View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18885_high_6 (Length: 302)
Name: NF18885_high_6
Description: NF18885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18885_high_6 |
 |  |
|
| [»] scaffold0573 (2 HSPs) |
 |  |  |
|
| [»] scaffold0237 (1 HSPs) |
 |  |  |
|
| [»] scaffold0572 (1 HSPs) |
 |  |  |
|
| [»] scaffold0054 (2 HSPs) |
 |  |  |
|
| [»] scaffold0429 (1 HSPs) |
 |  |  |
|
| [»] scaffold0014 (2 HSPs) |
 |  |  |
|
| [»] scaffold0110 (1 HSPs) |
 |  |  |
|
| [»] scaffold0019 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 70)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 24886673 - 24886392
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24886673 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
24886574 |
T |
 |
| Q |
118 |
cttgtcgatataatgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtgaaaaaccatcatgttgac-aaggcaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||| |
|
|
| T |
24886573 |
cttgtcgatataatgcatgatagaggtcagccacctgatataattacttacaattctatattggatgctttatgaaaaaccatcatg-tgacaaaggcaa |
24886475 |
T |
 |
| Q |
217 |
ttgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24886474 |
ttgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
24886392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 130 - 299
Target Start/End: Original strand, 24730858 - 24731028
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24730858 |
atgcatgatagaggtcaaccacctaatataataacttacaattctatattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaa |
24730957 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
24730958 |
caaatttgaaagaccagggtattcgaccagatatgtacacatacactgttcttatcaagggattgtgccaa |
24731028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 130 - 299
Target Start/End: Complemental strand, 24890242 - 24890072
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24890242 |
atgcatgatagaggtcagccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaa |
24890143 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
24890142 |
caaatttgaaagaccagggtattcgaccagatatgtacacatacaccattcttatcaagggactgtgccaa |
24890072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 28926543 - 28926389
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28926543 |
atgcatgatagaggtcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaa |
28926444 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||||||| ||| |||| |||||||||||||||||||| |||| |
|
|
| T |
28926443 |
caaaattgaaagaccagggtcttcaaccaaatatgtacacatacactattcttat |
28926389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29887300 - 29887454
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||| || ||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
29887300 |
atgcatgatagaggtcaaccacctgatataattacttacagttctttattagatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaa |
29887399 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
29887400 |
caaatttgaaagaccagggtattcgaccaaatatgtacacatacactattcttat |
29887454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 29882438 - 29882606
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||| |||| || | ||||||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
29882438 |
atgcatgatcgagggcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgttgacaaagcaattgcattattaa |
29882537 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgcc |
297 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
29882538 |
caaaattgaaaggccaaggtattcgaccagatatgaacacatacactattcttgtcaagggattgtgcc |
29882606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 29909594 - 29909762
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||| |||| || | ||||||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
29909594 |
atgcatgatcgagggcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgttgacaaagcaattgcattattaa |
29909693 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgcc |
297 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
29909694 |
caaaattgaaaggccaaggtattcgaccagatatgaacacatacactattcttgtcaagggattgtgcc |
29909762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 30060154 - 30060009
Alignment:
| Q |
134 |
atgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaa |
232 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30060154 |
atgatagaggtcaactacctgatataattacttacaattctatattaaatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaa |
30060055 |
T |
 |
| Q |
233 |
attgaaagaccagggtattcgaccagatatgtacacatacactatt |
278 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||| |||||||| |
|
|
| T |
30060054 |
attgaaagaccagggtatccgaccaaatatttacacacacactatt |
30060009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 29835236 - 29835372
Alignment:
| Q |
148 |
ccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagg |
246 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29835236 |
ccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaaattgaaagaccagg |
29835335 |
T |
 |
| Q |
247 |
gtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
29835336 |
gtattcgaccaaatatgtacacatacactattcttat |
29835372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 29894574 - 29894710
Alignment:
| Q |
148 |
ccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagg |
246 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29894574 |
ccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaaattgaaagaccagg |
29894673 |
T |
 |
| Q |
247 |
gtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
29894674 |
gtattcgaccaaatatgtacacatacactattcttat |
29894710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29073766 - 29073920
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29073766 |
atgcatgatagaggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaa |
29073865 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| |||||||||||||| |||| |
|
|
| T |
29073866 |
caaaattgaaagaccaaggtattcgaccaactatgcacacatacactattcttat |
29073920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29078530 - 29078684
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29078530 |
atgcatgatagaggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaa |
29078629 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| |||||||||||||| |||| |
|
|
| T |
29078630 |
caaaattgaaagaccaaggtattcgaccaactatgcacacatacactattcttat |
29078684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29106339 - 29106493
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29106339 |
atgcatgatagaggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaa |
29106438 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| |||||||||||||| |||| |
|
|
| T |
29106439 |
caaaattgaaagaccaaggtattcgaccaactatgcacacatacactattcttat |
29106493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 130 - 299
Target Start/End: Complemental strand, 29357975 - 29357805
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||| ||||| ||||||||| ||||||||| |||||||| || ||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
29357975 |
atgcatgatagaggtcaaccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaatgcaattgcgttattaa |
29357876 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
|| | ||||| |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
29357875 |
cacagatgaaaaaccagggtattcaaccaaatatgtacacatacactattcttatcaagggattgtgccaa |
29357805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 29866670 - 29866806
Alignment:
| Q |
148 |
ccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagg |
246 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
29866670 |
ccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaatttgaaagaccagg |
29866769 |
T |
 |
| Q |
247 |
gtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
29866770 |
gtattcgaccaaatatgtacacatacactattcttat |
29866806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29905642 - 29905796
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| || |||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
29905642 |
atgcatgatagaggtcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggttgacaaggcaatcacattattaa |
29905741 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||||||||| ||| |||| |
|
|
| T |
29905742 |
caaaattgaaagacctgggtattcaaccaaatatgtacacatacaccattcttat |
29905796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 29903249 - 29903417
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||| |||| || | ||||||||||||||| |||||||||||||| |||||||| || ||||| ||||||| || ||| |||||||| ||||||| |
|
|
| T |
29903249 |
atgcatgatcgagggcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgctggcaaagcaattgcgttattaa |
29903348 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgcc |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||| ||| || ||||||||||||||| |
|
|
| T |
29903349 |
caaaattgaaagaccagggtattcgaccaaatatgaacacatacaccattcttgtcaagggattgtgcc |
29903417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 29211389 - 29211235
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtgaaaaacc-atcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||| ||||| ||||||||| ||||||||| |||||||| || |||||| ||| |||||||||||| |||||||||||| |
|
|
| T |
29211389 |
atgcatgatagaggtcaaccacctaatatagttacttacagttctatattggatgctttatgcaaaacccatcgggttgacaaggcagttgcattattaa |
29211290 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||| |||||||||||||| |||| |
|
|
| T |
29211289 |
caaaattgaaagaccaaggtattcgaccaaatatgcacacatacactattcttat |
29211235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 30118737 - 30118583
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| || |||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
30118737 |
atgcatgatagaggtcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggttgacaaggcaatcacattattaa |
30118638 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
||||||||||||||| ||| |||| |||| |||||||||||||||| ||| |||| |
|
|
| T |
30118637 |
caaaattgaaagacctgggaattcaaccaaatatgtacacatacaccattcttat |
30118583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 24263748 - 24263594
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||| |||| || | |||||||||||| || |||| ||||||||| ||||| || || |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24263748 |
atgcatgatcgagggcaacaacctgatataatcacgtacagttctatattggatgccttatgcaaaaaccatctggttgacaaggcaattgcattattaa |
24263649 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
24263648 |
taaaattgaaagaccagggtattcgaccaaatatgtacacatacactattcttat |
24263594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 30127051 - 30126897
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| || ||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
30127051 |
atgcatgatagaggtcaaccacctgatataattatttacaattctatattggatgctttatgcaaaaaccatcaggttgacaaagcaattgcattgttaa |
30126952 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
| ||||| ||| |||||||||||| |||| | ||||||||||||||||| |||| |
|
|
| T |
30126951 |
cgaaatttaaaaaccagggtattcaaccaagtgtgtacacatacactattcttat |
30126897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 299
Target Start/End: Original strand, 29116264 - 29116434
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtgaaaaa-ccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| || |||| |||||| |||||||| ||||||||||| |||| |
|
|
| T |
29116264 |
atgcatgatagaggtgtaccacctactatacgtacttacaattctatattagatgctttatgcaaaatccatcaagttgacaaagcaattgcattgttaa |
29116363 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
| |||||||||||| ||||||||| |||| ||||||||||||||| |||| ||||||| ||| |||||||| |
|
|
| T |
29116364 |
cgaaattgaaagacaagggtattcaaccaaatatgtacacatacagtattcttatcaaaggactgtgccaa |
29116434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 130 - 278
Target Start/End: Complemental strand, 30061991 - 30061842
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| || ||| ||||||| ||||||||||||| |||||||| |
|
|
| T |
30061991 |
atgcatgatagaggtcaaccacctaatataattacttacaattctatattggatgctttatgcaaacgccatcatcttgacaaggcaatcacattattat |
30061892 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatt |
278 |
Q |
| |
|
||||||||||||| |||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
30061891 |
caaaattgaaagatcagggtattcaaccgaatatttacacatacactatt |
30061842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 299
Target Start/End: Original strand, 29099346 - 29099516
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtgaaaaacc-atcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| || |||||| |||| |||||||| ||||||||||| |||| |
|
|
| T |
29099346 |
atgcatgatagaggtgtaccacctaatatatgtacttacaattctatattagatgctttatgcaaaacccatcaagttgacaaagcaattgcattgttaa |
29099445 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
| ||||| |||||| ||||| ||| ||||||||| | |||||||| |||| ||||||| ||| |||||||| |
|
|
| T |
29099446 |
cgaaatttaaagacaagggttttcaaccagatatatccacatacagtattcttatcaaaggactgtgccaa |
29099516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29929276 - 29929430
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtgaaaaacc-atcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| || |||||| |||| |||||||| ||||||||||| |||| |
|
|
| T |
29929276 |
atgcatgatagaggtgtagcacctaatatagttacttacaattctatattagatgctttatgcaaaacccatcaggttgacaaagcaattgcattgttaa |
29929375 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
| ||||| |||||||||||||||| |||| | ||||||||||||||||| |||| |
|
|
| T |
29929376 |
cgaaattcaaagaccagggtattcaaccaagtgtgtacacatacactattcttat |
29929430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 118 - 284
Target Start/End: Original strand, 29946428 - 29946595
Alignment:
| Q |
118 |
cttgtcgatataatgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaa |
216 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||| |||| ||| || || ||| || ||||||||||||||| |
|
|
| T |
29946428 |
cttgtcgatgaaatgcatgatagaggtcaaccacctaatataattacttacaactctatattggatgttttatgcaagaactatgatgttgacaaggcaa |
29946527 |
T |
 |
| Q |
217 |
ttgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatc |
284 |
Q |
| |
|
||| ||| ||||||||| | |||||||||| ||||| |||| ||||||||| |||| |||| ||||| |
|
|
| T |
29946528 |
ttgtatttttaacaaaacttaaagaccaggatattcaaccaagtatgtacacgtacaatattcttatc |
29946595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 24890402 - 24890300
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||| ||| |||||||| | ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
24890402 |
taatggattttgtaagattaaaatggtggatgaagccataaatctctttgaagaaatgcgttgtagaaaaattattcctaatgtggtaacttacagttcc |
24890303 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
24890302 |
ctt |
24890300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 29348594 - 29348440
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
29348594 |
atgcatgatagaggtgtaccacatgataaaattacttacaattctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttgttaa |
29348495 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
| || ||||||| | || |||| ||||||||||||||||||||||||| |||| |
|
|
| T |
29348494 |
cgaagatgaaagatgaaggaattcaaccagatatgtacacatacactattcttat |
29348440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 29085021 - 29085175
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtgaaaaacc-atcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||||| | |||||| |||| |||||||| ||||||||||| ||| |
|
|
| T |
29085021 |
atgcatgatagaggtgtaccacctaatatacttacttacaattctataatagatgctttattcaaaacccatcaagttgacaaagcaattgcattgataa |
29085120 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
| ||||| |||||||||||||||| |||| |||||||||||||||||| |||| |
|
|
| T |
29085121 |
cgaaatttaaagaccagggtattcaaccaagcatgtacacatacactattcttat |
29085175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 130 - 296
Target Start/End: Original strand, 29889733 - 29889900
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||||| ||||| | |||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||||| | || |
|
|
| T |
29889733 |
atgcatgatagaggtgtaccacctaatatagtcacttacaattctatattagatgctttatgcaaaacccatcaggttgacaaaacaattgcattgtcaa |
29889832 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgc |
296 |
Q |
| |
|
| ||||| ||||||||| |||||| |||| || |||| |||||||||||| |||| | ||||||||| |
|
|
| T |
29889833 |
cgaaatttaaagaccagagtattcaaccaaatgtgtaaacatacactattcttattgatggattgtgc |
29889900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 29912050 - 29912145
Alignment:
| Q |
204 |
gttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||| || ||||||||||||||||| |
|
|
| T |
29912050 |
gttgacaaagcaattacattattaacaaaattgaaaggccaaggtattcgaccagatatgaacacatacaccattcttgtcaagggattgtgccaa |
29912145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 25451121 - 25451275
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgt-gaaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| ||||| ||||| ||||||||| ||||||||| |||||||| | |||||| ||||| ||||| | ||||||| |||||| | |
|
|
| T |
25451121 |
atgcatgatagaggtcaaccaccaaatatatttacttacagttctatattggatgctttattgaaaaaacatcaggttgaagaagcaattgaattattta |
25451220 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
| |||| |||||| ||||||||| |||| || |||||||||||||||||||||| |
|
|
| T |
25451221 |
aagaatttaaagacaagggtattcaaccaaatgtgtacacatacactatttttat |
25451275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 29887140 - 29887242
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||| ||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
29887140 |
taatggattttgtaagattaaaatgaccgatgaagccatgaatctctttgaagaaatgcattgtagaaaactaattcctgatgtggtaacttacaattcc |
29887239 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
29887240 |
ctt |
29887242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 130 - 294
Target Start/End: Original strand, 29876828 - 29876993
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
|||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| || |||| ||||||||||| ||| | ||||||||||||| |
|
|
| T |
29876828 |
atgcatgatagaggccaaccacctaatataattacttacaattctatattgtatgctttatgcaaaattcatcatgttgagaagacgattgcattattaa |
29876927 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgt |
294 |
Q |
| |
|
|||| | |||| ||||||||| ||||||| |||||| ||||||||| ||| ||| ||||||| |
|
|
| T |
29876928 |
gaaaaattaaagtgaagggtattcaaccagatgcgtacacgtacactattcttaccaatggattgt |
29876993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 29905482 - 29905590
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| |||||| | | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
29905482 |
taatgggttttgtaagattaaaaaggttgatgaagccataaatctctttgaagaaatgcattgtagaaaattaattcctgatgtggtaacttacaattcc |
29905581 |
T |
 |
| Q |
118 |
cttgtcgat |
126 |
Q |
| |
|
||| ||||| |
|
|
| T |
29905582 |
cttatcgat |
29905590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 30118897 - 30118789
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| |||||| | | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
30118897 |
taatgggttttgtaagattaaaaaggtcgatgaagccataaatctctttgaagaaatgcattgtagaaaattaattcctgatgtggtaacttacaattcc |
30118798 |
T |
 |
| Q |
118 |
cttgtcgat |
126 |
Q |
| |
|
||| ||||| |
|
|
| T |
30118797 |
cttatcgat |
30118789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 29835066 - 29835160
Alignment:
| Q |
26 |
tttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
29835066 |
tttgtaagattaaaatgacggatgaagccatgaatctctttgaagaaatgcattgcagaaaaattattcctgatgtggtaacttacaattccctt |
29835160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 29866500 - 29866594
Alignment:
| Q |
26 |
tttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
29866500 |
tttgtaagattaaaatgacggatgaagccatgaatctctttgaagaaatgcattgcagaaaaattattcctgatgtggtaacttacaattccctt |
29866594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 31000094 - 30999992
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||| ||||||||||| ||||| | ||||| ||| |||||||| | |
|
|
| T |
31000094 |
taatggattttgcaagattaaaatggtggatgaagccataaatctctttgaagaaatgcgttgtagaaaaattattcgtaatgtgttaatttacagtttc |
30999995 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
30999994 |
ctt |
30999992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 28926703 - 28926595
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| ||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
28926703 |
taatgggttttgtaagattaaaatgaccgatgcagccatgaatctctttgaagaaatgcattgcagaaaaattattcctaatgtggtaacttacaattcc |
28926604 |
T |
 |
| Q |
118 |
cttgtcgat |
126 |
Q |
| |
|
||| ||||| |
|
|
| T |
28926603 |
cttatcgat |
28926595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 24730698 - 24730800
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
||||||||| || ||| |||||||| | |||||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
24730698 |
taatggattatgtaagattaaaatggtggatgaagctgtaaatctctttgaagaaatgcgttgtagaaaaattattcctaatgtggtaacttacaattcc |
24730797 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
24730798 |
ctt |
24730800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 29366417 - 29366284
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
29366417 |
atgcatgatagaggtgtaccacatgataaaattacttacaattctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttgttaa |
29366318 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatat |
262 |
Q |
| |
|
| || ||||||| | || |||| ||||||||| |
|
|
| T |
29366317 |
cgaagatgaaagatgaaggaattcaaccagatat |
29366284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 29914070 - 29914163
Alignment:
| Q |
204 |
gttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgcc |
297 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||| |||||||||||||||| |||| | ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
29914070 |
gttgacaaagcaattgcattgttaacgaaatttaaagaccagggtattcaaccaagtgtgtacacatacactattcttgtcaagggattgtgcc |
29914163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 277
Target Start/End: Original strand, 30149530 - 30149678
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| ||| | || ||||| |||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
30149530 |
atgcatgatagaggtcaaccaaccgacataatcacttacaattctttatttgatggattgtgcaaaaaccatcaggttgacagggcaattgcattattaa |
30149629 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactat |
277 |
Q |
| |
|
||| | ||||||||||| |||| ||| |||||| |||||||||| |
|
|
| T |
30149630 |
aaaagatcaaagaccagggaattcagccaagtatgtattcatacactat |
30149678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 30999934 - 30999838
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattat |
225 |
Q |
| |
|
||||||||||||||||| |||||| ||||| ||| ||||| ||||||||| |||||||| || |||||||||| ||||||| ||||||||||||||| |
|
|
| T |
30999934 |
atgcatgatagaggtcaaccacctaatatagttatttacagttctatattggatgctttatgcaaaaaccatcgtgttgaccaggcaattgcattat |
30999838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 29949860 - 29949745
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagata |
261 |
Q |
| |
|
|||||||||||| ||||||||||||| || ||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||| ||| ||| |
|
|
| T |
29949860 |
acttacaattctttattagatgctttatgcaaaaaccatcaggttgacaaggcgattgcattattaaaaaagataaaagaccaaggaattcagccaaata |
29949761 |
T |
 |
| Q |
262 |
tgtacacatacactat |
277 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
29949760 |
tgtatacatacactat |
29949745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 29953657 - 29953542
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagata |
261 |
Q |
| |
|
|||||||||||| |||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||| || |||||||||| || |||| ||| ||| |
|
|
| T |
29953657 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggttgacaaggcgattgcattattaaagaagatgaaagaccaagggattcagccaaata |
29953558 |
T |
 |
| Q |
262 |
tgtacacatacactat |
277 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
29953557 |
tgtatacatacactat |
29953542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 29946280 - 29946382
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||| ||| |||||||| | ||||||||||| ||||||| ||||||||||||||| | | ||| | ||||| ||||||||||||||| |||| |
|
|
| T |
29946280 |
taatggattttgtaagattaaaatggtggatgaagccatgaatctctttgaagaaatgcattgcaaacaaatttttcctaatgtggtaacttacaattcc |
29946379 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
29946380 |
ctt |
29946382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 29897920 - 29898028
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
29897920 |
taatgggttttgtaagagtaaaatgaccgatgaagccatgaatctctttgaagaaatgcattgtagaaagctaattcctgatgtggtaacttacaattct |
29898019 |
T |
 |
| Q |
118 |
cttgtcgat |
126 |
Q |
| |
|
||| ||||| |
|
|
| T |
29898020 |
cttatcgat |
29898028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 29898080 - 29898168
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaat |
217 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||||| || ||||||||||| |||||||||||||| |
|
|
| T |
29898080 |
atgcatgatagaggtcaaccacctaatataattacgtacagttctatattgaatgctttatgcaaaaaccatcaggttgacaaggcaat |
29898168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 30060318 - 30060216
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| |||||| | | ||||||||||| ||||||| ||||||||||||||| | ||| | |||||||||||||||||| |||| |||| |
|
|
| T |
30060318 |
taatgggttttgtaagattaaaaaggtcgatgaagccatgaatctctttgaagaaatgcattgcaaaaacattattcctgatgtggtaacatacaattcc |
30060219 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
30060218 |
ctt |
30060216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 30127211 - 30127109
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| |||||| | | | ||||||||| ||||||| |||||||||||| || | ||||| ||||||||||||||||||||| |||||| |
|
|
| T |
30127211 |
taatgggttttgtaagattaaaagggtgggtgaagccattaatctctttgaagaaatgcaatgcaaaaaaattattcctgatgtggtaacttatagttcc |
30127112 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
30127111 |
ctt |
30127109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 29348747 - 29348652
Alignment:
| Q |
25 |
ttttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
||||| ||| |||||| | | ||||||||||| ||||||| | ||||||||||||| | ||| | ||||||||||||||||||||||| ||||||| |
|
|
| T |
29348747 |
ttttgtaagattaaaaaggttgatgaagccatgaatctctttaaagaaatgcattgcaaaaacattattcctgatgtggtaacttacaattccctt |
29348652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 16702123 - 16702009
Alignment:
| Q |
158 |
taattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgacc |
256 |
Q |
| |
|
|||| ||||||||||| ||||| ||||||| || |||||||||||||||||||||||||||||||| | | || || |||||||| || |||| ||| |
|
|
| T |
16702123 |
taatcacttacaattccttattacatgctttatgtaaaaaccatcatgttgacaaggcaattgcattggtcaacaattttaaagaccaaggcattcaacc |
16702024 |
T |
 |
| Q |
257 |
agatatgtacacata |
271 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
16702023 |
agatatgcacacata |
16702009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 30053442 - 30053575
Alignment:
| Q |
142 |
ggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaag |
240 |
Q |
| |
|
||||| ||| || ||||||| |||||||||||| ||||| ||| ||||| ||||||||||| ||||||||||||||||| || ||||| || |||||| |
|
|
| T |
30053442 |
ggtcaaccagctaatataatcacttacaattctttattatatggattgtgcaaaaaccatcaggttgacaaggcaattgcgttgttaacgaagatgaaag |
30053541 |
T |
 |
| Q |
241 |
accagggtattcgaccagatatgtacacatacac |
274 |
Q |
| |
|
|| | || |||| |||||||||| |||||||| |
|
|
| T |
30053542 |
acgaaggaattcagccagatatgtttacatacac |
30053575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 24271857 - 24271793
Alignment:
| Q |
232 |
aattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtgc |
296 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||||||| |||| | ||||||||| |
|
|
| T |
24271857 |
aattgaaagaccagggtattcgaccaaatatgttcacatacactattcttattgatggattgtgc |
24271793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 29099193 - 29099288
Alignment:
| Q |
25 |
ttttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
||||| ||| |||||| | | ||||||||||| ||||||| | ||||||||||| | | ||| | |||||||||||| |||||||||||||||||| |
|
|
| T |
29099193 |
ttttgtaagattaaaaagtttgatgaagccatgaatctctttaaagaaatgcatcgcaaaaacattattcctgatgtcgtaacttacagttccctt |
29099288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 29116111 - 29116206
Alignment:
| Q |
25 |
ttttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
||||| ||| |||||| | | ||||||||||| ||||||| | ||||||||||| | | ||| | |||||||||||| |||||||||||||||||| |
|
|
| T |
29116111 |
ttttgtaagattaaaaagtttgatgaagccatgaatctctttaaagaaatgcatcgcaaaaacattattcctgatgtcgtaacttacagttccctt |
29116206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 29366570 - 29366475
Alignment:
| Q |
25 |
ttttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
||||| ||| |||||| | | ||||||||||| ||||||| | ||||||||||||| | || | ||||||||||||||||||||||| ||||||| |
|
|
| T |
29366570 |
ttttgtaagattaaaaaggtcgatgaagccatgaatctctttaaagaaatgcattgcaataacattattcctgatgtggtaacttacaattccctt |
29366475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 24271943 - 24271853
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattg |
219 |
Q |
| |
|
||||||||| |||| || | |||||||||||| || |||| ||||||||| |||| ||| || ||||||||||| |||||||||||||||| |
|
|
| T |
24271943 |
atgcatgatcgagggcaacaacctgatataatcacgtacagttctatattggatgatttatgcaaaaaccatcaggttgacaaggcaattg |
24271853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 29876668 - 29876770
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||| || ||||||| ||||||||||||||| | ||| ||||||||| | || |||| |||||| |
|
|
| T |
29876668 |
taatggattttgtaaggttaaaatgatggatgaagcaatgaatctcttccaagaaatgcattgtaaagaaataattcctgatacgatagcttatagttcc |
29876767 |
T |
 |
| Q |
118 |
ctt |
120 |
Q |
| |
|
||| |
|
|
| T |
29876768 |
ctt |
29876770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 274
Target Start/End: Original strand, 30135128 - 30135274
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatg-ttgacaaggcaattgcattatta |
227 |
Q |
| |
|
|||||||| |||||||| || || || | || |||||||||||| |||| ||||||||||| ||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
30135128 |
atgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattatta |
30135227 |
T |
 |
| Q |
228 |
acaaaattgaaagaccagggtattcgaccagatatgtacacatacac |
274 |
Q |
| |
|
|| || | |||||||| ||||||| ||| || |||| |||||||| |
|
|
| T |
30135228 |
acgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
30135274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 15727152 - 15727043
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagata |
261 |
Q |
| |
|
||||||||||| || |||||||||| || ||||||||||| |||||||||||||||| |||| | | ||| | ||||||||||| |||| | |||||| |
|
|
| T |
15727152 |
acttacaattcgttaatagatgctttatgcaaaaaccatcacgttgacaaggcaattgtattagtcaagaaaatcaaagaccagggcattcaatcagata |
15727053 |
T |
 |
| Q |
262 |
tgtacacata |
271 |
Q |
| |
|
|||| ||||| |
|
|
| T |
15727052 |
tgtatacata |
15727043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 274
Target Start/End: Original strand, 24898080 - 24898225
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| | | |||| ||||| | ||||| || |||| ||||| |||| ||||||||||| ||||||||||||||||| ||||| | |
|
|
| T |
24898080 |
atgcatgatagaggtcaacaagctgacataatcatttacacctcgttattggatgcattgtttaaaaaccatcaagttgacaaggcaattgcgttattga |
24898179 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacac |
274 |
Q |
| |
|
|| | ||||||| ||| ||| ||||||||||| ||||||||| |
|
|
| T |
24898180 |
agaagatcaaagaccggggaattgaaccagatatgttcacatacac |
24898225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 24739191 - 24739103
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaat |
217 |
Q |
| |
|
|||||| ||||||| || || ||||| | || ||||||||||| |||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
24739191 |
atgcataatagaggccaacctgctgatgtgatcacttacaattccttattggatgctttgtgcaaaaaccatcaggttgacaaggcaat |
24739103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 277
Target Start/End: Original strand, 24942239 - 24942351
Alignment:
| Q |
166 |
tacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagatatgt |
264 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||||||| ||||||||||||||| ||||||||| || | |||||||| || |||| ||| |||||| |
|
|
| T |
24942239 |
tacaattccttattggatgctttgttcaaaaaccatcaggttgacaaggcaattacattattaatgaagatcaaagaccaaggaattcagccaaatatgt |
24942338 |
T |
 |
| Q |
265 |
acacatacactat |
277 |
Q |
| |
|
| || |||||||| |
|
|
| T |
24942339 |
atacttacactat |
24942351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 25450967 - 25451065
Alignment:
| Q |
24 |
attttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaata-ttcctgatgtggtaacttacagttcccttgt |
122 |
Q |
| |
|
|||||| ||| |||||||| | |||||||||| || || | |||||||||||| | | || ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25450967 |
attttgtaagattaaaatggtggatgaagccaggaaactttttgaagaaatgcagtcca-aacaaatatttcctgatgtggtaacttacagttcccttgt |
25451065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 29889601 - 29889667
Alignment:
| Q |
46 |
gatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttaca |
112 |
Q |
| |
|
||||||||||| ||||||| | ||||||||||||| | ||| | ||||||| ||||||| ||||||| |
|
|
| T |
29889601 |
gatgaagccatgaatctctttaaagaaatgcattgcaaaaacattattcctaatgtggtgacttaca |
29889667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 21160621 - 21160524
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattatt |
226 |
Q |
| |
|
|||||| ||||||| || || ||||| | || ||||||||||| |||| ||||||||||| ||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
21160621 |
atgcataatagaggccaacctgctgatgtgatcacttacaattccttattggatgctttgtgcaaaaaccatcaggttgacatggcaatcacattatt |
21160524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 30062109 - 30062049
Alignment:
| Q |
60 |
tctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
||||| ||||||||||||||| | ||| | |||||| ||||||||| |||||| ||||||| |
|
|
| T |
30062109 |
tctctttgaagaaatgcattgcaaaaacattattcccgatgtggtagcttacaattccctt |
30062049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0573
Description:
Target: scaffold0573; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 4140 - 4294
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||| || |||||||||| | ||||||||||||||||||||||| |
|
|
| T |
4140 |
atgcatgatagaggtcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatccaggtgacaaggcaattgcattattaa |
4239 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttat |
283 |
Q |
| |
|
|||||||||||||||||||| ||| |||| |||||||||||||||||||| |||| |
|
|
| T |
4240 |
caaaattgaaagaccagggtcttcaaccaaatatgtacacatacactattcttat |
4294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 3980 - 4088
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||| ||||| ||| ||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
3980 |
taatgggttttgtaagattaaaatgaccgatgcagccatgaatctctttgaagaaatgcattgcagaaaaattattcctaatgtggtaacttacaattcc |
4079 |
T |
 |
| Q |
118 |
cttgtcgat |
126 |
Q |
| |
|
||| ||||| |
|
|
| T |
4080 |
cttatcgat |
4088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 299
Target Start/End: Original strand, 22366 - 22516
Alignment:
| Q |
150 |
acctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| ||||| |||||| ||||||||||||||||||||| ||| ||| |
|
|
| T |
22366 |
acctgatataattacttacaattctatattggatgctttatgcaaaaaacatcatgtggacaaagcaattacattattaacaaaattgaaaggccaaggt |
22465 |
T |
 |
| Q |
249 |
attcgaccagatatgtacacatacactatttttatcaagggattgtgccaa |
299 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||||||||||||||| |
|
|
| T |
22466 |
attcgaccagatatgaacacatacaccattcttgtcaagggattgtgccaa |
22516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 295
Target Start/End: Complemental strand, 15062884 - 15062706
Alignment:
| Q |
118 |
cttgtcgatataatgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaa |
216 |
Q |
| |
|
||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| | || |||||| |||||||||| ||||||| |
|
|
| T |
15062884 |
cttgtcgatgaaatgcatgatagaggtcaaccatctaatataattacttacaattctatattagatgctatatgcaaaaacaatcatgttgataaggcaa |
15062785 |
T |
 |
| Q |
217 |
ttgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtg |
295 |
Q |
| |
|
||| |||||||||||| | ||||| ||||||||| ||||||||| | ||| || ||| || |||| || |||||||| |
|
|
| T |
15062784 |
ttgtgttattaacaaaaattaaagagaagggtattcaaccagatattttcacgtatactgttcttattaatggattgtg |
15062706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 15063032 - 15062928
Alignment:
| Q |
18 |
taatggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttcc |
117 |
Q |
| |
|
|||||||||||| ||| |||||||| ||||||||||||| || |||| ||||||||||||||||| | ||| | |||| ||||||||||||||| |||| |
|
|
| T |
15063032 |
taatggattttgtaagattaaaatggtagatgaagccatgaagctctttgaagaaatgcattgtaaacaaatttttccaaatgtggtaacttacaattcc |
15062933 |
T |
 |
| Q |
118 |
cttgt |
122 |
Q |
| |
|
||||| |
|
|
| T |
15062932 |
cttgt |
15062928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 9e-33; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 24219231 - 24219116
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
24219231 |
atgcatgatagaggtcaaccacctaatataattacttacaattctttattggatgctttatgcaaaaaccatcatgttgacaaggcaattgaattgttaa |
24219132 |
T |
 |
| Q |
229 |
caaaattgaaagacca |
244 |
Q |
| |
|
||||| | |||||||| |
|
|
| T |
24219131 |
caaaacttaaagacca |
24219116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 24226823 - 24226911
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaat |
217 |
Q |
| |
|
||||||||||||||||| ||| || | ||||| |||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
24226823 |
atgcatgatagaggtcaaccagctaacataatcacttacaattctttattagatggattgtgcaaaaaccatcaggttgacaaggcaat |
24226911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 268
Target Start/End: Original strand, 11991314 - 11991454
Alignment:
| Q |
129 |
aatgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcatta-tt |
226 |
Q |
| |
|
||||||||||| ||||| ||| | ||||| | |||||||| | | || |||||||||| || |||||||||||||||||| |||| ||||||||| || |
|
|
| T |
11991314 |
aatgcatgataatggtcaaccagccaatatattcacttacaactgtttaatagatgctttatgtaaaaaccatcatgttgaccaggctattgcattagtt |
11991413 |
T |
 |
| Q |
227 |
aacaaaattgaaagaccagggtattcgaccagatatgtacac |
268 |
Q |
| |
|
|| |||||| ||||| || || |||| ||||||||||||||| |
|
|
| T |
11991414 |
aagaaaatt-aaagatcaaggcattcaaccagatatgtacac |
11991454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 24219388 - 24219289
Alignment:
| Q |
21 |
tggattttgcaaggttaaaatgatagatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttacagttccctt |
120 |
Q |
| |
|
||||||||| ||| |||||||| | ||||||||||| || |||| ||||||||||||||| | | ||| | |||| |||||||| || |||| ||||||| |
|
|
| T |
24219388 |
tggattttgtaagattaaaatggtggatgaagccatgaaactctttgaagaaatgcattgcaaacaaatttttcccgatgtggtgacgtacaattccctt |
24219289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 16351086 - 16351197
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcatta-ttaacaaaattgaaagaccagggtattcgaccagat |
260 |
Q |
| |
|
|||||||||||| | |||||| ||| || |||||||| |||||||||||||| ||||||||| |||| |||||| ||||| || || |||| |||| || |
|
|
| T |
16351086 |
acttacaattctttgatagatgttttctgcaaaaaccaacatgttgacaaggctattgcattagttaagaaaatt-aaagaacatggcattcaaccaaat |
16351184 |
T |
 |
| Q |
261 |
atgtacacataca |
273 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
16351185 |
atgtgcacataca |
16351197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 33997811 - 33997877
Alignment:
| Q |
46 |
gatgaagccataaatctctatgaagaaatgcattgtagaaaaaatattcctgatgtggtaacttaca |
112 |
Q |
| |
|
||||||||||| ||||||| | |||| |||||||| | ||| | || |||||||||||||||||||| |
|
|
| T |
33997811 |
gatgaagccatgaatctctttaaagagatgcattggaaaaagattaatcctgatgtggtaacttaca |
33997877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 3236 - 3380
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcatta-tta |
227 |
Q |
| |
|
|||| |||||| ||||| ||| |||||||||| ||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||||||| | | |
|
|
| T |
3236 |
atgcgtgatagtggtcaaccagctgatataatcacttacaattcattaatagatgctttatgcaaaaaccatcatgttgacaaggctattgcattagtca |
3335 |
T |
 |
| Q |
228 |
acaaaattgaaagaccagggtattcgaccagatatgtacacataca |
273 |
Q |
| |
|
| |||||| |||||||| || |||| || ||||||||||||||||| |
|
|
| T |
3336 |
agaaaatt-aaagaccaaggcattcaactagatatgtacacataca |
3380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 53592 - 53534
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgcttt |
188 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
53592 |
atgcatgatagaggtcaaccacctaatataattacttacaattctatattaaatgcttt |
53534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 53535 - 53462
Alignment:
| Q |
222 |
ttattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaagggattgtg |
295 |
Q |
| |
|
|||||||||||| |||| ||||||||||||| |||| ||||| | ||| |||||||| ||||||||||| |||| |
|
|
| T |
53535 |
ttattaacaaaactgaaggaccagggtattcaaccaaatatgcatacagacactattcttatcaagggactgtg |
53462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 17251316 - 17251460
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
||||||||||||||||| |||||| || |||| ||||||| |||| | ||||||||||||| |||| |||||| ||||| ||||||||||||||| ||| |
|
|
| T |
17251316 |
atgcatgatagaggtcaaccacctaatgtaataacttacacttctttgatagatgctttgtgcaaaagccatcaagttgataaggcaattgcattactaa |
17251415 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacataca |
273 |
Q |
| |
|
||| | ||||| || ||||||| || ||||||| ||||||| |
|
|
| T |
17251416 |
agaaaattaaagatcaaggtattcaggcaaatatgtatacataca |
17251460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 10130145 - 10130301
Alignment:
| Q |
135 |
tgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaa |
233 |
Q |
| |
|
|||||||||||| | |||| |||||||||||||||||||| |||| ||||||| || |||| || ||||||||||| ||||| ||||| |||| |||| |
|
|
| T |
10130145 |
tgatagaggtcaacaacctaatataattacttacaattctttattgaatgctttatgccaaaatcaccatgttgacaaagcaatcgcattgttaagaaaa |
10130244 |
T |
 |
| Q |
234 |
ttgaaagaccagggtattcgaccagatatgtacacatacactatttttatcaaggga |
290 |
Q |
| |
|
|| ||| ||| ||||||| |||| | | | ||||| |||||| ||||||||||| |
|
|
| T |
10130245 |
tttaaaacccaaggtattcaaccaactttatgtacatatactattcttatcaaggga |
10130301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 19490253 - 19490397
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaa |
228 |
Q |
| |
|
|||| |||||||||||||||||| ||| |||| ||||| |||||| ||||||||||||| || |||| ||||| ||||||||||| |||||| ||| |
|
|
| T |
19490253 |
atgcttgatagaggtcagccacccgatgtaataacttataattctttattagatgctttatgtaaaagtcatcaaaccgacaaggcaatagcattactaa |
19490352 |
T |
 |
| Q |
229 |
caaaattgaaagaccagggtattcgaccagatatgtacacataca |
273 |
Q |
| |
|
||| ||||||| || ||||||| | ||||||| | |||||||| |
|
|
| T |
19490353 |
gcaaaatgaaagatcaaggtattcaagcagatatcttcacataca |
19490397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 44262556 - 44262441
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagata |
261 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||||||||| |||||||||||||| |||||||||| || | |||||||| || |||| ||| ||| |
|
|
| T |
44262556 |
acttacaattccttattggatgctttgtgcaaaaaccatcaggttgacaaggcaatcacattattaacgaagatcaaagaccaaggaattcagccaaata |
44262457 |
T |
 |
| Q |
262 |
tgtacacatacactat |
277 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
44262456 |
tgtatacttacactat |
44262441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 9782588 - 9782690
Alignment:
| Q |
176 |
tattagatgctttgtgaaaaa-ccatcatgttgacaaggcaattgcattattaacaaaattgaaagaccagggtattcgaccagatatgtacacatacac |
274 |
Q |
| |
|
|||| ||||||||||| |||| |||||| ||||||||||||||||| || |||||||| |||||||| | || |||| |||||||||| |||||||| |
|
|
| T |
9782588 |
tattggatgctttgtgcaaaatccatcaggttgacaaggcaattgcgttgttaacaaagatgaaagacgaaggaattcagccagatatgtgtacatacac |
9782687 |
T |
 |
| Q |
275 |
tat |
277 |
Q |
| |
|
||| |
|
|
| T |
9782688 |
tat |
9782690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 6211 - 6343
Alignment:
| Q |
142 |
ggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcatta-ttaacaaaattgaaa |
239 |
Q |
| |
|
||||| |||||||| ||| |||||||||||| || ||||||| || || ||||||||||||||||||||||| |||| |||| | || |||||| ||| |
|
|
| T |
6211 |
ggtcaaccacctgacatatgcacttacaattctttaatagatgcattatgcaaaaaccatcatgttgacaaggctattgtattagtcaagaaaatt-aaa |
6309 |
T |
 |
| Q |
240 |
gaccagggtattcgaccagatatgtacacataca |
273 |
Q |
| |
|
||||| || |||| || | ||||||||||||||| |
|
|
| T |
6310 |
gaccaaggcattcaactaaatatgtacacataca |
6343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 137389 - 137521
Alignment:
| Q |
142 |
ggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattatt-aacaaaattgaaa |
239 |
Q |
| |
|
||||| |||||||| ||| |||| |||| |||| || |||||||||| || |||||| ||||| ||||||| || ||||||||| | || |||||| ||| |
|
|
| T |
137389 |
ggtcaaccacctgacatatttacctacagttctttaatagatgctttatgcaaaaacaatcatcttgacaaagctattgcattagtcaagaaaatt-aaa |
137487 |
T |
 |
| Q |
240 |
gaccagggtattcgaccagatatgtacacataca |
273 |
Q |
| |
|
||||| || |||| |||| ||||||||||||||| |
|
|
| T |
137488 |
gaccaaggcattcaaccaaatatgtacacataca |
137521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 104722 - 104590
Alignment:
| Q |
142 |
ggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcattatt-aacaaaattgaaa |
239 |
Q |
| |
|
||||| |||||| | ||| ||||||||| |||| || |||||||||| || |||||| ||||| ||||||| || || ||||| | || |||||| ||| |
|
|
| T |
104722 |
ggtcaaccacctaacatatttacttacagttctttaatagatgctttatgcaaaaacaatcatcttgacaaagctatgacattagtcaagaaaatt-aaa |
104624 |
T |
 |
| Q |
240 |
gaccagggtattcgaccagatatgtacacataca |
273 |
Q |
| |
|
||||| || |||| |||||||||||||||||||| |
|
|
| T |
104623 |
gaccaaggcattcaaccagatatgtacacataca |
104590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 3643073 - 3643184
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcatta-ttaacaaaattgaaagaccagggtattcgaccagat |
260 |
Q |
| |
|
|||||||||||| | |||||| ||| || |||||||||||| ||||||| || ||||||||| |||| |||||| ||||||||||| |||| |||| | |
|
|
| T |
3643073 |
acttacaattctttgatagatgttttatgcaaaaaccatcatattgacaaagctattgcattagttaagaaaatt-aaagaccagggcattcaaccaagt |
3643171 |
T |
 |
| Q |
261 |
atgtacacataca |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3643172 |
atgtacacataca |
3643184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 8651267 - 8651365
Alignment:
| Q |
129 |
aatgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttg-tgaaaaaccatcatgttgacaaggcaattgcattatt |
226 |
Q |
| |
|
||||||||||||| |||| | | |||| ||||| ||||||| |||| |||| ||||| ||| | ||||||||| | ||| ||| ||||||||||||||| |
|
|
| T |
8651267 |
aatgcatgatagatgtcaacaagctgacataatcacttacacttctttatttgatgcattgttcaaaaaccataaggtttacatggcaattgcattatt |
8651365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 43865 - 43777
Alignment:
| Q |
130 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaat |
217 |
Q |
| |
|
||||||||||||||||| ||| | | || || ||||||| |||| ||||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
43865 |
atgcatgatagaggtcaaccagcgaacattatcacttacagttctttattagatggattgtgcaaaaaccatcaggttgacaaggcaat |
43777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 126086 - 125975
Alignment:
| Q |
163 |
acttacaattctatattagatgctttgtg-aaaaaccatcatgttgacaaggcaattgcatta-ttaacaaaattgaaagaccagggtattcgaccagat |
260 |
Q |
| |
|
||||||||||| || |||||||||| || ||||||||||| |||||||||| ||||||||| |||| |||| | ||||| || || |||| ||||||| |
|
|
| T |
126086 |
acttacaattccttaatagatgctttatgcaaaaaccatcagattgacaaggctattgcattagttaagaaaa-tcaaagatcaaggcattcaaccagat |
125988 |
T |
 |
| Q |
261 |
atgtacacataca |
273 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
125987 |
atgtgcacataca |
125975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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