View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18886_high_6 (Length: 423)

Name: NF18886_high_6
Description: NF18886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18886_high_6
NF18886_high_6
[»] chr3 (7 HSPs)
chr3 (16-408)||(45800711-45801104)
chr3 (48-111)||(54187017-54187082)
chr3 (48-111)||(29235675-29235740)
chr3 (37-111)||(46893434-46893508)
chr3 (42-107)||(50320435-50320502)
chr3 (48-112)||(13639430-13639496)
chr3 (48-82)||(42780698-42780732)
[»] chr7 (6 HSPs)
chr7 (38-111)||(557465-557540)
chr7 (38-80)||(22159043-22159085)
chr7 (38-80)||(22217751-22217793)
chr7 (38-111)||(39237678-39237753)
chr7 (48-111)||(43930047-43930112)
chr7 (48-111)||(47822007-47822072)
[»] chr4 (4 HSPs)
chr4 (38-112)||(37306493-37306569)
chr4 (53-111)||(51475252-51475312)
chr4 (43-111)||(43480265-43480335)
chr4 (38-111)||(50251541-50251616)
[»] chr2 (3 HSPs)
chr2 (42-112)||(37285202-37285274)
chr2 (53-111)||(864188-864248)
chr2 (38-110)||(42635325-42635399)
[»] chr6 (2 HSPs)
chr6 (48-111)||(32439504-32439569)
chr6 (48-111)||(7447654-7447718)
[»] chr5 (6 HSPs)
chr5 (37-100)||(18237235-18237300)
chr5 (48-111)||(30892135-30892200)
chr5 (42-81)||(7585008-7585047)
chr5 (38-111)||(17190697-17190774)
chr5 (44-111)||(32153781-32153850)
chr5 (37-82)||(34320979-34321024)
[»] chr1 (5 HSPs)
chr1 (38-111)||(11709666-11709739)
chr1 (57-111)||(17642388-17642444)
chr1 (48-111)||(19078939-19079004)
chr1 (48-111)||(19126827-19126892)
chr1 (48-111)||(31602087-31602152)
[»] chr8 (4 HSPs)
chr8 (38-107)||(6580847-6580918)
chr8 (43-82)||(38695672-38695711)
chr8 (48-111)||(33440592-33440657)
chr8 (48-81)||(14195233-14195266)


Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 408
Target Start/End: Original strand, 45800711 - 45801104
Alignment:
Q  16 cactttatatatcgatgactattatggacactctctttctaacactcattctcttattggatgaaatatgtgggtaccacacattagaaatggatctggt 115  Q
    |||||||||||| || |||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  45800711 cactttatatattgaggactgttatggacactctgtttctaacactcattcttttattgggtgaaatatgtgggtaccacacattagaaatatatctggt 45800810  T
Q  116 gttagaaagtgagtgttcttagcatttctcttatatannnnnnnnnnnnncttcaattcaacggaccctaagcccaactttagaaaagnnnnnnnttaac 215  Q
    | ||||||| ||||||| ||||||||| |||||||||             ||||||||||||||||||||||||||||||||||||||         |||    
T  45800811 gctagaaagagagtgtttttagcatttttcttatatattttttcttttttcttcaattcaacggaccctaagcccaactttagaaaagaaaaaaaaaaac 45800910  T
Q  216 gaagattaacctgataaatttggagaaattcaatcattagttttagatttttcctttcaaccacttaaaaacatcttattacatctaaatt-aattaaaa 314  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45800911 gaagattaacctggcaaatttggagaaattcaatcattatttttagatttttcctttcaaccacttaaaaacatcttattacatctaaatttaattaaaa 45801010  T
Q  315 cttaataataatacggcaataccgaaattattttgtgttcatataaatttataaacaactcttttcatctatcattatatatcttcatctcctc 408  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45801011 cttattaataatacggcaataccgaaattattttgtgttcatataaatttataaacaacacttttcatctatcattatatatcttcatctcctc 45801104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 54187082 - 54187017
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| ||||||||||| |||| |  |||||||||||||||||||||||||||||    
T  54187082 ctctctctaacactcactctcttattgggtgaagttcatgtgggtaccacacattagaaatggatc 54187017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 29235675 - 29235740
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| ||||||||||| ||||||  ||| || ||||||||||||||||||||||    
T  29235675 ctctctctaacactcactctcttattgggtgaaattcatgaggataccacacattagaaatggatc 29235740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 46893508 - 46893434
Alignment:
Q  37 ttatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||||||||||||||  |||||||||| |||||||||  |||||||  ||||||||| |||||||| ||||||||||    
T  46893508 ttatggacactctct--ctaacactcactctcttattaaatgaaattcatgtgggtaacacacattggaaatggatc 46893434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 50320435 - 50320502
Alignment:
Q  42 gacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatg 107  Q
    |||||||||||||||||| | ||||||||||||| |||| |  || |||||| |||||||||||||||    
T  50320435 gacactctctttctaacatttattctcttattgggtgaagttcatatgggtatcacacattagaaatg 50320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 13639430 - 13639496
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatct 112  Q
    |||| ||||||| ||| ||| ||||||||||||||  ||||||||| |||||||| |||||||||||    
T  13639430 ctctctctaacagtcactcttttattggatgaaattcatgtgggtatcacacattggaaatggatct 13639496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 42780698 - 42780732
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat 82  Q
    |||| ||||||||||||||||||||||||||||||    
T  42780698 ctctctctaacactcattctcttattggatgaaat 42780732  T

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Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 557540 - 557465
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  557540 tatggacactctctttctaacactcactctcttattggatgaaattcatgtgggtatcacacattaaaaatggatc 557465  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 22159043 - 22159085
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaa 80  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  22159043 tatggatactctctttctaacactcattctcttattgggtgaa 22159085  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 22217751 - 22217793
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaa 80  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  22217751 tatggatactctctttctaacactcattctcttattgggtgaa 22217793  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 39237678 - 39237753
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||||||| | |||||| |||||||| ||| ||||||| |||| |  |||||||||||||||||| ||||||||||    
T  39237678 tatggacattttctttccaacactcactcttttattgggtgaagtttatgtgggtaccacacattggaaatggatc 39237753  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 43930112 - 43930047
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| ||| ||||||| ||||||  ||||||||||||||||||  |||||||||    
T  43930112 ctctctctaacactcactcttttattgggtgaaattcatgtgggtaccacacattgaaaatggatc 43930047  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 47822007 - 47822072
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| |||  |||||| ||||||  |||||||||||||||||| ||||||||||    
T  47822007 ctctctctaacactcactcttatattgggtgaaatccatgtgggtaccacacattggaaatggatc 47822072  T

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Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 37306569 - 37306493
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatct 112  Q
    |||||||||| ||||||||||||||| | ||||||||| ||||||  |||||||||||||||||| |||||||||||    
T  37306569 tatggacactttctttctaacactcactttcttattgggtgaaattcatgtgggtaccacacattggaaatggatct 37306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 51475312 - 51475252
Alignment:
Q  53 tctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||||||| || ||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  51475312 tctaacacccactctcttattgggtgaaatccatgtgggtaccacacattggaaatggatc 51475252  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 43480265 - 43480335
Alignment:
Q  43 acactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| |||| ||||||||||| | ||||||||| ||||||  ||||||||||||||||||  |||||||||    
T  43480265 acaccctctctctaacactcactttcttattggctgaaattcatgtgggtaccacacattgaaaatggatc 43480335  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 50251616 - 50251541
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||||||||||||| | | ||||||| ||||||  |||||| |||||||| ||  |||||||||    
T  50251616 tatgaacactctctttctaacactcacttttttattgggtgaaattcatgtggataccacacgttgaaaatggatc 50251541  T

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Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 37285274 - 37285202
Alignment:
Q  42 gacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatct 112  Q
    |||||||||||||||||||||| ||| ||||||| ||||||  |||||||||||||||||| |||||||||||    
T  37285274 gacactctctttctaacactcactcttttattgggtgaaattcatgtgggtaccacacattggaaatggatct 37285202  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 864248 - 864188
Alignment:
Q  53 tctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  864248 tctaacactcactctcttattgggtgaaattcatgtgggtaccacacattagaaatggatc 864188  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 42635325 - 42635399
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggat 110  Q
    |||||||||||||||||||| || || | | ||||||| ||||||  ||||||||||||||||||  ||||||||    
T  42635325 tatggacactctctttctaatacccacttttttattgggtgaaattcatgtgggtaccacacattgaaaatggat 42635399  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 32439504 - 32439569
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| ||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  32439504 ctctctctaacactcactctcttattgggtgaaattcatgtgggtaccacacattggaaatggatc 32439569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 7447718 - 7447654
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||| ||| |||||| |||| ||||||  |||||||||||||||||||||||||||||    
T  7447718 ctctctctaaca-tcactctcttgttgggtgaaattcatgtgggtaccacacattagaaatggatc 7447654  T

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Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 18237300 - 18237235
Alignment:
Q  37 ttatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacatt 100  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||  ||||||||| ||||||||    
T  18237300 ttatggacactctctttctaacactcactcttttattgggtgaaattcatgtgggtatcacacatt 18237235  T

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Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 30892135 - 30892200
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||||||||||||||| ||||||||| | |||| |  |||||||||||||||||||||||||||||    
T  30892135 ctctttctaacactcactctcttattcggtgaagttcatgtgggtaccacacattagaaatggatc 30892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 7585008 - 7585047
Alignment:
Q  42 gacactctctttctaacactcattctcttattggatgaaa 81  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  7585008 gacactctcttttcaacactcattctcttattggatgaaa 7585047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 17190774 - 17190697
Alignment:
Q  38 tatggacactctctttctaacactca--ttctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||| ||||||||||||||   ||||||| |||| ||||||  ||| |||||||||||||||||||||||||    
T  17190774 tatgtacactttctttctaacactctctttctcttgttgggtgaaattcatgcgggtaccacacattagaaatggatc 17190697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 32153850 - 32153781
Alignment:
Q  44 cactctctttctaacactcattctcttattggatgaaa--tatgtgggtaccacacattagaaatggatc 111  Q
    |||||||||||||||||||| ||||||||||| |||||   |||||| | |||||| || ||||||||||    
T  32153850 cactctctttctaacactcactctcttattgggtgaaacccatgtggatcccacactttggaaatggatc 32153781  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 34321024 - 34320979
Alignment:
Q  37 ttatggacactctctttctaacactcattctcttattggatgaaat 82  Q
    ||||| ||||||||||| |||||||||||||||| |||| ||||||    
T  34321024 ttatgaacactctctttttaacactcattctcttgttgggtgaaat 34320979  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 11709739 - 11709666
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||  |||||||||||||||||| ||||||||||    
T  11709739 tatggacactctct--ctaacactcactctcttattgagtgaaattcatgtgggtaccacacattggaaatggatc 11709666  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 17642388 - 17642444
Alignment:
Q  57 acactcattctcttattggatgaaata--tgtgggtaccacacattagaaatggatc 111  Q
    ||||||||| ||||||| | |||||||  ||||||||||||||||||||||||||||    
T  17642388 acactcattttcttattagctgaaatacatgtgggtaccacacattagaaatggatc 17642444  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 19078939 - 19079004
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaa--tatgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| ||||||||||| |||||   ||| |||||||||||||| ||||||||||    
T  19078939 ctctctctaacactcactctcttattgggtgaaagtcatgcgggtaccacacattggaaatggatc 19079004  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 19126827 - 19126892
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaa--tatgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||||||| ||||||||||| |||||   ||| |||||||||||||| ||||||||||    
T  19126827 ctctctctaacactcactctcttattgggtgaaagtcatgcgggtaccacacattggaaatggatc 19126892  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 31602087 - 31602152
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaa--tatgtgggtaccacacattagaaatggatc 111  Q
    |||| |||||||||||||||||||||||||||||   ||||||||  ||||| || ||||||||||    
T  31602087 ctctctctaacactcattctcttattggatgaaactcatgtgggtctcacactttggaaatggatc 31602152  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 6580847 - 6580918
Alignment:
Q  38 tatggacactctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatg 107  Q
    |||||||| ||||||||||||| |||  |||||||||| ||||||  |||||||||||||||||| ||||||    
T  6580847 tatggacagtctctttctaacattcaccctcttattgggtgaaattcatgtgggtaccacacattggaaatg 6580918  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 38695672 - 38695711
Alignment:
Q  43 acactctctttctaacactcattctcttattggatgaaat 82  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  38695672 acactctctttataacactcactctcttattggatgaaat 38695711  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 33440657 - 33440592
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaat--atgtgggtaccacacattagaaatggatc 111  Q
    |||| ||||||| ||| ||||||||||| |||||   |||||||||||||||||| ||||||||||    
T  33440657 ctctctctaacattcactctcttattgggtgaaagtcatgtgggtaccacacattggaaatggatc 33440592  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 14195233 - 14195266
Alignment:
Q  48 ctctttctaacactcattctcttattggatgaaa 81  Q
    |||| |||||||||||||||||||||||||||||    
T  14195233 ctctctctaacactcattctcttattggatgaaa 14195266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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