View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18896_high_14 (Length: 239)
Name: NF18896_high_14
Description: NF18896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18896_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 33063565 - 33063339
Alignment:
| Q |
1 |
ttaagtgatcatatagagagttgatgaatctccaatcatacatatcctagattagagacggactaggaggtgacaaaatagctggatttattaaatctga |
100 |
Q |
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| T |
33063565 |
ttaagtgatcatatagag--ttgatgaatctccaatcatacatatcctagattagagacggactaagaggtgacaaaatagctggatttattaaatttga |
33063468 |
T |
|
| Q |
101 |
atttagatgataatgaatagattaaaacaatccatcaatcaagtattccctaaaaactctttaacaaaatttaatacaatacacattctcttaacaaaac |
200 |
Q |
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| T |
33063467 |
atttagatgataatgaatagattaaaacaatccatcaatcaagtattcactaaaaactctttaacaaaatttaatacaatacacattctcttaacaaaac |
33063368 |
T |
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| Q |
201 |
accataacaccagtttgtaaggtgatgat |
229 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
33063367 |
cccataacaccagtttgtaaggtgatgat |
33063339 |
T |
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