View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18893_high_2 (Length: 736)

Name: NF18893_high_2
Description: NF18893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18893_high_2
NF18893_high_2
[»] chr4 (16 HSPs)
chr4 (1-736)||(24627361-24628103)
chr4 (267-512)||(5576757-5576996)
chr4 (267-462)||(1506879-1507074)
chr4 (641-735)||(1505343-1505437)
chr4 (641-735)||(13701961-13702055)
chr4 (641-735)||(13712454-13712548)
chr4 (641-735)||(6735729-6735823)
chr4 (655-735)||(1604700-1604780)
chr4 (665-736)||(5599254-5599325)
chr4 (650-735)||(2895140-2895225)
chr4 (650-735)||(5908501-5908586)
chr4 (224-402)||(14191385-14191563)
chr4 (646-714)||(31663869-31663937)
chr4 (689-736)||(3329498-3329545)
chr4 (650-735)||(4852044-4852129)
chr4 (656-717)||(5579109-5579170)
[»] scaffold0043 (2 HSPs)
scaffold0043 (268-461)||(69035-69229)
scaffold0043 (665-735)||(70138-70208)
[»] chr3 (15 HSPs)
chr3 (267-526)||(14529835-14530092)
chr3 (276-461)||(2746088-2746274)
chr3 (289-461)||(5836160-5836333)
chr3 (641-735)||(2747061-2747155)
chr3 (641-735)||(18111095-18111189)
chr3 (641-735)||(5835280-5835374)
chr3 (641-735)||(28034342-28034436)
chr3 (307-376)||(5940020-5940089)
chr3 (655-735)||(19440719-19440799)
chr3 (646-735)||(37489378-37489467)
chr3 (641-735)||(5938389-5938483)
chr3 (655-733)||(19359870-19359948)
chr3 (655-734)||(27170130-27170209)
chr3 (650-736)||(14521644-14521730)
chr3 (650-735)||(7782837-7782922)
[»] chr6 (10 HSPs)
chr6 (267-462)||(5130142-5130337)
chr6 (267-434)||(26619544-26619711)
chr6 (267-434)||(26725457-26725624)
chr6 (641-735)||(5131326-5131420)
chr6 (641-735)||(31113617-31113711)
chr6 (303-392)||(9485959-9486048)
chr6 (646-735)||(6406210-6406292)
chr6 (665-736)||(33301138-33301209)
chr6 (650-733)||(34256188-34256271)
chr6 (650-736)||(28144392-28144478)
[»] chr2 (10 HSPs)
chr2 (249-464)||(20112445-20112658)
chr2 (646-736)||(31347376-31347466)
chr2 (641-730)||(31314654-31314743)
chr2 (396-501)||(3811479-3811584)
chr2 (651-736)||(38211351-38211436)
chr2 (659-731)||(17863237-17863309)
chr2 (650-714)||(29742307-29742371)
chr2 (657-735)||(18010915-18010992)
chr2 (655-735)||(29747149-29747229)
chr2 (694-735)||(33125425-33125466)
[»] chr8 (9 HSPs)
chr8 (224-511)||(20809571-20809851)
chr8 (307-392)||(25337030-25337115)
chr8 (641-733)||(25336131-25336223)
chr8 (650-735)||(20811015-20811100)
chr8 (655-735)||(4844424-4844504)
chr8 (656-734)||(3166424-3166502)
chr8 (655-733)||(5557130-5557208)
chr8 (669-735)||(25004005-25004071)
chr8 (306-391)||(17275850-17275935)
[»] chr1 (12 HSPs)
chr1 (641-733)||(51843949-51844041)
chr1 (646-735)||(15088265-15088354)
chr1 (646-735)||(22210873-22210962)
chr1 (655-736)||(14150123-14150204)
chr1 (646-735)||(22219623-22219712)
chr1 (659-735)||(1991595-1991671)
chr1 (641-735)||(7898994-7899088)
chr1 (650-735)||(14115539-14115624)
chr1 (646-735)||(22207310-22207399)
chr1 (303-461)||(9392590-9392748)
chr1 (641-735)||(44193448-44193542)
chr1 (676-736)||(7064032-7064092)
[»] scaffold0046 (1 HSPs)
scaffold0046 (641-735)||(89844-89938)
[»] chr7 (8 HSPs)
chr7 (650-736)||(19802251-19802337)
chr7 (650-735)||(21959205-21959290)
chr7 (668-735)||(3737876-3737943)
chr7 (650-735)||(42786498-42786583)
chr7 (650-735)||(48477403-48477488)
chr7 (669-736)||(20920353-20920420)
chr7 (646-735)||(3079019-3079108)
chr7 (665-734)||(4340549-4340618)
[»] scaffold0158 (1 HSPs)
scaffold0158 (665-736)||(1-72)
[»] chr5 (3 HSPs)
chr5 (655-733)||(41527884-41527962)
chr5 (317-433)||(17302873-17302990)
chr5 (655-736)||(22301886-22301967)
[»] scaffold0024 (1 HSPs)
scaffold0024 (665-734)||(63473-63542)


Alignment Details
Target: chr4 (Bit Score: 663; Significance: 0; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 663; E-Value: 0
Query Start/End: Original strand, 1 - 736
Target Start/End: Complemental strand, 24628103 - 24627361
Alignment:
Q  1 taaggtttgtcattaagttaactgcacgtgtaaattaagttgaagtaagaaaaatagaaactatgttatgaatgatgaatttgatgttggtgaaaattgg 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24628103 taaggtttgtcattaagttaactgcatgtgtaaattaagttgaagtaagaaaaa-agaaactatgttatgaatgatgaatttgatgttggtgaaaattgg 24628005  T
Q  101 atgaaatatttatctcagcaccataaaagggaccgttgttgtagtgttacggactggtgttttgttcaaattgattgctattgttagtttggttagggtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24628004 atgaaatatttatctcagcaccataaaagggaccgttgttgtagtgttacggactggtgttttgttcaaattgattgctattgttagtttggttagggtt 24627905  T
Q  201 gaattttatcggatgttggttagaaattcgtatagcatatttgtggtgtttttgtcatagttttggctgtgtaatctggaatttagtgattatcgaagtt 300  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24627904 gaattttatcggatgttggttagaaattcgtatggcatatttgtggtgtttttgtcatagttttggctgtgtaatctggaatttagtgattatcgaagtt 24627805  T
Q  301 tcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatg 400  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24627804 tcggattctacacttaattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatg 24627705  T
Q  401 cttgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaagatggttataaatgattccaggattgattatggatgccc 500  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24627704 cttgaaattacttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaagatggttataaatgattccaggattgattatggatgccc 24627605  T
Q  501 acatggttgagcaagagtttggttgaaatcaggacgtaaaagttagaggcagaatcaataagctgaaataagctgttttggagaaatagcggtcttagtt 600  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24627604 acatggttgagcaagagtttggttgaaatcaggacgtaaaagttagaggcggaatcaataagctgaaataagctgttttggagaaatagtggtcttagtt 24627505  T
Q  601 ttcccctgatcgc--------gcagataagaacgatataaacccaaaatgagattagaacatatggcgattataggttccctgagattgcttacacccta 692  Q
    |||||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  24627504 ttcccctgatcgctctgttatgcagataagaacaatataaacccaaaatgagattagaacatatggcgatcataggttccctgagattgcctacatccta 24627405  T
Q  693 tgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  24627404 ggataggtggaactcgctgagacatcatgtgtcaccccaatcct 24627361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 267 - 512
Target Start/End: Original strand, 5576757 - 5576996
Alignment:
Q  267 ctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaa 366  Q
    ||||||||||||||||| ||| ||| | |||||||||||||||||||||  ||||||| |||||| |||     |||| ||| ||||||||| ||||  |    
T  5576757 ctgtgtaatctggaattaagtaattgttgaagtttcggattctacacttatttcccttcagtttgaatac----tttgcatgattcggattaagaatgga 5576852  T
Q  367 ttcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaagatgg 466  Q
     ||||||||| ||||||||||||||||||| |||| ||||| ||  |||||||||||  |||||||||||   |||||||| |  ||||||| ||  |||    
T  5576853 ctcagaaaacgcatttaaagtttggaaattcatgc-tgaaaatggctacgggtttgatgtggatttttccgaaataagctacattgtgaattcaaattgg 5576951  T
Q  467 ttataaatgattccaggattgattatggatgcccacatggttgagc 512  Q
    |||||||||||| |||| || |||||||||||||  ||||||||||    
T  5576952 ttataaatgatttcagg-ttaattatggatgcccttatggttgagc 5576996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 267 - 462
Target Start/End: Complemental strand, 1507074 - 1506879
Alignment:
Q  267 ctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaa 366  Q
    ||||||||||||||||| ||| ||| | |||||||||||||||||||||  ||||||| |||| ||||||||  |||| ||| ||||||||| ||||  |    
T  1507074 ctgtgtaatctggaattaagtaattgttgaagtttcggattctacacttatttcccttcagttcggatataaactttgcatgattcggattaagaatgga 1506975  T
Q  367 ttcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaag 462  Q
     ||||||||| ||||||||||||| ||| || ||||  || || ||||| |||||||| | ||||||||    |||||||||||||||||| ||||    
T  1506974 ctcagaaaacgcatttaaagtttgtaaaattctgctgaaatttacttactggtttgacgtagatttttctgaaataagctaaaacgtgaatctaag 1506879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 1505437 - 1505343
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||| ||||||||  |||||||||||||||||| |||| |||| |||||||||||||| || ||||||| ||| ||||||||||||    
T  1505437 tgagtttagaacagatggcgatcctaggttccctgagattgcctacaacctaggataggtggaactcactaagacatcttgtctcaccccaatcc 1505343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 13702055 - 13701961
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||| ||||||||  |||||| ||||||||||| |||| |||| |||||||||||||| |||||||||| | | ||||||||||||    
T  13702055 tgagtttagaacagatggcgatcgtaggtttcctgagattgcgtacaacctaggataggtggaactcactgagacatcttatctcaccccaatcc 13701961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 13712548 - 13712454
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||| ||||||||  |||||| ||||||||||| |||| |||| |||||||||||||| |||||||||| | | ||||||||||||    
T  13712548 tgagtttagaacagatggcgatcgtaggtttcctgagattgcgtacaacctaggataggtggaactcactgagacatcttatctcaccccaatcc 13712454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 641 - 735
Target Start/End: Original strand, 6735729 - 6735823
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||| |||||||||||  |||||||||| ||||| | |||| | || |||||||||||||| |||||||||||||| ||| ||||||||    
T  6735729 tgagtttagagcatatggcgatcctaggttccctaagatttcctacagcttaggataggtggaactcactgagacatcatgtctcatcccaatcc 6735823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 735
Target Start/End: Original strand, 1604700 - 1604780
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    ||||||||||||||||||||||  | || |||| |||| |||||||||||||| ||||||| || ||| ||||||||||||    
T  1604700 atggcgattataggttccctgaagtcgcctacaacctaggataggtggaactcactgagacctcctgtctcaccccaatcc 1604780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 736
Target Start/End: Complemental strand, 5599325 - 5599254
Alignment:
Q  665 taggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    ||||||||||||| |||| |||| |||| ||||| |||||||| |||||||||| ||| |||||||||||||    
T  5599325 taggttccctgaggttgcctacaacctaggatagatggaactcactgagacatcttgtctcaccccaatcct 5599254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 735
Target Start/End: Original strand, 2895140 - 2895225
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||||| ||| |||| || | |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  2895140 aacagatggcgatcctaggttccccgaggttgcctatagcctaggataggtggaactcactgagacatcttgtctcaccccaatcc 2895225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 735
Target Start/End: Complemental strand, 5908586 - 5908501
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||||| ||| |||| || | |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  5908586 aacagatggcgatcctaggttccccgaggttgcctatagcctaggataggtggaactcactgagacatcttgtctcaccccaatcc 5908501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 224 - 402
Target Start/End: Complemental strand, 14191563 - 14191385
Alignment:
Q  224 aaattcgtatagcatatttgtggtgtttttgtcatagttttggctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccct 323  Q
    |||||||||||| |||| | |||| |||| ||||  || ||| |||||||| ||| |||| ||| ||| | ||||||| ||||| ||||||  |||||||    
T  14191563 aaattcgtatagaatatatctggtattttcgtcactgtgttgtctgtgtaacctgaaattgagtaattgttgaagttttggattgtacactcaattccct 14191464  T
Q  324 ttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatgct 402  Q
    | | || |||||||| |||  | |  |||||| ||||||| ||||| |||||||  ||| |||||||| ||||| ||||    
T  14191463 tcaattcggatataagtttcatgtaattcggaataggaatgaattcggaaaacatgtttgaagtttggtaatttctgct 14191385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 714
Target Start/End: Original strand, 31663869 - 31663937
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgaga 714  Q
    |||||||||||| |||| ||||||| | ||||||||  |||| |||| |||||||||||||| ||||||    
T  31663869 ttagaacatatgtcgatcataggtttcttgagattgtctacaacctaggataggtggaactcactgaga 31663937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 736
Target Start/End: Original strand, 3329498 - 3329545
Alignment:
Q  689 cctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||||||    
T  3329498 cctaagataggtggaactcactgagacatcttgtctcaccccaatcct 3329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 735
Target Start/End: Complemental strand, 4852129 - 4852044
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||||| ||| |||| |||| |||| ||||||||||||||  ||| ||||| ||| ||| ||||||||    
T  4852129 aacaaatggcgatcctaggttccccgaggttgcctacaacctaggataggtggaactcagtgaaacatcttgtctcatcccaatcc 4852044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 656 - 717
Target Start/End: Original strand, 5579109 - 5579170
Alignment:
Q  656 tggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacat 717  Q
    |||||||  ||||||||| |||||| | |||| ||||||||||||||||||| | |||||||    
T  5579109 tggcgatcctaggttccccgagatttcctacagcctatgataggtggaactcaccgagacat 5579170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 83; Significance: 6e-39; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 268 - 461
Target Start/End: Original strand, 69035 - 69229
Alignment:
Q  268 tgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaat 367  Q
    ||||| |||||||||| ||| ||||||| |||||| |||||||||||| |||| ||| ||||||||||||| |||||||||||| |||||||||||  ||    
T  69035 tgtgttatctggaattaagtaattatcggagtttcagattctacacttaattcacttcagtttggatataaattttgtatgttttggattaggaatggat 69134  T
Q  368 tcagaaaacacatttaaagtttggaaatttatgcttgaaa-ttgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaa 461  Q
    ||||||||| | ||| ||| |||||| ||||||||  ||| |||| |||||||||| | ||||||| |||   ||||||||||||||||||||||    
T  69135 tcagaaaacgcgtttgaaggttggaattttatgctgaaaatttgcctacgggtttggcttggatttgtccgaaataagctaaaacgtgaatttaa 69229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 735
Target Start/End: Original strand, 70138 - 70208
Alignment:
Q  665 taggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    ||||| |||||||||||| | || |||| |||||||||||||| |||||||||| ||| |||||| |||||    
T  70138 taggtaccctgagattgcctgcatcctaggataggtggaactcactgagacatcttgtctcacccgaatcc 70208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 4e-37; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 267 - 526
Target Start/End: Original strand, 14529835 - 14530092
Alignment:
Q  267 ctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaa 366  Q
    ||||||||||||||||| |||  || | |||||||||||||||||||||  ||||||| |||||| ||||||  |||| |||  |||||||| ||||  |    
T  14529835 ctgtgtaatctggaattaagtagttgttgaagtttcggattctacacttatttcccttcagtttgaatataaactttgcatgactcggattaagaatgga 14529934  T
Q  367 ttcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaagatgg 466  Q
     ||||||||||||||||||||||||||||| |||| ||||| ||  |||||||||||  |||||||||||   |||||||| || ||||||| ||  |||    
T  14529935 ctcagaaaacacatttaaagtttggaaattcatgc-tgaaaatggctacgggtttgatgtggatttttccgaaataagctacaatgtgaattcaaattgg 14530033  T
Q  467 ttataaatgattccaggattgattatggatgcccacatggttgagcaagagtttggttga 526  Q
    |||||||||||| |||| || ||||| ||||| |  ||||||||||| ||  ||||||||    
T  14530034 ttataaatgatttcagg-ttaattatagatgcacttatggttgagcatgaagttggttga 14530092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 276 - 461
Target Start/End: Original strand, 2746088 - 2746274
Alignment:
Q  276 ctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaa 375  Q
    |||||||| ||| ||||| | ||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||| |||||||||||  ||||||||||    
T  2746088 ctggaattaagtaattattggagtttcggattctacacttaattcacttcagtttggatataaattttgtatgttttggattaggaatggattcagaaaa 2746187  T
Q  376 cacatttaaagtttggaaatttatgcttgaaa-ttgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaa 461  Q
    | | ||| ||| |||||| ||||||||  ||| |||| |||||||||| | ||||||| |||   ||||||||||||||||||||||    
T  2746188 cgcgtttgaaggttggaattttatgctgaaaatttgcctacgggtttggcttggatttgtccgaaataagctaaaacgtgaatttaa 2746274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 5836333 - 5836160
Alignment:
Q  289 attatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtt 388  Q
    ||||| ||| ||| ||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||  ||| ||||||| | ||| |||||    
T  5836333 attattgaatttttggactctacacttaattcccttcagtttggatataaattttgtatgtttcggattaggaatggatttagaaaacgcgtttgaagtt 5836234  T
Q  389 tggaaatttatgct--tgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaa 461  Q
    ||| | ||||||||    ||||||| |||||||||| |  |||||||||    ||||||||||||||||||||||    
T  5836233 tgg-attttatgctgaaaaaattgcctacgggtttggccaggatttttctgtaataagctaaaacgtgaatttaa 5836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 641 - 735
Target Start/End: Original strand, 2747061 - 2747155
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||| |||||||||||||  |||||||||||||||||| |||| |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  2747061 tgagattaaaacatatggcgatcctaggttccctgagattgcctacaacctaggataggtggaactcactgagacatcctgtctcaccccaatcc 2747155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 18111189 - 18111095
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    ||||||||||||| ||||||||  |||||||||||| ||||| |||| |||| |||||||||||||| |||||||||||||| ||||||| ||||    
T  18111189 tgagattagaacagatggcgatcctaggttccctgatattgcctacaacctaggataggtggaactcactgagacatcatgtctcaccccgatcc 18111095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 5835374 - 5835280
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||||||| ||||  |||||||||||||||||| || | |||| |||||||||||||| |||||||||| | | ||||||||||||    
T  5835374 tgagtttagaacatatgacgatcctaggttccctgagattgcctatagcctaggataggtggaactcactgagacatcctatctcaccccaatcc 5835280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 28034436 - 28034342
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||||||||||||  |||||||| |||||||||  ||| |||| ||||||||||| || |||||||||| ||| ||||||||||||    
T  28034436 tgagtttagaacatatggcgatcctaggttccttgagattgccaacaacctaggataggtggaattcactgagacatcttgtctcaccccaatcc 28034342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 5940089 - 5940020
Alignment:
Q  307 tctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaac 376  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||  ||| |||||||    
T  5940089 tctacacttaattcccttcagtttggatataaattttgtatgtttcggattaggaatggatttagaaaac 5940020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 655 - 735
Target Start/End: Complemental strand, 19440799 - 19440719
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    ||||||||  |||||||| ||||||||| |||| |||| |||||||||||||| |||||||||||||| ||||| ||||||    
T  19440799 atggcgatcctaggttccttgagattgcctacagcctaggataggtggaactcactgagacatcatgtctcacctcaatcc 19440719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 735
Target Start/End: Complemental strand, 37489467 - 37489378
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||  ||||||||  |||||| ||||||||||| |||| |||| |||||||||||||| | |||||||| ||| ||||||||||||    
T  37489467 ttagaacggatggcgatcctaggtttcctgagattgcctacaacctaggataggtggaactcaccgagacatcttgtctcaccccaatcc 37489378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 5938483 - 5938389
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||||||||||||  ||  |||||||| ||||| || | |||| |||||||||||||| |||||||||| | | ||||||||||||    
T  5938483 tgagtttagaacatatggcgatcctaatttccctgaaattgcctatagcctaggataggtggaactcactgagacatcctatctcaccccaatcc 5938389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 733
Target Start/End: Original strand, 19359870 - 19359948
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaat 733  Q
    ||||||||  ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||    
T  19359870 atggcgatcctaggttccccgagattgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaat 19359948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 655 - 734
Target Start/End: Complemental strand, 27170209 - 27170130
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatc 734  Q
    |||| ||| |||||||||  |||||||| | || |||||||||| |||||||| |||||||||||||| ||||| |||||    
T  27170209 atggtgatcataggttcctagagattgccttcaacctatgatagatggaactcactgagacatcatgtctcacctcaatc 27170130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 736
Target Start/End: Original strand, 14521644 - 14521730
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||| ||||||||  ||| ||||| |||||||| |||| |||| |||||||||||||| || ||||||  ||| |||||||||||||    
T  14521644 aacagatggcgatcttagattccccgagattgcctacagcctaggataggtggaactcactaagacattttgtctcaccccaatcct 14521730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 735
Target Start/End: Complemental strand, 7782922 - 7782837
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||| ||| |||||||||| |||||||| || | | || |||||||||||||| || ||||||| ||| |||||| |||||    
T  7782922 aacaaatggtgatcataggttccccgagattgcctatagcttaggataggtggaactcactaagacatcgtgtctcaccctaatcc 7782837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 9e-35; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 267 - 462
Target Start/End: Original strand, 5130142 - 5130337
Alignment:
Q  267 ctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaa 366  Q
    ||||||||||||||||| ||| ||| | |||||||||||||||||||||  ||||||| |||| ||||||||  |||| ||| ||||||||| ||||  |    
T  5130142 ctgtgtaatctggaattaagtaattgttgaagtttcggattctacacttatttcccttcagttcggatataaactttgcatgattcggattaagaatgga 5130241  T
Q  367 ttcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaag 462  Q
     ||||| ||| ||||||||||||| ||| || ||||  || || |||||||||||||||| |||||||||   |||||||||||||||||| ||||    
T  5130242 ctcagagaacgcatttaaagtttgtaaaattctgctgaaatttacttacgggtttgacatagatttttccgaaataagctaaaacgtgaatctaag 5130337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 267 - 434
Target Start/End: Original strand, 26619544 - 26619711
Alignment:
Q  267 ctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaa 366  Q
    ||||||||||||||||| ||| ||| | ||||| |||||||||||||||  ||||||| |||| ||||||||  |||| ||| ||||||||| ||||  |    
T  26619544 ctgtgtaatctggaattaagtaattgttgaagtctcggattctacacttatttcccttcagttcggatataaactttgcatgattcggattaagaatgga 26619643  T
Q  367 ttcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggattttt 434  Q
     ||||||||| ||||||||||||| ||| || ||||  || || ||||||||||||| || |||||||    
T  26619644 ctcagaaaacgcatttaaagtttgtaaaattctgctgaaatttacttacgggtttgagatagattttt 26619711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 267 - 434
Target Start/End: Original strand, 26725457 - 26725624
Alignment:
Q  267 ctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaa 366  Q
    ||||||||||||||||| ||| ||| | ||||| |||||||||||||||  ||||||| |||| ||||||||  |||| ||| ||||||||| ||||  |    
T  26725457 ctgtgtaatctggaattaagtaattgttgaagtctcggattctacacttatttcccttcagttcggatataaactttgcatgattcggattaagaatgga 26725556  T
Q  367 ttcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggattttt 434  Q
     ||||||||| ||||||||||||| ||| || ||||  || || ||||||||||||| || |||||||    
T  26725557 ctcagaaaacgcatttaaagtttgtaaaattctgctgaaatttacttacgggtttgagatagattttt 26725624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 641 - 735
Target Start/End: Original strand, 5131326 - 5131420
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||| ||||||||  ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  5131326 tgagtttagaacagatggcgatcctaggttccccgagattgcctacaacctaggataggtggaactcactgagacatcttgtctcaccccaatcc 5131420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 641 - 735
Target Start/End: Original strand, 31113617 - 31113711
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||||||  |||  |||||||| ||||||||| |||| |||| |||||||||||||| |||||||||||||| ||||||||||||    
T  31113617 tgagtttagaacatatgttgatcctaggttccttgagattgcctacagcctaggataggtggaactcactgagacatcatgtctcaccccaatcc 31113711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 392
Target Start/End: Original strand, 9485959 - 9486048
Alignment:
Q  303 ggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttgga 392  Q
    ||||||||||||  |||| ||| ||||||||||||| ||||||||| | ||||| ||||| |||| |||||||  | ||| |||||||||    
T  9485959 ggattctacactcaattctcttcagtttggatataaattttgtatggtacggatcaggaacaaatacagaaaatgcgtttgaagtttgga 9486048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 735
Target Start/End: Complemental strand, 6406292 - 6406210
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||||||| ||||  ||||||||| ||||||||       ||| |||||||| ||||| |||||||||||||| ||||||||||||    
T  6406292 ttagaacatatgacgatcctaggttccccgagattgc-------ctaggataggtgcaactcactgagacatcatgtctcaccccaatcc 6406210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 736
Target Start/End: Original strand, 33301138 - 33301209
Alignment:
Q  665 taggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||||||||  || |||| |||| |||| ||||| |||||||| |||||||||| ||| |||||||||||||    
T  33301138 taggttcccccaggttgcctacaacctaggatagatggaactcactgagacatcttgtctcaccccaatcct 33301209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 733
Target Start/End: Original strand, 34256188 - 34256271
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaat 733  Q
    |||| ||||||||  ||| ||||| |||||||| |||| |||| |||||||||||||| ||||| |||  ||| ||||||||||    
T  34256188 aacagatggcgatcctagattccccgagattgcctacagcctaggataggtggaactcactgaggcattttgtctcaccccaat 34256271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 736
Target Start/End: Complemental strand, 28144478 - 28144392
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||| ||||||||  ||||||||| |||||||| ||||  |||  ||||||||||||| |||||||||  ||| ||| |||||||||    
T  28144478 aacagatggcgatcctaggttccccgagattgcctacagtctagtataggtggaactcactgagacattttgtctcagcccaatcct 28144392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 9e-35; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 249 - 464
Target Start/End: Complemental strand, 20112658 - 20112445
Alignment:
Q  249 tttttgtcatagttttggctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccctttagtttggatataatttttgtatg 348  Q
    |||| |||||||||||| |||||  ||| |||||| ||| ||||| | | |||| |||||||||||| ||| |||| |||| |||||||| |||||||||    
T  20112658 ttttcgtcatagttttg-ctgtgccatccggaattgagtaattattggattttcagattctacacttaatttcctt-agttgggatataaattttgtatg 20112561  T
Q  349 tttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttgacatggatttttccaggataagctaa 448  Q
     |||||||||| |||| ||||||||||| | |||||||||||||  ||  ||||  ||| |||||||||||||| ||||||||||||| | |||||||||    
T  20112560 attcggattagaaatagattcagaaaacgcgtttaaagtttggattttggtgctgaaaactgcttacgggtttggcatggatttttccggaataagctaa 20112461  T
Q  449 aacgtgaatttaagat 464  Q
    || |||| ||||||||    
T  20112460 aaagtgagtttaagat 20112445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 646 - 736
Target Start/End: Original strand, 31347376 - 31347466
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||||||||||||||||  ||||||| |||||||||| |||| |||| |||||||||||||| |||||||||| ||| |||||||||||||    
T  31347376 ttagaacatatggcgatcctaggttctctgagattgcctacaacctaggataggtggaactcactgagacatcctgtctcaccccaatcct 31347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 641 - 730
Target Start/End: Complemental strand, 31314743 - 31314654
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcacccc 730  Q
    ||||||||||||| ||||||||  |||||||||||||||||| |||| |||| |||||||||||||| |||| ||||||||| |||||||    
T  31314743 tgagattagaacagatggcgatcctaggttccctgagattgcctacaacctaggataggtggaactcactgaaacatcatgtctcacccc 31314654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 3811479 - 3811584
Alignment:
Q  396 ttatgcttgaaattgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaagatggttataaatgattccaggattgattatgga 495  Q
    |||||||  |||| ||||||| |||||||||||| |||| |   ||||||||||||| || |||||| |||||||||||||||||||  |||||||||||    
T  3811479 ttatgctgaaaatggcttacgagtttgacatggactttttcgaaataagctaaaacgagattttaagttggttataaatgattccagagttgattatgga 3811578  T
Q  496 tgccca 501  Q
    ||||||    
T  3811579 tgccca 3811584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 651 - 736
Target Start/End: Complemental strand, 38211436 - 38211351
Alignment:
Q  651 acatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||||||||||| ||||| ||||  ||||||| |||| | || |||||||||||||| |||||| ||| ||| |||||||||||||    
T  38211436 acatatggcgatcataggctccccaagattgcctacaacttaggataggtggaactcactgagagatcctgtctcaccccaatcct 38211351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 731
Target Start/End: Complemental strand, 17863309 - 17863237
Alignment:
Q  659 cgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcacccca 731  Q
    |||| |||||||||| |||||||| || | ||||  ||||||||||||| |||||||||||||| ||||||||    
T  17863309 cgatcataggttccccgagattgcatataacctagaataggtggaactcactgagacatcatgtctcacccca 17863237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 714
Target Start/End: Complemental strand, 29742371 - 29742307
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgaga 714  Q
    |||| |||||||| ||||||||||||||||||| |||| ||||  ||||||||||||| ||||||    
T  29742371 aacagatggcgatcataggttccctgagattgcctacaacctaaaataggtggaactcactgaga 29742307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 735
Target Start/End: Complemental strand, 18010992 - 18010915
Alignment:
Q  657 ggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||||| ||| || |||||||| | || |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  18010992 ggcgattataagttgcc-gagattgcctgcagcctaggataggtggaactcactgagacatcctgtctcaccccaatcc 18010915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 735
Target Start/End: Complemental strand, 29747229 - 29747149
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||| |||| ||||| ||||| || |||| |||| |||| ||||||||| |||||||||| ||| ||||||||||||    
T  29747229 atggtgatcatagattccccgagatcgcctacaacctaggatatgtggaactcactgagacatcctgtctcaccccaatcc 29747149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 33125425 - 33125466
Alignment:
Q  694 gataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||||||||| || ||||||||||| ||||||||||||    
T  33125425 gataggtggaactcactaagacatcatgtctcaccccaatcc 33125466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 6e-30; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 224 - 511
Target Start/End: Original strand, 20809571 - 20809851
Alignment:
Q  224 aaattcgtatagcatatttgtggtgtttttgtcatagttttggctgtgtaatctggaatttagtgattatcgaagtttcggattctacacttgattccct 323  Q
    |||||||||| || |||  ||||  |||| |||||||||| |||||||||| | |||||| ||| ||||| | ||||||| |||| || |||  ||||||    
T  20809571 aaattcgtatggcttataagtgggtttttcgtcatagtttcggctgtgtaaccaggaattgagtaattattggagtttcgaattccacgcttatttccct 20809670  T
Q  324 ttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacgggtttga 423  Q
     |     |||||||| ||||||||||||| ||||| |||   ||||||||||| ||||||||||||||||||| || ||  |||| || |||||||||||    
T  20809671 ct-----ggatataaattttgtatgtttcagattaagaacggattcagaaaacgcatttaaagtttggaaattcatactgcaaatggc-tacgggtttga 20809764  T
Q  424 catggatttttccaggataagctaaaacgtgaatttaagatggttataaatgattccaggattgattatggatgcccacatggttgag 511  Q
      |||||||||||   |||||||| || ||||||| ||  ||||||||||||||| |||| || |||| |||||||| ||||||||||    
T  20809765 tgtggatttttccgaaataagctacaatgtgaattcaaattggttataaatgatttcagg-ttaattacggatgccctcatggttgag 20809851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 25337115 - 25337030
Alignment:
Q  307 tctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttgga 392  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||  ||| ||||||| | ||| |||||||||    
T  25337115 tctacacttaattcccttcagtttggatataaattttgtatgtttcggattaggaatggatttagaaaacgcgtttgaagtttgga 25337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 641 - 733
Target Start/End: Complemental strand, 25336223 - 25336131
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaat 733  Q
    |||| |||||||||||||||||  |||||||||||||||||| || | |||| |||||||||||||| ||| |||||| ||| ||||||||||    
T  25336223 tgagtttagaacatatggcgatcctaggttccctgagattgcctatagcctaggataggtggaactcactgggacatcctgtctcaccccaat 25336131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 735
Target Start/End: Original strand, 20811015 - 20811100
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||| |||||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||||    
T  20811015 aacagatggcgatcctaggttcactgagattgcctacaacctaggataggtggaactcactgagacattctgtctcaccccaatcc 20811100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 735
Target Start/End: Original strand, 4844424 - 4844504
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    ||||||||  |||||||||||||||||| |||| |||| |||||||||||||| ||| | |||| ||| ||||||||||||    
T  4844424 atggcgatcctaggttccctgagattgcctacaacctaggataggtggaactcactgcggcatcctgtctcaccccaatcc 4844504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 656 - 734
Target Start/End: Original strand, 3166424 - 3166502
Alignment:
Q  656 tggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatc 734  Q
    |||||||  |||||||||||||||||| |||| |||| ||||| ||||||||   |||||||||||| |||||||||||    
T  3166424 tggcgatcctaggttccctgagattgcctacaacctaggatagatggaactcatcgagacatcatgtctcaccccaatc 3166502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 733
Target Start/End: Complemental strand, 5557208 - 5557130
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaat 733  Q
    ||||||||  ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||    
T  5557208 atggcgatcctaggttccccgagattgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaat 5557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 735
Target Start/End: Original strand, 25004005 - 25004071
Alignment:
Q  669 ttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||||    
T  25004005 ttccctgagattgcctacagcctaggataggtggaactcactgagacattctgtctcaccccaatcc 25004071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 391
Target Start/End: Complemental strand, 17275935 - 17275850
Alignment:
Q  306 ttctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttgg 391  Q
    ||||||| ||||||||||| ||||||||||||  ||| ||||| ||| |||||| |||  ||||  ||||| ||||| ||||||||    
T  17275935 ttctacatttgattcccttcagtttggatatagatttggtatgattctgattagaaatggattcgaaaaacgcatttgaagtttgg 17275850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 641 - 733
Target Start/End: Complemental strand, 51844041 - 51843949
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaat 733  Q
    |||| |||||||||||| ||||  |||| ||||||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||||    
T  51844041 tgagtttagaacatatgacgatcttagggtccctgagattgcctacaccttaagataggtggaactcactgagacatcatgtctcaccccaat 51843949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 646 - 735
Target Start/End: Complemental strand, 15088354 - 15088265
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||| ||||||||  ||||||||||| |||||| |||| |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  15088354 ttagaacagatggcgatcctaggttccctgcgattgcctacaacctaggataggtggaactcactgagacatcctgtctcaccccaatcc 15088265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 646 - 735
Target Start/End: Complemental strand, 22210962 - 22210873
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||| ||||||||  ||||||||||| |||||| |||| |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  22210962 ttagaacagatggcgatcctaggttccctgcgattgcctacaacctaggataggtggaactcactgagacatcctgtctcaccccaatcc 22210873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 655 - 736
Target Start/End: Original strand, 14150123 - 14150204
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    ||||||||||||||||||| |||||||| ||||   || |||||||||||||| | |||||||||||| |||||||||||||    
T  14150123 atggcgattataggttccccgagattgcctacagtttaggataggtggaactcaccgagacatcatgtctcaccccaatcct 14150204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 646 - 735
Target Start/End: Complemental strand, 22219712 - 22219623
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||| ||||||||  ||||||||||| |||||| |||| |||| |||||||| ||||| |||||||||| ||| ||||||||||||    
T  22219712 ttagaacagatggcgatcctaggttccctgcgattgcctacaacctaggataggtgcaactcactgagacatcctgtctcaccccaatcc 22219623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 659 - 735
Target Start/End: Original strand, 1991595 - 1991671
Alignment:
Q  659 cgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||| || |||||||| |||| | ||||||||||||||||| ||||||||||||| |||||||||||||    
T  1991595 cgatcataggtttcccgagattgcgtacaacttatgataggtggaactcactgagacatcatgcgtcaccccaatcc 1991671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 7899088 - 7898994
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||| ||| ||||  |||||||| ||||||||| ||||  ||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  7899088 tgagtttagaacaaatgtcgatcctaggttccttgagattgcctacaatctaggataggtggaactcactgagacatcttgtctcaccccaatcc 7898994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 735
Target Start/End: Original strand, 14115539 - 14115624
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||| ||||||| || ||| |||||| || |||| |||||||||||| |||||||||||| ||| ||||||||||||    
T  14115539 aacaaatggcgatcataggtttcccgaggttgcttgcagcctaggataggtggaacgcgctgagacatcttgtctcaccccaatcc 14115624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 735
Target Start/End: Complemental strand, 22207399 - 22207310
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||| | ||||||||  |||||||||||  ||||| |||| |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  22207399 ttagaatagatggcgatcttaggttccctgcaattgcctacaacctaggataggtggaactcactgagacatcctgtctcaccccaatcc 22207310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 461
Target Start/End: Complemental strand, 9392748 - 9392590
Alignment:
Q  303 ggattctacacttgattccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatgct 402  Q
    ||||||||||||| |||||||| |||||  ||| || |||||||||||||||||| |||||  ||||| |||||   ||| ||||| || | ||||||||    
T  9392748 ggattctacacttaattcccttcagtttaaatacaaattttgtatgtttcggatttggaatggattcacaaaacgtgtttcaagttagg-attttatgct 9392650  T
Q  403 tgaaa-ttgcttacgggtttgacatggatttttccaggataagctaaaacgtgaatttaa 461  Q
      ||| |||| |||||||| | | ||||||||| |   ||||||||||||||||||||||    
T  9392649 gaaaatttgcctacgggttcggcttggattttttcgaaataagctaaaacgtgaatttaa 9392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 641 - 735
Target Start/End: Original strand, 44193448 - 44193542
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||| | ||||||||  |||||||| ||||||||| |||| |||| |||||||||||||| | |||||||   || ||||||||||||    
T  44193448 tgagtttagaatagatggcgatcctaggttccttgagattgcctacaacctaggataggtggaactcaccgagacatttcgtctcaccccaatcc 44193542  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 676 - 736
Target Start/End: Complemental strand, 7064092 - 7064032
Alignment:
Q  676 agattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    ||||||| |||| |||| |||||||||||||| ||||||||| |||| |||||| ||||||    
T  7064092 agattgcctacaacctaggataggtggaactcactgagacattatgtctcaccctaatcct 7064032  T

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Target: scaffold0046 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 89938 - 89844
Alignment:
Q  641 tgagattagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| |||||||||||||||||  ||||||||||| |||||| |||| |||| |||||||||||||| |||||||||| ||| |||| |||||||    
T  89938 tgagtttagaacatatggcgatcctaggttccctgtgattgcctacagcctaggataggtggaactcactgagacatcttgtctcactccaatcc 89844  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 650 - 736
Target Start/End: Complemental strand, 19802337 - 19802251
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||| ||||||||  ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  19802337 aacagatggcgatcgtaggttccccgagattgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaatcct 19802251  T

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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 735
Target Start/End: Original strand, 21959205 - 21959290
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||||    
T  21959205 aacaaatggcgatcctaggttccccgagattgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaatcc 21959290  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 668 - 735
Target Start/End: Original strand, 3737876 - 3737943
Alignment:
Q  668 gttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||||||| || |||| ||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  3737876 gttccctgagatcgcctacaacctagaataggtggaactcactgagacatcatgtctcaccccaatcc 3737943  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 735
Target Start/End: Original strand, 42786498 - 42786583
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||||| ||| |||| || | |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  42786498 aacagatggcgatcctaggttccccgaggttgcctatagcctaggataggtggaactcactgagacatcttgtctcaccccaatcc 42786583  T

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Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 735
Target Start/End: Complemental strand, 48477488 - 48477403
Alignment:
Q  650 aacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||| ||||||||  ||||||||| ||| |||| || | |||| |||||||||||||| |||||||||| ||| ||||||||||||    
T  48477488 aacagatggcgatcctaggttccccgaggttgcctatagcctaggataggtggaactcactgagacatcttgtctcaccccaatcc 48477403  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 736
Target Start/End: Original strand, 20920353 - 20920420
Alignment:
Q  669 ttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    ||||| |||||||| |||| |||| |||||||||||||| |||||||||||||  ||| |||||||||    
T  20920353 ttccccgagattgcctacaacctaggataggtggaactcactgagacatcatgcctcatcccaatcct 20920420  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 735
Target Start/End: Original strand, 3079019 - 3079108
Alignment:
Q  646 ttagaacatatggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcc 735  Q
    |||||||| ||||||||  ||||||||||| |||| | |||  |||| ||||||||||||||  ||||||||| ||| ||| ||||||||    
T  3079019 ttagaacagatggcgatcctaggttccctgcgatttcctactacctaggataggtggaactcattgagacatcctgtctcagcccaatcc 3079108  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 734
Target Start/End: Complemental strand, 4340618 - 4340549
Alignment:
Q  665 taggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatc 734  Q
    |||||| || ||| |||| |||| |||| |||||||||||||| |||||||||  ||| |||||||||||    
T  4340618 taggtttcccgaggttgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaatc 4340549  T

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Target: scaffold0158 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 736
Target Start/End: Original strand, 1 - 72
Alignment:
Q  665 taggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  1 taggttccccgagattgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaatcct 72  T

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Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 733
Target Start/End: Complemental strand, 41527962 - 41527884
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaat 733  Q
    ||||||||  ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||| ||||||||||    
T  41527962 atggcgatcctaggttccccgagattgcctacagcctaggataggtggaactcactgagacattttgtctcaccccaat 41527884  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 433
Target Start/End: Original strand, 17302873 - 17302990
Alignment:
Q  317 attccctttagtttggatataatttttgtatgtttcggattaggaataaattcagaaaacacatttaaagtttggaaatttatgcttgaaattgcttacg 416  Q
    |||||||| | || |||||||| ||||||||| |||||||||| ||| ||||||||||||| |||  |||||||| || || || | |||| | ||||||    
T  17302873 attcccttcaattcggatataaattttgtatgattcggattagaaatgaattcagaaaacatattcgaagtttggtaaattctgttggaaaatacttacg 17302972  T
Q  417 gg-tttgacatggatttt 433  Q
    || |||| ||||||||||    
T  17302973 ggttttgtcatggatttt 17302990  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 736
Target Start/End: Complemental strand, 22301967 - 22301886
Alignment:
Q  655 atggcgattataggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatcct 736  Q
    |||||||| |||||||||| |  ||||| |||| | || |||||||||||||| || ||||||||||| ||| |||||||||    
T  22301967 atggcgatcataggttccccgcaattgcctacaacttaggataggtggaactcactaagacatcatgtctcatcccaatcct 22301886  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 734
Target Start/End: Complemental strand, 63542 - 63473
Alignment:
Q  665 taggttccctgagattgcttacaccctatgataggtggaactcgctgagacatcatgtgtcaccccaatc 734  Q
    ||||||||| ||||| || |||| | || |||||||||||||| |||||||||| |||  ||||||||||    
T  63542 taggttccccgagatagcatacaacttaggataggtggaactcactgagacatcctgtcacaccccaatc 63473  T

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