View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18889_low_15 (Length: 297)

Name: NF18889_low_15
Description: NF18889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18889_low_15
NF18889_low_15
[»] chr6 (49 HSPs)
chr6 (151-287)||(1643836-1643972)
chr6 (151-287)||(31478628-31478764)
chr6 (151-287)||(23414231-23414367)
chr6 (151-287)||(22074630-22074766)
chr6 (154-287)||(16623683-16623816)
chr6 (151-287)||(2076798-2076934)
chr6 (151-287)||(14471548-14471675)
chr6 (151-287)||(22948451-22948578)
chr6 (151-287)||(22952407-22952534)
chr6 (151-287)||(23870895-23871022)
chr6 (151-287)||(23874851-23874978)
chr6 (151-272)||(18918035-18918147)
chr6 (151-287)||(11566196-11566324)
chr6 (151-287)||(12619486-12619614)
chr6 (151-287)||(22862280-22862408)
chr6 (151-287)||(23394402-23394530)
chr6 (153-287)||(16759573-16759699)
chr6 (151-287)||(8243167-8243295)
chr6 (151-287)||(23989254-23989382)
chr6 (151-254)||(19869923-19870017)
chr6 (151-287)||(27556018-27556138)
chr6 (206-280)||(19656817-19656891)
chr6 (151-183)||(1643756-1643788)
chr6 (151-183)||(14471508-14471540)
chr6 (151-183)||(18952947-18952979)
chr6 (151-183)||(18952987-18953019)
chr6 (9-52)||(1643694-1643737)
chr6 (9-52)||(14471446-14471489)
chr6 (9-52)||(18918286-18918329)
chr6 (214-277)||(19774141-19774204)
chr6 (151-277)||(17742687-17742813)
chr6 (151-181)||(23401150-23401180)
chr6 (151-180)||(31478919-31478948)
chr6 (151-183)||(8243088-8243120)
chr6 (151-183)||(11566116-11566148)
chr6 (151-183)||(12619662-12619694)
chr6 (151-183)||(16623379-16623411)
chr6 (151-183)||(16623499-16623531)
chr6 (151-183)||(16759491-16759523)
chr6 (151-183)||(18918195-18918227)
chr6 (151-183)||(19869883-19869915)
chr6 (221-277)||(22805370-22805426)
chr6 (151-183)||(22862200-22862232)
chr6 (151-183)||(23394322-23394354)
chr6 (151-183)||(23989214-23989246)
chr6 (151-183)||(27555978-27556010)
chr6 (151-183)||(31478772-31478804)
chr6 (151-183)||(31478844-31478876)
chr6 (151-183)||(31478996-31479028)
[»] scaffold0109 (3 HSPs)
scaffold0109 (151-287)||(36633-36769)
scaffold0109 (151-183)||(36817-36849)
scaffold0109 (9-52)||(36868-36911)
[»] chr3 (58 HSPs)
chr3 (151-287)||(19774896-19775032)
chr3 (151-287)||(14664979-14665115)
chr3 (151-287)||(4589557-4589693)
chr3 (151-287)||(14668135-14668271)
chr3 (151-287)||(17317772-17317908)
chr3 (151-287)||(15464428-15464564)
chr3 (151-279)||(14670391-14670519)
chr3 (151-287)||(16750985-16751117)
chr3 (151-277)||(14681913-14682039)
chr3 (151-287)||(8489828-8489964)
chr3 (165-287)||(12339044-12339165)
chr3 (151-287)||(37440281-37440408)
chr3 (151-287)||(15964282-15964409)
chr3 (151-287)||(15968206-15968333)
chr3 (151-287)||(15972130-15972257)
chr3 (151-287)||(7109033-7109161)
chr3 (151-287)||(7112968-7113096)
chr3 (151-287)||(11069405-11069533)
chr3 (151-287)||(14498662-14498790)
chr3 (151-287)||(22321001-22321129)
chr3 (151-287)||(22336056-22336184)
chr3 (151-287)||(27410288-27410416)
chr3 (151-287)||(4108043-4108171)
chr3 (151-287)||(4111895-4112023)
chr3 (151-287)||(30065317-30065445)
chr3 (151-287)||(55022202-55022330)
chr3 (151-258)||(5220481-5220579)
chr3 (155-287)||(11166173-11166297)
chr3 (151-287)||(28949059-28949187)
chr3 (215-287)||(15616766-15616839)
chr3 (209-269)||(12852972-12853032)
chr3 (165-215)||(11301027-11301077)
chr3 (165-215)||(11854183-11854233)
chr3 (209-287)||(16795895-16795973)
chr3 (206-280)||(14440975-14441049)
chr3 (151-183)||(4589701-4589733)
chr3 (151-183)||(19774856-19774888)
chr3 (9-52)||(4589752-4589795)
chr3 (9-52)||(17318047-17318090)
chr3 (151-181)||(27410586-27410616)
chr3 (151-181)||(27410766-27410796)
chr3 (214-275)||(10543097-10543158)
chr3 (9-46)||(11301077-11301114)
chr3 (9-46)||(11854146-11854183)
chr3 (9-46)||(12339007-12339044)
chr3 (9-42)||(16751490-16751523)
chr3 (151-183)||(5220372-5220404)
chr3 (151-183)||(5220441-5220473)
chr3 (151-183)||(8489972-8490004)
chr3 (151-183)||(11166348-11166380)
chr3 (151-183)||(16751184-16751216)
chr3 (151-183)||(16751256-16751288)
chr3 (151-183)||(17317956-17317988)
chr3 (10-42)||(19774683-19774715)
chr3 (151-183)||(22320921-22320953)
chr3 (151-183)||(22335976-22336008)
chr3 (151-183)||(27410464-27410496)
chr3 (151-183)||(27410644-27410676)
[»] chr1 (26 HSPs)
chr1 (151-287)||(20229651-20229787)
chr1 (154-287)||(39244563-39244696)
chr1 (154-287)||(39248118-39248251)
chr1 (151-287)||(21406682-21406818)
chr1 (154-287)||(33796848-33796981)
chr1 (151-287)||(41388663-41388795)
chr1 (151-287)||(1925798-1925925)
chr1 (151-287)||(20924812-20924939)
chr1 (185-287)||(41781942-41782044)
chr1 (151-287)||(1010057-1010185)
chr1 (214-287)||(16376102-16376176)
chr1 (209-287)||(48602865-48602943)
chr1 (215-287)||(52638930-52639003)
chr1 (209-287)||(22131524-22131602)
chr1 (206-270)||(23967335-23967399)
chr1 (151-203)||(16376164-16376216)
chr1 (9-42)||(41389208-41389241)
chr1 (151-183)||(1009977-1010009)
chr1 (151-183)||(1925973-1926005)
chr1 (151-183)||(16376224-16376256)
chr1 (151-183)||(20924987-20925019)
chr1 (151-183)||(41388803-41388835)
chr1 (151-183)||(41388862-41388894)
chr1 (151-183)||(41388934-41388966)
chr1 (151-183)||(41388974-41389006)
chr1 (151-183)||(52635048-52635080)
[»] chr7 (42 HSPs)
chr7 (151-287)||(26291698-26291834)
chr7 (151-287)||(2832841-2832977)
chr7 (151-287)||(7519684-7519820)
chr7 (151-287)||(13919139-13919275)
chr7 (151-287)||(15083497-15083633)
chr7 (151-287)||(39721567-39721703)
chr7 (151-287)||(12705303-12705439)
chr7 (151-287)||(1859468-1859604)
chr7 (151-287)||(18424990-18425122)
chr7 (151-287)||(25927887-25928023)
chr7 (151-287)||(2530798-2530934)
chr7 (151-287)||(45170675-45170802)
chr7 (151-287)||(16113575-16113703)
chr7 (151-287)||(16116728-16116856)
chr7 (151-287)||(32443-32571)
chr7 (151-287)||(71411-71539)
chr7 (151-287)||(75520-75648)
chr7 (151-287)||(12718002-12718130)
chr7 (151-287)||(12722913-12723041)
chr7 (151-287)||(16907855-16907983)
chr7 (151-287)||(18278737-18278865)
chr7 (151-287)||(18282700-18282828)
chr7 (151-275)||(12714298-12714413)
chr7 (151-287)||(20487131-20487258)
chr7 (209-287)||(18301685-18301763)
chr7 (214-277)||(32300747-32300810)
chr7 (213-277)||(14257822-14257886)
chr7 (214-277)||(16585087-16585150)
chr7 (9-42)||(18424807-18424840)
chr7 (9-42)||(26291516-26291549)
chr7 (151-183)||(71587-71619)
chr7 (151-183)||(71667-71699)
chr7 (151-183)||(75696-75728)
chr7 (151-183)||(75776-75808)
chr7 (151-183)||(12705487-12705519)
chr7 (151-183)||(12714178-12714210)
chr7 (151-183)||(16908030-16908062)
chr7 (151-183)||(18278657-18278689)
chr7 (151-183)||(18282620-18282652)
chr7 (151-183)||(18424869-18424901)
chr7 (151-183)||(26291538-26291570)
chr7 (151-183)||(26291578-26291610)
[»] chr8 (21 HSPs)
chr8 (151-287)||(21828683-21828819)
chr8 (151-287)||(21410251-21410387)
chr8 (151-287)||(21804743-21804879)
chr8 (151-279)||(14398498-14398626)
chr8 (151-287)||(18863314-18863450)
chr8 (151-287)||(23913597-23913733)
chr8 (151-287)||(30940746-30940873)
chr8 (151-279)||(21386659-21386787)
chr8 (151-226)||(15923992-15924067)
chr8 (151-287)||(22111265-22111393)
chr8 (151-287)||(43251145-43251273)
chr8 (151-287)||(21977316-21977444)
chr8 (151-287)||(21973225-21973353)
chr8 (206-287)||(44385290-44385372)
chr8 (206-269)||(5760109-5760172)
chr8 (9-42)||(15924176-15924209)
chr8 (151-183)||(14398634-14398666)
chr8 (151-183)||(21386619-21386651)
chr8 (151-183)||(21973401-21973433)
chr8 (151-183)||(21977492-21977524)
chr8 (151-183)||(43251065-43251097)
[»] chr5 (17 HSPs)
chr5 (151-287)||(11224635-11224771)
chr5 (151-287)||(11230447-11230583)
chr5 (151-287)||(11228458-11228594)
chr5 (151-279)||(24767920-24768048)
chr5 (151-287)||(11220049-11220185)
chr5 (154-287)||(18355546-18355679)
chr5 (151-287)||(15237478-15237614)
chr5 (151-287)||(20911545-20911681)
chr5 (151-287)||(40724260-40724387)
chr5 (151-279)||(10752522-10752646)
chr5 (151-287)||(19473329-19473456)
chr5 (209-287)||(22108023-22108101)
chr5 (214-287)||(20295235-20295309)
chr5 (236-287)||(11226553-11226604)
chr5 (9-52)||(40724446-40724489)
chr5 (151-183)||(19473504-19473536)
chr5 (151-183)||(20295155-20295187)
[»] scaffold0074 (1 HSPs)
scaffold0074 (154-280)||(51304-51430)
[»] scaffold0166 (1 HSPs)
scaffold0166 (151-279)||(10417-10545)
[»] chr4 (37 HSPs)
chr4 (151-287)||(20160515-20160651)
chr4 (151-287)||(20163293-20163429)
chr4 (151-287)||(20157839-20157975)
chr4 (151-287)||(15224372-15224504)
chr4 (151-287)||(14954836-14954963)
chr4 (151-287)||(25689237-25689364)
chr4 (151-287)||(5757574-5757702)
chr4 (151-287)||(9555864-9555992)
chr4 (151-287)||(12487019-12487147)
chr4 (151-287)||(14758071-14758199)
chr4 (151-287)||(33741714-33741842)
chr4 (151-287)||(27533345-27533472)
chr4 (151-287)||(4561969-4562097)
chr4 (214-287)||(10712244-10712317)
chr4 (214-287)||(10926014-10926087)
chr4 (151-254)||(17807462-17807556)
chr4 (209-287)||(631397-631475)
chr4 (209-287)||(17048753-17048831)
chr4 (151-203)||(10712204-10712256)
chr4 (151-203)||(10925974-10926026)
chr4 (151-183)||(15224148-15224180)
chr4 (151-183)||(27533265-27533297)
chr4 (9-52)||(27533083-27533126)
chr4 (9-42)||(15224005-15224038)
chr4 (9-42)||(17807320-17807353)
chr4 (151-183)||(9555784-9555816)
chr4 (151-183)||(12486939-12486971)
chr4 (151-183)||(14758246-14758278)
chr4 (151-183)||(14758286-14758318)
chr4 (151-183)||(14955011-14955043)
chr4 (151-183)||(15224108-15224140)
chr4 (151-183)||(15224260-15224292)
chr4 (151-183)||(25689157-25689189)
chr4 (151-183)||(27533185-27533217)
chr4 (151-183)||(27533305-27533337)
chr4 (151-183)||(33741554-33741586)
chr4 (151-183)||(33741634-33741666)
[»] chr2 (19 HSPs)
chr2 (151-287)||(1282714-1282850)
chr2 (151-287)||(31344464-31344600)
chr2 (151-287)||(9784336-9784472)
chr2 (151-287)||(30345660-30345787)
chr2 (151-287)||(41531649-41531776)
chr2 (151-287)||(24629123-24629251)
chr2 (151-287)||(27380076-27380204)
chr2 (151-287)||(27384122-27384250)
chr2 (151-287)||(27601126-27601254)
chr2 (151-287)||(24648689-24648817)
chr2 (215-287)||(10102297-10102370)
chr2 (151-181)||(12902227-12902257)
chr2 (9-42)||(12902306-12902339)
chr2 (151-199)||(357665-357713)
chr2 (251-287)||(12902160-12902196)
chr2 (151-183)||(24629299-24629331)
chr2 (151-183)||(24648609-24648641)
chr2 (151-183)||(27601046-27601078)
chr2 (151-183)||(30345835-30345867)
[»] scaffold0029 (3 HSPs)
scaffold0029 (154-287)||(79870-80004)
scaffold0029 (151-287)||(66168-66295)
scaffold0029 (151-280)||(62259-62379)
[»] scaffold1852 (1 HSPs)
scaffold1852 (151-287)||(160-297)
[»] scaffold0575 (1 HSPs)
scaffold0575 (151-287)||(6535-6671)
[»] scaffold0016 (1 HSPs)
scaffold0016 (154-287)||(208257-208390)
[»] scaffold0200 (1 HSPs)
scaffold0200 (151-287)||(11297-11432)
[»] scaffold0031 (1 HSPs)
scaffold0031 (151-287)||(36755-36891)
[»] scaffold0486 (1 HSPs)
scaffold0486 (151-275)||(9177-9302)
[»] scaffold0293 (1 HSPs)
scaffold0293 (151-287)||(20850-20988)
[»] scaffold0013 (1 HSPs)
scaffold0013 (194-287)||(73963-74056)
[»] scaffold0012 (1 HSPs)
scaffold0012 (197-287)||(190046-190136)
[»] scaffold0349 (1 HSPs)
scaffold0349 (151-287)||(11756-11884)
[»] scaffold0157 (2 HSPs)
scaffold0157 (151-287)||(33330-33458)
scaffold0157 (151-183)||(33506-33538)
[»] scaffold0061 (1 HSPs)
scaffold0061 (151-287)||(67945-68073)
[»] scaffold0141 (1 HSPs)
scaffold0141 (151-287)||(14756-14883)
[»] scaffold0372 (1 HSPs)
scaffold0372 (151-287)||(5743-5871)
[»] scaffold0028 (2 HSPs)
scaffold0028 (151-287)||(59363-59491)
scaffold0028 (151-183)||(59620-59652)
[»] scaffold0601 (1 HSPs)
scaffold0601 (209-286)||(8134-8211)
[»] scaffold0165 (2 HSPs)
scaffold0165 (209-287)||(3115-3193)
scaffold0165 (209-287)||(7178-7256)
[»] scaffold0484 (1 HSPs)
scaffold0484 (206-287)||(241-322)
[»] scaffold0142 (1 HSPs)
scaffold0142 (209-269)||(8252-8312)
[»] scaffold0124 (1 HSPs)
scaffold0124 (209-287)||(25240-25318)
[»] scaffold0299 (2 HSPs)
scaffold0299 (165-213)||(6371-6419)
scaffold0299 (10-46)||(6335-6371)
[»] scaffold0278 (1 HSPs)
scaffold0278 (209-277)||(7141-7209)
[»] scaffold0525 (3 HSPs)
scaffold0525 (151-181)||(4700-4730)
scaffold0525 (9-42)||(4779-4812)
scaffold0525 (251-287)||(4513-4549)
[»] scaffold0292 (1 HSPs)
scaffold0292 (214-286)||(4329-4401)
[»] scaffold0058 (1 HSPs)
scaffold0058 (151-187)||(1009-1045)


Alignment Details
Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 1643836 - 1643972
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1643836 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 1643935  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1643936 acataggtggaagacaactcgacaactcatagatgat 1643972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 31478764 - 31478628
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31478764 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtatgtacttctttaacaac 31478665  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  31478664 acataggtagaagacaactcgacaactcatagatgat 31478628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 23414231 - 23414367
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23414231 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 23414330  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  23414331 acatgggtagaagacaactcgacaactcatagatgat 23414367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 22074766 - 22074630
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22074766 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 22074667  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||| ||||||||||||||| ||||||    
T  22074666 acatgggtagaagataactcgacaactcatagatgat 22074630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 16623683 - 16623816
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16623683 taatcaacatgttaaacaacatagcaacatcttagtcagcatcatataattcacatcataaacatcgtataattttcgtaggtacttttttaacaacaca 16623782  T
Q  254 taggtggaagacaactcgacaactcattgatgat 287  Q
    ||||| |||||||||||||| |||||| ||||||    
T  16623783 taggtagaagacaactcgacgactcatagatgat 16623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 2076798 - 2076934
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  2076798 tcataatcaatatcatagacaacatagcaacatcttagtcaacatcataaaattcacatcataaacatcatgcaatcttcataggtacttctttaacaac 2076897  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||| ||||||||| ||||||    
T  2076898 acatgggtagaagacaactcaacaactcatagatgat 2076934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 14471548 - 14471675
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  14471548 tcataatcaatatgttaaacaacatagcatcatcttagtcaatatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 14471638  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||| |||||||||| |||||| ||||||    
T  14471639 acatgggtagaacacaactcgacgactcatggatgat 14471675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 22948451 - 22948578
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||| ||||         ||||||||||||||||||||||||||||||||    
T  22948451 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataatttacat---------cgtataatcttcgtaggtacttctttaacaac 22948541  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  22948542 acatgggtagaagacaactcgacaactcatagatgat 22948578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 22952407 - 22952534
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||| ||||         ||||||||||||||||||||||||||||||||    
T  22952407 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataatttacat---------cgtataatcttcgtaggtacttctttaacaac 22952497  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  22952498 acatgggtagaagacaactcgacaactcatagatgat 22952534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 23870895 - 23871022
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||| ||||         ||||||||||||||||||||||||||||||||    
T  23870895 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataatttacat---------cgtataatcttcgtaggtacttctttaacaac 23870985  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  23870986 acatgggtagaagacaactcgacaactcatagatgat 23871022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 23874851 - 23874978
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||| ||||         ||||||||||||||||||||||||||||||||    
T  23874851 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataatttacat---------cgtataatcttcgtaggtacttctttaacaac 23874941  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  23874942 acatgggtagaagacaactcgacaactcatagatgat 23874978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 18918147 - 18918035
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  18918147 tcataatcaacatgttaaacaacatagcaacatcttagtcaacatcatataattca---------catcgtataatcttcgtaggtacttctttaacaac 18918057  T
Q  251 acataggtggaagacaactcga 272  Q
    |||| ||| ||| |||||||||    
T  18918056 acatgggtagaacacaactcga 18918035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11566196 - 11566324
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  11566196 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 11566286  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  11566287 acatgggtagaacacaactcgacaaactcatggatgat 11566324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 12619614 - 12619486
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  12619614 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 12619524  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  12619523 acatgggtagaacacaactcgacaaactcatggatgat 12619486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 22862280 - 22862408
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  22862280 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 22862370  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  22862371 acatgggtagaacacaactcgacaaactcatggatgat 22862408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 23394402 - 23394530
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  23394402 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 23394492  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  23394493 acatgggtagaacacaactcgacaaactcatggatgat 23394530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 153 - 287
Target Start/End: Original strand, 16759573 - 16759699
Alignment:
Q  153 ataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacac 252  Q
    |||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  16759573 ataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaacac 16759663  T
Q  253 ataggtggaagacaactcgac-aactcattgatgat 287  Q
    || ||| ||| |||||||||| ||||||| ||||||    
T  16759664 atgggtagaacacaactcgacaaactcatggatgat 16759699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 8243167 - 8243295
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||| ||||         ||||||||||||||||||||||||||    
T  8243167 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatcgtaaa---------atcttcgtaggtacttctttaacaac 8243257  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  8243258 acatgggtagaacacaactcgacaaactcatggatgat 8243295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 23989254 - 23989382
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||| ||||||||||||||||||    
T  23989254 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgcaggtacttctttaacaac 23989344  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  23989345 acatgggtagaacacaactcgacaaactcatggatgat 23989382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 19869923 - 19870017
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  19869923 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattc---------acatcgtataatcttcgtaggtacttctttaacaac 19870013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 27556018 - 27556138
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||                ||||||||||||||||| |||||||||||||||||||    
T  27556018 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatca----------------aacatcgtataatcttcataggtacttctttaacaac 27556101  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||| ||||||||||||||||| ||||||    
T  27556102 acatgggtagaaaacaactcgacaactcatagatgat 27556138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 19656891 - 19656817
Alignment:
Q  206 acatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcat 280  Q
    ||||||||||||||||||||||||| || | ||||| |||||||||||||| | ||||||||||| |||||||||    
T  19656891 acatcataaacatcgtataatcttcataagcacttcattaacaacacatagatagaagacaactcaacaactcat 19656817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 1643756 - 1643788
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  1643756 tcataatcaatatgttaaacaacatagcaacat 1643788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 14471508 - 14471540
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  14471508 tcataatcaatatgttaaacaacatagcaacat 14471540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 18952979 - 18952947
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  18952979 tcataatcaatatgttaaacaacatagcaacat 18952947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 18953019 - 18952987
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  18953019 tcataatcaatatgttaaacaacatagcaacat 18952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1643694 - 1643737
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  1643694 acatcataacaacttaacaatatcataatcaatatcttacacaa 1643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 14471446 - 14471489
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  14471446 acatcataacaacttaacaatatcataatcaatatcttacacaa 14471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 18918329 - 18918286
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  18918329 acatcataacaacttaacaatatcataatcaatatcttacacaa 18918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 19774204 - 19774141
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaact 277  Q
    |||||| |||||||||| || | ||||| |||||||||||| ||| ||||||||||| ||||||    
T  19774204 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaact 19774141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 17742687 - 17742813
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataa--acatcgtataatcttcgtaggtacttctttaaca 248  Q
    |||||||||||||  ||||||||||| ||||||| || ||| |||  |||||   |||||||||  ||||| |||||||||| || | ||||| ||||||    
T  17742687 tcataatcaatatcataaacaacataacaacatcataatcaacat--tataaacaacatcataataacatcatataatcttcataagcacttcattaaca 17742784  T
Q  249 acacataggtggaagacaactcgacaact 277  Q
    |||| | | | ||||||||||| ||||||    
T  17742785 acacgtggatagaagacaactcaacaact 17742813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Original strand, 23401150 - 23401180
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaac 181  Q
    |||||||||||||||||||||||||||||||    
T  23401150 tcataatcaatatgttaaacaacatagcaac 23401180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 31478948 - 31478919
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaa 180  Q
    ||||||||||||||||||||||||||||||    
T  31478948 tcataatcaatatgttaaacaacatagcaa 31478919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 8243088 - 8243120
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  8243088 tcataatcaacatgttaaacaacatagcaacat 8243120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 11566116 - 11566148
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  11566116 tcataatcaacatgttaaacaacatagcaacat 11566148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 12619694 - 12619662
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  12619694 tcataatcaacatgttaaacaacatagcaacat 12619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 16623379 - 16623411
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  16623379 tcataatcaacatgttaaacaacatagcaacat 16623411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 16623499 - 16623531
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  16623499 tcataatcaacatgttaaacaacatagcaacat 16623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 16759491 - 16759523
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  16759491 tcataatcaacatgttaaacaacatagcaacat 16759523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 18918227 - 18918195
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||| ||||||||||||||||||||||||||||    
T  18918227 tcatgatcaatatgttaaacaacatagcaacat 18918195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 19869883 - 19869915
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  19869883 tcataatcaacatgttaaacaacatagcaacat 19869915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 22805370 - 22805426
Alignment:
Q  221 tataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaact 277  Q
    |||||||||| || | ||||| |||||||||||| ||| ||||||||||| ||||||    
T  22805370 tataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaact 22805426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 22862200 - 22862232
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  22862200 tcataatcaacatgttaaacaacatagcaacat 22862232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 23394322 - 23394354
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  23394322 tcataatcaacatgttaaacaacatagcaacat 23394354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 23989214 - 23989246
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  23989214 tcataatcaacatgttaaacaacatagcaacat 23989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 27555978 - 27556010
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  27555978 tcataatcaatatcttaaacaacatagcaacat 27556010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 31478804 - 31478772
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  31478804 tcataatcaatatcttaaacaacatagcaacat 31478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 31478876 - 31478844
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  31478876 tcataatcaacatgttaaacaacatagcaacat 31478844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 31479028 - 31478996
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  31479028 tcataatcaagatgttaaacaacatagcaacat 31478996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 36769 - 36633
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36769 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 36670  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  36669 acataggtagaagacaactcgacaactcatagatgat 36633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 36849 - 36817
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  36849 tcataatcaatatgttaaacaacatagcaacat 36817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 36911 - 36868
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  36911 acatcataacaacttaacaatatcataatcaatatcttacacaa 36868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 9e-67; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 19774896 - 19775032
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19774896 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 19774995  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  19774996 acataggtagaagacaactcgacaactcatagatgat 19775032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 14664979 - 14665115
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14664979 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 14665078  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  14665079 acatgggtagaagacaactcgacaactcatagatgat 14665115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 4589693 - 4589557
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4589693 tcataatcattatcttaaacaacatagcaacatcttagtgaacatcatataattcacatcataaacatcgtataaccttcgtaggtacttctttaacaac 4589594  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  4589593 acataggtagaagacaactcgacaactcatagatgat 4589557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 14668135 - 14668271
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14668135 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 14668234  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||| ||||||||||||||| ||||||    
T  14668235 acatgggtagaagataactcgacaactcatagatgat 14668271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 17317908 - 17317772
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  17317908 tcataaccaatatgttaaacaacatagcaacatctttgtcaacatcatataattcacatcataaacatcgtataatattcgttggtacttctttaacaac 17317809  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    | |||||| ||||||||||||||||||||| ||||||    
T  17317808 atataggtagaagacaactcgacaactcatagatgat 17317772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 15464428 - 15464564
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15464428 tcataatcaatatcttaaacaacatagcaatattttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 15464527  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||| | ||||||    
T  15464528 acatgggtagaagacaactcgacaactcgtagatgat 15464564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 14670391 - 14670519
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  14670391 tcataatcaatatcataaacaacatagcaacatcttagtcaacatcatataattcatatcataaacatcatataatcttcataggtacttctttaacaac 14670490  T
Q  251 acataggtggaagacaactcgacaactca 279  Q
    |||| ||| ||||||||||| ||||||||    
T  14670491 acatgggttgaagacaactcaacaactca 14670519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 16751117 - 16750985
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||||||||||||||||||||||  || |    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16751117 tcataatcaatatgttaaacaacatagcaacataataat----atcatataattcacatcatgaacatcgtataatcttcgtaggtacttctttaacaac 16751022  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||  ||||||||| ||||||    
T  16751021 acataggtagaagacaacttaacaactcatagatgat 16750985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 14681913 - 14682039
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  14681913 tcataatcaatatcatagacaacatagcaacatcttagtcaacatcatataattcatatcataaacatcatataatcttcataggtacttctttaacaac 14682012  T
Q  251 acataggtggaagacaactcgacaact 277  Q
    |||| ||| ||||||||||| ||||||    
T  14682013 acatgggtagaagacaactcaacaact 14682039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 8489964 - 8489828
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||||   |||||  || |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8489964 tcataatcaatatcttaaacaacatcataacattataatcagtatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 8489865  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  8489864 acatgggtagaagacaactcgacaactcatagatgat 8489828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 12339044 - 12339165
Alignment:
Q  165 ttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaaga 264  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||    
T  12339044 ttaaacaacatagaaacatcttagtcaacattatataattcacatcataaacatcgtaaaatcttcataggtacttctttaacaacacat-ggtagaaga 12339142  T
Q  265 caactcgacaactcattgatgat 287  Q
    |||||| ||||||||| ||||||    
T  12339143 caactcaacaactcatagatgat 12339165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 37440408 - 37440281
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||| |||||||||||||||||||    
T  37440408 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatc---------gtataatcttcataggtacttctttaacaac 37440318  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  37440317 acatgggtagaagacaactcgacaactcatagatgat 37440281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 15964282 - 15964409
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  15964282 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 15964372  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  15964373 acatgggtagaagacaactcgacaactcatagatgat 15964409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 15968206 - 15968333
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  15968206 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 15968296  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  15968297 acatgggtagaagacaactcgacaactcatagatgat 15968333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 15972130 - 15972257
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  15972130 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 15972220  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  15972221 acatgggtagaagacaactcgacaactcatagatgat 15972257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 7109033 - 7109161
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  7109033 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 7109123  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||| ||| |||||||||| ||||||| ||||||    
T  7109124 acataggtagaacacaactcgacaaactcatggatgat 7109161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 7112968 - 7113096
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  7112968 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 7113058  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||| ||| |||||||||| ||||||| ||||||    
T  7113059 acataggtagaacacaactcgacaaactcatggatgat 7113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11069405 - 11069533
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  11069405 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 11069495  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  11069496 acatgggtagaacacaactcgacaaactcatggatgat 11069533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 14498662 - 14498790
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  14498662 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 14498752  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  14498753 acatgggtagaacacaactcgacaaactcatggatgat 14498790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 22321001 - 22321129
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  22321001 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 22321091  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  22321092 acatgggtagaacacaactcgacaaactcatggatgat 22321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 22336056 - 22336184
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  22336056 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 22336146  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  22336147 acatgggtagaacacaactcgacaaactcatggatgat 22336184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 27410416 - 27410288
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  27410416 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 27410326  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  27410325 acatgggtagaacacaactcgacaaactcatggatgat 27410288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 4108171 - 4108043
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||| ||| ||||||||| |||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  4108171 tcataatcattatcttaaacaacgtagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 4108081  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| |||||||||||||| ||||||| ||||||    
T  4108080 acatgggtagaagacaactcgacaaactcatggatgat 4108043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 4112023 - 4111895
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||| ||| ||||||||| |||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  4112023 tcataatcattatcttaaacaacgtagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 4111933  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| |||||||||||||| ||||||| ||||||    
T  4111932 acatgggtagaagacaactcgacaaactcatggatgat 4111895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 30065317 - 30065445
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  30065317 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 30065407  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| || ||||||| ||||||| ||||||    
T  30065408 acatgggtagaacaccactcgacaaactcatggatgat 30065445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 55022202 - 55022330
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         ||| |||||||||||||||||||||||||||    
T  55022202 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtacaatcttcgtaggtacttctttaacaac 55022292  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  55022293 acatgggtagaatacaactcgacaaactcatggatgat 55022330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 5220481 - 5220579
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||         |||||||||| |||||||||||||||||||    
T  5220481 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatca---------tataatcttcataggtacttctttaacaac 5220571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 287
Target Start/End: Complemental strand, 11166297 - 11166173
Alignment:
Q  155 aatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacacat 254  Q
    |||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||| ||||||||||||||||||||||||    
T  11166297 aatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatctttgtaggtacttctttaacaacacat 11166207  T
Q  255 aggtggaagacaactcgac-aactcattgatgat 287  Q
     ||| ||| |||||||||| ||||||| ||||||    
T  11166206 gggtagaacacaactcgacaaactcatggatgat 11166173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 28949059 - 28949187
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| || |||||||||||||||| || || |||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  28949059 tcataatcaacatcttaaacaacatagcaaaattttggtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 28949149  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  28949150 acatgggtagaacacaactcgacaaactcatggatgat 28949187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 15616766 - 15616839
Alignment:
Q  215 acatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||| ||||||| ||||||    
T  15616766 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacataactcgacaaactcatggatgat 15616839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 12853032 - 12852972
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaact 269  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  12853032 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaact 12852972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 11301077 - 11301027
Alignment:
Q  165 ttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaa 215  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  11301077 ttaaacagcatagcaacatcttagtcaacatcatataattcacatcataaa 11301027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 11854183 - 11854233
Alignment:
Q  165 ttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaa 215  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11854183 ttaaacaacatagcaacatcttagtcaacatcatataattctcatcataaa 11854233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 16795895 - 16795973
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||  || ||| |||||||  |||||||| ||||||    
T  16795895 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgagtagaatacaactcagcaactcatagatgat 16795973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 14440975 - 14441049
Alignment:
Q  206 acatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcat 280  Q
    ||||||||||||||||||||||||| || | ||||  |||||||||||| | | ||||||||||| |||||||||    
T  14440975 acatcataaacatcgtataatcttcataagcactttattaacaacacatggatagaagacaactcaacaactcat 14441049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 4589733 - 4589701
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  4589733 tcataatcaatatgttaaacaacatagcaacat 4589701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 19774856 - 19774888
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  19774856 tcataatcaatatgttaaacaacatagcaacat 19774888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 4589795 - 4589752
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  4589795 acatcataacaacttaacaatatcataatcaatatcttacacaa 4589752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 17318090 - 17318047
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  17318090 acatcataacaacttaacaatatcataatcaatatctttcacaa 17318047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 27410616 - 27410586
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaac 181  Q
    |||||||||||||||||||||||||||||||    
T  27410616 tcataatcaatatgttaaacaacatagcaac 27410586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 27410796 - 27410766
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaac 181  Q
    |||||||||||||||||||||||||||||||    
T  27410796 tcataatcaatatgttaaacaacatagcaac 27410766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 10543158 - 10543097
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaa 275  Q
    |||||| |||||||||| || | ||||| |||||||||||| ||| ||||||||||| ||||    
T  10543158 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaa 10543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 11301114 - 11301077
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaatacctt 46  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  11301114 acatcataacaacataacaatatcataatcaatacctt 11301077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 11854146 - 11854183
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaatacctt 46  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  11854146 acatcataacaacataacaatatcataatcaatacctt 11854183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 12339007 - 12339044
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaatacctt 46  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  12339007 acatcataacaacataacaatatcataatcaatacctt 12339044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 16751523 - 16751490
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  16751523 acatcataacaacttaacaatatcataatcaata 16751490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 5220372 - 5220404
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  5220372 tcataatcaatattttaaacaacatagcaacat 5220404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 5220441 - 5220473
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  5220441 tcataatcaatattttaaacaacatagcaacat 5220473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 8490004 - 8489972
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  8490004 tcataatcaatatcttaaacaacatagcaacat 8489972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 11166380 - 11166348
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  11166380 tcataatcaacatgttaaacaacatagcaacat 11166348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 16751216 - 16751184
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  16751216 tcataatcaatatcttaaacaacatagcaacat 16751184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 16751288 - 16751256
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  16751288 tcataatcaacatgttaaacaacatagcaacat 16751256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 17317988 - 17317956
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||| ||||    
T  17317988 tcataatcaatatgttaaacaacatagctacat 17317956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 19774683 - 19774715
Alignment:
Q  10 catcatcacaacttaacaatatcataatcaata 42  Q
    |||||| ||||||||||||||||||||||||||    
T  19774683 catcataacaacttaacaatatcataatcaata 19774715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 22320921 - 22320953
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  22320921 tcataatcaacatgttaaacaacatagcaacat 22320953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 22335976 - 22336008
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  22335976 tcataatcaacatgttaaacaacatagcaacat 22336008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 27410496 - 27410464
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  27410496 tcataatcaacatgttaaacaacatagcaacat 27410464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 27410676 - 27410644
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  27410676 tcataatcaacatgttaaacaacatagcaacat 27410644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20229787 - 20229651
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20229787 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 20229688  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  20229687 acataggcggaagacaactcgacaactcatagatgat 20229651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 39244696 - 39244563
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39244696 taatcaacatgttaaacaacatagcaacatcttagtcagcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 39244597  T
Q  254 taggtggaagacaactcgacaactcattgatgat 287  Q
    ||||| |||||||||||||| |||||| ||||||    
T  39244596 taggtagaagacaactcgacgactcatagatgat 39244563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 39248251 - 39248118
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39248251 taatcaacatgttaaacaacatagcaacatcttagtcagcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 39248152  T
Q  254 taggtggaagacaactcgacaactcattgatgat 287  Q
    ||||| |||||||||||||| |||||| ||||||    
T  39248151 taggtagaagacaactcgacgactcatagatgat 39248118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 21406682 - 21406818
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21406682 tcataatcaacatgttaaacaacatagcaacctcttagtcaacatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 21406781  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||| ||||| ||||||    
T  21406782 acataggtagaagacaactcgacagctcatagatgat 21406818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 33796848 - 33796981
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    |||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  33796848 taatcaatatcttaaacaacatagcaacatcttagtcaactttatataattcacatcataaatatcgtataatcttcataggtacttctttaataacaca 33796947  T
Q  254 taggtggaagacaactcgacaactcattgatgat 287  Q
    | ||||||||||||||||||||||||| ||||||    
T  33796948 tgggtggaagacaactcgacaactcatagatgat 33796981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 41388795 - 41388663
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||||||||||||||||||||||  || |    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  41388795 tcataatcaatatgttaaacaacatagcaacataataat----atcatataattcacaccatgaacatcgtataatcttcgtaggtacttctttaacaac 41388700  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  41388699 acataggtagaagacaactcgacaactcatagatgat 41388663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 1925925 - 1925798
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  1925925 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 1925835  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  1925834 acatgggtagaagacaactcgacaactcatagatgat 1925798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20924939 - 20924812
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  20924939 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 20924849  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  20924848 acatgggtagaagacaactcgacaactcatagatgat 20924812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 41782044 - 41781942
Alignment:
Q  185 ttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgat 284  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||    
T  41782044 ttagtcaacatcatataattcacatcataaacatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagat 41781945  T
Q  285 gat 287  Q
    |||    
T  41781944 gat 41781942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 1010057 - 1010185
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  1010057 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 1010147  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  1010148 acatgggtagaacacaactcgacaaactcatggatgat 1010185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 16376176 - 16376102
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgac-aactcattgatgat 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||| ||||||    
T  16376176 aacatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgat 16376102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 48602865 - 48602943
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||  |||||||| ||||||    
T  48602865 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcagcaactcatagatgat 48602943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 52638930 - 52639003
Alignment:
Q  215 acatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||| ||||||    
T  52638930 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgat 52639003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 22131602 - 22131524
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| || |||| ||| ||||||||| ||||||    
T  22131602 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagatgacagctcaacaactcatagatgat 22131524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 23967335 - 23967399
Alignment:
Q  206 acatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactc 270  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||| || |||||||||||    
T  23967335 acatcataaacatcgtataatcttcataagtacttcattaacaacacatatgtagaagacaactc 23967399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 16376216 - 16376164
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataat 203  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||| ||||||    
T  16376216 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcgtataat 16376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 41389241 - 41389208
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  41389241 acatcataacaacttaacaatatcataatcaata 41389208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 1009977 - 1010009
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  1009977 tcataatcaacatgttaaacaacatagcaacat 1010009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 1926005 - 1925973
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  1926005 tcataatcaacatgttaaacaacatagcaacat 1925973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 16376256 - 16376224
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  16376256 tcataatcaacatgttaaacaacatagcaacat 16376224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 20925019 - 20924987
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  20925019 tcataatcaacatgttaaacaacatagcaacat 20924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 41388835 - 41388803
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  41388835 tcataatcaacatgttaaacaacatagcaacat 41388803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 41388894 - 41388862
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  41388894 tcataatcaatatcttaaacaacatagcaacat 41388862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 41388966 - 41388934
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  41388966 tcataatcaacatgttaaacaacatagcaacat 41388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 41389006 - 41388974
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  41389006 tcataatcaacatgttaaacaacatagcaacat 41388974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 52635048 - 52635080
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  52635048 tcataatcaacatgttaaacaacatagcaacat 52635080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 5e-62; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 26291698 - 26291834
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26291698 tcataatcaacaccttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 26291797  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||||||||||||||||||||||||| ||||||    
T  26291798 acataggtggaagacaactcgacaactcatagatgat 26291834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 2832977 - 2832841
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2832977 tcataatcaatattttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 2832878  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  2832877 acataggtagaagacaactcgacaactcatagatgat 2832841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 7519820 - 7519684
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7519820 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 7519721  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  7519720 acatgggtagaagacaactcgacaactcatagatgat 7519684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 13919275 - 13919139
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13919275 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 13919176  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  13919175 acatgggtagaagacaactcgacaactcatagatgat 13919139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 15083497 - 15083633
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15083497 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 15083596  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  15083597 acatgggtagaagacaactcgacaactcatagatgat 15083633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 39721567 - 39721703
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39721567 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 39721666  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  39721667 acatgggtagaagacaactcgacaactcatggatgat 39721703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 12705439 - 12705303
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12705439 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 12705340  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  12705339 acatgggtagaagacaactcgacaactcatagatgat 12705303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 1859604 - 1859468
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  1859604 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataaccttcataggtacttctttaacaac 1859505  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||| ||||||||||||||| | ||||||    
T  1859504 acatgggtagaaaacaactcgacaactcgtagatgat 1859468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 18424990 - 18425122
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||||||||||||||||||||||  || |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18424990 tcataatcaatatgttaaacaacatagcaacataataat----atcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 18425085  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  18425086 acataggtagaagacaactcgacaactcatagatgat 18425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 25928023 - 25927887
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  25928023 tcataatcaatatcatagacaacatagcaacatcttagtcaacatcatataattcacgtcataaacatcatataatcttcataggtacttctttaacaac 25927924  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||| ||||||||| ||||||    
T  25927923 acatgggtagaagacaactcaacaactcatagatgat 25927887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 2530934 - 2530798
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||||||||||||| || |||  ||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  2530934 tcataatcaatatcttaaacaacatagcaacatcataatcaatatcttataattcacatcataaacatcgtataatcttcatgggtacttctttaacaac 2530835  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||| | ||||||    
T  2530834 acatgggtagaagacaactcgacaactcttagatgat 2530798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 45170802 - 45170675
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  45170802 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 45170712  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||| ||||||||||||||||| ||||||    
T  45170711 acatgggtagaaaacaactcgacaactcatagatgat 45170675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 16113575 - 16113703
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  16113575 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 16113665  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||| ||| |||||||||| ||||||| ||||||    
T  16113666 acataggtagaacacaactcgacaaactcatggatgat 16113703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 16116728 - 16116856
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  16116728 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 16116818  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||| ||| |||||||||| ||||||| ||||||    
T  16116819 acataggtagaacacaactcgacaaactcatggatgat 16116856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 32443 - 32571
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  32443 tcataatcaatattttaaacaacgtagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 32533  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||||||| ||| |||||||||| ||||||| ||||||    
T  32534 acataggtagaacacaactcgacaaactcatggatgat 32571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 71539 - 71411
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  71539 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 71449  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  71448 acatgggtagaacacaactcgacaaactcatggatgat 71411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 75648 - 75520
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  75648 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 75558  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  75557 acatgggtagaacacaactcgacaaactcatggatgat 75520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 12718002 - 12718130
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||     
T  12718002 tcataatcaacatgttaaacaacatagcaacattttagtcaacatcatataattc---------acatcgtataatcttcgtaggtacttctttaacaat 12718092  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  12718093 acatgggtagaacacaactcgacaaactcatggatgat 12718130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 12722913 - 12723041
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||     
T  12722913 tcataatcaacatgttaaacaacatagcaacattttagtcaacatcatataattc---------acatcgtataatcttcgtaggtacttctttaacaat 12723003  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  12723004 acatgggtagaacacaactcgacaaactcatggatgat 12723041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 16907983 - 16907855
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  16907983 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 16907893  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  16907892 acatgggtagaacacaactcgacaaactcatggatgat 16907855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 18278737 - 18278865
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  18278737 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 18278827  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  18278828 acatgggtagaacacaactcgacaaactcatggatgat 18278865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 18282700 - 18282828
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  18282700 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 18282790  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  18282791 acatgggtagaacacaactcgacaaactcatggatgat 18282828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 12714298 - 12714413
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  12714298 tcataatcaatatcttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 12714388  T
Q  251 acataggtggaagacaactcgacaa 275  Q
    |||| ||| ||| ||||||||||||    
T  12714389 acatgggtagaacacaactcgacaa 12714413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 20487131 - 20487258
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || | ||||||||||||||||||||| |||||||||||||||||||||         |||||||| |||||||||||||||||||    
T  20487131 tcataatcaatatcatagataacatagcaacatcttagtcaacatcatataattcacatcata---------taatcttcataggtacttctttaacaac 20487221  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||| ||||||||| ||||||    
T  20487222 acatgggtagaagacaactcaacaactcatagatgat 20487258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 18301685 - 18301763
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||| ||| ||| |||||||  |||||||| ||||||    
T  18301685 tcatgaacatcgtgtaatcttcataggtacttctttaacaacacatgggtagaatacaactcagcaactcatagatgat 18301763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 32300747 - 32300810
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaact 277  Q
    ||||||||||||||||| || | ||||| |||||||||||| ||| ||||||||||| ||||||    
T  32300747 aacatcgtataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaact 32300810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 14257822 - 14257886
Alignment:
Q  213 aaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaact 277  Q
    ||||||| |||||||||| || | ||||| |||||||||||| ||| ||||||||||| ||||||    
T  14257822 aaacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaact 14257886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 16585087 - 16585150
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaact 277  Q
    |||||| |||||||||| || | ||||| |||||||||||| ||| ||||||||||| ||||||    
T  16585087 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaact 16585150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 18424807 - 18424840
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  18424807 acatcataacaacttaacaatatcataatcaata 18424840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 26291516 - 26291549
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  26291516 acatcataacaacttaacaatatcataatcaata 26291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 71619 - 71587
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  71619 tcataatcaacatgttaaacaacatagcaacat 71587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 71699 - 71667
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  71699 tcataatcaacatgttaaacaacatagcaacat 71667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 75728 - 75696
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  75728 tcataatcaacatgttaaacaacatagcaacat 75696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 75808 - 75776
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  75808 tcataatcaacatgttaaacaacatagcaacat 75776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 12705519 - 12705487
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  12705519 tcataatcaacatgttaaacaacatagcaacat 12705487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 12714178 - 12714210
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  12714178 tcataatcaacatgttaaacaacatagcaacat 12714210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 16908062 - 16908030
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  16908062 tcataatcaacatgttaaacaacatagcaacat 16908030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 18278657 - 18278689
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  18278657 tcataatcaacatgttaaacaacatagcaacat 18278689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 18282620 - 18282652
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  18282620 tcataatcaacatgttaaacaacatagcaacat 18282652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 18424869 - 18424901
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||||||||| |||||||||||||    
T  18424869 tcataatcaatatgttaaataacatagcaacat 18424901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 26291538 - 26291570
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  26291538 tcataatcaatatcttaaacaacatagcaacat 26291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 26291578 - 26291610
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  26291578 tcataatcaatatcttaaacaacatagcaacat 26291610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 21828819 - 21828683
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21828819 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 21828720  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  21828719 acatgggtagaagacaactcgacaactcatagatgat 21828683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 21410251 - 21410387
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  21410251 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcatataatcgtcataggtacttctttaacaac 21410350  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  21410351 acatgggtagaagacaactcgacaactcatagatgat 21410387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 21804743 - 21804879
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  21804743 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcatataatcgtcataggtacttctttaacaac 21804842  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  21804843 acatgggtagaagacaactcgacaactcatagatgat 21804879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 14398626 - 14398498
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  14398626 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcatatgtacttctttaacaac 14398527  T
Q  251 acataggtggaagacaactcgacaactca 279  Q
    |||| ||| ||| ||||||||||||||||    
T  14398526 acatgggtagaaaacaactcgacaactca 14398498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 18863450 - 18863314
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  18863450 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatcgtaaacatcgtataatcttcataggtacttctttaacaac 18863351  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  18863350 acatgggtagaagacaactcgacaactcatagatgat 18863314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 23913597 - 23913733
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  23913597 tcataatcaatatcatagacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcatgtaatcttcataggtacttctttaacaac 23913696  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||| |  ||||||||| ||||||    
T  23913697 acatgggtagaagacaaattaacaactcatagatgat 23913733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 30940873 - 30940746
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  30940873 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 30940783  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  30940782 acatgggtagaagacaactcgacaactcatagatgat 30940746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 21386659 - 21386787
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||||   |||||  || |||  ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  21386659 tcataatcaatatcttaaacaacatcataacattataatcagtatcatataattcacatcataaacatcgtataatctttataagtacttctttaacaac 21386758  T
Q  251 acataggtggaagacaactcgacaactca 279  Q
    |||| ||| ||||||||||||||||||||    
T  21386759 acatgggtagaagacaactcgacaactca 21386787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 15924067 - 15923992
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataat 226  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  15924067 tcataatcaatatgttaaacaacatagcaacatcttggtcaacatcatataattcacatcataaacatcatataat 15923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 22111265 - 22111393
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  22111265 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 22111355  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| | |||||||| ||||||| ||||||    
T  22111356 acatgggtagaacataactcgacaaactcatggatgat 22111393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 43251145 - 43251273
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         ||| |||||||||||||||||||||||||||    
T  43251145 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtacaatcttcgtaggtacttctttaacaac 43251235  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  43251236 acatgggtagaacacaactcgacaaactcatggatgat 43251273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 21977444 - 21977316
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || || |||| ||||||||||||||||||         ||||||||||| |||||||||||| ||||||    
T  21977444 tcataatcaacatgttaaacaacatagcaatattttggtcaacatcatataattcacatc---------gtataatcttcataggtacttcttcaacaac 21977354  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  21977353 acatgggtagaacacaactcgacaaactcatggatgat 21977316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 21973353 - 21973225
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||| ||| ||||||||||||||||||| || || |||| ||||||||||||||||||         ||||||||||| |||||||||||| ||||||    
T  21973353 tcataaacaacatgttaaacaacatagcaatattttggtcaacatcatataattcacatc---------gtataatcttcataggtacttcttcaacaac 21973263  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  21973262 acatgggtagaacacaactcgacaaactcatggatgat 21973225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 44385372 - 44385290
Alignment:
Q  206 acatcataaacatcgtataatcttcgtaggtact-tctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||| ||||||||||||||||| ||||||||  |||||| ||||||| ||| ||||||||||| ||||| ||| ||||||    
T  44385372 acatcatgaacatcgtataatcttcataggtactccctttaataacacatgggtagaagacaactcaacaacacatagatgat 44385290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 5760109 - 5760172
Alignment:
Q  206 acatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaact 269  Q
    ||||||||||||||||||||||||| || | ||||| |||||||||||| | | ||||||||||    
T  5760109 acatcataaacatcgtataatcttcataagcacttcattaacaacacatggatagaagacaact 5760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 15924209 - 15924176
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  15924209 acatcataacaacttaacaatatcataatcaata 15924176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 14398666 - 14398634
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  14398666 tcataatcaatatcttaaacaacatagcaacat 14398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 21386619 - 21386651
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  21386619 tcataatcaatatcttaaacaacatagcaacat 21386651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 21973433 - 21973401
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  21973433 tcataatcaacatgttaaacaacatagcaacat 21973401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 21977524 - 21977492
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  21977524 tcataatcaacatgttaaacaacatagcaacat 21977492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 43251065 - 43251097
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  43251065 tcataatcaacatgttaaacaacatagcaacat 43251097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11224635 - 11224771
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11224635 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 11224734  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  11224735 acatgggtagaagacaactcgacaactcatagatgat 11224771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11230447 - 11230583
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11230447 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 11230546  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  11230547 acatgggtagaagacaactcgacaactcatagatgat 11230583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11228458 - 11228594
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11228458 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcctaggtacttctttaacaac 11228557  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||||||| |||||||| ||||||    
T  11228558 acatgggtagaagacaactcgtcaactcatagatgat 11228594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 24768048 - 24767920
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24768048 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 24767949  T
Q  251 acataggtggaagacaactcgacaactca 279  Q
    |||| ||| ||||||||||||||||||||    
T  24767948 acatgggtagaagacaactcgacaactca 24767920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11220049 - 11220185
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  11220049 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcatagctacttctttaacaac 11220148  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||||||| |||||||| ||||||    
T  11220149 acatgggtagaagacaactcgtcaactcatagatgat 11220185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 18355546 - 18355679
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    |||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  18355546 taatcaatatcttaaacaacatagcaacatcttagtcaactttatataattcacatcataaatatcgtataatcttcataggtacttctttaacaacaca 18355645  T
Q  254 taggtggaagacaactcgacaactcattgatgat 287  Q
    | ||| ||||||||||||||||||||| ||||||    
T  18355646 tgggtagaagacaactcgacaactcatagatgat 18355679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 15237614 - 15237478
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||| ||||||||||||||||||| ||| ||| || |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15237614 tcataaccaatatgttaaacaacataacaatatcataatcaatatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 15237515  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| |||||||||||||| |||||| ||||||    
T  15237514 acataggtagaagacaactcgacgactcatagatgat 15237478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20911681 - 20911545
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  20911681 tcataatcaatatcttaaacaacatagcgatatcttagtcaacattatatatttcacatcataaacatcgtataatcttcataggtacttctttaacaac 20911582  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||||||| ||||| || ||||||    
T  20911581 acatgggtagaagacaactcgtcaactaatagatgat 20911545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 40724387 - 40724260
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  40724387 tcataatcaatatgttaaacaacatagcaacatcttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 40724297  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||| ||||||||||||||||| ||||||    
T  40724296 acatgggtagaacacaactcgacaactcatggatgat 40724260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 10752522 - 10752646
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||||||   | |    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10752522 tcataatcaacatgttaaacaacatagcaacataacaat----atcatataattcacatcataaacatcgtataatcttcgtatgtacttctttaacaac 10752617  T
Q  251 acataggtggaagacaactcgacaactca 279  Q
    | |||||| ||||||||||||||||||||    
T  10752618 atataggtagaagacaactcgacaactca 10752646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 19473456 - 19473329
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  19473456 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 19473366  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  19473365 acatgggtagaagacaactcgacaactcatagatgat 19473329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 22108101 - 22108023
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  22108101 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgat 22108023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 20295235 - 20295309
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgac-aactcattgatgat 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||| ||||||    
T  20295235 aacatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgat 20295309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 11226553 - 11226604
Alignment:
Q  236 tacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  11226553 tacttctttaacaacacatgggtagaagacaactcgacaactcatagatgat 11226604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 40724489 - 40724446
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  40724489 acatcataacaacttaacaatatcataatcaatatcttacacaa 40724446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 19473536 - 19473504
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  19473536 tcataatcaacatgttaaacaacatagcaacat 19473504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 20295155 - 20295187
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  20295155 tcataatcaacatgttaaacaacatagcaacat 20295187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 51430 - 51304
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51430 taatcaacatgttaaacaacatagcaacatcttagtcagcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 51331  T
Q  254 taggtggaagacaactcgacaactcat 280  Q
    ||||| |||||||||||||| ||||||    
T  51330 taggtagaagacaactcgacgactcat 51304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 10545 - 10417
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10545 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 10446  T
Q  251 acataggtggaagacaactcgacaactca 279  Q
    |||| ||| ||||||||||||||||||||    
T  10445 acatgggtagaagacaactcgacaactca 10417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 7e-55; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20160651 - 20160515
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20160651 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 20160552  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||||||||||| |||| ||||||    
T  20160551 acatgggtagaagacaactcgacaattcatagatgat 20160515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20163429 - 20163293
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20163429 tcataatcaatatcttaaacaacatagaaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 20163330  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||| ||||||||||| ||||||    
T  20163329 acataggtagaagacaacccgacaactcatagatgat 20163293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20157975 - 20157839
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  20157975 tcataatcaatatcttaaacaacatagcaacatctcagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttatttaacaac 20157876  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  20157875 acatgggtagaagacaactcgacaactcatagatgat 20157839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 15224372 - 15224504
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||||||   | |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15224372 tcataatcaagatgttaaacaacatagcaacataacaat----atcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 15224467  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  15224468 acataggtagaagacaactcgacaactcatagatgat 15224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 14954963 - 14954836
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  14954963 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 14954873  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||||||||||||| || ||||||    
T  14954872 acatgggtagaagacaactcgacaacttatagatgat 14954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 25689237 - 25689364
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||| ||||         ||||||||||||||||||||||||||||||||    
T  25689237 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataatttacat---------cgtataatcttcgtaggtacttctttaacaac 25689327  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  25689328 acatgggtagaagacaactcgacaactcatagatgat 25689364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 5757702 - 5757574
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  5757702 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 5757612  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  5757611 acatgggtagaacacaactcgacaaactcatggatgat 5757574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 9555864 - 9555992
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  9555864 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 9555954  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  9555955 acatgggtagaacacaactcgacaaactcatggatgat 9555992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 12487019 - 12487147
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  12487019 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 12487109  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  12487110 acatgggtagaacacaactcgacaaactcatggatgat 12487147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 14758199 - 14758071
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  14758199 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 14758109  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  14758108 acatgggtagaacacaactcgacaaactcatggatgat 14758071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 33741714 - 33741842
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  33741714 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 33741804  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  33741805 acatgggtagaacacaactcgacaaactcatggatgat 33741842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 27533345 - 27533472
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||| ||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  27533345 tcatattcattatcttaaacaacatagcaacattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 27533435  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||  |||||||||||||||| ||||||    
T  27533436 acatgggtagaacgcaactcgacaactcatggatgat 27533472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 4562097 - 4561969
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||| ||||||||||||||||||||||    
T  4562097 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcctcgtaggtacttctttaacaac 4562007  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  4562006 acatgggtagaacacaactcgacaaactcatggatgat 4561969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 10712244 - 10712317
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  10712244 aacatcgtataatcttcataggtacttctttaacaacacatgggtaaaagacaactcgacaactcatagatgat 10712317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 10926014 - 10926087
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  10926014 aacatcgtataatcttcataggtacttctttaacaacacatgggtaaaagacaactcgacaactcatagatgat 10926087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 17807462 - 17807556
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||| |||||| || ||||||| |||||||||||||         |||||||| |||||||||||||||||||||||||||    
T  17807462 tcataatcaacatgttaaacaacttagcaatattttagtcaacatcatataattc---------acatcgtaaaatcttcgtaggtacttctttaacaac 17807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 631475 - 631397
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||  |||||||| ||||||    
T  631475 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaatacaactcagcaactcatagatgat 631397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 17048831 - 17048753
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| |||  || |||||||  |||||||| ||||||    
T  17048831 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtataatacaactcagcaactcatagatgat 17048753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 10712204 - 10712256
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataat 203  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10712204 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcgtataat 10712256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 10925974 - 10926026
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataat 203  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10925974 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcgtataat 10926026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 15224148 - 15224180
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  15224148 tcataatcaatatgttaaacaacatagcaacat 15224180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 27533265 - 27533297
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||||||||||||||||||||||||||    
T  27533265 tcataatcaatatgttaaacaacatagcaacat 27533297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 27533083 - 27533126
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaataccttgcacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  27533083 acatcataacaacttaacaatatcataatcaatatcttacacaa 27533126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 15224005 - 15224038
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  15224005 acatcataacaacttaacaatatcataatcaata 15224038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 17807320 - 17807353
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  17807320 acatcataacaacttaacaatatcataatcaata 17807353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 9555784 - 9555816
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  9555784 tcataatcaacatgttaaacaacatagcaacat 9555816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 12486939 - 12486971
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  12486939 tcataatcaacatgttaaacaacatagcaacat 12486971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 14758278 - 14758246
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  14758278 tcataatcaacatgttaaacaacatagcaacat 14758246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 14758318 - 14758286
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    ||||||||||||| |||||||||||||||||||    
T  14758318 tcataatcaatatcttaaacaacatagcaacat 14758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 14955043 - 14955011
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  14955043 tcataatcaacatgttaaacaacatagcaacat 14955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 15224108 - 15224140
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  15224108 tcataatcaacatgttaaacaacatagcaacat 15224140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 15224260 - 15224292
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  15224260 tcataatcaagatgttaaacaacatagcaacat 15224292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 25689157 - 25689189
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  25689157 tcataatcaacatgttaaacaacatagcaacat 25689189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 27533185 - 27533217
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||| ||||||||||||||||||||||||||||    
T  27533185 tcatgatcaatatgttaaacaacatagcaacat 27533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 27533305 - 27533337
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||| ||||||||||||||||||||||||||||    
T  27533305 tcatgatcaatatgttaaacaacatagcaacat 27533337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 33741554 - 33741586
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  33741554 tcataatcaacatgttaaacaacatagcaacat 33741586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 33741634 - 33741666
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  33741634 tcataatcaacatgttaaacaacatagcaacat 33741666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 1282714 - 1282850
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1282714 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaac 1282813  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| |||||||||||||||||| || ||||||    
T  1282814 acatgggtagaagacaactcgacaacttatagatgat 1282850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 31344464 - 31344600
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  31344464 tcataatcaatatcttaaacaacatagcaacatcttagtcaactttatatagttcacatcataaacatcgtataatcttcataggtacttctttaacaac 31344563  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  31344564 acatgggtagaagacaactcgacaactcatagatgat 31344600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 9784336 - 9784472
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  9784336 tcataatcaatatcatagacaacatggcaacatcttggtcaacatcatataattcacatcataaacatcatataaacttcataggtacttctttaacaac 9784435  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||| ||||| ||||||||| ||||||    
T  9784436 acatgggtagaagaaaactcaacaactcatagatgat 9784472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 30345787 - 30345660
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  30345787 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 30345697  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  30345696 acatgggtagaagacaactcgacaactcatagatgat 30345660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 41531776 - 41531649
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||  | ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  41531776 tcataatcaacatgttaaacaacatagcaatcttttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 41531686  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  41531685 acatgggtagaagacaactcgacaactcatagatgat 41531649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 24629251 - 24629123
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  24629251 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 24629161  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  24629160 acatgggtagaacacaactcgacaaactcatggatgat 24629123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 27380204 - 27380076
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  27380204 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 27380114  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  27380113 acatgggtagaacacaactcgacaaactcatggatgat 27380076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 27384250 - 27384122
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  27384250 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 27384160  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  27384159 acatgggtagaacacaactcgacaaactcatggatgat 27384122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 27601126 - 27601254
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  27601126 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 27601216  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  27601217 acatgggtagaacacaactcgacaaactcatggatgat 27601254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 24648689 - 24648817
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||| ||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         ||| |||||||||||||||||||||||||||    
T  24648689 tcataaccaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtacaatcttcgtaggtacttctttaacaac 24648779  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  24648780 acatgggtagaacacaactcgacaaactcatggatgat 24648817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 10102370 - 10102297
Alignment:
Q  215 acatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgac-aactcattgatgat 287  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||||| ||||||| ||||||    
T  10102370 acatcgtataatcttcgtaggtacttctttaacgacacatgggtagaacacaactcgacaaactcatggatgat 10102297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 12902257 - 12902227
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaac 181  Q
    |||||||||||||||||||||||||||||||    
T  12902257 tcataatcaatatgttaaacaacatagcaac 12902227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 12902339 - 12902306
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  12902339 acatcataacaacttaacaatatcataatcaata 12902306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 357665 - 357713
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcata 199  Q
    |||||||||||||  ||||||||||||||||||| || ||| |||||||    
T  357665 tcataatcaatatcataaacaacatagcaacatcgtaatcaacatcata 357713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 12902196 - 12902160
Alignment:
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  12902196 acataggtagaagacaactcgacaactcatagatgat 12902160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 24629331 - 24629299
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  24629331 tcataatcaacatgttaaacaacatagcaacat 24629299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 24648609 - 24648641
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  24648609 tcataatcaacatgttaaacaacatagcaacat 24648641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 27601046 - 27601078
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  27601046 tcataatcaacatgttaaacaacatagcaacat 27601078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 30345867 - 30345835
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  30345867 tcataatcaacatgttaaacaacatagcaacat 30345835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 99; Significance: 7e-49; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 79870 - 80004
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    ||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  79870 taatcaacatgttaaacgacatagcaacatcttagtcaacaccatataattcacatcataaacatcgtataatcttcgtaggtacttctttaataacaca 79969  T
Q  254 taggtggaagacaactcgac-aactcattgatgat 287  Q
    ||||| |||||||||||||| ||||||| ||||||    
T  79970 taggtagaagacaactcgacaaactcatggatgat 80004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 66295 - 66168
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||         ||||||||||||||||||| |||||||||||||||    
T  66295 tcataatcaacatgttaaacaacatagcaacatcttagtcaacatcatataattca---------catcgtataatcttcgtagctacttctttaacaac 66205  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||| |||||||||| |||||| ||||||    
T  66204 acatgggtagaacacaactcgacgactcatggatgat 66168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 280
Target Start/End: Complemental strand, 62379 - 62259
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||         ||||||||||||||||||| |||||||||||||||    
T  62379 tcataatcaacatgttaaacaacatagcaacatcttagtcaacatcatataattca---------catcgtataatcttcgtagctacttctttaacaac 62289  T
Q  251 acataggtggaagacaactcgacaactcat 280  Q
    |||| ||| ||| |||||||||| ||||||    
T  62288 acatgggtagaacacaactcgacgactcat 62259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 297 - 160
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  297 tcataatcaatatcttaaacaacacagcaacatcttagtcaacatcatataattcacatcgtaaacatcgtataatcttcataggtacttctttaacaac 198  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| |||||||||||||| ||||||| ||||||    
T  197 acatgggtagaagacaactcgacaaactcatggatgat 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 6671 - 6535
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  6671 tcataatcaatatcatagacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcatataatcttcataggtacttctttaacaac 6572  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||| ||||||||| ||||||    
T  6571 acatgggtagaagacaactcaacaactcatagatgat 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 208390 - 208257
Alignment:
Q  154 taatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacaca 253  Q
    |||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  208390 taatcaatatcttaaacaacatagcaacatcttagtcaactttatataattcacatcataaatatcgtataatcttcataggtacttctttaacaacaca 208291  T
Q  254 taggtggaagacaactcgacaactcattgatgat 287  Q
    | ||| |||||||| |||||||||||| ||||||    
T  208290 tgggtagaagacaagtcgacaactcatagatgat 208257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11297 - 11432
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    ||||||||||||| ||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  11297 tcataatcaatatcttaaaca-catagcaatatcttagtcaacatcatataattcacatcataaacatcgtataatcttcataggtacttctttaacaag 11395  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||| | ||||||    
T  11396 acatgggtagaagacaactcgacaactcgtagatgat 11432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 36891 - 36755
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||||||  || ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  36891 tcataatcaatatcatagacaacatagcaacatcttagtcaacatcatataattcatatcataaacatcatataatcttcataggtacttctttaacaac 36792  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||| ||||||||| ||||||    
T  36791 acatgggtagaagacaactcaacaactcatagatgat 36755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 9177 - 9302
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataa-tcttcgtaggtacttctttaacaa 249  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  9177 tcataatcaatatcttaaacaacatagcaacatcttagtcaacatcatataattcacatcataaacatcgtataattcttcataggtacttctttaacaa 9276  T
Q  250 cacataggtggaagacaactcgacaa 275  Q
    ||| |||||  |||||| ||||||||    
T  9277 cacttaggtataagacagctcgacaa 9302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 20988 - 20850
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttc--tttaaca 248  Q
    |||||||||||||  || ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||  |||||||    
T  20988 tcataatcaatatcatatacaacatagcaacatcttagtcaacatcatataattcacgtcataaacatcatataatcttcataggtacttctttttaaca 20889  T
Q  249 acacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||| ||| ||||||||||| ||||||||| ||||||    
T  20888 acacatgggtagaagacaactcaacaactcatagatgat 20850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 74056 - 73963
Alignment:
Q  194 atcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  74056 atcatataattcacatcttaaacatcgtataatcttcataggtacttctttaacaacacttaggtagaagacaactcgacaactcttagatgat 73963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 197 - 287
Target Start/End: Complemental strand, 190136 - 190046
Alignment:
Q  197 atataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||    
T  190136 atataattcacatcataaatatcgtataatcttcataggtacttctttaacaacacatgggaagaagacaactcgacaactcatagatgat 190046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 11756 - 11884
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  11756 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacat---------cgtataatcttcgtaggtacttctttaacaac 11846  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  11847 acatgggtagaacacaactcgacaaactcatggatgat 11884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 33458 - 33330
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  33458 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 33368  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  33367 acatgggtagaacacaactcgacaaactcatggatgat 33330  T

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Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 33538 - 33506
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  33538 tcataatcaacatgttaaacaacatagcaacat 33506  T

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Target: scaffold0061 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 68073 - 67945
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  68073 tcataatcaacatgttaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 67983  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  67982 acatgggtagaacacaactcgacaaactcatggatgat 67945  T

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Target: scaffold0141 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 14883 - 14756
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| |  ||||||| |||||||||||||||||| ||||         |||||| |||||||||||||||||||    
T  14883 tcataatcaacatgttaaacaacatagcaataatttagtcaacatcatataattcacatcgtaaa---------atcttcataggtacttctttaacaac 14793  T
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||| ||||||||||||||||||||| ||||||    
T  14792 acatgggtagaagacaactcgacaactcatagatgat 14756  T

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Target: scaffold0372 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 5871 - 5743
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| |||| |||||||||||||| || ||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  5871 tcataatcaacatgtcaaacaacatagcaatattttagtcaacatcatataattcacatc---------gtataatcttcgtaggtacttctttaacaac 5781  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  5780 acatgggtagaacacaactcgacaaactcatggatgat 5743  T

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Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 59491 - 59363
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatcttagtcatcatcatataattcacatcataaacatcgtataatcttcgtaggtacttctttaacaac 250  Q
    |||||||||| ||||||||||||||||||| || || |||| ||||||||||||||||||         |||||||| ||||||||||||||||||||||    
T  59491 tcataatcaacatgttaaacaacatagcaatattttggtcaacatcatataattcacatc---------gtataatcatcgtaggtacttctttaacaac 59401  T
Q  251 acataggtggaagacaactcgac-aactcattgatgat 287  Q
    |||| ||| ||| |||||||||| ||||||| ||||||    
T  59400 acatgggtagaacacaactcgacaaactcatggatgat 59363  T

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Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 59652 - 59620
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacat 183  Q
    |||||||||| ||||||||||||||||||||||    
T  59652 tcataatcaacatgttaaacaacatagcaacat 59620  T

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Target: scaffold0601 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 8211 - 8134
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatga 286  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  8211 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatga 8134  T

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Target: scaffold0165 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 3115 - 3193
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||  |||||||| ||||||    
T  3115 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaatacaactcagcaactcatagatgat 3193  T

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Target: scaffold0165; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 7178 - 7256
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||  |||||||| ||||||    
T  7178 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaatacaactcagcaactcatagatgat 7256  T

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Target: scaffold0484 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 241 - 322
Alignment:
Q  206 acatcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||| | |||||  |||||||| ||||||    
T  241 acatcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaataaaactcagcaactcatagatgat 322  T

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Target: scaffold0142 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 8312 - 8252
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaact 269  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  8312 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaact 8252  T

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Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 25318 - 25240
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatgat 287  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||  |||||| | ||||||    
T  25318 tcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaatacaactcagcaactcgtagatgat 25240  T

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Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 6371 - 6419
Alignment:
Q  165 ttaaacaacatagcaacatcttagtcatcatcatataattcacatcata 213  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6371 ttaaacaacatagcaacatcttagtcagcattatataattcacatcata 6419  T

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Target: scaffold0299; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 6335 - 6371
Alignment:
Q  10 catcatcacaacttaacaatatcataatcaatacctt 46  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  6335 catcataacaacataacaatatcataatcaatacctt 6371  T

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Target: scaffold0278 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 7141 - 7209
Alignment:
Q  209 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaact 277  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||  ||| | ||||||||| ||||||    
T  7141 tcatgaacatcgtataatcttcataggtacttctttaacaacacaggggtagcagacaactcaacaact 7209  T

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Target: scaffold0525 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 4730 - 4700
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaac 181  Q
    |||||||||||||||||||||||||||||||    
T  4730 tcataatcaatatgttaaacaacatagcaac 4700  T

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Target: scaffold0525; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 4812 - 4779
Alignment:
Q  9 acatcatcacaacttaacaatatcataatcaata 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  4812 acatcataacaacttaacaatatcataatcaata 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 4549 - 4513
Alignment:
Q  251 acataggtggaagacaactcgacaactcattgatgat 287  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  4549 acataggtagaagacaactcgacaactcatagatgat 4513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 4329 - 4401
Alignment:
Q  214 aacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcattgatga 286  Q
    |||||| |||||||||| || | ||||| |||||||||||| ||| ||||||||||  || |||||| |||||    
T  4329 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaacttaacgactcatggatga 4401  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 1045 - 1009
Alignment:
Q  151 tcataatcaatatgttaaacaacatagcaacatctta 187  Q
    |||||||||||||  ||||||||||||||||||||||    
T  1045 tcataatcaatatcataaacaacatagcaacatctta 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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