View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18896_high_16 (Length: 213)
Name: NF18896_high_16
Description: NF18896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18896_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 11469080 - 11468914
Alignment:
| Q |
33 |
actatgtagtgtcaaagacatttactagtctaggacacgtttggagacatgcattcctgtggaagttaccatatttttctactaaagcaatctggtaact |
132 |
Q |
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| T |
11469080 |
actatgtagtgtcaaagacatttaccagtctaggacatgttgggagacatgcattcccgtggaagttaccatatttttctactaaagcaatcttgtaact |
11468981 |
T |
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| Q |
133 |
agagaagatcttgaacatttataaacgatgtttacaaatttgtgtaaaacattttaaaagaactaat |
199 |
Q |
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| T |
11468980 |
aaagaagatcttgaacatttataaacaatgtttacaaatttgtgtaaaacattttaaaagaactaat |
11468914 |
T |
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