View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18892_high_4 (Length: 528)

Name: NF18892_high_4
Description: NF18892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18892_high_4
NF18892_high_4
[»] chr7 (57 HSPs)
chr7 (71-528)||(35443928-35444392)
chr7 (305-380)||(20243256-20243332)
chr7 (300-380)||(44558755-44558834)
chr7 (300-380)||(19416515-19416595)
chr7 (317-374)||(21134437-21134494)
chr7 (319-378)||(5483333-5483392)
chr7 (305-380)||(10244728-10244802)
chr7 (300-375)||(23154572-23154647)
chr7 (305-378)||(4406697-4406771)
chr7 (317-375)||(9522918-9522975)
chr7 (300-368)||(8290449-8290518)
chr7 (319-380)||(34722020-34722081)
chr7 (333-382)||(41250061-41250109)
chr7 (336-380)||(19793805-19793849)
chr7 (347-383)||(29488404-29488440)
chr7 (347-383)||(33232738-33232774)
chr7 (347-383)||(34284880-34284916)
chr7 (300-371)||(37624553-37624624)
chr7 (333-380)||(5458085-5458131)
chr7 (317-380)||(19599146-19599208)
chr7 (305-344)||(20479879-20479917)
chr7 (317-380)||(23198747-23198809)
chr7 (298-380)||(35142127-35142209)
chr7 (300-370)||(36343515-36343586)
chr7 (305-375)||(36769156-36769227)
chr7 (336-379)||(37307891-37307933)
chr7 (336-375)||(44473326-44473365)
chr7 (317-368)||(44651963-44652014)
chr7 (345-380)||(45200194-45200229)
chr7 (317-380)||(46987087-46987149)
chr7 (326-380)||(1285076-1285129)
chr7 (326-380)||(7670435-7670488)
chr7 (305-362)||(8084446-8084503)
chr7 (334-380)||(13955481-13955526)
chr7 (305-374)||(27462421-27462490)
chr7 (299-384)||(33610904-33610989)
chr7 (317-375)||(36765504-36765562)
chr7 (305-370)||(37235322-37235387)
chr7 (334-380)||(38728209-38728255)
chr7 (317-375)||(40036103-40036161)
chr7 (326-380)||(43539111-43539164)
chr7 (317-375)||(47840663-47840721)
chr7 (307-375)||(3671830-3671898)
chr7 (292-380)||(21105604-21105692)
chr7 (300-373)||(24099216-24099288)
chr7 (326-375)||(39280825-39280873)
chr7 (336-380)||(3672569-3672612)
chr7 (334-382)||(5508345-5508393)
chr7 (319-375)||(7872748-7872803)
chr7 (347-383)||(19036443-19036479)
chr7 (348-388)||(20115610-20115650)
chr7 (322-378)||(20205825-20205880)
chr7 (347-383)||(20718157-20718193)
chr7 (305-380)||(30033815-30033890)
chr7 (305-380)||(31038507-31038582)
chr7 (326-386)||(39043750-39043809)
chr7 (305-380)||(39801707-39801782)
[»] chr8 (51 HSPs)
chr8 (305-392)||(37749984-37750071)
chr8 (300-375)||(9663034-9663109)
chr8 (333-383)||(29652216-29652265)
chr8 (300-380)||(39433411-39433491)
chr8 (300-380)||(33451330-33451409)
chr8 (305-378)||(19260564-19260637)
chr8 (317-363)||(34645083-34645129)
chr8 (300-380)||(23852912-23852992)
chr8 (326-375)||(24195255-24195303)
chr8 (334-383)||(26991772-26991820)
chr8 (317-378)||(39525381-39525442)
chr8 (347-383)||(20665704-20665740)
chr8 (305-380)||(30218204-30218279)
chr8 (332-376)||(44068005-44068049)
chr8 (317-380)||(1921721-1921784)
chr8 (345-384)||(13284290-13284329)
chr8 (303-357)||(22975826-22975881)
chr8 (321-380)||(26885640-26885698)
chr8 (333-380)||(27718908-27718954)
chr8 (317-380)||(30623294-30623356)
chr8 (306-380)||(32051518-32051592)
chr8 (317-380)||(34997459-34997522)
chr8 (341-380)||(35372119-35372158)
chr8 (305-375)||(36059346-36059417)
chr8 (305-375)||(38139244-38139315)
chr8 (318-380)||(1764953-1765014)
chr8 (326-380)||(2554219-2554272)
chr8 (334-380)||(8717490-8717535)
chr8 (317-371)||(11052986-11053039)
chr8 (317-375)||(38137802-38137860)
chr8 (329-375)||(44087244-44087290)
chr8 (300-380)||(7996941-7997020)
chr8 (318-383)||(9655996-9656060)
chr8 (305-369)||(12748913-12748977)
chr8 (303-379)||(12800883-12800959)
chr8 (300-380)||(13577077-13577157)
chr8 (300-380)||(19163516-19163596)
chr8 (310-375)||(32192900-32192964)
chr8 (333-378)||(40919373-40919417)
chr8 (347-380)||(44215816-44215849)
chr8 (300-375)||(444419-444494)
chr8 (305-380)||(6953909-6953985)
chr8 (320-384)||(9055406-9055469)
chr8 (305-380)||(15438454-15438529)
chr8 (305-380)||(15529758-15529833)
chr8 (347-383)||(19245361-19245397)
chr8 (347-383)||(19318545-19318581)
chr8 (305-380)||(27587222-27587297)
chr8 (347-383)||(30551067-30551103)
chr8 (305-380)||(33105392-33105467)
chr8 (327-375)||(40048764-40048812)
[»] scaffold0743 (1 HSPs)
scaffold0743 (300-380)||(1399-1479)
[»] chr2 (64 HSPs)
chr2 (317-383)||(19595476-19595542)
chr2 (300-380)||(19976154-19976235)
chr2 (305-383)||(16221331-16221409)
chr2 (300-380)||(25186222-25186302)
chr2 (319-383)||(17280948-17281011)
chr2 (305-380)||(21482504-21482579)
chr2 (297-368)||(21870872-21870944)
chr2 (305-380)||(27411093-27411168)
chr2 (305-380)||(33063987-33064062)
chr2 (333-380)||(29734692-29734738)
chr2 (317-380)||(39761439-39761500)
chr2 (306-380)||(42066713-42066787)
chr2 (299-380)||(2256972-2257053)
chr2 (299-380)||(7052774-7052856)
chr2 (305-383)||(16439346-16439424)
chr2 (313-383)||(25626018-25626087)
chr2 (305-378)||(29133469-29133542)
chr2 (318-380)||(39068707-39068768)
chr2 (300-380)||(9383189-9383269)
chr2 (319-381)||(13143104-13143169)
chr2 (335-380)||(37119274-37119318)
chr2 (347-383)||(3708377-3708413)
chr2 (347-383)||(11869003-11869039)
chr2 (320-380)||(12124546-12124605)
chr2 (347-383)||(35360396-35360432)
chr2 (305-375)||(6765616-6765686)
chr2 (305-380)||(7201508-7201582)
chr2 (305-380)||(15654855-15654929)
chr2 (345-380)||(19967419-19967454)
chr2 (333-380)||(23718936-23718982)
chr2 (333-380)||(24106608-24106654)
chr2 (305-375)||(24592831-24592901)
chr2 (300-374)||(41778924-41778998)
chr2 (317-380)||(41859853-41859915)
chr2 (317-383)||(11817343-11817409)
chr2 (317-375)||(25274827-25274884)
chr2 (313-375)||(25598556-25598617)
chr2 (329-383)||(30956427-30956480)
chr2 (295-380)||(35287639-35287724)
chr2 (299-380)||(41187436-41187517)
chr2 (317-375)||(45474655-45474713)
chr2 (300-357)||(5676763-5676819)
chr2 (326-383)||(18782547-18782603)
chr2 (334-371)||(19159951-19159987)
chr2 (300-380)||(20455892-20455972)
chr2 (319-380)||(24593377-24593437)
chr2 (300-380)||(29544628-29544708)
chr2 (326-375)||(36474768-36474816)
chr2 (318-375)||(37522629-37522686)
chr2 (325-373)||(833075-833122)
chr2 (320-380)||(6723078-6723137)
chr2 (305-380)||(9516994-9517069)
chr2 (308-371)||(9547397-9547460)
chr2 (309-380)||(10332264-10332335)
chr2 (305-380)||(10735816-10735891)
chr2 (324-380)||(16204822-16204877)
chr2 (305-380)||(28771583-28771658)
chr2 (326-386)||(30978357-30978416)
chr2 (333-381)||(32901381-32901428)
chr2 (320-380)||(32957544-32957603)
chr2 (336-380)||(34464426-34464469)
chr2 (333-381)||(35685075-35685122)
chr2 (328-380)||(40853827-40853878)
chr2 (320-380)||(41526777-41526836)
[»] chr1 (49 HSPs)
chr1 (309-380)||(24752636-24752708)
chr1 (305-380)||(14907021-14907096)
chr1 (295-371)||(5552977-5553052)
chr1 (305-380)||(7158774-7158849)
chr1 (305-380)||(42888576-42888651)
chr1 (334-380)||(3393583-3393628)
chr1 (300-380)||(52441491-52441571)
chr1 (305-380)||(34521175-34521250)
chr1 (305-380)||(39452461-39452537)
chr1 (317-380)||(20006071-20006134)
chr1 (317-380)||(21965889-21965952)
chr1 (305-371)||(45774584-45774651)
chr1 (333-375)||(15549250-15549292)
chr1 (318-380)||(29233973-29234034)
chr1 (305-378)||(39879210-39879284)
chr1 (326-380)||(44641528-44641581)
chr1 (333-387)||(45701322-45701375)
chr1 (327-380)||(925434-925487)
chr1 (300-380)||(32944737-32944817)
chr1 (305-381)||(40227829-40227905)
chr1 (300-380)||(42045352-42045432)
chr1 (305-349)||(2684422-2684466)
chr1 (300-375)||(3509921-3509996)
chr1 (317-380)||(7550897-7550959)
chr1 (305-380)||(21400009-21400083)
chr1 (317-388)||(23203315-23203385)
chr1 (315-370)||(28053236-28053291)
chr1 (326-380)||(12213994-12214047)
chr1 (321-383)||(13778814-13778876)
chr1 (334-380)||(17917153-17917198)
chr1 (326-380)||(26755617-26755670)
chr1 (334-380)||(29450996-29451042)
chr1 (333-375)||(40021376-40021418)
chr1 (326-380)||(48646732-48646786)
chr1 (334-380)||(48681948-48681993)
chr1 (317-375)||(49571138-49571196)
chr1 (338-376)||(50727299-50727337)
chr1 (298-371)||(2884427-2884499)
chr1 (319-376)||(13953874-13953930)
chr1 (300-380)||(17139497-17139577)
chr1 (300-380)||(17280065-17280144)
chr1 (333-382)||(30561722-30561770)
chr1 (318-362)||(2665301-2665345)
chr1 (305-380)||(14520945-14521020)
chr1 (305-380)||(15382804-15382879)
chr1 (305-357)||(29251778-29251829)
chr1 (300-371)||(32962573-32962644)
chr1 (305-380)||(45139991-45140066)
chr1 (300-375)||(52494062-52494138)
[»] chr4 (62 HSPs)
chr4 (300-380)||(3936628-3936708)
chr4 (300-380)||(35287487-35287567)
chr4 (305-380)||(9946428-9946503)
chr4 (300-383)||(11949743-11949826)
chr4 (305-380)||(28435233-28435308)
chr4 (305-380)||(56361798-56361874)
chr4 (317-380)||(19479475-19479537)
chr4 (305-378)||(18138265-18138339)
chr4 (317-375)||(40849660-40849718)
chr4 (305-378)||(49125474-49125548)
chr4 (327-380)||(19935169-19935221)
chr4 (334-379)||(22040652-22040696)
chr4 (347-383)||(10262110-10262146)
chr4 (300-380)||(12698598-12698677)
chr4 (347-383)||(19587837-19587873)
chr4 (333-381)||(20403182-20403229)
chr4 (347-383)||(21562309-21562345)
chr4 (347-383)||(24080181-24080217)
chr4 (305-380)||(24664976-24665051)
chr4 (317-389)||(34033325-34033396)
chr4 (305-380)||(38453266-38453341)
chr4 (347-383)||(43329830-43329866)
chr4 (305-380)||(54857600-54857675)
chr4 (305-371)||(11144650-11144716)
chr4 (305-375)||(26097722-26097793)
chr4 (305-375)||(29099694-29099765)
chr4 (317-380)||(32139340-32139403)
chr4 (317-380)||(35021465-35021527)
chr4 (345-380)||(35998000-35998035)
chr4 (334-381)||(48251923-48251969)
chr4 (305-375)||(52620570-52620641)
chr4 (317-380)||(56564981-56565043)
chr4 (326-384)||(897422-897479)
chr4 (300-374)||(8020629-8020701)
chr4 (317-375)||(11180839-11180897)
chr4 (317-375)||(16431622-16431679)
chr4 (326-380)||(20383489-20383542)
chr4 (334-380)||(39171385-39171430)
chr4 (317-375)||(43117447-43117505)
chr4 (334-380)||(43374287-43374332)
chr4 (305-382)||(46676483-46676560)
chr4 (326-387)||(675912-675972)
chr4 (298-378)||(2649711-2649791)
chr4 (300-380)||(8027377-8027457)
chr4 (300-380)||(12671728-12671808)
chr4 (333-378)||(16304112-16304156)
chr4 (335-376)||(19347335-19347375)
chr4 (300-380)||(22164249-22164329)
chr4 (300-380)||(23247578-23247658)
chr4 (300-380)||(23303996-23304076)
chr4 (300-380)||(32180831-32180911)
chr4 (305-380)||(4963338-4963412)
chr4 (320-384)||(9196210-9196273)
chr4 (295-374)||(16470311-16470390)
chr4 (300-375)||(17729432-17729507)
chr4 (320-380)||(19854566-19854625)
chr4 (300-387)||(21317318-21317405)
chr4 (333-377)||(22578930-22578974)
chr4 (305-380)||(43034327-43034402)
chr4 (319-375)||(49308826-49308881)
chr4 (347-383)||(51449896-51449932)
chr4 (305-380)||(56497593-56497668)
[»] scaffold0735 (1 HSPs)
scaffold0735 (305-380)||(1529-1604)
[»] chr6 (31 HSPs)
chr6 (305-380)||(12700406-12700481)
chr6 (317-380)||(34828307-34828370)
chr6 (317-380)||(9111048-9111110)
chr6 (305-378)||(6018644-6018718)
chr6 (305-380)||(24269884-24269960)
chr6 (317-383)||(33975927-33975993)
chr6 (300-380)||(655729-655809)
chr6 (300-380)||(13496117-13496197)
chr6 (300-380)||(24623297-24623377)
chr6 (347-383)||(247343-247379)
chr6 (300-380)||(4494852-4494931)
chr6 (317-380)||(9392666-9392728)
chr6 (340-375)||(14036299-14036334)
chr6 (317-380)||(20744139-20744201)
chr6 (317-380)||(26400865-26400927)
chr6 (306-371)||(2445309-2445374)
chr6 (317-371)||(2726415-2726468)
chr6 (326-376)||(8138465-8138514)
chr6 (334-380)||(12904332-12904377)
chr6 (334-380)||(14350950-14350995)
chr6 (317-375)||(19988827-19988885)
chr6 (334-380)||(32193874-32193919)
chr6 (334-380)||(33938694-33938739)
chr6 (326-375)||(33824887-33824935)
chr6 (305-392)||(1918443-1918530)
chr6 (319-375)||(7541039-7541095)
chr6 (305-380)||(8569710-8569785)
chr6 (347-383)||(12582570-12582606)
chr6 (326-378)||(16204797-16204848)
chr6 (327-387)||(20720789-20720848)
chr6 (347-383)||(34319071-34319107)
[»] chr5 (45 HSPs)
chr5 (305-381)||(25385052-25385127)
chr5 (305-387)||(26655458-26655540)
chr5 (305-387)||(26927043-26927125)
chr5 (317-375)||(16166373-16166431)
chr5 (303-383)||(5150065-5150146)
chr5 (305-380)||(6624777-6624852)
chr5 (305-380)||(31561329-31561404)
chr5 (317-380)||(18489074-18489136)
chr5 (305-380)||(18589853-18589927)
chr5 (300-380)||(22522781-22522861)
chr5 (315-380)||(26409254-26409318)
chr5 (320-377)||(27479631-27479688)
chr5 (300-380)||(34436852-34436932)
chr5 (319-380)||(37932331-37932391)
chr5 (305-380)||(6489008-6489083)
chr5 (299-375)||(12189998-12190073)
chr5 (320-372)||(31708147-31708198)
chr5 (347-383)||(37461795-37461831)
chr5 (305-380)||(40715934-40716009)
chr5 (305-375)||(2530016-2530087)
chr5 (300-371)||(5614775-5614845)
chr5 (348-383)||(13351454-13351489)
chr5 (345-384)||(18147715-18147754)
chr5 (333-380)||(32283580-32283627)
chr5 (345-380)||(33584085-33584120)
chr5 (334-380)||(7713533-7713578)
chr5 (317-375)||(8314759-8314817)
chr5 (326-380)||(10704338-10704391)
chr5 (334-380)||(27903114-27903159)
chr5 (317-371)||(37146999-37147053)
chr5 (317-375)||(42111894-42111952)
chr5 (336-381)||(1488364-1488409)
chr5 (345-378)||(13409553-13409586)
chr5 (327-380)||(13796331-13796383)
chr5 (300-380)||(13864345-13864425)
chr5 (300-380)||(25603980-25604060)
chr5 (300-380)||(28207133-28207213)
chr5 (334-375)||(31602840-31602880)
chr5 (300-375)||(9893651-9893726)
chr5 (305-380)||(15889412-15889487)
chr5 (300-375)||(24636627-24636703)
chr5 (326-378)||(29382669-29382721)
chr5 (300-359)||(32339757-32339816)
chr5 (305-380)||(39980509-39980584)
chr5 (305-380)||(40782357-40782432)
[»] chr3 (48 HSPs)
chr3 (300-380)||(21506740-21506818)
chr3 (306-380)||(52904130-52904203)
chr3 (299-380)||(20370261-20370341)
chr3 (305-373)||(44582732-44582801)
chr3 (300-380)||(47313351-47313432)
chr3 (305-380)||(25340909-25340984)
chr3 (300-375)||(52575953-52576028)
chr3 (317-380)||(28244102-28244164)
chr3 (317-380)||(44579637-44579699)
chr3 (334-381)||(51505873-51505919)
chr3 (298-375)||(25441478-25441555)
chr3 (300-380)||(14827526-14827606)
chr3 (300-380)||(38130939-38131019)
chr3 (326-375)||(38894043-38894091)
chr3 (300-380)||(53996300-53996380)
chr3 (347-383)||(916201-916237)
chr3 (340-380)||(5030206-5030246)
chr3 (317-381)||(54230097-54230160)
chr3 (300-371)||(21160062-21160132)
chr3 (305-383)||(29631184-29631262)
chr3 (321-380)||(32629081-32629139)
chr3 (332-375)||(40862177-40862220)
chr3 (333-380)||(43345021-43345067)
chr3 (333-380)||(43490431-43490477)
chr3 (329-375)||(4216409-4216454)
chr3 (326-380)||(25874131-25874185)
chr3 (326-380)||(33745100-33745153)
chr3 (317-375)||(46090201-46090259)
chr3 (317-375)||(48961053-48961111)
chr3 (334-380)||(49088753-49088798)
chr3 (338-380)||(51379798-51379839)
chr3 (305-380)||(4947811-4947887)
chr3 (300-380)||(7827509-7827589)
chr3 (319-380)||(10617554-10617615)
chr3 (318-375)||(13337034-13337091)
chr3 (305-382)||(25505687-25505763)
chr3 (318-375)||(35191816-35191872)
chr3 (333-378)||(39100098-39100142)
chr3 (319-380)||(43316600-43316661)
chr3 (318-375)||(45096032-45096088)
chr3 (318-375)||(50739088-50739145)
chr3 (318-375)||(50773710-50773767)
chr3 (345-378)||(51402738-51402771)
chr3 (305-380)||(7824808-7824883)
chr3 (305-380)||(22722403-22722478)
chr3 (295-383)||(28266714-28266800)
chr3 (347-383)||(38911170-38911206)
chr3 (347-383)||(44075497-44075533)
[»] scaffold0259 (1 HSPs)
scaffold0259 (305-378)||(5416-5489)
[»] scaffold0154 (1 HSPs)
scaffold0154 (305-380)||(37536-37611)
[»] scaffold0328 (1 HSPs)
scaffold0328 (299-380)||(6980-7062)
[»] scaffold0122 (1 HSPs)
scaffold0122 (334-380)||(14201-14246)
[»] scaffold0031 (1 HSPs)
scaffold0031 (333-387)||(47255-47308)
[»] scaffold0027 (1 HSPs)
scaffold0027 (317-375)||(138112-138170)
[»] scaffold0009 (1 HSPs)
scaffold0009 (333-371)||(189604-189642)
[»] scaffold0007 (1 HSPs)
scaffold0007 (334-380)||(244480-244526)
[»] scaffold0180 (1 HSPs)
scaffold0180 (300-380)||(17733-17812)
[»] scaffold0458 (1 HSPs)
scaffold0458 (305-380)||(11136-11212)
[»] scaffold0393 (1 HSPs)
scaffold0393 (317-357)||(14814-14853)
[»] scaffold0021 (1 HSPs)
scaffold0021 (305-380)||(161142-161217)


Alignment Details
Target: chr7 (Bit Score: 339; Significance: 0; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 71 - 528
Target Start/End: Original strand, 35443928 - 35444392
Alignment:
Q  71 agccaacttgattttttaatctaaaatatctttaagaaatctatttaattacttattcaaataaaaaatagagattcctttgtaaataaataaagatttg 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443928 agccaacttgattttttaatctaaaatatctttaagaaatctatttaattacttattcaaataaaaaatagagattcctttgtaaataaataaagatttg 35444027  T
Q  171 aactgttacnnnnnnnnnnn--taaagatttgaattagctaagttttgaataccgaaagaaattagttaagtttttaaatcaaatattcgaatgaaaaat 268  Q
    |||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35444028 aactgttacaaaaaaaaaaaaataaagatttgaattagctaagttttgaataccgaaagaaattagttaagtttttaaatcaaatattcgaatgaaaaat 35444127  T
Q  269 ataatatttagctgnnnnnnn-acatgatatattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaac 367  Q
    ||||||||||||||        |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  35444128 ataatatttagctgttttttttacatgatatattttcttttggtggtggcagggttcaaaccctcgaccatgcatattattatgcattgttcatatcaac 35444227  T
Q  368 tgagctaaactcatgaaaacttttacatgatat----atttttgttaaaaagtctggtgaccaaaaatttatttttaagtaaataaatagataatttaaa 463  Q
     ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  35444228 ggagctaaactcatgaaaacttttacatgatatatatatttttgttaaaaagtctggtgaccaaaaatttatttttaagtaaataaatagataagctaaa 35444327  T
Q  464 attcgaacccctactcttacataacgcaacgtccgtccaagtcatgctcacgtgaacttttttat 528  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  35444328 attcgaacccctactcttgcataacgcgacgtccgtccgagtcatgctcacgtgaacttttttat 35444392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 20243332 - 20243256
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  20243332 ttttggtggtgtccggggttcaaaccccggaccttgcatattattatgcattgtccataccaactgagctaagctca 20243256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 44558755 - 44558834
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||| ||||||| | |||||||||||| |||||||||||| |||| |||||||||||||||||    
T  44558755 ttttttttttgtggtggccggggtcaaacctcagaccttgcatat-attatgcattgtccataccaactgagctaaactca 44558834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 19416595 - 19416515
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  19416595 tttttttttggtggtggccggggtttgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 19416515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 21134437 - 21134494
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 374  Q
    |||||||||||||| |||||||||||||  |||||||||||  |||||||||||||||    
T  21134437 cggggttcaaacccgcgaccttgcatatatttatgcattgtctatatcaactgagcta 21134494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 5483392 - 5483333
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||| ||||| |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  5483392 gggttcgaacccgcgaccttgcatatatttatacattgtttatatcaactgagctaaact 5483333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 10244802 - 10244728
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| |||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  10244802 tttttgtggtggccgggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctca 10244728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 23154647 - 23154572
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||| |||||| | |||||||||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  23154647 ttttttttttgtggtgtcagggttcaaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 23154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 4406697 - 4406771
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||| | ||||||| ||| | |||||||||||||  |||||||||||  |||||||||||||||||||    
T  4406697 ttttggtggtgtccggggttcgaactcgcgaccttgcatatatttatgcattgtctatatcaactgagctaaact 4406771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 9522975 - 9522918
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||||  ||||||||||| ||||||||||||||||| ||||||||||||    
T  9522975 cggggttcgaaccccaaaccttgcatat-attatgcattgttcataccaactgagctaa 9522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 8290449 - 8290518
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaact 368  Q
    |||| |||| ||||||| |||| ||| |||||| ||||||||||||||||||||||||| |||| |||||    
T  8290449 ttttttttttgtggtggtcgggattcgaaccccggaccttgcatattattatgcattgtccataccaact 8290518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 380
Target Start/End: Original strand, 34722020 - 34722081
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||| | |||||| ||||||||||||||||||||||| |||||||| ||| ||||    
T  34722020 gggttcgaacctcggaccttacatattattatgcattgttcataccaactgagttaagctca 34722081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 41250061 - 41250109
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 382  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  41250061 gaccttgcatat-attatacattgttcttatcaactgagctaaactcatg 41250109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 19793849 - 19793805
Alignment:
Q  336 cttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||    
T  19793849 cttgcatattatcatgcattgtccatatcaactgagttaaactca 19793805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 29488440 - 29488404
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29488440 ttatgcattgttcctatcaactgagctaaactcatga 29488404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 33232738 - 33232774
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33232738 ttatgcattgttcctatcaactgagctaaactcatga 33232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 34284880 - 34284916
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34284880 ttatgcattgttcctatcaactgagctaaactcatga 34284916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 37624624 - 37624553
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||| |||| |||||||| ||| ||| |||||||||||||||||| ||||||||||||| |||| ||||||||    
T  37624624 ttttttttttgtggtggccgggattcgaacccccgaccttgcata-tattatgcattgtccataccaactgag 37624553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 5458085 - 5458131
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  5458085 gaccttgcatat-attatgcattgttcttatcaactgagctaagctca 5458131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 19599208 - 19599146
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||  |||||| |||||||||||| |||||||||||| |||| |||||||| ||||||||    
T  19599208 cggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagttaaactca 19599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 20479917 - 20479879
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatat 344  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  20479917 ttttggtggtggcggg-ttcaaacccccgaccttgcatat 20479879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 23198747 - 23198809
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||||| |||||||| ||||||||    
T  23198747 cggggtttgaaccccggactttgcatatt-ttatgcattgttcataccaactgagttaaactca 23198809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 35142127 - 35142209
Alignment:
Q  298 tattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||| |||||||| |||||||| |||| |  || |||||||| |||||||||||| ||||||||||||||||| ||||    
T  35142127 tattttttttgggtggtggtcggggttcgaacctcaaactttgcatat-attatgcattgtccatatcaactgagctaagctca 35142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 36343515 - 36343586
Alignment:
Q  300 ttttcttttggtggtggcggggt-tcaaacccccgaccttgcatattattatgcattgttcatatcaactga 370  Q
    |||| |||| ||||||||||||  || |||||  ||||||||||||||||||||||||| |||| |||||||    
T  36343515 ttttttttttgtggtggcggggggtcgaaccctggaccttgcatattattatgcattgtccataccaactga 36343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 36769227 - 36769156
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  36769227 ttttggtggtgtccggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 36769156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 37307891 - 37307933
Alignment:
Q  336 cttgcatattattatgcattgttcatatcaactgagctaaactc 379  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  37307891 cttgcatat-attatgcattgttcctatcaactgagctaaactc 37307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 375
Target Start/End: Original strand, 44473326 - 44473365
Alignment:
Q  336 cttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  44473326 cttgcatattattatgcattgtccatatcaactaagctaa 44473365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 44651963 - 44652014
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaact 368  Q
    |||||||| ||||| |||||||||||||  |||||||||||| |||||||||    
T  44651963 cggggttcgaacccgcgaccttgcatatatttatgcattgtttatatcaact 44652014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 45200229 - 45200194
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||||||||||||||||||    
T  45200229 tattatgcattgtccatatcaactgagctaaactca 45200194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 46987149 - 46987087
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  46987149 cggggttcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaagctca 46987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 1285076 - 1285129
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| || ||||||||| |||||||||||||| ||||||||||| ||||||||    
T  1285076 aaccccggatcttgcatat-attatgcattgttcctatcaactgagttaaactca 1285129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 7670488 - 7670435
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||| ||||    
T  7670488 aaccccggaccttgcatat-attatgcattgttcaaaccaactgagctaagctca 7670435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 8084503 - 8084446
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcata 362  Q
    ||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  8084503 ttttggtggtggccggggttcgaaccccggaccttgcatatt-ttatgcattgtccata 8084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 13955526 - 13955481
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||    
T  13955526 accttgcatatt-ttatgcattgttcataccaactgagctaagctca 13955481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 27462421 - 27462490
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 374  Q
    |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||    
T  27462421 tttttgtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 384
Target Start/End: Original strand, 33610904 - 33610989
Alignment:
Q  299 attttcttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaa 384  Q
    ||||| |||| |||||||| || |||| ||| || |||||||||||| |||||||||||| | || |||||||||||| ||||||||    
T  33610904 attttttttttgtggtggccggtgttcgaactccggaccttgcatat-attatgcattgtccgtaacaactgagctaagctcatgaa 33610989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 36765562 - 36765504
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  36765562 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 36765504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 37235387 - 37235322
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactga 370  Q
    |||||||||||| ||||||||||||  | |||||||||||| || ||||||||| ||||||||||||    
T  37235387 ttttggtggtggtcggggttcaaacttcagaccttgcatat-atcatgcattgtccatatcaactga 37235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 38728255 - 38728209
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  38728255 accttgcatatttttatgcattgtccataccaactgagctaagctca 38728209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 40036103 - 40036161
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  40036103 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 40036161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 43539111 - 43539164
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  43539111 aaccccggaccttacatat-attatgcattgttcctatcaactgagctaagctca 43539164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 47840721 - 47840663
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||||| |||||||||||||  |||| ||||||  ||||||| ||||||||    
T  47840721 cggggttcaaacccgcgaccttgcatatatttatacattgtctatatcaattgagctaa 47840663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 3671898 - 3671830
Alignment:
Q  307 ttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||| |||||||  ||| || |||||||||||| ||||||||||||||||| | ||||||||||    
T  3671898 ttggtggtggtcggggtttgaactccagaccttgcatat-attatgcattgttcataccgactgagctaa 3671830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 21105692 - 21105604
Alignment:
Q  292 atgatatattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||| |||| |||| ||||||| |||||||| |||| |  ||||||||||| |||||||||| | |||| |||||||||||| ||||    
T  21105692 atgatattttttttttttgtggtggtcggggttcgaacctcgaaccttgcatat-attatgcattttccataccaactgagctaagctca 21105604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 24099216 - 24099288
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagct 373  Q
    |||| |||| |||||||  |||||||||||||  ||||| ||||| ||||||||||||| ||||||| ||||||    
T  24099216 ttttatttttgtggtggtcgggttcaaaccccgaaccttacatat-attatgcattgtttatatcaattgagct 24099288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 39280825 - 39280873
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||||||||||| |||||||||||||| || ||||||||||||    
T  39280825 aaccccggaccttgcatat-attatgcattgttcttaccaactgagctaa 39280873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 3672569 - 3672612
Alignment:
Q  336 cttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  3672569 cttgcatat-attatgtattgtccatatcaactgagctaaactca 3672612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 5508393 - 5508345
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactcatg 382  Q
    |||||||||||| ||||||||| |  |||||| ||||||||||||||||    
T  5508393 accttgcatatttttatgcattatctatatcatctgagctaaactcatg 5508345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 7872748 - 7872803
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||||| |||||||||||| |||||||||||| | || ||||||||||||    
T  7872748 gggttcgaaccccagaccttgcatat-attatgcattgtccttaccaactgagctaa 7872803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 19036443 - 19036479
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  19036443 ttatgcattgttcctatcaactgagttaaactcatga 19036479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 20115610 - 20115650
Alignment:
Q  348 tatgcattgttcatatcaactgagctaaactcatgaaaact 388  Q
    |||||||||| | || |||||||||||||||||||||||||    
T  20115610 tatgcattgtccctaccaactgagctaaactcatgaaaact 20115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 20205880 - 20205825
Alignment:
Q  322 ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||||||| ||| || ||||| |||||||||||| |||| |||||||||||||||    
T  20205880 ttcaaaccccggactttacatat-attatgcattgtccataccaactgagctaaact 20205825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 20718193 - 20718157
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  20718193 ttatgcattgttcctatcaactgagttaaactcatga 20718157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 30033890 - 30033815
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||| || ||||||  ||||||||| || |||||||||||||| || |||||||||||| ||||    
T  30033890 ttttggtggtggtcgggattgaaaccctagaccttgcaaat-attatgcattgttcttaccaactgagctaagctca 30033815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 31038507 - 31038582
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||||| |||||||||||  || ||||||||| |||| |||||||||||| ||||    
T  31038507 ttttggtggtggccggggtttgaaccccagaccttgcatacaat-atgcattgtccataccaactgagctaagctca 31038582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 39043809 - 39043750
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaa 386  Q
    |||||| ||||| |||||| |||||||||||| |||| |||||||| ||| ||||||||||    
T  39043809 aaccccggacctagcatat-attatgcattgtccataccaactgagttaagctcatgaaaa 39043750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 39801782 - 39801707
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||  |||||||  ||||| || ||||||||| |||||||||||| |||| |||||||||||| ||||    
T  39801782 ttttggtggtggttggggttcgtaccccggatcttgcatat-attatgcattgtccataccaactgagctaagctca 39801707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 37749984 - 37750071
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaactttta 392  Q
    ||||| ||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  37749984 ttttgatggtggccggggttcaaaccccggactttgcatat-attatgcattgttcatatcaactgagctaaactcacgagaactttta 37750071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 9663034 - 9663109
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| ||| ||||||||| | |||| ||| ||||||||| |||||||||||||||||| |||| ||||||||||||    
T  9663034 ttttttttgggtggtggctgagttcgaactcccgaccttacatattattatgcattgtccataccaactgagctaa 9663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 29652265 - 29652216
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  29652265 gaccttgcatat-attatgcattgttcttatcaactgagctaaactcatga 29652216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 39433491 - 39433411
Alignment:
Q  300 ttttcttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| || |||| |||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  39433491 ttttttttttgtggtggccggcgttcgaaccccagaccttgcatatt-ttatgtattgttcatatcaactgagctaagctca 39433411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 33451330 - 33451409
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||||||||||||  ||||||||||| ||||||||||| | |||| |||||||||||| ||||    
T  33451330 ttttttttttgtggtggcagggttcaaacccttgaccttgcata-tattatgcattatccataccaactgagctaagctca 33451409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 19260564 - 19260637
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||||| ||||||  |||||| |||||| ||||| |||||||||||| |||||||||| |||||||||    
T  19260564 ttttggtggtggccggggtttgaaccccggaccttacatat-attatgcattgtacatatcaactaagctaaact 19260637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 34645083 - 34645129
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatat 363  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  34645083 cggggttcgaaccccggaccttgcatattattatgcattgtccatat 34645129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 23852992 - 23852912
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||||||| |||| |||||||| | |||||||||||| |||||||||||| |||| | |||||||||| ||||    
T  23852992 tttttttttggtggtgggcgggattcaaaccacggaccttgcatat-attatgcattgtccataccgactgagctaagctca 23852912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 24195303 - 24195255
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  24195303 aaccccggaccttgcatat-attatgtattgttcatatcaactgagctaa 24195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 26991772 - 26991820
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  26991772 accttgcatat-attatgcattgtccatatcaactgagccaaactcatga 26991820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 39525442 - 39525381
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  39525442 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaaact 39525381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 20665704 - 20665740
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20665704 ttatgcattgttcctatcaactgagctaaactcatga 20665740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 30218279 - 30218204
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||| | ||||||| |||| || ||| |||||||| |||||||||||||||||||||||||  ||||||||    
T  30218279 ttttggtggttgtcggggtttaaactccggacattgcatat-attatgcattgttcatatcaactgaattaaactca 30218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 44068005 - 44068049
Alignment:
Q  332 cgaccttgcatattattatgcattgttcatatcaactgagctaaa 376  Q
    |||||||||||||| ||||||||||| || |||||||||||||||    
T  44068005 cgaccttgcatatttttatgcattgtccacatcaactgagctaaa 44068049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 1921784 - 1921721
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| ||||||||||||  |||||||||||   |||||||| |||||||||||    
T  1921784 cggggttcgaaccccggaccttgcatatatttatgcattgtcgctatcaacttagctaaactca 1921721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 384
Target Start/End: Original strand, 13284290 - 13284329
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaactcatgaa 384  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  13284290 tattatacattgttcatatcaactgagttaaactcatgaa 13284329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 22975881 - 22975826
Alignment:
Q  303 tcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgt 357  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||  |||||||||||    
T  22975881 tcttttggtggtggctggggtttaaaccccagaccttgcatatatttatgcattgt 22975826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 26885640 - 26885698
Alignment:
Q  321 gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||| || ||| |||||| |||||||||||||||| |||||||||||||||||    
T  26885640 gttcgaaccccggatcttacatatt-ttatgcattgttcataccaactgagctaaactca 26885698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 27718908 - 27718954
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  27718908 gaccttgcatat-attatgcattgtccatatcaactgagctaagctca 27718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 30623356 - 30623294
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  30623356 cggggttcgaaccccagaccttgcatat-attatgcattgtccttaccaactgagctaagctca 30623294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 32051518 - 32051592
Alignment:
Q  306 tttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||  |||||| |||||||||||| |||||||||||| || | |||||||||||| ||||    
T  32051518 tttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccaaaccaactgagctaagctca 32051592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 34997522 - 34997459
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||  ||||||||||||  |||||||||||  |||||||||||||||| ||||    
T  34997522 cggggttcgaacccatgaccttgcatatatttatgcattgtctatatcaactgagctaagctca 34997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 35372119 - 35372158
Alignment:
Q  341 atattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  35372119 atattattatgcattgtccttatcaactgagctaaactca 35372158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 36059346 - 36059417
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  | |||||||||  ||||||||||||||||    
T  36059346 ttttggtggtgtccggggttcgaaccctcgaccttgcatatattgatgcattgtctatatcaactgagctaa 36059417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 38139315 - 38139244
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  38139315 ttttggtggtgtccggggttcgaacccacgaccttgcatatatttatacattgtctatatcaactgagctaa 38139244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 1764953 - 1765014
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||| |||||| || |||||||||| |||||| |||||||||||||||||| ||| ||||    
T  1764953 ggggttcgaaccccggatcttgcatatt-ttatgcgttgttcatatcaactgagttaagctca 1765014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 2554219 - 2554272
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  2554219 aaccccagaccttgcatatt-ttatgtattgtccatatcaactgagctaagctca 2554272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 8717490 - 8717535
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||    
T  8717490 accttgcatat-attatgcattgtccataccaactgagctaaactca 8717535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 11053039 - 11052986
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||  |||||||    
T  11053039 cggggttcaaaccccggaccttgcata-tattatgcattgtccatactaactgag 11052986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 38137802 - 38137860
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  38137802 cggggttcgaacccacgaccttgcatatatttatacattgtctatatcaactgagctaa 38137860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 44087290 - 44087244
Alignment:
Q  329 ccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||||||||| ||||||||||| |||| |||||| |||||    
T  44087290 ccccgaccttgcatatttttatgcattgtacataccaactgggctaa 44087244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 7997020 - 7996941
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||| |||||| |||||||  |||||| |||||||||||| ||||||| |||| |||| |||||||||||| ||||    
T  7997020 ttttcttttg-tggtggtcggggtttgaaccccagaccttgcatat-attatgcgttgtccataccaactgagctaagctca 7996941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 9655996 - 9656060
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||| |||| | ||||||||||||| ||||||||||| | || |||||||||||| |||||||    
T  9655996 ggggttcgaacctcggaccttgcatatt-ttatgcattgtccttaccaactgagctaagctcatga 9656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 12748977 - 12748913
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactg 369  Q
    ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| ||||||    
T  12748977 ttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactg 12748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 12800883 - 12800959
Alignment:
Q  303 tcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactc 379  Q
    |||||||||||||| |||||||  |||||| ||||||||||| ||||||| ||||| |||| |||||||  |||||||    
T  12800883 tcttttggtggtggtcggggtttgaaccccggaccttgcata-tattatgtattgtccataccaactgaattaaactc 12800959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 13577157 - 13577077
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||||||||| | || |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  13577157 ttttttttttgtggtggtcggggttcaa-ctccagaccttgcatatgattatgcattgtccataccaactgagttaagctca 13577077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 19163516 - 19163596
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||||||  |||||| |||||||||||  |||||||||||| |||| |||||||||||| ||||    
T  19163516 ttttttttttgtggtggtcggggtttgaaccccggaccttgcataa-attatgcattgtccataccaactgagctaagctca 19163596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 32192964 - 32192900
Alignment:
Q  310 gtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||||||| ||||||  ||||||||||| |||||||||||| |||| ||||| ||||||    
T  32192964 gtggtgtcggggttcgaaccccgaaccttgcatat-attatgcattgtccataccaactaagctaa 32192900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 40919373 - 40919417
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||||||||| |||||||||||||| || |||||||||||||||    
T  40919373 gaccttgcatat-attatgcattgttcctaccaactgagctaaact 40919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 44215816 - 44215849
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||||||||||||||||    
T  44215816 ttatgcattgttcctatcaactgagctaaactca 44215849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 444494 - 444419
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||| |||||||| |||||| ||||||| ||||||||||| ||||||||||||| | || ||| ||||||||    
T  444494 ttttttttttgtggtggccggggtttaaaccccggaccttgcata-tattatgcattgtccttaccaattgagctaa 444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 6953985 - 6953909
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||| |||||||| |||| | ||||||||||||||||||||||| | |||| || |||| |||| ||||    
T  6953985 tttttgtggtggtcggggttcgaaccacagaccttgcatattattatgcattttgcataacagctgaactaagctca 6953909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 9055406 - 9055469
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaa 384  Q
    |||||||||||| ||||||||||| |||||| |||| ||  |||||||||||||||  |||||||    
T  9055406 ggttcaaaccccagaccttgcata-tattatacattatttttatcaactgagctaagttcatgaa 9055469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 15438529 - 15438454
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| | | |||||||||| ||||||||||| ||||||||||||| | || ||| |||||||| ||||    
T  15438529 ttttggtggtggctgagattcaaaccccggaccttgcata-tattatgcattgtccttaccaagtgagctaagctca 15438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 15529833 - 15529758
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| | | |||||||||| ||||||||||| ||||||||||||| | || ||| |||||||| ||||    
T  15529833 ttttggtggtggctgagattcaaaccccggaccttgcata-tattatgcattgtccttaccaagtgagctaagctca 15529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 19245397 - 19245361
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  19245397 ttatgcattgttcctatcatctgagctaaactcatga 19245361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 19318581 - 19318545
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  19318581 ttatgcattgttcctatcatctgagctaaactcatga 19318545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 27587297 - 27587222
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||||| |||||||||||| || ||||||||| | || |||||||||||| ||||    
T  27587297 ttttggtggtggccggggtttgaaccccggaccttgcatat-atcatgcattgtccttaccaactgagctaagctca 27587222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 30551067 - 30551103
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||||  ||||||||||||||||||||||    
T  30551067 ttatgcattgttccaatcaactgagctaaactcatga 30551103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 33105467 - 33105392
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||| ||| ||||||  |||||| |||||||||||| ||||||||||||||| | || ||||||||| ||||    
T  33105467 ttttggtggaggctggggtttgaaccccggaccttgcatat-attatgcattgttcaaaccagctgagctaagctca 33105392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 40048764 - 40048812
Alignment:
Q  327 acccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  40048764 acccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 40048812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 1399 - 1479
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||| |||||| ||||| ||||    
T  1399 tttttttttggtggtggcggggttcgaaccccagacgttgcatattattatgcattgtccataccaactgtgctaagctca 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 19595476 - 19595542
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  19595476 cggggttcgaaccccagaccttgcatattattatgcatggttcataccaactgagttaaactcatga 19595542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 19976235 - 19976154
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| || ||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19976235 ttttttttttgtggtggtcgaggttcgaaccccggaccttgcatattattatgcattgtccataccaactgagctaaactca 19976154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 16221331 - 16221409
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||| |||||||||||| ||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  16221331 tttttgtggtggcggggattcgaaccccgaaccttgcatatt-ttatgcattgttcataccaactgagctaaactcatga 16221409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 25186222 - 25186302
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25186222 ttttttttttgtggtggctggggtttgaaccccggaccttgcatat-attatgcattgtccatatcaactgagctaaactca 25186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 17280948 - 17281011
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||||  ||||||||||| ||||| |||| ||||||||||||||||||| |||||||    
T  17280948 gggttcaaaccccgcaccttgcatat-attatacattattcatatcaactgagctaagctcatga 17281011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 21482504 - 21482579
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||| |||| | | || |||||||||||||||||    
T  21482504 ttttggtggtggtcggggttcaaaccccggaccttgcata-tattatacattatccttaccaactgagctaaactca 21482579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 21870872 - 21870944
Alignment:
Q  297 atattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaact 368  Q
    ||||||| |||| ||||||| |||||||| ||||||  |||||||||||||||||||||||| |||| |||||    
T  21870872 atattttttttttgtggtggtcggggttcgaaccccgaaccttgcatattattatgcattgtccataccaact 21870944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 27411168 - 27411093
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||||||  || ||||||||||||||||| ||||    
T  27411168 ttttggtggtggccggggttcgaaccccggaccttgcatat-attatgcaaggtccatatcaactgagctaagctca 27411093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 33064062 - 33063987
Alignment:
Q  305 ttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| || |||| ||| || |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  33064062 ttttggtggtggccggagttcgaactccggaccttgcatat-attatgcattgtccatatcaactgagctaagctca 33063987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 29734738 - 29734692
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  29734738 gaccttgcatat-attatgcattgtccatatcaactgagctaaactca 29734692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 39761500 - 39761439
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||  |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  39761500 cggggttcaaaccca-gaccttgcatat-attatgcattgtccttatcaactgagctaaactca 39761439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 42066787 - 42066713
Alignment:
Q  306 tttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| | |||||||||||| ||||||||||| |||| |||||||| |||| |||||||||||| ||||    
T  42066787 tttggtggtggccgaggttcaaaccccggaccttgcata-tattgtgcattgtccataccaactgagctaagctca 42066713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 2257053 - 2256972
Alignment:
Q  299 attttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||| |||||||| ||||||| |||||| |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  2257053 attttttttttgtggtggccggggttcgaaccccagaccttgcatat-attatgcattgtccataccaactgagttaagctca 2256972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 7052856 - 7052774
Alignment:
Q  299 attttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| ||||||||||| | ||||||  | |||| ||||||||||||||||||||||||| | || |||||||||||| ||||    
T  7052856 atttttttttggtggtgtccggggtttgagccccggaccttgcatattattatgcattgtccttaccaactgagctaagctca 7052774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 16439424 - 16439346
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||| ||||||||||||||| || || |||||||| |||||||||| || |||  ||| |||||||||||| |||||||    
T  16439424 tttttgtggtggcggggttcgaatccacgaccttgaatattattatacactgtctataccaactgagctaagctcatga 16439346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 25626087 - 25626018
Alignment:
Q  313 gtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||| ||||| ||| ||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  25626087 gtggcggggttcgaaccctcgagcttgcatat-attatgcaatgtccatataaactaagctaaactcatga 25626018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 29133469 - 29133542
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||| ||||||| |||||||| |||||  || |||||||||| |||||||||||||||| |||||||||||||||    
T  29133469 tttttgtggtggtcggggttcgaaccctagatcttgcatatt-ttatgcattgttcataccaactgagctaaact 29133542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 39068707 - 39068768
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||||| || ||||||||| |||||||||||| | ||||||||||||||| ||||    
T  39068707 ggggttcaaaccccggatcttgcatat-attatgcattgtccttatcaactgagctaagctca 39068768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 9383189 - 9383269
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| |||||| |||||||  ||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  9383189 ttttttttttgtggtggcaggggttgaaaccccaaaccttgcatat-attatgcattgtccataccaactgagctaagctca 9383269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 13143169 - 13143104
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgca----ttgttcatatcaactgagctaaactcat 381  Q
    ||||||||||||||||||||||||| |||||||||    ||||||||| ||||||| ||||||||||    
T  13143169 gggttcaaacccccgaccttgcata-tattatgcattgtttgttcataccaactgaactaaactcat 13143104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 37119274 - 37119318
Alignment:
Q  335 ccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  37119274 ccttgcatat-attatgcattgttcatatcaactgagttaaactca 37119318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 3708413 - 3708377
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3708413 ttatgcattgttcctatcaactgagctaaactcatga 3708377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 11869003 - 11869039
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11869003 ttatgcattgttcctatcaactgagctaaactcatga 11869039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 12124605 - 12124546
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||| |||||||||||| |||||||||||| | || |||||||||||||||||    
T  12124605 ggttcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaaactca 12124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 35360396 - 35360432
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35360396 ttatgcattgttcctatcaactgagctaaactcatga 35360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 6765686 - 6765616
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||| || ||||| |||||| |||||| |||||| ||||||||||| |||| ||||||||||||    
T  6765686 ttttggtggtggtcgtggttcgaaccccggaccttacatatt-ttatgcattgtccataccaactgagctaa 6765616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 7201582 - 7201508
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||  |||||| ||| || ||| |||||||| ||||||||||||||| | |||||||||||| ||||    
T  7201582 ttttggtggtggtcgggttcgaactccagactttgcatat-attatgcattgttcaaaccaactgagctaagctca 7201508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 15654855 - 15654929
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| | |||||| |||||| ||||||||||||| ||||||||| | | || |||||||||||| ||||    
T  15654855 ttttggtggtgtccgggttcgaaccccagaccttgcatatt-ttatgcattatccttaccaactgagctaagctca 15654929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 19967454 - 19967419
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19967454 tattatgcattgttcatatcaactgagctaagctca 19967419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 23718982 - 23718936
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  23718982 gaccttgcatatt-ttatgcgttgttcaaatcaactgagctaaactca 23718936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 24106654 - 24106608
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  24106654 gaccttgcatatt-ttatgcgttgttcaaatcaactgagctaaactca 24106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 24592831 - 24592901
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| | || ||||||||||||    
T  24592831 ttttggtggtggccggggtttgaaccccagaccttgcatat-attatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 41778924 - 41778998
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 374  Q
    |||| ||||||||||||| ||| ||| |||| | |||||||||||| |||||||||||| || |||||||||||||    
T  41778924 tttttttttggtggtggccgggattcgaacctcggaccttgcatat-attatgcattgtccaaatcaactgagcta 41778998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 41859915 - 41859853
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  41859915 cggggtttgaaccccagaccttgcatatt-ttatgcattgtccataccaactgagttaaactca 41859853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 11817343 - 11817409
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||| ||||||  ||||| ||||||||||| |||||| |||| |||||||| ||| |||||||    
T  11817343 cggggttcgaacccctaaccttacatattattatacattgtccataccaactgagttaagctcatga 11817409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 25274827 - 25274884
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| |||||| |||||| ||||| |||||||||||||| || ||||||||||||    
T  25274827 cggggttcgaaccccagaccttacatat-attatgcattgttcttaccaactgagctaa 25274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 25598556 - 25598617
Alignment:
Q  313 gtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||| |||||| |||||  |||||||||||| |||||||||||| |||| ||||||||||||    
T  25598556 gtggccgggttcgaaccctggaccttgcatat-attatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 30956480 - 30956427
Alignment:
Q  329 ccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||| ||||||||||| || |||||||||||||| |||||||||||| |||||||    
T  30956480 ccccaaccttgcatataat-atgcattgttcataccaactgagctaagctcatga 30956427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 35287639 - 35287724
Alignment:
Q  295 atatattttcttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||| |||| ||||||||  | ||| ||||||| |||||||||| | |||||||||||| | |||||||||||| |||||||    
T  35287639 atatattttttttttgtggtggccagagtttaaaccccggaccttgcatct-attatgcattgtccctatcaactgagccaaactca 35287724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 380
Target Start/End: Original strand, 41187436 - 41187517
Alignment:
Q  299 attttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||| |||||| | ||||||| |||||| ||| ||||||||| ||||||||||| |||| ||||| |||||| ||||    
T  41187436 attttctttttgtggtgaccggggttcgaaccccggactttgcatatt-ttatgcattgtccataccaactaagctaagctca 41187517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 45474713 - 45474655
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  45474713 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 45474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 5676819 - 5676763
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgt 357  Q
    |||| |||||||||||||||||||  |||||||  ||||||||| |||||||||||||    
T  5676819 tttttttttggtggtggcggggtttgaacccccacccttgcata-tattatgcattgt 5676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 18782547 - 18782603
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||| |||||||||||| |||||||||||||  || ||||| ||||||||||||||    
T  18782547 aaccccagaccttgcatat-attatgcattgtttctaccaacttagctaaactcatga 18782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 371
Target Start/End: Complemental strand, 19159987 - 19159951
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19159987 accttgcatat-attatgcattgttcatatcaactgag 19159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 20455972 - 20455892
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||| ||| |||||| |||||||||||| |||||||||||| |||| ||| |||||||| ||||    
T  20455972 ttttttttttgtggtggccgggattcgaaccccggaccttgcatat-attatgcattgtccataccaattgagctaagctca 20455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 24593437 - 24593377
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  24593437 gggttcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaagctca 24593377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 29544708 - 29544628
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| | || ||| |||||||| ||||    
T  29544708 tttttttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccctaccaattgagctaagctca 29544628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 36474816 - 36474768
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  36474816 aaccccggaccttgcatatt-ttatgcattgtccctatcaactgagctaa 36474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 37522686 - 37522629
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  37522686 ggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 37522629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 833075 - 833122
Alignment:
Q  325 aaacccccgaccttgcatattattatgcattgttcatatcaactgagct 373  Q
    ||||||| |||||||||||| |||||||||||| |||| ||||||||||    
T  833075 aaaccccagaccttgcatat-attatgcattgtccataccaactgagct 833122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 6723078 - 6723137
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||  |||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  6723078 ggttcgaaccctggaccttgcatat-attatacattgtccatatcaactgagttaaactca 6723137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 9516994 - 9517069
Alignment:
Q  305 ttttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| | ||||| || ||| || |||| |||| ||||||||||||||||| |||||||||||| ||||    
T  9516994 ttttggtggtggccgaggttcgaaacccggatcttgtatat-attatgcattgttcataccaactgagctaatctca 9517069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 9547397 - 9547460
Alignment:
Q  308 tggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||| |||||||  ||||||  ||||||||||| |||||||||||| |||||||||||||    
T  9547397 tggtggtggtcggggtttgaaccccaaaccttgcatat-attatgcattgtccatatcaactgag 9547460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 10332264 - 10332335
Alignment:
Q  309 ggtggtggcggggttca-aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||||||   |||| |||||||| ||||| |||||||||||| | ||||||||||||||| ||||    
T  10332264 ggtggtggcggggttttgaacctccgaccttccatat-attatgcattgtccttatcaactgagctaagctca 10332335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 10735816 - 10735891
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||||| ||||||||||| |||||||||| || | || |||||||||||| ||||    
T  10735816 ttttggtggtggccggggtttgaaccccggaccttgcata-tattatgcatcgtccctaccaactgagctaagctca 10735891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 16204822 - 16204877
Alignment:
Q  324 caaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||||||||| |||||||||||| | ||||||||||| ||| ||||    
T  16204822 caaaccccagaccttgcatat-attatgcattgtccttatcaactgagttaagctca 16204877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 28771658 - 28771583
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| | ||||||| |||| | || ||||||||| |||||||||||| | || |||||||||||||||||    
T  28771658 ttttggtggtgtccggggttcgaaccgcggatcttgcatat-attatgcattgtccttaccaactgagctaaactca 28771583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 30978416 - 30978357
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaa 386  Q
    |||||| |||||||||||| |||||||||| | |||| ||| |||||||||||||| ||||    
T  30978416 aacccctgaccttgcatat-attatgcattatccataccaattgagctaaactcattaaaa 30978357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 32901428 - 32901381
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  32901428 gacctttcatatt-ttatgcattatccatatcaactgagctaaactcat 32901381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 32957544 - 32957603
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||  ||||| ||||| ||||||||||||||||| |||| ||||||||||||    
T  32957544 ggtttaaaccccaaaccttacatat-attatgcattgttcataccaaccgagctaaactca 32957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 34464426 - 34464469
Alignment:
Q  336 cttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||    
T  34464426 cttgcatat-attatgcattgtccataccaactgagctaaactca 34464469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 35685075 - 35685122
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||||||||||| |||||||||||| | || ||||||||||||||||||    
T  35685075 gaccttgcatat-attatgcattgtccttaccaactgagctaaactcat 35685122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 380
Target Start/End: Original strand, 40853827 - 40853878
Alignment:
Q  328 cccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  40853827 ccccggaccttgcatat-attatgcatatttcatatcaactgagctaagctca 40853878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 41526777 - 41526836
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||| |||||||||||| | |||||||||| ||| ||||||||||||| ||||    
T  41526777 ggttcgaaccccagaccttgcatat-actatgcattgtccatgtcaactgagctaagctca 41526836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 24752636 - 24752708
Alignment:
Q  309 ggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  24752636 ggtggtggccggggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaagctca 24752708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 14907021 - 14907096
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||| ||| |||| ||| ||||    
T  14907021 ttttggtggtggtggggttcgaacccccgaccttacatattattatacattgttcataccaattgagttaagctca 14907096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 5552977 - 5553052
Alignment:
Q  295 atatattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||| |||| ||||||||||||||| ||  ||||||||| |||| |||||| ||||||||||||||||||||    
T  5552977 atatattttttttttgtggtggcggggttcgaattcccgaccttacata-tattatacattgttcatatcaactgag 5553052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 7158849 - 7158774
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||| |||||| || ||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  7158849 ttttggtggtggtcggggctcaaactccggaccttgcatatt-ttatgcattgtccatatcaactgggctaaactca 7158774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 42888651 - 42888576
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  42888651 ttttggtggtggcgggggttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 42888576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 3393583 - 3393628
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  3393583 accttgcatat-attatgcattgttcatatcaactgagctaaactca 3393628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 52441491 - 52441571
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| ||||||||| ||||||||||| || ||||||||||| |||||||||||||  ||| |||||||||||| ||||    
T  52441491 ttttctttgggtggtggccggggttcaaacgccggaccttgcata-tattatgcattgtctataccaactgagctaagctca 52441571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 34521175 - 34521250
Alignment:
Q  305 ttttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| | ||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||||||||    
T  34521175 ttttggtggtggccgaggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaaactca 34521250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 39452537 - 39452461
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||||  || ||| ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  39452537 tttttgtggtggccggggtttgaatcccagaccttgcatatttttatgcattgttcataccaactgagctaagctca 39452461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 20006134 - 20006071
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||| ||| ||||    
T  20006134 cggggttcaaaccccgaaccctgcatattattatgcattgtccatgtcaactgagttaatctca 20006071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 21965889 - 21965952
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| ||||||| ||||  ||||||||| ||||||||||||||||||| ||||    
T  21965889 cggggttcgaaccccggaccttgtatatatttatgcattattcatatcaactgagctaagctca 21965952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 45774651 - 45774584
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||| |||||||| ||||||| |||||| ||||||||||||||||||| |||||| ||| ||||||||    
T  45774651 tttttgtggtggctggggttcgaaccccggaccttgcatattattatgtattgtttataccaactgag 45774584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 15549250 - 15549292
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  15549250 gaccttgcatattattatgcattgtctatatcaactgagctaa 15549292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 29233973 - 29234034
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||| |||||| ||||||||||||| |||||||||||  ||| |||||||||||||||||    
T  29233973 ggggttcgaaccccagaccttgcatatt-ttatgcattgtctataccaactgagctaaactca 29234034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 39879210 - 39879284
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  39879210 ttttggtggtgtctggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaaact 39879284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 44641581 - 44641528
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||||||||||    
T  44641581 aaccccgggccttgcatat-attatgcattgtccatatcaactgagctaaactca 44641528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 45701375 - 45701322
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  45701375 gaccttacatatt-ttatgcattgttcataccaactgagctaaactcacgaaaac 45701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 925434 - 925487
Alignment:
Q  327 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||| |||| ||||    
T  925434 accccggaccttgcatatttttatgcattgtccatatcaactgaactaagctca 925487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 32944817 - 32944737
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||||||| |||||||| |||||| ||| |||||||| |||||||||||| |||| ||||| |||||| ||||    
T  32944817 tttttttttggtggtggtcggggttcgaaccccagacgttgcatat-attatgcattgtccataccaactaagctaagctca 32944737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 40227905 - 40227829
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||| ||||||| |||||||| |||||| ||||||| ||||| ||||||||||| |||| |||||||||||| |||||    
T  40227905 tttttgtggtggtcggggttcgaaccccagaccttgtatatt-ttatgcattgtccataccaactgagctaagctcat 40227829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 42045352 - 42045432
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| ||||||  ||| || |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  42045352 tttttttttggtggtggccggggtttgaactccagaccttgcatat-attatgcattgtccataccaactgagctaagctca 42045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 2684422 - 2684466
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattatta 349  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||    
T  2684422 tttttgtggtggcggggttcgaacctccgaccttgcatattatta 2684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 3509921 - 3509996
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccg-accttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| ||||||||||||| | |||  |||||||| ||||||||||| |||||||||||| |||| ||||||||||||    
T  3509921 tttttttttggtggtggccgagtttgaacccccggaccttgcatat-attatgcattgtccataccaactgagctaa 3509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 7550959 - 7550897
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| || ||| ||||||| ||||| ||||||||||||||||||||||||| ||| ||||    
T  7550959 cggggttcgaatcccggaccttgtatatt-ttatgcattgttcatatcaactgagttaagctca 7550897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 21400009 - 21400083
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| | |||||| |||||  ||||||||||| ||||||||||||| | || |||||||||||| ||||    
T  21400009 ttttggtggtgtcagggttcgaacccaagaccttgcata-tattatgcattgtccctaccaactgagctaagctca 21400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 388
Target Start/End: Complemental strand, 23203385 - 23203315
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaact 388  Q
    |||||||  ||||||  |||||||||||| |||||||||||||  | |||||||||||| ||||||||||||    
T  23203385 cggggtttgaaccccgaaccttgcatatt-ttatgcattgttccaaccaactgagctaagctcatgaaaact 23203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 28053236 - 28053291
Alignment:
Q  315 ggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactga 370  Q
    ||||| |||| ||||| ||||||| |||||||||||||||||| |||| |||||||    
T  28053236 ggcggagttcgaaccctcgaccttacatattattatgcattgtccataccaactga 28053291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 12214047 - 12213994
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  12214047 aaccccagaccttgcatat-attatgtattgttcctatcaactgagctaagctca 12213994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 13778814 - 13778876
Alignment:
Q  321 gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||| |||||| ||||||  |||||||||||||| || |||||||||| |||||| |||||||    
T  13778814 gttcgaaccccggaccttatatattattatgcatcgtccatatcaactaagctaagctcatga 13778876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 17917153 - 17917198
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  17917153 accttacatatt-ttatgcattgtccatatcaactgagctaaactca 17917198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 26755670 - 26755617
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||||||||| || ||||||||| ||||||||||||||||| ||||    
T  26755670 aaccccggaccttgcatat-ataatgcattgtccatatcaactgagctaagctca 26755617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 29450996 - 29451042
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||||||||||||||| |||| |||||||| ||| ||||    
T  29450996 accttgcatattattatgcattgtccataccaactgagttaagctca 29451042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 40021418 - 40021376
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||    
T  40021418 gaccttgtatattattatgcattgtccataccaactgagctaa 40021376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 48646732 - 48646786
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||||||||||||||||||||||||| ||||  ||||||| ||| ||||    
T  48646732 aaccccggaccttgcatattattatgcattgtccatacaaactgagttaagctca 48646786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 48681948 - 48681993
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  48681948 accttgcatat-attatgcattgttcataccaactgagctaagctca 48681993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 49571196 - 49571138
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  49571196 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 49571138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 376
Target Start/End: Complemental strand, 50727337 - 50727299
Alignment:
Q  338 tgcatattattatgcattgttcatatcaactgagctaaa 376  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  50727337 tgcatattattatgcattgttcataccaactgatctaaa 50727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 2884427 - 2884499
Alignment:
Q  298 tattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||||| |||| |||||| ||| |||  ||||||||| |||| |||| |||||||||||| |||||||||||||    
T  2884427 tattttttttttgtggtgacggagtttgaacccccgatcttgtatat-attatgcattgtccatatcaactgag 2884499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 13953874 - 13953930
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaa 376  Q
    |||||||||| ||  ||||||||||| ||||||||||||||||||||| |||| ||||    
T  13953874 gggttcaaacaccaaaccttgcatat-attatgcattgttcatatcaattgagttaaa 13953930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 17139497 - 17139577
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||||||| |||||||  |||||| ||||||| |||| |||||||||||| | || |||||||||||| ||||    
T  17139497 tttttttttggtggtggtcggggtttgaaccccggaccttgaatat-attatgcattgtccctaccaactgagctaagctca 17139577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 17280065 - 17280144
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||||||| ||||||||||||| | ||||||||||  ||||| ||||||| |||| |||||||||||| ||||    
T  17280065 tttttttttggtggtggtcggggttcaaaccgcagaccttgcat-gtatta-gcattgtccataccaactgagctaagctca 17280144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 30561770 - 30561722
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 382  Q
    |||||||||||| |||||||||||||| || ||||| |||||||||||||    
T  30561770 gaccttgcatat-attatgcattgttcttaccaacttagctaaactcatg 30561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 2665301 - 2665345
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcata 362  Q
    ||||||| |||| | ||||||||||||||||||||||||| ||||    
T  2665301 ggggttcgaacctcagaccttgcatattattatgcattgtccata 2665345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 14521020 - 14520945
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||||| ||||||  || ||||||||| ||||||||||| |||| |||||||||||| ||||    
T  14521020 tttttgtggtggccggggttcgaaccccaaactttgcatatt-ttatgcattgtccataccaactgagctaagctca 14520945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 15382804 - 15382879
Alignment:
Q  305 ttttggtggtggcggggtt-caaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||| | |||| | |||||||||||| ||||| |||||||||||||||||||| ||| ||||    
T  15382804 tttttgtggtggccgggtttcgaacctcggaccttgcatat-attatacattgttcatatcaactgagttaagctca 15382879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 29251829 - 29251778
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgt 357  Q
    ||||||||||||| |||||| |||| | ||||||||||| |||||||||||||    
T  29251829 ttttggtggtggccgggttcgaacctcagaccttgcata-tattatgcattgt 29251778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 32962644 - 32962573
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||| ||| |||||||| |||||||  |||||  ||||||||||||| |||||||||||||||| ||||||||    
T  32962644 ttttttttgggtggtggtcggggtttgaaccctggaccttgcatatt-ttatgcattgttcataccaactgag 32962573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 45139991 - 45140066
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| |||||| |||| |  |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  45139991 tttttgtggtggccggggtttaaactctggaccttgcatat-attatgcattgtccataccaactgagctaagctca 45140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 52494138 - 52494062
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||| |||||||| ||||||  |||| | ||||||||||||| ||||||||||| ||||  |||||||||||    
T  52494138 ttttgtttttgtggtggctggggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaa 52494062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 3936708 - 3936628
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  3936708 ttttttttttgtggtggccggggttcgaaccccggaccttgcatat-attatgcattgttcataccaactgagctaagctca 3936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 35287487 - 35287567
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||||||  |||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  35287487 ttttttttttgtggtggccggggttggaaccccggaccttgcatatt-ttatgcattgttcataccaactgagctaagctca 35287567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 9946503 - 9946428
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  9946503 ttttggtggtggtcggggtttgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 9946428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 11949743 - 11949826
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||| |||| ||||||| |||||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||| |||||||    
T  11949743 ttttttttttgtggtggtcggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctcatga 11949826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 28435233 - 28435308
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  ||||||  ||||||||||| |||||||||||| |||| |||||||||||||||||    
T  28435233 ttttggtggtggctggggtttgaaccccgaaccttgcatat-attatgcattgtccataccaactgagctaaactca 28435308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 56361798 - 56361874
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||||| |||||  ||||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  56361798 tttttgtggtggccggggttcgaaccctagaccttgtatattatcatgcattgttcatatcaactgagttaagctca 56361874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 19479475 - 19479537
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||  |||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  19479475 cggggtttgaaccccggaccttgcatat-attatgcattgttcatattaactgagctaagctca 19479537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 18138339 - 18138265
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  ||||||||||   |||||||||||||||||||    
T  18138339 ttttggtggtgtccggggttcgaacccgcgaccttgcatatatttatgcattgactatatcaactgagctaaact 18138265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 40849718 - 40849660
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||||| |||||||||||||  |||| |||| || ||||||||||||||||    
T  40849718 cggggttcaaacccgcgaccttgcatatatttatacattatttatatcaactgagctaa 40849660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 49125548 - 49125474
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  ||||||||||   |||||||||||||||||||    
T  49125548 ttttggtggtgtccggggttcgaacccgcgaccttgcatatatttatgcattgactatatcaactgagctaaact 49125474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 19935169 - 19935221
Alignment:
Q  327 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  19935169 accctcgaccttgcatag-attatgcattgttcttatcaactgagctaaactca 19935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 22040696 - 22040652
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactc 379  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  22040696 accttgcatat-attatgcattgtccatatcaactgagctaaactc 22040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 10262110 - 10262146
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10262110 ttatgcattgttcctatcaactgagctaaactcatga 10262146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 12698677 - 12698598
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||||  | ||| |||||| |||||||||||| |||||||||||| || |||||||||||||| ||||    
T  12698677 ttttttttttgtggtggccagattcgaaccccagaccttgcatat-attatgcattgtccaaatcaactgagctaagctca 12698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 19587873 - 19587837
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19587873 ttatgcattgttcctatcaactgagctaaactcatga 19587837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 20403182 - 20403229
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  20403182 gaccttgcatat-attatgcattgttcctatcaactgagctaagctcat 20403229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 21562345 - 21562309
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21562345 ttatgcattgttcctatcaactgagctaaactcatga 21562309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 24080181 - 24080217
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24080181 ttatgcattgttcctatcaactgagctaaactcatga 24080217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 24664976 - 24665051
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||| |||||||| |||||| ||||||||||| ||||||||||| | |||| |||||||||||| ||||    
T  24664976 tttttgtggtggtcggggttcgaaccccggaccttgcata-tattatgcattctccataccaactgagctaagctca 24665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 389
Target Start/End: Complemental strand, 34033396 - 34033325
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaactt 389  Q
    |||||||||||| || ||||||||||||| |||||||| |||| ||||||||||| ||| |||| || |||||    
T  34033396 cggggttcaaactccggaccttgcatatt-ttatgcatggttcttatcaactgagttaagctcacgataactt 34033325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 38453341 - 38453266
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||| |||||  |||||||||||| |||||||||||| |||  |||||||||||| ||||    
T  38453341 ttttggtggtggctggggttcgaaccctggaccttgcatat-attatgcattgtccatgccaactgagctaagctca 38453266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 43329866 - 43329830
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43329866 ttatgcattgttcctatcaactgagctaaactcatga 43329830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 54857600 - 54857675
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||||| ||||||||||||| |||||||||||| ||| |||| ||||||| ||||    
T  54857600 ttttggtggtggccggggtttgaaccccggaccttgcatatt-ttatgcattgtttataccaaccgagctaagctca 54857675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 11144650 - 11144716
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||||| | |||||||||||||| ||||||||||| |||||||||||||   |||||||||||    
T  11144650 ttttggtggtgtccggggttcaaaccccagaccttgcata-tattatgcattgtctttatcaactgag 11144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 26097722 - 26097793
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||  |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  26097722 ttttggtggtgttcggggttcgaacccgcgaccttgcatatatttatacattgtatatatcaactgagctaa 26097793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 29099694 - 29099765
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| | ||| ||| ||||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  29099694 ttttggtggtgtctgggattcgaacccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 29099765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 32139403 - 32139340
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| | ||||||||||||||| ||||    
T  32139403 cggggttcgaaccccggaccttgcatatatttatgtattgtccctatcaactgagctaagctca 32139340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 35021465 - 35021527
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| ||||||  |||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  35021465 cggggttcgaaccccgaaccttgcatatt-ttatgtattgtccatatcaactgagctaagctca 35021527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 35998035 - 35998000
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||||||||||||||||||    
T  35998035 tattatgcattgtccatatcaactgagctaaactca 35998000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 381
Target Start/End: Original strand, 48251923 - 48251969
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  48251923 accttgcatat-attatacattgttcatatcaactgagctaaattcat 48251969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 52620641 - 52620570
Alignment:
Q  305 ttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| | || |||| ||||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  52620641 ttttggtggtgtccggagttcgaacccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 52620570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 56564981 - 56565043
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||  ||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  56564981 cggggttcgaaccctagaccttgcatatt-ttatgcattgtccatatcaattgagctaagctca 56565043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 897479 - 897422
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaa 384  Q
    |||||| |||||| ||||| ||||| |||||| |||| |||||||||||||||||||||    
T  897479 aaccccggaccttacatat-attatacattgtccataccaactgagctaaactcatgaa 897422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 8020629 - 8020701
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 374  Q
    |||| ||||||||||||| |||||| || || |||||||||||| ||||||||||||| || | |||||||||||    
T  8020629 tttttttttggtggtggccgggttcgaa-cctcgaccttgcata-tattatgcattgtccaaaccaactgagcta 8020701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 11180897 - 11180839
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  11180897 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 11180839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 16431679 - 16431622
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||  |||||| ||||||||||||| ||||||||||| |||| ||||||||||||    
T  16431679 cggggtttgaaccccagaccttgcatatt-ttatgcattgtccataccaactgagctaa 16431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 20383542 - 20383489
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  20383542 aaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctca 20383489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 39171385 - 39171430
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  39171385 accttgcatatt-ttatgcattgtccatatcaactgagctaagctca 39171430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 43117505 - 43117447
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  43117505 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 43117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 43374287 - 43374332
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  43374287 accttgcatatt-ttatgcattgtccatatcaactgagctaagctca 43374332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 46676483 - 46676560
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 382  Q
    ||||||||||| | |||| || |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||||    
T  46676483 ttttggtggtgtctgggggtcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaagctcatg 46676560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 675972 - 675912
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    |||||| |||||||||||| |||||||||||| || | |||||||||||| |||||| ||||    
T  675972 aaccccggaccttgcatat-attatgcattgtccaaaccaactgagctaagctcatgcaaac 675912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 2649711 - 2649791
Alignment:
Q  298 tattttcttttggtggtggcg-gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||| |||| ||||||||  |||||| ||| || |||||||||||| |||||||||||| | || |||||||||||||||    
T  2649711 tattttttttttgtggtggctagggttcgaactccggaccttgcatat-attatgcattgtccctaccaactgagctaaact 2649791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 8027377 - 8027457
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||||||  ||||||||| ||||||||| |||||||||| | | || |||||||||||||||||    
T  8027377 ttttttttttgtggtggtcggggtttgaacccccgatcttgcatat-attatgcattatccttaccaactgagctaaactca 8027457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 12671728 - 12671808
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| || ||||| |||||| || |||||||||| |||||||||||  ||| |||||||||||||||||    
T  12671728 ttttttttttgtggtggtcgaggttcgaaccccggatcttgcatatt-ttatgcattgtctataccaactgagctaaactca 12671808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 16304112 - 16304156
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||    
T  16304112 gaccttgcatat-attatgcattgtccataccaactgagctaaact 16304156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 19347335 - 19347375
Alignment:
Q  335 ccttgcatattattatgcattgttcatatcaactgagctaaa 376  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  19347335 ccttgcatatt-ttatgcattgtccatatcaactgagctaaa 19347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 22164249 - 22164329
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||| |||||| |||||||  |||||| |||||| ||||| |||||||||||||| || ||||| |||||||||||    
T  22164249 tttttttttgttggtggtcggggtttgaaccccagaccttacatat-attatgcattgttcctaccaactaagctaaactca 22164329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 23247578 - 23247658
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| |||||| ||||||| ||||||||||| |||||||| |||| |||| |||| ||||||| ||||    
T  23247578 ttttttttttgtggtggccggggtttaaaccccagaccttgcata-tattatgcgttgtccataccaaccgagctaagctca 23247658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 23303996 - 23304076
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| |||||||  ||||| ||||||||||| |||||||| |||| | || |||||||||||| ||||    
T  23303996 tttttttttggtggtggccggggttcgcaccccggaccttgcata-tattatgccttgtccctaccaactgagctaagctca 23304076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 32180911 - 32180831
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||||||| |||||| ||| ||||||||| |||||||||||  ||| |||||||||||| ||||    
T  32180911 ttttttttttgtggtggtcggggttcgaaccccagactttgcatatt-ttatgcattgtctataccaactgagctaagctca 32180831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 4963338 - 4963412
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||| |||||| |||||| |||||| |||||  |||| |||||||| |||||||||||||    
T  4963338 ttttggtggtggccggggttcgaacccc-gaccttacatatt-ttatgtgttgtccatatcaattgagctaaactca 4963412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 9196273 - 9196210
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaa 384  Q
    |||||||||||  ||||| |||||| |||||||||||| |||||||||| || ||| ||||||||    
T  9196273 ggttcaaaccctggacctggcatat-attatgcattgtccatatcaactaagttaagctcatgaa 9196210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 16470390 - 16470311
Alignment:
Q  295 atatattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 374  Q
    |||| |||| |||| ||||||| |||||||| |||||  ||||||||||||| ||||||||||| |||| ||| |||||||    
T  16470390 atatcttttttttttgtggtggtcggggttcgaaccctggaccttgcatatt-ttatgcattgtccataccaattgagcta 16470311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 17729507 - 17729432
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||| ||||||| |||||||  |||||| |||||||||||| ||||||||  ||||||| ||||||||||||    
T  17729507 ttttttttttgtggtggtcggggtttgaaccccagaccttgcatat-attatgcaaggttcataccaactgagctaa 17729432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 19854625 - 19854566
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||| || ||||||||| |||||||||||| |||| |||||||||||| ||||    
T  19854625 ggttcgaaccccggatcttgcatat-attatgcattgtccataccaactgagctaagctca 19854566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 21317318 - 21317405
Alignment:
Q  300 ttttcttttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    |||||||||||||||||  | ||||  |||||| |||||||||||| ||||||||||||   || |||||||||||| |||| ||||||    
T  21317318 ttttcttttggtggtggttgaggtttgaacccctgaccttgcatat-attatgcattgtctctaccaactgagctaagctcacgaaaac 21317405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 22578974 - 22578930
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaac 377  Q
    |||||| |||||| |||| ||||||||||||||||||| ||||||    
T  22578974 gaccttacatatttttatacattgttcatatcaactgaactaaac 22578930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 43034327 - 43034402
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||| | |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  43034327 ttttggtggtggccggggtttgaacctcagaccttgcatat-attatgcattgtccataccaactgagttaagctca 43034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 49308881 - 49308826
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||||| |||||||||||| |||||||||||| | | |||||||||||||    
T  49308881 gggttcgaaccccagaccttgcatat-attatgcattgtccttgtcaactgagctaa 49308826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 51449932 - 51449896
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  51449932 ttatgtattgttcctatcaactgagctaaactcatga 51449896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 56497593 - 56497668
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||| ||| |||||| ||||||||||| ||||||||||||| | || ||| |||||||| ||||    
T  56497593 ttttggtggtggccgggattcgaaccccagaccttgcata-tattatgcattgtccttaccaattgagctaagctca 56497668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 1604 - 1529
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  1604 ttttggtggtggcgggggttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 12700406 - 12700481
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||| ||||||| |||| ||||    
T  12700406 ttttggtggtggccggggttcaaaccctagaccttgcatat-attatgcattgttcataccaactgaactaagctca 12700481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 34828370 - 34828307
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||| | |||||| |||||||||||||||||| |||| |||||||||||||||||    
T  34828370 cggggttcgaacctcagaccttacatattattatgcattgtccataccaactgagctaaactca 34828307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 9111110 - 9111048
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||| ||||||| |||| ||||    
T  9111110 cggggttcgaaccccggaccttgcatat-attatgcattgttcataccaactgaactaagctca 9111048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 6018644 - 6018718
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  6018644 ttttggtggtgtccggggttcgaacccacgaccttgcatatatttatacattgtctatatcaactgagctaaact 6018718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 24269960 - 24269884
Alignment:
Q  305 ttttggtggtggcgggg--ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||||||||  ||||||||||  |||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  24269960 ttttggtggtggcgggggattcaaaccccgaaccttgcatatt-ttatgcattgtccatactaactgagctaagctca 24269884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 33975993 - 33975927
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||| |||||| ||| |  |||||  ||||||||||||| |||||||||||||||||||||||    
T  33975993 cggggttcgaaccccggacttgacatatatttatgcattgttcctatcaactgagctaaactcatga 33975927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 655729 - 655809
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||| ||||| ||||||| |||||| ||||||||||| |||||||||||||  ||| |||||||||||| ||||    
T  655729 tttttttttggtagtggccggggttcgaaccccggaccttgcata-tattatgcattgtcgataccaactgagctaagctca 655809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 13496197 - 13496117
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||| |||||||  ||| || |||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  13496197 tttttttttggtgttggtcggggtttgaactccggaccttgcatat-attatgcattgttcatatcaactgagttaagctca 13496117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 24623297 - 24623377
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||||||  ||||||  ||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  24623297 ttttgttttagtggtggtcggggtttgaaccccgaaccttacatat-attatgcattgtccatatcaactgagctaaactca 24623377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 247379 - 247343
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  247379 ttatgcattgttcctatcaactgagctaaactcatga 247343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 4494852 - 4494931
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| |||||| || ||| ||||| ||||||| ||||||||||| |||| |||||||||||| ||||    
T  4494852 ttttttttttgtggtggccgggttcgaatcccagacctcgcatatt-ttatgcattgtccataccaactgagctaagctca 4494931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 9392666 - 9392728
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||| ||||| | |||||||||||| |||||||||| |||||| |||||||||||| ||||    
T  9392666 cggggtttaaacctcggaccttgcatat-attatgcatttttcataacaactgagctaagctca 9392728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 375
Target Start/End: Original strand, 14036299 - 14036334
Alignment:
Q  340 catattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||||||||||||||| ||||||||||||    
T  14036299 catattattatgcattgttcataccaactgagctaa 14036334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 20744201 - 20744139
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  20744201 cggggtttgaaccccagaccttgcatat-attatgcattgtccataccaactgagctaagctca 20744139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 26400927 - 26400865
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| |||| ||| |||||||| ||||    
T  26400927 cggggttcaaaccccggaccttgcata-tattatgtattgtccataccaattgagctaagctca 26400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 2445374 - 2445309
Alignment:
Q  306 tttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||||| |||||||| ||||||  | |||| |||| ||||||||||||||||||||||||||    
T  2445374 tttggtggtggtcggggttcgaaccccgaatcttgtatat-attatgcattgttcatatcaactgag 2445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 2726415 - 2726468
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||||||| |||||| ||||||||||| ||||||||||||| |||| ||||||||    
T  2726415 cggggttcgaaccccggaccttgcata-tattatgcattgtccataccaactgag 2726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 376
Target Start/End: Original strand, 8138465 - 8138514
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaa 376  Q
    |||||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  8138465 aaccccagaccttacatat-attatgcattgttcttatcaactgagctaaa 8138514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 12904332 - 12904377
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  12904332 accttgcatat-attatgcattgttcatatcaactgaggtaagctca 12904377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 14350995 - 14350950
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  14350995 accttgtatatt-ttatgcattgttcatatcaactgagttaaactca 14350950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 19988885 - 19988827
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  19988885 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 19988827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 32193874 - 32193919
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||    
T  32193874 accttgcatat-attatgcattgttcttaccaactgagctaaactca 32193919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 33938694 - 33938739
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  33938694 accttgcatat-attatgcattgttcataccaactgagctaagctca 33938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 33824935 - 33824887
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||||||||||| |||||||||||| | |||||||||||||||    
T  33824935 aaccccggaccttgcatat-attatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 1918443 - 1918530
Alignment:
Q  305 ttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaactttta 392  Q
    ||||||||||||| |  |||| |||| | |||||||||||| ||||||||||||  ||| |||||||| |||||||| || ||||||||    
T  1918443 ttttggtggtggctgatgttcgaacctcggaccttgcatat-attatgcattgtctataccaactgagttaaactcacgagaactttta 1918530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 7541095 - 7541039
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  7541095 gggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 7541039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 8569785 - 8569710
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| ||| |||| ||||||||    
T  8569785 tttttgtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaattgagttaaactca 8569710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 12582570 - 12582606
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  12582570 ttatgcattgttcctatcaactgaactaaactcatga 12582606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 16204797 - 16204848
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||| |||||||||||  |||||||||||| ||||||||| ||||||||||    
T  16204797 aaccccggaccttgcatac-attatgcattgtccatatcaaccgagctaaact 16204848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 20720789 - 20720848
Alignment:
Q  327 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    ||||| |||||| ||||| |||||||||||| |||| |||||||||||| |||| ||||||    
T  20720789 accccggaccttacatat-attatgcattgtccataacaactgagctaagctcacgaaaac 20720848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 34319107 - 34319071
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  34319107 ttatgcattgttcctatcatctgagctaaactcatga 34319071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 25385127 - 25385052
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    ||||||||||||| ||||||||||||   |||||||||||| |||||||||||||||| ||| |||| |||||||||    
T  25385127 ttttggtggtggctgggttcaaaccctgaaccttgcatatt-ttatgcattgttcataccaattgagttaaactcat 25385052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 26655540 - 26655458
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    ||||||||||||| ||||||| |||||| |||||| ||||| |||||||||||| |||| |||||||||| | |||||||||||    
T  26655540 ttttggtggtggccggggttcgaaccccggaccttacatat-attatgcattgtccataccaactgagctgagctcatgaaaac 26655458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 26927125 - 26927043
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    ||||||||||||| ||||||| |||||| |||||| ||||| |||||||||||| |||| |||||||||| | |||||||||||    
T  26927125 ttttggtggtggccggggttcgaaccccggaccttacatat-attatgcattgtccataccaactgagctgagctcatgaaaac 26927043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 16166373 - 16166431
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  16166373 cggggttcaaacccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 16166431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 5150065 - 5150146
Alignment:
Q  303 tcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||| | |||||||| |||||| |||||| |||||||||||||||||| ||||  ||||||| ||| |||||||    
T  5150065 tcttttggtggttgtcggggttcgaaccccagaccttacatattattatgcattgtccatactaactgaggtaacctcatga 5150146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 6624852 - 6624777
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||| |||||| |||||||||||| |||||||||||| |||  |||||||||||| ||||    
T  6624852 ttttggtggtggccggggttcgaaccccggaccttgcatat-attatgcattgtccatgccaactgagctaagctca 6624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 31561329 - 31561404
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| |||| |||||||| ||| ||||    
T  31561329 ttttggtagtggtcggggttcaaacccg-gaccttgcatattattatgcattgtccataccaactgagttaagctca 31561404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 18489074 - 18489136
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| || |||||||||||| ||||||||||||  ||| |||||||||||||||||    
T  18489074 cggggttcaaactccagaccttgcatat-attatgcattgtctataccaactgagctaaactca 18489136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 18589853 - 18589927
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||   ||||| ||||||| |||||||||||| ||||||||||||||||| |||||||| ||| ||||    
T  18589853 ttttggtggtgatcgggtttaaaccccggaccttgcatat-attatgcattgttcataccaactgagttaagctca 18589927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 22522781 - 22522861
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| |||| ||||||| ||||    
T  22522781 tttttttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaaccgagctaagctca 22522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 315 - 380
Target Start/End: Complemental strand, 26409318 - 26409254
Alignment:
Q  315 ggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||| |||||| |||||| ||||| |||||||||||| |||| |||||||||||| ||||    
T  26409318 ggcggggttcgaaccccggaccttacatat-attatgcattgtccataccaactgagctaagctca 26409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 320 - 377
Target Start/End: Original strand, 27479631 - 27479688
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaac 377  Q
    ||||| |||||| |||||||||||||||||| |||||| | ||||||||||| |||||    
T  27479631 ggttcgaaccccagaccttgcatattattatacattgtacttatcaactgagttaaac 27479688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 34436932 - 34436852
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||| |||||||  |||||| | |||||||||| |||||||||||| | || |||||||||||| ||||    
T  34436932 ttttcttttggtggtgggcggggtttgaaccccggcccttgcatat-attatgcattgtccctaccaactgagctaagctca 34436852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 37932391 - 37932331
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  37932391 gggttcgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctca 37932331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 6489083 - 6489008
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  6489083 ttttggtggtggccggggtttgaaccccagaccttgcatat-attatgcattgtccctaccaactgagctaagctca 6489008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 375
Target Start/End: Complemental strand, 12190073 - 12189998
Alignment:
Q  299 attttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||| |||| ||||||||||||||  ||||||||||||| |||| ||||||| ||||| |||| ||||| ||||||    
T  12190073 attttttttttgtggtggcggggtttgaacccccgaccttacata-tattatgtattgtccataccaactaagctaa 12189998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 31708147 - 31708198
Alignment:
Q  320 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagc 372  Q
    ||||| |||||| |||||||||||| ||||||||||||||||| |||||||||    
T  31708147 ggttcgaaccccagaccttgcatat-attatgcattgttcataccaactgagc 31708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 37461831 - 37461795
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37461831 ttatgcattgttcctatcaactgagctaaactcatga 37461795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 40715934 - 40716009
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||||||| |||||||| ||||    
T  40715934 tttttgtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccatatcaattgagctaagctca 40716009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 2530087 - 2530016
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| | ||||||| ||||  |||||||||||||  |||||||||||  ||||||||||||||||    
T  2530087 ttttggtggtgtccggggttcgaacctgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 2530016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 5614845 - 5614775
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||| |||| ||||||| ||||||  ||||||||||||| |||| ||||||||||| | |||||||||||||    
T  5614845 ttttttttttgtggtggtggggtttgaacccccgaccttacata-tattatgcattatccatatcaactgag 5614775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 383
Target Start/End: Complemental strand, 13351489 - 13351454
Alignment:
Q  348 tatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||| |||||||||||||||||||||||    
T  13351489 tatgcattgttcctatcaactgagctaaactcatga 13351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 384
Target Start/End: Complemental strand, 18147754 - 18147715
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaactcatgaa 384  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  18147754 tattatgcattgtccttatcaactgagctaaactcatgaa 18147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 32283627 - 32283580
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||||||||||||||| |||| |||||||||||| ||||    
T  32283627 gaccttacatattattatgcattgtccataccaactgagctaagctca 32283580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 33584120 - 33584085
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||||||||||||||||||||||||||    
T  33584120 tattatacattgttcatatcaactgagctaaactca 33584085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 7713578 - 7713533
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  7713578 accttgcatat-attatgcattattcatatcaactgagttaaactca 7713533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 8314817 - 8314759
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||  |||||||||||||  |||| ||||||| ||||||||||||||||    
T  8314817 cggggttcgaacctacgaccttgcatatatttatacattgtttatatcaactgagctaa 8314759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 10704338 - 10704391
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  10704338 aaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 10704391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 27903159 - 27903114
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  27903159 accttgcatat-attatgcattgttcataccaactgaactaaactca 27903114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 37147053 - 37146999
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||||||| ||||| |||||||||||||  |||| ||||||| ||||||||||||    
T  37147053 cggggttcgaacccgcgaccttgcatatatttatacattgtttatatcaactgag 37146999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 42111894 - 42111952
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  42111894 cggggttcgaacccgcgaccttgcatatatttatacattgtcaatatcaactgagctaa 42111952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 1488409 - 1488364
Alignment:
Q  336 cttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||    
T  1488409 cttgcatatttttatgcattgtccataccaactgagctaagctcat 1488364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 13409586 - 13409553
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||||||| ||||||||||||||||||    
T  13409586 tattatgcattgttcttatcaactgagctaaact 13409553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 13796383 - 13796331
Alignment:
Q  327 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||| ||| ||||    
T  13796383 accccagaccttgcatat-attatgcattgttcatatcgactgagttaagctca 13796331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 13864425 - 13864345
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||||||  |||||| ||||||||||| ||||||| |||||||||| |||||||| ||| ||||    
T  13864425 ttttttttttgtggtggtcggggtttgaaccccggaccttgcata-tattatgtattgttcataccaactgagttaagctca 13864345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 25603980 - 25604060
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||| ||||||| ||| ||| ||||||  ||||||||||| |||||||| ||| ||||||||||||||||| ||||    
T  25603980 tttttttttgttggtggccgggattcgaaccccgaaccttgcatat-attatgcactgtccatatcaactgagctaagctca 25604060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 28207213 - 28207133
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||| ||| |||| | ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  28207213 ttttttttttgtggtggccgggattcgaacctcggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 28207133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 31602840 - 31602880
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||||||| ||||||||||||||||| ||||||||||||    
T  31602840 accttgcatat-attatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 9893651 - 9893726
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||| |||||||| ||||||  |||||| ||||||||||||| ||||||||| |  ||||||||||||||||    
T  9893651 ttttttttttgtggtggctggggtttgaaccccagaccttgcatatt-ttatgcattatctatatcaactgagctaa 9893726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 15889487 - 15889412
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||  |||||  |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  15889487 ttttggtggtggtcggggtttgaaccctagaccttgcatat-attatgcattgtccctaccaactgagctaagctca 15889412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 24636627 - 24636703
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| |||| |||||||| ||||||  |||| | ||||||||||||| ||||||||||| ||||  |||||||||||    
T  24636627 ttttgtttttgtggtggctggggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaa 24636703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 29382669 - 29382721
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  29382669 aacccgcgaccttgcatatatttatacattgtctatatcaactgagctaaact 29382721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 32339816 - 32339757
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttc 359  Q
    |||| ||||||||||||| ||| ||| |||||| ||||||||||| |||||||||||||||    
T  32339816 tttttttttggtggtggccgggattcgaaccccggaccttgcata-tattatgcattgttc 32339757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 39980584 - 39980509
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||  ||| || ||||||||||||| ||||||||| | |||| |||||||||||| ||||    
T  39980584 ttttggtggtggtcggggtttgaactccggaccttgcatatt-ttatgcattatccataccaactgagctaagctca 39980509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 40782432 - 40782357
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||||||||| |||||| |||| ||||||| ||||||| |||  |||||| ||| ||||    
T  40782432 ttttggtggtggtcggggttcaaacccctgaccttacata-tattatgtattgttcctattgactgagttaagctca 40782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 21506740 - 21506818
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  21506740 tttttttttggtgg-gccggggttcaaaccccagaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 21506818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 52904130 - 52904203
Alignment:
Q  306 tttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||||||||| | || |||||||||||| ||||    
T  52904130 tttggtggtggcggggtttgaacccccgacattgcata-tattatgcattgtccttaccaactgagctaacctca 52904203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 380
Target Start/End: Original strand, 20370261 - 20370341
Alignment:
Q  299 attttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||| |||||||| |||||| |||||   |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  20370261 attttttttttgtggtggctgggttcgaaccctaaaccttgcatatt-ttatgcattgtccatatcaactgagctaagctca 20370341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 44582801 - 44582732
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagct 373  Q
    |||| |||||||| ||||||| |||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  44582801 tttttgtggtggccggggttcgaaccccggaccttgcatattattatgcattgcccataccaactgagct 44582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 47313351 - 47313432
Alignment:
Q  300 ttttcttttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| | |||||||| |||  |||||||||||||||||||||||| |||| |||||||||||| ||||    
T  47313351 ttttttttttgtggtggccgaggttcaaatcccgaaccttgcatattattatgcattgtccataccaactgagctaagctca 47313432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 25340909 - 25340984
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  25340909 ttttggtggtggccggggtttgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 25340984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 52576028 - 52575953
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||| ||| |||||||| |||| ||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  52576028 ttttttttcggtggtggtcgggattcgaaccccagaccttgcatatt-ttatgcattgttcataccaactgagctaa 52575953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 28244102 - 28244164
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||| |||||||| ||| ||||    
T  28244102 cggggttcgaaccccggaccttgcatatt-ttatgcattgttcataccaactgagttaagctca 28244164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 44579699 - 44579637
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  44579699 cggggttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 44579637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 51505919 - 51505873
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  51505919 accttgcatatt-ttatgcattgtccatatcaactgagctaaactcat 51505873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 25441478 - 25441555
Alignment:
Q  298 tattttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| ||||||||||||    
T  25441478 tattttttttttgtggtggccggggtttgaaccccagaccttgcatat-attatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 14827606 - 14827526
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| |||||| ||||||| || |||||||||| ||||||||||| |||| |||||||||||| ||||    
T  14827606 ttttttttttgtggtggccggggtttaaaccccggatcttgcatatt-ttatgcattgtccataccaactgagctaagctca 14827526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 38130939 - 38131019
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  38130939 tttttttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagttaagctca 38131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 38894091 - 38894043
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  38894091 aaccccggaccttgcatatt-ttatacattgttcatatcaactgagctaa 38894043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 53996380 - 53996300
Alignment:
Q  300 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| |||||||| ||| ||| |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  53996380 ttttttttttgtggtggccgggattcgaaccccagaccttgcatat-attatgcattgtccataccaactgagctaagctca 53996300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 916237 - 916201
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||||||||||    
T  916237 ttatgcattgttcctatcaactgagctaaactcatga 916201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 380
Target Start/End: Complemental strand, 5030246 - 5030206
Alignment:
Q  340 catattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  5030246 catattattatgcattgttcataccaactgaactaaactca 5030206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 381
Target Start/End: Original strand, 54230097 - 54230160
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcat 381  Q
    |||||||| ||||||  ||||||||||| |||||||||||| | || ||||||||||||||||||    
T  54230097 cggggttcgaaccccaaaccttgcatat-attatgcattgtccttaccaactgagctaaactcat 54230160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 21160132 - 21160062
Alignment:
Q  300 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 371  Q
    |||| |||| ||||||| ||||||  ||||||||||||| |||| ||||||||||| | |||||||||||||    
T  21160132 ttttttttttgtggtggtggggtttgaacccccgaccttacata-tattatgcattatccatatcaactgag 21160062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 29631262 - 29631184
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| ||||||  || |||  ||||||||||| |||||||||||| |||| |||||||||||| |||||||    
T  29631262 ttttggtggtggccggggtttgaatcccgaaccttgcatat-attatgcattgtccataccaactgagctaagctcatga 29631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 380
Target Start/End: Complemental strand, 32629139 - 32629081
Alignment:
Q  321 gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  32629139 gttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 32629081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 375
Target Start/End: Complemental strand, 40862220 - 40862177
Alignment:
Q  332 cgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||    
T  40862220 cgaccttacatattattatacattgttcataacaactgagctaa 40862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 43345021 - 43345067
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||    
T  43345021 gaccttgcatat-attatgtattgttcataccaactgagctaaactca 43345067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 43490431 - 43490477
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  43490431 gaccttgcatat-attatgcattgttcataccaactgagctaagctca 43490477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 4216409 - 4216454
Alignment:
Q  329 ccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||    
T  4216409 ccccgaccttgcatat-attatgcattgtccttatcaactgagctaa 4216454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 25874185 - 25874131
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||| |||||||||||||||||| |||| |||||||| ||| ||||    
T  25874185 aaccccggaccttacatattattatgcattgtccataccaactgagttaagctca 25874131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 33745153 - 33745100
Alignment:
Q  326 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  33745153 aaccccagaccttgcatatt-ttatgcattgtccatatcaattgagctaagctca 33745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 46090201 - 46090259
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||| | |||||||||||||  |||||||||||  ||||||||||||||||    
T  46090201 cggggttcgaactcgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 46090259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 48961111 - 48961053
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||| ||||||||  |||||||||||  ||||||||||||||||    
T  48961111 cggggttcgaacccgcgactttgcatatatttatgcattgtctatatcaactgagctaa 48961053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 49088798 - 49088753
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  49088798 accttacatatt-ttatgcattgtttatatcaactgagctaaactca 49088753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 51379798 - 51379839
Alignment:
Q  338 tgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  51379798 tgcatatt-ttatgcattgttcatatcaactgaggtaaactca 51379839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 4947811 - 4947887
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgca-ttgttcatatcaactgagctaaactca 380  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| ||||||| |||||| || ||||| |||||||||||    
T  4947811 tttttgtggtggtcggggttcaaaccccagaccttacatatt-ttatgcatttgttcctaccaactaagctaaactca 4947887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 7827589 - 7827509
Alignment:
Q  300 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||| ||||||| |||| ||| ||| || |||||| ||||| |||||||||||| ||||||||||||| ||||||||    
T  7827589 ttttttttttgtggtggtcgggtttcgaactccagaccttacatat-attatgcattgtccatatcaactgagttaaactca 7827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 10617615 - 10617554
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| |||||| ||||||| ||||  ||||||||| | ||||||||||||||||| ||||    
T  10617615 gggttcgaaccccagaccttgtatatatttatgcattatccatatcaactgagctaagctca 10617554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 13337091 - 13337034
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  13337091 ggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 13337034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 25505687 - 25505763
Alignment:
Q  305 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 382  Q
    ||||||||||| | |||||| |||||| ||||||||||| ||||||||||||| | ||  ||||||| ||| ||||||    
T  25505687 ttttggtggtgtccgggttcgaaccccagaccttgcata-tattatgcattgtccttacaaactgagttaagctcatg 25505763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 35191816 - 35191872
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| |||||| ||||||||||| ||||||||||||| | || ||||||||||||    
T  35191816 ggggttcgaaccccagaccttgcata-tattatgcattgtccttaccaactgagctaa 35191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 39100098 - 39100142
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||    
T  39100098 gaccttgcatat-attatgcattgtttataacaactgagctaaact 39100142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 380
Target Start/End: Original strand, 43316600 - 43316661
Alignment:
Q  319 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||| ||||| |||||||||||||  ||||||||| |  |||||||||||||||| ||||    
T  43316600 gggttcgaacccgcgaccttgcatatatttatgcattatctatatcaactgagctaagctca 43316661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 45096088 - 45096032
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| |||| | |||||||||||| |||||||||||| | |||||||||||||||    
T  45096088 ggggttcgaaccacagaccttgcatat-attatgcattgtccttatcaactgagctaa 45096032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 50739145 - 50739088
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| ||||| |||||||||||||  |||||||||||  ||||||| ||||||||    
T  50739145 ggggttcgaacccgcgaccttgcatatatttatgcattgtctatatcaaatgagctaa 50739088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 50773710 - 50773767
Alignment:
Q  318 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    ||||||| ||||| |||||||||||||  |||||||||||  ||||||| ||||||||    
T  50773710 ggggttcgaacccgcgaccttgcatatatttatgcattgtctatatcaaatgagctaa 50773767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 51402738 - 51402771
Alignment:
Q  345 tattatgcattgttcatatcaactgagctaaact 378  Q
    ||||||||||||| ||||||||||||||||||||    
T  51402738 tattatgcattgtccatatcaactgagctaaact 51402771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 7824883 - 7824808
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||| ||| ||| || |||||||||||| |||||| |||||  |||||||||||| ||||||||    
T  7824883 ttttggtggtggtcgggtttcgaactccagaccttgcatat-attatgtattgtctatatcaactgagttaaactca 7824808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 22722478 - 22722403
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||| |||||||  |||| | ||||||||||||| ||||||||||||||||  ||||||||||| ||||    
T  22722478 tttttgtggtggtcggggtttgaacctcggaccttgcatatt-ttatgcattgttcatactaactgagctaagctca 22722403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 28266800 - 28266714
Alignment:
Q  295 atatattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||| ||||| ||||| | |||| | |||||| |||||||||||| |||||||||||| | || ||||||| |||| |||||||    
T  28266800 atatatttttttttg-tggtgtccgggtacgaaccccggaccttgcatat-attatgcattgtccttaccaactgaactaacctcatga 28266714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 38911206 - 38911170
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  38911206 ttatgcattgtttatatcaattgagctaaactcatga 38911170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 44075497 - 44075533
Alignment:
Q  347 ttatgcattgttcatatcaactgagctaaactcatga 383  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  44075497 ttatgcattgttcctatcaactgagctaaagtcatga 44075533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 5489 - 5416
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 378  Q
    |||||||||||| ||||| || |||||| ||||||||||||| ||||||||||| |||| |||| ||||||||||    
T  5489 ttttggtggtggtcggggatcgaaccccagaccttgcatatt-ttatgcattgtccataccaaccgagctaaact 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 37611 - 37536
Alignment:
Q  305 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| ||||||| ||| ||| |||||| ||||||||||||| |||||||||||||||| ||||| |||||| ||||    
T  37611 ttttgatggtggccgggattcgaaccccggaccttgcatatt-ttatgcattgttcataccaacttagctaagctca 37536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 7062 - 6980
Alignment:
Q  299 attttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||| |||||||| ||| ||| |||||| |||||| |||||||||||||||||| |||| |||| |||  |||||||    
T  7062 attttttttttgtggtggccgggattcgaaccccagaccttacatattattatgcattgtccataccaaccgagtcaaactca 6980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 14201 - 14246
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  14201 accttgcatat-attatgcattgttcataccaactgagttaaactca 14246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 47255 - 47308
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 387  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| |||| ||||||    
T  47255 gaccttgcatatt-ttatgcattgtccataccaactgagctaagctcacgaaaac 47308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 138112 - 138170
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 375  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  138112 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 138170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 371
Target Start/End: Original strand, 189604 - 189642
Alignment:
Q  333 gaccttgcatattattatgcattgttcatatcaactgag 371  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  189604 gaccttgcatattattatgcattgtccataccaactgag 189642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 244526 - 244480
Alignment:
Q  334 accttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    ||||| |||||| ||||||||||| ||||||||||||||||| ||||    
T  244526 accttacatatttttatgcattgtccatatcaactgagctaagctca 244480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 17812 - 17733
Alignment:
Q  300 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| ||||||||||||| ||||||  |||||  |||||||||| | |||||||||||| |||| |||||||||||||||||    
T  17812 tttttttttggtggtggctggggtttgaacccg-gaccttgcatgt-attatgcattgtccataccaactgagctaaactca 17733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 11136 - 11212
Alignment:
Q  305 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||| |||||||| ||||||  || ||| ||||||||||||| ||||||||||| |||| ||||||| |||| ||||    
T  11136 tttttgtggtggccggggtttgaatcccagaccttgcatatttttatgcattgtccataccaactgatctaagctca 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 14814 - 14853
Alignment:
Q  317 cggggttcaaacccccgaccttgcatattattatgcattgt 357  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  14814 cggggttcaaaccccggaccttgcatatt-ttatgcattgt 14853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 161217 - 161142
Alignment:
Q  305 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 380  Q
    |||||||||||| |||||||  ||||||  |||||||||||| ||||||||||| |||| |||||||| ||| ||||    
T  161217 ttttggtggtggtcggggtttgaaccccgaaccttgcatatt-ttatgcattgtccataccaactgagttaagctca 161142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University