View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18884_high_14 (Length: 311)
Name: NF18884_high_14
Description: NF18884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18884_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 38709846 - 38709547
Alignment:
| Q |
1 |
catacaagtgtgtagtaattcaccagaggactcttgtagaatggtttattaaagtccttaagaaaatggatttagttgatctcataaagaattttgccag |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38709846 |
catagaagtgtgtagtaattcaccagaggactcttgtagaatggtttattaaagtccttaagaaaatggatttagttgatctcataaagaattttgccag |
38709747 |
T |
|
| Q |
101 |
gaaaatagaggttcccagaccacctaccattgcagatactacattcaatcaaaatcttaaggcattaggtttattggtcatttatatgctttagaagtac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38709746 |
gaaaatagaggttcccagaccacctaccattgcagataccacattcaatcaaaatcttaaggcattaggtttattggtcatttatatgctttagaagtac |
38709647 |
T |
|
| Q |
201 |
acatggatcaattaaatacctttcgaagtattagttcatgggtgcaatcgatatcttttagaagtattagttcatggtataataaaaagagatgatgtcc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
38709646 |
acatggatcaattaaatacctttcgaagtattagttcatgggtgcaatcgatatcttttagaagtattagttcatggtataataaaaagaaatgatgtcc |
38709547 |
T |
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