View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18884_high_17 (Length: 240)
Name: NF18884_high_17
Description: NF18884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18884_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 47200150 - 47200374
Alignment:
| Q |
1 |
cctactttccacataacataaactaatctaaacacacaacaaatgttcttactaacatttgtcattnnnnnnnnnncactaaatgttctgatatttaaat |
100 |
Q |
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| T |
47200150 |
cctactttccacacaacataaactaatctaaacacacaacaaatgttcttactgacatttgtcattaaaaaaaaaacactaaatgttctgatatttaaat |
47200249 |
T |
|
| Q |
101 |
gcatcatcaacaacaacgagacaacaataaacttcagaaagttgacaaaagcatacattaaaaagtaaagaccttcaaatggtgttcgatcatgaacagg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
47200250 |
gcatcatcaacaacaacgagacaacaataaacttcagaaagttgacaaaagcatacattaaaaagcaaagaccttcaaatggtgttcgatcatgaacagg |
47200349 |
T |
|
| Q |
201 |
aatatgcaagcaacgaacttcaaaa |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
47200350 |
aatatgcaagcaacgaacttcaaaa |
47200374 |
T |
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