31128915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 1415422 - 1415510
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||||||| ||||||||  ||| ||||||| ||||||||||||||||| ||| |||||| || |||||||||| |||||||| ||||    
T  1415422 tggttttaggttattttttgatctagaatcacccctctacatcttttttcc-cttttctttcaatttaaataagtgattttcacacatat 1415510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 14955350 - 14955465
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||| ||| |||| |||| |||||||||| | ||||| |||| |||||| |||| ||||| | |||| |||||||||||||||| |||||| ||||||    
T  14955350 tttcttcctctttcactcatcgaggaggggt-gattttaagtcaatttttgacctagaatcatccctctgcatcttttttcctctt-tctttcaatctaa 14955447  T
Q  249 ataagtggttttcacata 266  Q
    ||||||| ||| ||||||    
T  14955448 ataagtgatttccacata 14955465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 18108008 - 18107891
Alignment:
Q  149 tttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaa 248  Q
    |||||||||| |||||||||||||||  ||| ||||||||||||||||||| |||| ||||||| || | ||||||||  || ||| |||||| |  |||    
T  18108008 tttctttctctttcattcattgaggaatggt-ggttttaggtcattttttgacctagaatcacctctttgcatcttttaccc-ctt-tctttcaaattaa 18107912  T
Q  249 ataagtggttttcacatatat 269  Q
    |||||||||||||||| ||||    
T  18107911 ataagtggttttcacacatat 18107891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 4041820 - 4041730
Alignment:
Q  196 tttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||| |||| ||||||| |||||||| ||||||||  || |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  4041820 tttgacctagaatcacccctctacattttttttcccgtt-tctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 4041730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 29173962 - 29173855
Alignment:
Q  180 tggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc--ttatctttccatctaaataagtggttttcacatatataaggcttt 277  Q
    |||||||||||  ||||||| |||||||||  | |||||||||||||||  ||  || |||||| ||| ||||||||||||||||||||| | ||| |||    
T  29173962 tggttttaggt--ttttttgacctaaaatcgtccctctacatctttttttttcccttttctttcaatccaaataagtggttttcacatatttcaggtttt 29173865  T
Q  278 tccttttgtg 287  Q
    ||||||||||    
T  29173864 tccttttgtg 29173855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 37994081 - 37994216
Alignment:
Q  128 aatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttt 227  Q
    |||| ||||||||| |||   |||||||||| |||| |||| ||||| |||| |||||||||||| |||||| |||| ||||||| |||| ||| || ||    
T  37994081 aattccaacttctctctaggttttctttctctttcaatcatcgaggaagggt-ggttttaggtca-tttttgacctagaatcacccctctgcattttgtt 37994178  T
Q  228 tcctcttatctttccatctaaataagtggttttcacata 266  Q
    ||| ||| |||||| || |||||||||| ||||||||||    
T  37994179 tcccctt-tctttcgatttaaataagtgattttcacata 37994216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 42698988 - 42698922
Alignment:
Q  108 tctaattttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgagga 174  Q
    ||||||||| |||||||| ||| ||||||||||  |||||||||||||||| || ||||||||||||    
T  42698988 tctaattttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcattgagga 42698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 6436468 - 6436568
Alignment:
Q  183 ttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttcctt 282  Q
    ||||||||||||||||| | || ||||||| |||| || | ||||||||| | |||||| ||||||||||||| |||||||| |||||| | |||| |||    
T  6436468 ttttaggtcattttttgacatagaatcacccctctgca-catttttcctcatttctttcgatctaaataagtgattttcacacatataaagttttttctt 6436566  T
Q  283 tt 284  Q
    ||    
T  6436567 tt 6436568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 269
Target Start/End: Complemental strand, 30400307 - 30400191
Alignment:
Q  153 tttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcac-cactctacatcttttttcctcttatctttccatctaaata 251  Q
    |||||| ||||||||| ||| || ||| |||||||| |||||||||| ||||||||||| |  ||||||||||||||    || |||||  |||||||||    
T  30400307 tttctccttcattcatcgagaagaggt-ggttttagatcattttttgacctaaaatcactccatctacatcttttttttctttttcttttaatctaaata 30400209  T
Q  252 agtggttttcacatatat 269  Q
    |||| |||||||||||||    
T  30400208 agtgtttttcacatatat 30400191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 3308787 - 3308881
Alignment:
Q  170 gaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||||||||| | |||||||||| |||||| |||| ||||||| || | |||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  3308787 gaggaggggt-gattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctt-tatttcaatctaaataagtgattttcacata 3308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 24461250 - 24461382
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||  |||  ||||| |||| ||||| ||||||||| ||||||||||||||||||| |||| ||||||  |||| ||||  |||| |||    
T  24461250 caacttctctctaagtttttattctctttcactcattaaggaggggt-ggttttaggtcattttttgacctagaatcactcctctgcatccgtttt-ctc 24461347  T
Q  233 ttatctttccatctaaataagtggttttcacatatat 269  Q
    |  | |||| ||||||||||||| ||| |||||||||    
T  24461348 t--tttttcaatctaaataagtgatttccacatatat 24461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 269
Target Start/End: Complemental strand, 29574901 - 29574787
Alignment:
Q  153 tttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataa 252  Q
    |||||| |||| || | |||||||||| |||||||| |||||||||| |||| ||||||| || | |||| ||||| |  || |||||| ||||||||||    
T  29574901 tttctctttcactcgtcgaggaggggt-ggttttagatcattttttgacctagaatcacc-ctgtgcatccttttttccattttctttcaatctaaataa 29574804  T
Q  253 gtggttttcacatatat 269  Q
    ||| ||| |||||||||    
T  29574803 gtgatttccacatatat 29574787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 36691753 - 36691837
Alignment:
Q  201 cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||| ||||||| |||||| |||||| |||| || |||||| |||||||||||||| |||||||||||| | | |||| ||||||||    
T  36691753 cctagaatcacccctctacttcttttctcctttt-tctttcaatctaaataagtgg-tttcacatatatcaagttttttcttttgtg 36691837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 23933839 - 23933775
Alignment:
Q  204 aaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
    ||||||||| ||||||||||||||| | ||| | |||| |||||||||||||  ||||||||||||    
T  23933839 aaaatcacctctctacatctttttttccctt-tatttcaatctaaataagtgactttcacatatat 23933775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 41694474 - 41694550
Alignment:
Q  182 gttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttt 259  Q
    ||||||||||||||||||   |||||||| || ||| |||||||||||| |||| ||||  |||||||||||| ||||    
T  41694474 gttttaggtcattttttgatttaaaatcatcattcttcatcttttttcccctta-cttttgatctaaataagtagttt 41694550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 7448214 - 7448266
Alignment:
Q  281 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||||||||| |||||||| || |||||||||||||| ||| | |||||||    
T  7448214 ttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcg 7448266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 15273 - 15445
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| ||| ||| | ||||||||| |||||||||||||||||||| |||| |||||||    
T  15273 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggagggg-tggttttaggtcattttttgacctagaatcacc 15371  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||| ||||||| ||| |||||| |||||||||||||||||||| || | | | | |||||||||||||    
T  15372 cctctacatc-tttttccccttttctttcaatctaaataagtggttttcatatctttcaagtttttccttttgtg 15445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 50567 - 50740
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| | ||||||||  |||||||||||||||| ||| |||||||||||||||| | |||||||||| |||||| |||| ||||| |    
T  50567 ttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggt-gattttaggtcactttttgacctagaatcatc 50665  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  50666 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 50740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 72172 - 71999
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||||||||| || ||| ||||||||||| |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  72172 ttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggt-ggttttaggtcattttttgacctagaatcacc 72074  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    | ||| ||||||||| || ||| |||||| ||| ||||||||||||||||||| ||| | | |||||| ||||||    
T  72073 attcttcatctttttcccccttttctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtg 71999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 33056 - 32883
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |  |||||||| |||||||||||||||  ||| || || ||||||| || ||||||||||||||||||| | || |||||||    
T  33056 ttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagt-ggttttaggtcattttttgacatagaatcacc 32958  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
     ||||||||||||| ||| ||| |||||| ||||||||||||||||||||||| ||| | | |||||||||||||    
T  32957 cctctacatcttttgtccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 32883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 1125 - 1279
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||  ||| ||||||||||| ||||| |||||||||| ||| ||||| |||||| ||| ||||||||||||||||||| |||| |||||||    
T  1125 ttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggt-ggttttaggtcattttttgacctagaatcacc 1223  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     |||||| |||||||||| ||| ||||||  ||||||||||||||||||||||||||    
T  1224 cctctacttcttttttcc-cttttctttcactctaaataagtggttttcacatatat 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 262
Target Start/End: Complemental strand, 15145 - 14998
Alignment:
Q  114 tttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacca 213  Q
    |||||||||||| ||| | ||| ||||| |||||||||||||||| ||||||||| ||||| | || || || |||| |||||||| |||| ||||||||    
T  15145 tttctagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggtt-aggttattttttgacctagaatcacca 15047  T
Q  214 ctctacatcttttttcctcttatctttccatctaaataagtggttttca 262  Q
    |||||||||||||||||  || |||||| |||||||||||| |||||||    
T  15046 ctctacatcttttttccctttttctttcaatctaaataagtcgttttca 14998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 118 - 287
Target Start/End: Complemental strand, 2120 - 1953
Alignment:
Q  118 tagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactct 217  Q
    |||||||| ||| | ||||||||  | |||||||||||||  ||||||||||||||||  || | ||||||||| ||||||  |||||||||||   |||    
T  2120 tagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgt-gtttttaggtcttttttta-cctaaaatcactcatct 2023  T
Q  218 acatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    ||||||||||||||||| |||||| || |||||||||||||| ||||||||| | | |||||||||||||    
T  2022 acatcttttttcctcttttctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtg 1953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 335
Target Start/End: Complemental strand, 31548 - 31352
Alignment:
Q  144 taaactttctttctcattcattcattgaggaggggttggttttaggtcatt-ttttggcctaaaatcaccactctacatcttttttcctcttatctttcc 242  Q
    ||||||||||||||| ||| ||||| ||| ||| || | ||||| |||||| ||||  || ||||||||  ||||||||||||||||||||| ||||||     
T  31548 taaactttctttctccttcgttcatcgagcaggagt-gattttatgtcattgtttttaccaaaaatcactcctctacatcttttttcctcttttctttca 31450  T
Q  243 atctaaataagtggttttcacatatataaggcttttccttttgtgatt--tcatt---gtctaattgtggcgttgtgttgttagtcatattgtgcgac 335  Q
    || ||||||||| |||||||||||||| | | ||||||||||||| ||  | |||   |||||||||||||||| ||||||||||| | |||||||||    
T  31449 atataaataagtagttttcacatatatcaagtttttccttttgtgttttgtgatttccgtctaattgtggcgttatgttgttagtcgtcttgtgcgac 31352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 2260 - 2134
Alignment:
Q  133 caacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctc 232  Q
    ||||||||| ||||||||| |||||| ||| ||||| ||||||| || ||||||| |||||||||||  ||| ||||||| ||||||||||||||||| |    
T  2260 caacttctctctaaactttttttctccttcgttcatcgaggaggagt-ggttttaagtcattttttgatctagaatcacccctctacatcttttttcccc 2162  T
Q  233 -ttatctttccatctaaataagtggttt 259  Q
     || |||||| |||||||||||||||||    
T  2161 tttttctttcaatctaaataagtggttt 2134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 269
Target Start/End: Complemental strand, 58387 - 58233
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| ||| | ||||||||| ||||  |||| || || |||| || | |||||||||| ||||||||||||||||||| ||||||||||||    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggt-ggttttaggtcattttttgacctaaaatcacc 58289  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatat 269  Q
     |||| |||| ||||| | ||| |||||| ||||||||||||| ||| |||||||||    
T  58288 cctctgcatccttttttc-cttttctttcaatctaaataagtgatttccacatatat 58233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 71549 - 71438
Alignment:
Q  154 ttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataag 253  Q
    ||||| ||||||||  ||| |||||| ||||||||||||||||| | |||||||||||| |||||||| ||||  |||||| |||||| ||||||| |||    
T  71549 ttctccttcattcacagagaaggggt-ggttttaggtcattttt-gacctaaaatcacccctctacatatttt--cctcttttctttcaatctaaacaag 71454  T
Q  254 tggttttcacatatat 269  Q
    ||||||||||||||||    
T  71453 tggttttcacatatat 71438  T

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Target: scaffold0634 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 291
Target Start/End: Original strand, 8295 - 8470
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    |||| |||||||| | | |||||||||||  |||||||||||||  ||   ||||| |||||||||| ||||||| || |||||||| |||| |||||||    
T  8295 ttttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggt-ggttttaagttattttttgacctataatcacc 8393  T
Q  213 actctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtgattt 291  Q
     ||||||| |||||||  |||| |||||  | |||||||||||||||| ||||||||   | |||| ||||||||||||    
T  8394 cctctacacctttttt--tcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgattt 8470  T

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Target: scaffold0603 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 287
Target Start/End: Original strand, 7521 - 7669
Alignment:
Q  136 cttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctctta 235  Q
    |||||| ||||  |||||||||| || |||||| |||||||| | ||||||||||||||||||| |||| ||||||   ||| |||| |||| || |||     
T  7521 cttctctctaagttttctttctcctttattcatcgaggagggat-ggttttaggtcattttttgacctagaatcactcatctgcatc-ttttacccctt- 7617  T
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||| || |||||||||||||||||||||||| | | |||||||||||||    
T  7618 tctttcaatttaaataagtggttttcacatatatcaagtttttccttttgtg 7669  T

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Target: scaffold0554 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 269
Target Start/End: Original strand, 10681 - 10812
Alignment:
Q  134 aacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctct 233  Q
    |||||||| |||||||| ||| ||| ||||||||| |||||| ||| ||||||||||||||||  | |||||| ||||| ||||| ||||||||  || |    
T  10681 aacttctctctaaacttgcttcctccttcattcatcgaggagaggt-ggttttaggtcatttt--gacctaaagtcacccctctagatctttttcgcttt 10777  T
Q  234 tatctttccatctaaataagtggttttcacatatat 269  Q
    | |||||  || ||||||||||||||||||||||||    
T  10778 t-tctttgaatgtaaataagtggttttcacatatat 10812  T

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Target: scaffold0888 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 1911 - 1831
Alignment:
Q  185 ttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacata 266  Q
    |||||||| |||||| |||| ||||||| |||| |||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  1911 ttaggtcaatttttgacctagaatcacctctctgcatcttttttcccctt-tctttcaatctaaataagtgattttcacata 1831  T

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Target: scaffold0492 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 12721 - 12848
Alignment:
Q  137 ttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatcttttttcctcttat 236  Q
    ||||| || ||||||||||||| || ||||||  ||||| ||| ||||||||||||||||||| |||| ||||||| || |||||  ||||||  ||| |    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggt-ggttttaggtcattttttgacctagaatcaccgctatacat-atttttctcctttt 12818  T
Q  237 ctttccatctaaataagtggttttcacata 266  Q
    || || || |||||||||||||||||||||    
T  12819 ctatcaatttaaataagtggttttcacata 12848  T

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Target: scaffold0087 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 25637 - 25525
Alignment:
Q  113 ttttctagtgagaaaaatttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcacc 212  Q
    ||||||||||||| ||| |||||||| || |||||     |||||| ||| ||||| |||||||||| ||||||| ||||||||||| |||| |||||||    
T  25637 ttttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggt-ggttttatgtcattttttgacctataatcacc 25539  T
Q  213 actctacatctttt 226  Q
     |||||||||||||    
T  25538 cctctacatctttt 25525  T

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Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 37929 - 38000
Alignment:
Q  215 tctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| | | | |||||||||||||    
T  37929 tctacatcttttttcccctt-tctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtg 38000  T

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Target: scaffold0136; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 10227 - 10176
Alignment:
Q  236 tctttccatctaaataagtggttttcacatatataaggcttttccttttgtg 287  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  10227 tctttccatctaaataagtggttttcacatatatcaagtttttccttttgtg 10176  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 25132 - 25261
Alignment:
Q  131 ttcaacttctcactaaactttctttctcattcattcattgaggaggggttggttttaggtcattttttggcctaaaatcaccactctacatctttttt-- 228  Q
    |||||||| || |||||||||||||||| |||||||||   ||||||| |||||||| |||| |||||| | |||||||||   |||| |||||||||      
T  25132 ttcaacttttctctaaactttctttctctttcattcat--cggagggg-tggttttaagtcactttttgacttaaaatcactcatctatatctttttttt 25228  T
Q  229 -cctctt-atctttccatctaaataagtggttt 259  Q
     ||||||  |||||| |||||||||||||||||    
T  25229 ccctcttcttctttcaatctaaataagtggttt 25261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 7924 - 8029
Alignment:
Q  180 tggttttaggtcattttttgg-cctaaaatcaccactctacatcttttttcctcttatctttccatctaaataagtggttttcacatatataaggctttt 278  Q
    ||||||| ||||||||||| | |||| ||||||| ||||||||||||||||    | |||||| |||||||| |||||||||||||| ||| | | ||||    
T  7924 tggttttgggtcatttttttgacctagaatcacc-ctctacatcttttttcta--tctctttcgatctaaattagtggttttcacatctatcaagttttt 8020  T
Q  279 ccttttgtg 287  Q
    |||||||||    
T  8021 ccttttgtg 8029  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 36787 - 36839
Alignment:
Q  281 ttttgtgatttcattgtctaattgtggcgttgtgttgttagtcatattgtgcg 333  Q
    |||||||||| | | |||||||||||||||||||||| ||||| | |||||||    
T  36787 ttttgtgattccgtcgtctaattgtggcgttgtgttggtagtcgtcttgtgcg 36839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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