View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18884_high_20 (Length: 211)
Name: NF18884_high_20
Description: NF18884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18884_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 39869785 - 39869606
Alignment:
| Q |
13 |
gagatgaatgaatactcaaataccaagtttaatacttttttaaaagggaagaaatttggcgagctaaataactagcaagtcaccttctgaataactgttc |
112 |
Q |
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| T |
39869785 |
gagatgaatgaatactcaaataccaagtttaatacttttttaaaagggaagaaatttggcgagctaaataactagcaagtcaccttctgaataactgttc |
39869686 |
T |
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| Q |
113 |
aggttcttcctcctcctctgcttcttcatggtcaaagtgattcacagttgttgtatctttgctagaaagaaggtcatcat |
192 |
Q |
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| T |
39869685 |
aggttcttcctcctcctctgcttcttcatggtcaaagtgattcacagttgttgtatctttgctagaaagaaggtcatcat |
39869606 |
T |
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