View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18889_low_25 (Length: 216)
Name: NF18889_low_25
Description: NF18889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18889_low_25 |
 |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 28758414 - 28758462
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28758414 |
tattaggtcggacgtcatgaccggagttcgaaccccagtacctccactt |
28758462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 28758554 - 28758593
Alignment:
| Q |
164 |
aagaggccaaatgtatctatttcatgttttatactgtatg |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
28758554 |
aagaggccaaatgtatctatttcatgttttatacggtatg |
28758593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 8810860 - 8810812
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| | ||||||| |||| |
|
|
| T |
8810860 |
tattaggtcggatgtcatgaccggagttcgaaccccggtacctcaactt |
8810812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 13389059 - 13389105
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
13389059 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
13389105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 24712127 - 24712173
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
24712127 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
24712173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 34660880 - 34660834
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
34660880 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
34660834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 4431966 - 4431934
Alignment:
| Q |
37 |
atgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
4431966 |
atgaccggggttcgaacctcagtacctccactt |
4431934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 29894447 - 29894495
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
29894447 |
tattaggtcggatgtcatgaccggggttcgaaccctggtacctccactt |
29894495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 38882757 - 38882801
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccac |
67 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| | |||||||||| |
|
|
| T |
38882757 |
ttaggctggacgtcatgaccggagttcgaaccccggtacctccac |
38882801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 411687 - 411733
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
411687 |
ttaggtcggatgtcatgaccggggttcgaaccccagtacctccactt |
411733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 5598340 - 5598386
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
5598340 |
ttaggtcggatgtcatgaccggagttcgaaccccggtacctccactt |
5598386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 40241534 - 40241573
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
40241534 |
ggatatcatgaccggagttcgaacctcggtacctccactt |
40241573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 52155347 - 52155301
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
52155347 |
ttaggctggatgccatgaccggggttcgaaccccagtacctccactt |
52155301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 13555815 - 13555767
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
13555815 |
tattaggccggatgtcatgaccggggttcgaaccccggtacctccactt |
13555767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 33845686 - 33845650
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctcca |
66 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
33845686 |
ggatgtcatgaccggagttcgaaccccggtacctcca |
33845650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 33948292 - 33948328
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctcca |
66 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
33948292 |
ggatgtcatgaccggagttcgaaccccggtacctcca |
33948328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 64329 - 64368
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
64329 |
ggatgccatgaccggagttcgaaccccagtacctccactt |
64368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 9380037 - 9380076
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
9380037 |
ggatgtcatgaccggggttcgaaccccagtacctccactt |
9380076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 31300079 - 31300040
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
31300079 |
ggatgtcatgaccggggttcgaacctcggtacctccactt |
31300040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 5222658 - 5222616
Alignment:
| Q |
27 |
gttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
5222658 |
gttggatgtcatgatcggggttcgaaccccagtacctccactt |
5222616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 28649455 - 28649409
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||| || |||||||||||| |||||||||||| |
|
|
| T |
28649455 |
ttaggtcggatgtcatgatcgaagttcgaacctcggtacctccactt |
28649409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 8037581 - 8037626
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctcca |
66 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||| ||||||||||| |
|
|
| T |
8037581 |
tattaggttggacgtcatgatcggagttcgaactccagtacctcca |
8037626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 41780302 - 41780346
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccac |
67 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
41780302 |
ttaggttggatgtcatgaccggggttcgaaccctggtacctccac |
41780346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 6266678 - 6266717
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
6266678 |
ggatgtcatgaccggagttcgaaccccggtacctccactt |
6266717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 8939665 - 8939711
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
8939665 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
8939711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 2947802 - 2947763
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
2947802 |
ggatgtcatgaccggggttcgaaccacagtacctccactt |
2947763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 33886459 - 33886413
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
33886459 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
33886413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 41464703 - 41464749
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
41464703 |
ttaggtcggatgccatgaccggggttcgaaccccagtacctccactt |
41464749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 15003667 - 15003711
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccac |
67 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
15003667 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccac |
15003711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 32630698 - 32630658
Alignment:
| Q |
29 |
tggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
32630698 |
tggatgtcatgattggagttcgaacctcggtacctccactt |
32630658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 32635416 - 32635464
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||||||| | |||||||||||| |
|
|
| T |
32635416 |
tattaggtcggatgtcatgatcggggttcgaaccccggtacctccactt |
32635464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 34667090 - 34667129
Alignment:
| Q |
30 |
ggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
34667090 |
ggatgtcatgaccggagttcgaaccccggtacctccactt |
34667129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 13268064 - 13268018
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
13268064 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
13268018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 32922963 - 32922917
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
32922963 |
ttaggctggatgccatgaccggggttcgaaccccagtacctccactt |
32922917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 26732962 - 26732917
Alignment:
| Q |
24 |
taggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
||||| ||||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
26732962 |
taggtcggatgtcatgatcggggttcgaaccccagtacctccactt |
26732917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 11021374 - 11021422
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||||||| | |||||||||||| |
|
|
| T |
11021374 |
tattaggtcggacgtcatgacctgagttcgaaccccggtacctccactt |
11021422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 1287354 - 1287400
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
1287354 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
1287400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 6053140 - 6053094
Alignment:
| Q |
23 |
ttaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
6053140 |
ttaggtcggatgtcatgaccggggttcgaaccccggtacctccactt |
6053094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 42645556 - 42645508
Alignment:
| Q |
21 |
tattaggttggatgtcatgaccggagttcgaacctcagtacctccactt |
69 |
Q |
| |
|
|||||| | ||||||||||| ||| ||||||||||| |||||||||||| |
|
|
| T |
42645556 |
tattagatcggatgtcatgatcggggttcgaacctcggtacctccactt |
42645508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University