View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18897_high_12 (Length: 390)

Name: NF18897_high_12
Description: NF18897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18897_high_12
NF18897_high_12
[»] chr4 (51 HSPs)
chr4 (215-390)||(1963196-1963370)
chr4 (215-390)||(1964368-1964542)
chr4 (225-390)||(10471325-10471489)
chr4 (225-390)||(25684934-25685098)
chr4 (215-390)||(1834119-1834294)
chr4 (225-390)||(13386469-13386634)
chr4 (225-390)||(10470546-10470710)
chr4 (17-104)||(1963469-1963556)
chr4 (225-390)||(5525360-5525523)
chr4 (221-390)||(1290131-1290299)
chr4 (225-390)||(5526063-5526226)
chr4 (225-390)||(25685759-25685923)
chr4 (215-390)||(1835029-1835203)
chr4 (225-369)||(46638662-46638805)
chr4 (286-390)||(10447006-10447110)
chr4 (221-390)||(17388144-17388311)
chr4 (221-387)||(12129626-12129791)
chr4 (225-390)||(13386014-13386180)
chr4 (281-390)||(17382993-17383100)
chr4 (221-390)||(31599789-31599956)
chr4 (221-390)||(31600919-31601086)
chr4 (285-390)||(48780248-48780352)
chr4 (225-390)||(48780983-48781146)
chr4 (285-388)||(19750572-19750673)
chr4 (285-388)||(19789133-19789234)
chr4 (259-390)||(21177997-21178126)
chr4 (257-390)||(50909641-50909774)
chr4 (314-390)||(49308052-49308127)
chr4 (308-387)||(8758856-8758935)
chr4 (221-387)||(1289100-1289265)
chr4 (293-390)||(26421627-26421722)
chr4 (285-387)||(35935530-35935631)
chr4 (309-390)||(3928878-3928959)
chr4 (221-390)||(10448194-10448361)
chr4 (259-387)||(55603503-55603628)
chr4 (288-376)||(27257960-27258047)
chr4 (285-390)||(52491604-52491708)
chr4 (286-390)||(13509357-13509459)
chr4 (286-387)||(8155741-8155840)
chr4 (284-390)||(8757675-8757779)
chr4 (314-387)||(37728590-37728662)
chr4 (314-390)||(3927666-3927742)
chr4 (287-390)||(14868890-14868990)
chr4 (287-390)||(14876944-14877044)
chr4 (337-388)||(52490468-52490519)
chr4 (340-390)||(20919582-20919632)
chr4 (286-380)||(21539069-21539162)
chr4 (324-377)||(2837149-2837202)
chr4 (337-390)||(51291419-51291472)
chr4 (281-353)||(31435801-31435873)
chr4 (314-390)||(49306775-49306850)
[»] chr3 (64 HSPs)
chr3 (215-390)||(51037536-51037709)
chr3 (215-390)||(51038717-51038891)
chr3 (221-390)||(54540724-54540891)
chr3 (17-104)||(51037810-51037897)
chr3 (225-387)||(47610517-47610678)
chr3 (221-390)||(22776746-22776913)
chr3 (225-390)||(47609697-47609861)
chr3 (225-390)||(51469972-51470136)
chr3 (222-390)||(7758402-7758569)
chr3 (241-390)||(46721173-46721321)
chr3 (232-390)||(51470399-51470555)
chr3 (250-390)||(29932661-29932799)
chr3 (250-390)||(29981815-29981953)
chr3 (215-390)||(534499-534673)
chr3 (224-390)||(29931226-29931391)
chr3 (224-390)||(29980380-29980545)
chr3 (260-390)||(55191967-55192095)
chr3 (314-390)||(19984849-19984925)
chr3 (286-390)||(46719941-46720044)
chr3 (316-390)||(49216247-49216321)
chr3 (286-387)||(23770405-23770505)
chr3 (51-120)||(52104759-52104828)
chr3 (285-390)||(54539755-54539859)
chr3 (283-387)||(53616011-53616114)
chr3 (285-387)||(7267647-7267747)
chr3 (337-390)||(47615596-47615649)
chr3 (294-390)||(8875906-8876001)
chr3 (221-390)||(19986004-19986173)
chr3 (221-387)||(51347271-51347436)
chr3 (314-390)||(12700175-12700249)
chr3 (307-387)||(40426796-40426877)
chr3 (282-390)||(53614819-53614925)
chr3 (286-390)||(12703498-12703600)
chr3 (314-390)||(23769857-23769933)
chr3 (286-390)||(47614185-47614288)
chr3 (307-390)||(53901406-53901487)
chr3 (287-390)||(5029682-5029783)
chr3 (221-387)||(7268761-7268924)
chr3 (224-389)||(8456479-8456642)
chr3 (314-371)||(34019170-34019227)
chr3 (287-386)||(24516464-24516562)
chr3 (307-390)||(28262193-28262275)
chr3 (307-390)||(28263129-28263212)
chr3 (271-387)||(39844178-39844295)
chr3 (307-390)||(52276304-52276387)
chr3 (307-390)||(52281565-52281648)
chr3 (337-383)||(22775783-22775828)
chr3 (285-390)||(52839037-52839141)
chr3 (285-390)||(52840601-52840705)
chr3 (342-390)||(535835-535883)
chr3 (313-381)||(6170281-6170349)
chr3 (307-390)||(18442630-18442714)
chr3 (307-390)||(18456081-18456165)
chr3 (307-390)||(19487704-19487788)
chr3 (342-390)||(25336358-25336406)
chr3 (343-387)||(39843054-39843098)
chr3 (315-390)||(5001200-5001275)
chr3 (307-390)||(8338940-8339023)
chr3 (61-112)||(11670704-11670755)
chr3 (221-309)||(26722612-26722699)
chr3 (221-309)||(26723795-26723882)
chr3 (286-387)||(54987005-54987103)
chr3 (313-366)||(6249633-6249686)
chr3 (350-390)||(31039253-31039293)
[»] scaffold0321 (2 HSPs)
scaffold0321 (215-388)||(18730-18902)
scaffold0321 (215-377)||(19337-19498)
[»] scaffold0003 (3 HSPs)
scaffold0003 (225-390)||(49370-49534)
scaffold0003 (259-390)||(39344-39474)
scaffold0003 (339-390)||(43560-43611)
[»] chr7 (39 HSPs)
chr7 (225-390)||(3227531-3227695)
chr7 (225-388)||(17781663-17781825)
chr7 (225-390)||(31949322-31949486)
chr7 (232-390)||(31949746-31949903)
chr7 (221-390)||(11658379-11658547)
chr7 (225-390)||(47525304-47525468)
chr7 (225-389)||(3227109-3227271)
chr7 (232-387)||(128545-128699)
chr7 (260-387)||(11662523-11662649)
chr7 (232-390)||(127337-127492)
chr7 (215-390)||(30439285-30439458)
chr7 (285-390)||(31659622-31659727)
chr7 (286-387)||(42886284-42886384)
chr7 (286-390)||(18371424-18371527)
chr7 (307-390)||(22630470-22630553)
chr7 (293-390)||(17782558-17782654)
chr7 (286-390)||(21505416-21505517)
chr7 (281-390)||(48934896-48935004)
chr7 (286-390)||(7500455-7500557)
chr7 (288-377)||(18372457-18372544)
chr7 (286-390)||(22629483-22629589)
chr7 (286-390)||(7501850-7501953)
chr7 (318-390)||(20163585-20163657)
chr7 (17-112)||(30439085-30439181)
chr7 (286-385)||(14999153-14999249)
chr7 (307-390)||(31661027-31661110)
chr7 (286-390)||(47369781-47369884)
chr7 (339-390)||(32253448-32253499)
chr7 (316-383)||(47524532-47524599)
chr7 (316-390)||(34174010-34174083)
chr7 (308-390)||(39182156-39182237)
chr7 (337-390)||(20636869-20636922)
chr7 (342-390)||(21508457-21508503)
chr7 (337-390)||(27869196-27869249)
chr7 (314-367)||(48933690-48933743)
chr7 (354-390)||(5111442-5111478)
chr7 (350-390)||(9822330-9822370)
chr7 (350-390)||(10724255-10724295)
chr7 (225-265)||(47524623-47524663)
[»] chr6 (38 HSPs)
chr6 (225-390)||(27437828-27437992)
chr6 (225-390)||(8659265-8659429)
chr6 (225-390)||(3721612-3721776)
chr6 (225-390)||(8660141-8660304)
chr6 (232-387)||(34834523-34834677)
chr6 (314-390)||(16704522-16704598)
chr6 (293-390)||(8822798-8822894)
chr6 (257-387)||(1829572-1829701)
chr6 (312-390)||(6842306-6842384)
chr6 (285-390)||(10784592-10784697)
chr6 (285-390)||(8821873-8821977)
chr6 (284-385)||(29473082-29473182)
chr6 (283-390)||(30495692-30495797)
chr6 (287-390)||(27322067-27322168)
chr6 (221-390)||(7314880-7315047)
chr6 (337-390)||(7316342-7316395)
chr6 (307-390)||(14822360-14822443)
chr6 (259-377)||(10785884-10786000)
chr6 (285-390)||(3333023-3333127)
chr6 (338-390)||(3722556-3722608)
chr6 (307-390)||(16703570-16703650)
chr6 (331-390)||(16415575-16415634)
chr6 (337-388)||(26717132-26717183)
chr6 (259-390)||(27447884-27448014)
chr6 (285-366)||(26575051-26575131)
chr6 (286-390)||(17496793-17496901)
chr6 (283-390)||(20973294-20973400)
chr6 (339-390)||(27443750-27443801)
chr6 (225-299)||(3722460-3722534)
chr6 (288-365)||(12350823-12350898)
chr6 (307-390)||(14823593-14823677)
chr6 (287-390)||(27318315-27318418)
chr6 (225-365)||(34830927-34831066)
chr6 (215-389)||(12382638-12382811)
chr6 (256-390)||(26574619-26574751)
chr6 (285-387)||(5658759-5658860)
chr6 (314-390)||(6840194-6840268)
chr6 (338-390)||(13345552-13345603)
[»] chr1 (57 HSPs)
chr1 (225-390)||(52827347-52827511)
chr1 (225-390)||(41364829-41364992)
chr1 (241-390)||(51684366-51684514)
chr1 (283-390)||(35066997-35067103)
chr1 (224-390)||(24422800-24422965)
chr1 (225-387)||(52828007-52828168)
chr1 (215-390)||(35595119-35595294)
chr1 (286-390)||(51685763-51685866)
chr1 (221-390)||(11437132-11437300)
chr1 (286-387)||(45149968-45150068)
chr1 (224-390)||(12389918-12390082)
chr1 (215-390)||(35594217-35594389)
chr1 (221-387)||(39153050-39153214)
chr1 (285-390)||(33088614-33088718)
chr1 (285-390)||(39699764-39699867)
chr1 (285-390)||(52274968-52275072)
chr1 (286-390)||(45148581-45148683)
chr1 (285-387)||(24426072-24426173)
chr1 (221-390)||(11436042-11436210)
chr1 (225-390)||(41366068-41366231)
chr1 (314-390)||(14999285-14999360)
chr1 (289-387)||(43058789-43058885)
chr1 (221-390)||(36612853-36613020)
chr1 (285-390)||(36613901-36614005)
chr1 (221-310)||(46524618-46524706)
chr1 (221-310)||(46525734-46525822)
chr1 (314-390)||(45157234-45157309)
chr1 (308-390)||(46066525-46066605)
chr1 (309-390)||(39222493-39222575)
chr1 (314-387)||(39151934-39152007)
chr1 (259-390)||(16290093-16290224)
chr1 (286-390)||(23980464-23980567)
chr1 (314-390)||(43060031-43060107)
chr1 (241-312)||(17505038-17505109)
chr1 (224-387)||(52276099-52276261)
chr1 (286-387)||(37526876-37526975)
chr1 (313-387)||(45156052-45156126)
chr1 (314-387)||(30249515-30249588)
chr1 (286-387)||(50680335-50680434)
chr1 (342-390)||(11190385-11190433)
chr1 (314-390)||(39698563-39698639)
chr1 (342-390)||(50681657-50681705)
chr1 (17-64)||(46524850-46524897)
chr1 (285-387)||(7983053-7983153)
chr1 (286-387)||(43378711-43378810)
chr1 (314-390)||(7674528-7674602)
chr1 (286-390)||(7675457-7675559)
chr1 (221-309)||(14512556-14512643)
chr1 (344-390)||(39221358-39221405)
chr1 (307-390)||(44404442-44404525)
chr1 (308-390)||(4059522-4059604)
chr1 (317-390)||(14999983-15000056)
chr1 (337-390)||(16281318-16281371)
chr1 (337-390)||(29182001-29182054)
chr1 (51-112)||(46066822-46066883)
chr1 (341-389)||(2260629-2260677)
chr1 (318-366)||(7060858-7060906)
[»] chr5 (47 HSPs)
chr5 (215-387)||(42195137-42195306)
chr5 (221-390)||(28538676-28538843)
chr5 (225-390)||(5778773-5778937)
chr5 (286-390)||(25523069-25523172)
chr5 (215-390)||(42196127-42196301)
chr5 (221-390)||(16650788-16650956)
chr5 (221-390)||(25055412-25055580)
chr5 (281-387)||(20216756-20216861)
chr5 (221-390)||(20214196-20214363)
chr5 (221-387)||(24332916-24333080)
chr5 (221-390)||(36486422-36486589)
chr5 (286-390)||(18486900-18487003)
chr5 (286-390)||(19752912-19753014)
chr5 (314-390)||(22940647-22940723)
chr5 (285-390)||(5777901-5778003)
chr5 (215-390)||(25056307-25056482)
chr5 (221-387)||(28539754-28539917)
chr5 (284-390)||(40255668-40255773)
chr5 (285-390)||(21835041-21835144)
chr5 (286-382)||(1015492-1015587)
chr5 (283-387)||(38834090-38834192)
chr5 (257-388)||(36485302-36485432)
chr5 (281-390)||(1796054-1796162)
chr5 (293-390)||(33160291-33160387)
chr5 (314-390)||(18154494-18154569)
chr5 (314-390)||(33158098-33158174)
chr5 (311-390)||(21834941-21835019)
chr5 (324-390)||(38476715-38476781)
chr5 (342-390)||(5730441-5730490)
chr5 (232-361)||(5730806-5730934)
chr5 (286-390)||(19754128-19754232)
chr5 (325-388)||(2373149-2373212)
chr5 (324-390)||(20653820-20653886)
chr5 (314-390)||(25524152-25524229)
chr5 (337-390)||(31576610-31576663)
chr5 (56-112)||(2686141-2686197)
chr5 (294-390)||(7311590-7311685)
chr5 (340-388)||(15885132-15885180)
chr5 (53-112)||(42195953-42196011)
chr5 (285-367)||(1797294-1797375)
chr5 (313-387)||(2186774-2186847)
chr5 (316-366)||(34893689-34893739)
chr5 (321-390)||(2188962-2189030)
chr5 (337-390)||(18485138-18485191)
chr5 (337-390)||(23040287-23040340)
chr5 (221-309)||(3598813-3598900)
chr5 (318-390)||(41663754-41663826)
[»] scaffold2034 (2 HSPs)
scaffold2034 (221-390)||(233-400)
scaffold2034 (221-369)||(912-1058)
[»] chr8 (50 HSPs)
chr8 (221-390)||(22220388-22220556)
chr8 (241-387)||(8389642-8389787)
chr8 (215-390)||(22221291-22221465)
chr8 (215-390)||(22227633-22227807)
chr8 (241-387)||(11282011-11282156)
chr8 (284-390)||(12351921-12352026)
chr8 (221-387)||(11287779-11287943)
chr8 (286-390)||(5513982-5514084)
chr8 (286-390)||(10007761-10007864)
chr8 (224-390)||(43661759-43661924)
chr8 (287-390)||(8388464-8388564)
chr8 (286-390)||(10006344-10006447)
chr8 (288-388)||(29043400-29043499)
chr8 (284-390)||(12353357-12353460)
chr8 (224-390)||(30335639-30335804)
chr8 (324-390)||(36249552-36249618)
chr8 (286-388)||(43661267-43661368)
chr8 (286-390)||(1823552-1823655)
chr8 (286-390)||(1857997-1858100)
chr8 (250-390)||(11283171-11283310)
chr8 (286-390)||(24122883-24122985)
chr8 (271-390)||(42982640-42982758)
chr8 (285-387)||(29968334-29968434)
chr8 (308-389)||(18979139-18979220)
chr8 (285-381)||(18978029-18978123)
chr8 (294-385)||(1824084-1824174)
chr8 (294-385)||(1858529-1858619)
chr8 (307-390)||(38974795-38974878)
chr8 (307-390)||(38980062-38980145)
chr8 (307-390)||(39005893-39005976)
chr8 (307-390)||(39011159-39011242)
chr8 (23-116)||(24360938-24361030)
chr8 (314-390)||(32207350-32207424)
chr8 (337-390)||(32968456-32968509)
chr8 (257-381)||(18970920-18971042)
chr8 (286-390)||(30568887-30568989)
chr8 (251-387)||(40471110-40471244)
chr8 (331-390)||(11456638-11456697)
chr8 (286-372)||(24123896-24123981)
chr8 (337-390)||(24483143-24483196)
chr8 (337-390)||(32973984-32974037)
chr8 (337-382)||(36337621-36337666)
chr8 (342-390)||(45114569-45114617)
chr8 (17-105)||(2379321-2379416)
chr8 (343-390)||(11288914-11288961)
chr8 (307-390)||(34625218-34625303)
chr8 (259-309)||(45112949-45112999)
chr8 (337-390)||(3819489-3819541)
chr8 (313-390)||(30336525-30336602)
chr8 (286-387)||(30570254-30570353)
[»] chr2 (47 HSPs)
chr2 (257-390)||(36449778-36449910)
chr2 (284-390)||(38840489-38840594)
chr2 (225-390)||(1034407-1034570)
chr2 (215-390)||(18797246-18797421)
chr2 (292-390)||(7899886-7899983)
chr2 (289-390)||(18904367-18904467)
chr2 (286-390)||(22587952-22588054)
chr2 (286-390)||(23869533-23869635)
chr2 (223-390)||(11938725-11938889)
chr2 (215-358)||(11996739-11996881)
chr2 (221-387)||(7898694-7898858)
chr2 (221-390)||(1093080-1093246)
chr2 (221-390)||(22848191-22848359)
chr2 (224-389)||(26545457-26545621)
chr2 (317-376)||(5819741-5819800)
chr2 (284-387)||(36450917-36451018)
chr2 (308-390)||(18906006-18906088)
chr2 (284-390)||(38839242-38839347)
chr2 (286-390)||(11258809-11258912)
chr2 (221-390)||(41879146-41879313)
chr2 (281-390)||(16446154-16446262)
chr2 (314-390)||(802616-802691)
chr2 (286-390)||(18299373-18299476)
chr2 (314-389)||(18300749-18300822)
chr2 (222-387)||(13567975-13568137)
chr2 (307-366)||(32739647-32739706)
chr2 (284-390)||(41878092-41878199)
chr2 (286-389)||(13030293-13030392)
chr2 (314-390)||(18868924-18869000)
chr2 (281-387)||(8535649-8535752)
chr2 (324-387)||(13830270-13830332)
chr2 (224-390)||(11257622-11257786)
chr2 (324-390)||(28365512-28365577)
chr2 (289-390)||(13570558-13570658)
chr2 (221-366)||(22587525-22587667)
chr2 (318-377)||(5362188-5362247)
chr2 (281-387)||(8534586-8534689)
chr2 (224-387)||(26544152-26544313)
chr2 (250-328)||(1091757-1091834)
chr2 (337-390)||(21837303-21837354)
chr2 (307-390)||(22067800-22067885)
chr2 (225-266)||(1033322-1033363)
chr2 (286-366)||(28617946-28618024)
chr2 (314-362)||(810806-810854)
chr2 (337-389)||(1033212-1033263)
chr2 (330-390)||(26829329-26829389)
chr2 (318-370)||(43029036-43029088)
[»] scaffold1303 (1 HSPs)
scaffold1303 (215-390)||(1439-1613)
[»] scaffold0302 (2 HSPs)
scaffold0302 (257-390)||(17470-17602)
scaffold0302 (308-390)||(18795-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (292-390)||(5442-5539)
scaffold0294 (251-390)||(4442-4580)
[»] scaffold0632 (1 HSPs)
scaffold0632 (285-390)||(3305-3408)
[»] scaffold0019 (2 HSPs)
scaffold0019 (221-390)||(60090-60258)
scaffold0019 (221-389)||(61392-61559)
[»] scaffold0049 (2 HSPs)
scaffold0049 (285-390)||(7412-7516)
scaffold0049 (311-390)||(7538-7616)
[»] scaffold0586 (2 HSPs)
scaffold0586 (294-387)||(6346-6438)
scaffold0586 (308-390)||(9045-9126)
[»] scaffold0320 (1 HSPs)
scaffold0320 (286-390)||(19488-19591)
[»] scaffold0227 (1 HSPs)
scaffold0227 (307-390)||(137-220)
[»] scaffold0369 (1 HSPs)
scaffold0369 (314-390)||(13193-13267)
[»] scaffold0093 (2 HSPs)
scaffold0093 (307-389)||(2483-2564)
scaffold0093 (307-389)||(7106-7187)
[»] scaffold0186 (2 HSPs)
scaffold0186 (285-390)||(23081-23183)
scaffold0186 (342-390)||(23943-23991)
[»] scaffold0112 (1 HSPs)
scaffold0112 (238-390)||(37148-37298)
[»] scaffold0045 (3 HSPs)
scaffold0045 (342-390)||(49137-49185)
scaffold0045 (215-253)||(49000-49038)
scaffold0045 (215-268)||(48427-48480)
[»] scaffold0002 (1 HSPs)
scaffold0002 (337-371)||(15706-15740)


Alignment Details
Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 1963370 - 1963196
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  1963370 aatggctaattacacatgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggctaattcttag-ggggcta 1963272  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1963271 aaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 1963196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 1964368 - 1964542
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||||  ||| | |    
T  1964368 aatggttaattacacacgtggcatgccaaatcagcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattctta-agggacca 1964466  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  1964467 aaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 10471325 - 10471489
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| |||||||||||||||| |||| ||    
T  10471325 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaa-ttgtggt 10471423  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10471424 tttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 25685098 - 25684934
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  25685098 tacacatgtggcatgccaaatcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 25685000  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | ||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25684999 tttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 1834294 - 1834119
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| ||||||||||||||||||||||||||||  |||| | |||||||||||   |||| |||||    |||||| ||||||| |||||||||||| |    
T  1834294 aatggttaattacacacgtggcatgccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggcca 1834195  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||| | |||| ||||||||||||| || ||||| |||||||  ||||||||||||||||||||||    
T  1834194 aaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 13386469 - 13386634
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||  ||||||||||||| ||||||| ||    
T  13386469 tacacatgtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggct-aaattgtggt 13386567  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaagggggg-aaaagtgcactttagcc 390  Q
    ||| || | ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  13386568 tttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcc 13386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 10470710 - 10470546
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| |||||||||||||||| ||||  |    
T  10470710 tacacatgtggcatgccatatcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaa-ttgtgat 10470612  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10470611 tttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 1963556 - 1963469
Alignment:
Q  17 agattgttgttgttgttgaaaagattcatgtaatattttctggattttggttgagaagaaaataaagctgttaagaaaatgaaggaga 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  1963556 agattgttgttgttgttgaaaagattcatgttatattttctgggttttggttgagaagaaaatgaagctgttaagaaaatgaaggaga 1963469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 5525523 - 5525360
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  5525523 tacacatgtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 5525425  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||||||||||||||| |||||||||||| ||||||||||| || |||||||||    
T  5525424 tttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcc 5525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 1290131 - 1290299
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||| |||||||||||  |  | |||||||||||||||||||   |||| |||||    |||||||||| ||| ||||||||| ||||||||||    
T  1290131 taattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggg-gctaaaattg 1290229  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | ||  ||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  1290230 tagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcc 1290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 5526063 - 5526226
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||  ||||||| |||||||| ||||||||||||| ||||||| ||    
T  5526063 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggct-aaattgtggt 5526161  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||  | | || |||| ||||||||||| |||||||||||| || |||||||||||||||||||||    
T  5526162 tttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcc 5526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 25685759 - 25685923
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| |||||||||| || ||||||| ||    
T  25685759 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtct-aaattgtggt 25685857  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  25685858 tttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 25685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 1835029 - 1835203
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| ||||||||||||||||||||||||| || ||||||   ||||||||||   |||| |||||    |||||||||||||| |||||||||| | |    
T  1835029 aatggttaattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtc-a 1835127  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||  | | || |||||||||||||||| ||||||||||||| ||  |||||||||||||||||||    
T  1835128 aaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagcc 1835203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 369
Target Start/End: Original strand, 46638662 - 46638805
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    ||||| |||| ||||||||||||| |||||||  |||||||||| | |||| ||| |   |||||||||| |||| ||||||||| |||||||||||| |    
T  46638662 tacacgcgtgacatgccaaatcagcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggg-gctaaaattgtaat 46638760  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaagg 369  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  46638761 ttttgttcataggggatcaaaattccaactttttgaaagttaagg 46638805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 10447110 - 10447006
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaag-gggggaaaagtgcact 384  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||| |||| ||||  |||||||||||||||||||| ||||| ||||||||||||||||    
T  10447110 tgcaaaggggctaaatcttagggggg-taaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcact 10447012  T
Q  385 ttagcc 390  Q
    ||||||    
T  10447011 ttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 17388144 - 17388311
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| ||||| ||  | ||||||   ||||||||||    ||| ||| ||||||| |||||||||||||||| ||||||| |||||||    
T  17388144 taattacacacgtggcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattctt-ggggggccaaaattg 17388242  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| ||| | || |||  ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  17388243 tagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 17388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 12129791 - 12129626
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| |||||  |  | ||||| |  |||||||||| | ||||||||||    |||||| ||||||| ||||| |||| | |||||||    
T  12129791 taattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtc-aaaattg 12129693  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||| | || |||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  12129692 tagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 13386180 - 13386014
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| | |||||| |||||||||||   ||||||| ||    
T  13386180 tacacatgtggcatgccatatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggt 13386081  T
Q  325 ttttgttcatatggggtcaaaattgcaa-ctttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| |||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  13386080 tttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagcc 13386014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 17383100 - 17382993
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||| | || |||  ||||||||||| |||||||||||| ||||| ||||||||    
T  17383100 actattgcaaaggggataattctt-ggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtg 17383003  T
Q  381 cactttagcc 390  Q
    ||||||||||    
T  17383002 cactttagcc 17382993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 31599956 - 31599789
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  ||||| ||||||||||||  ||||| || ||   ||||||||||||||| |||||||||  | |||||||    
T  31599956 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggacc-aaaattg 31599859  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |||||||||||||||| ||||| ||||||| ||||| |||||||||||| ||||    
T  31599858 tagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 31599789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 31600919 - 31601086
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||||||||| ||  |  ||||| ||||||||||||  ||||| || ||   ||||||| ||||||| ||||| |||| | |||||||    
T  31600919 taattacacacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtc-aaaattg 31601016  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |||||||||||||||| ||||| |||||||  |||| |||||||||||||||||    
T  31601017 tagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

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Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 48780352 - 48780248
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| |||||||||||||||| |||| ||||| || | || |||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  48780352 ttgcaatggggctaaatcttaggggggctaaa-ttgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcact 48780254  T
Q  385 ttagcc 390  Q
    ||||||    
T  48780253 ttagcc 48780248  T

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Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 48780983 - 48781146
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||  ||||||| ||||||||||  | ||||||||||   |||||| |||||||| | |||||||||||||| |||| ||    
T  48780983 tacacatgtggcatgccatatcatcgttgactaggtcaaaatttgtcaaaatgaccaaagttgcaatggggctaaattttaggggggctaaa-ttgtggt 48781081  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||  ||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  48781082 tttagtactta-gggaccaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcc 48781146  T

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Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 388
Target Start/End: Original strand, 19750572 - 19750673
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||| | || |||| ||||||||||| ||||| |||||| ||||||||||||||||||    
T  19750572 ttgcaatggggctaaatcttagggggg-taaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcact 19750669  T
Q  385 ttag 388  Q
    ||||    
T  19750670 ttag 19750673  T

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Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 388
Target Start/End: Complemental strand, 19789234 - 19789133
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||| | || |||| ||||||||||| ||||| |||||| ||||||||||||||||||    
T  19789234 ttgcaatggggctaaatcttagggggg-taaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcact 19789137  T
Q  385 ttag 388  Q
    ||||    
T  19789136 ttag 19789133  T

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Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 390
Target Start/End: Complemental strand, 21178126 - 21177997
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    ||||||||||  |||||||| ||   ||||||| ||||||| | |||||||| | |||||||||||||||||||||| ||| |||||||||||||||| |    
T  21178126 gtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtc-aaaattgtagtttttgttcataggggatcaaaattgcaactttat 21178028  T
Q  359 gaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| ||||||| ||||| ||||||||||    
T  21178027 gaaagtt-agggggggaaagtacactttagcc 21177997  T

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Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 50909641 - 50909774
Alignment:
Q  257 cggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttt 356  Q
    |||||||||||| | |||| |||||    |||||||||||||| ||||| |||||  ||||||||||||||| | |||| || |||||||| ||||||||    
T  50909641 cggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaacttt 50909740  T
Q  357 ttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    || ||| ||| || || |||||||||||||||||    
T  50909741 ttaaaacttagggtggaaaaagtgcactttagcc 50909774  T

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Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 49308052 - 49308127
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  49308052 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 49308127  T

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Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 8758856 - 8758935
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||| ||||||||||||| ||| | || |||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  8758856 ggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

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Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 1289265 - 1289100
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||| |||||||||||||||  | || |||||||||||||||||||   |||| |||||    ||||| |||| ||| ||||| | || |||||||||    
T  1289265 taattatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagagg-ctaaaattg 1289167  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||| | | ||  || |||||||| ||| | |||||||||||||||||||||||| |||||||    
T  1289166 tagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 26421627 - 26421722
Alignment:
Q  293 gggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| ||||| |||| | ||||||||||||||||| | || | |||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  26421627 gggctaaatcttaaggggtc-aaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcc 26421722  T

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Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 35935530 - 35935631
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| | |||||| |||||||||| | ||||||||||||| ||| | || ||||  |||||||||| ||||| |||||||||||||| ||||||||||    
T  35935530 ttgcaatgaggctaaatcttagggggcc-aaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcact 35935628  T
Q  385 tta 387  Q
    |||    
T  35935629 tta 35935631  T

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Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 3928878 - 3928959
Alignment:
Q  309 gggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| |||||||| |||||  | |||| |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  3928878 gggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 3928959  T

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Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 10448194 - 10448361
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  |||||| |||||||||||   |||| |||||    |||||||||||||  |||||| ||| | |||||||    
T  10448194 taattacacacgtggcatgccacgtaggcattgact-ggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggcc-aaaattg 10448291  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| |||| ||||  ||||| |||||||||||||| ||| ||| ||  |||||||||||||||    
T  10448292 tagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcc 10448361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 259 - 387
Target Start/End: Original strand, 55603503 - 55603628
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    ||||||||||  | ||| ||| ||||||||||| | ||| ||||||  |||||| ||||| ||||||||||| || | ||| | |||||||||| |||||    
T  55603503 gtcaaaattgacataaaggactactattgcaaatgagcttattctt--gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagttttt 55603600  T
Q  359 gaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||||| |||| ||||||||||||||    
T  55603601 gaaagttaa-ggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 27257960 - 27258047
Alignment:
Q  288 caaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaa 376  Q
    |||||||||||| ||||| ||||  |||||||| |||||||||  |||  ||||||||||||||||||||| |||||||||||| ||||    
T  27257960 caaaggggctaaatcttaaggggt-taaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggagaaa 27258047  T

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Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 52491604 - 52491708
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| | |||||||| | ||||||||||||| |||   ||  ||  ||||||||||| ||||||||||||||||| |||||||| ||||    
T  52491604 ttgcaatggggctaaattttagggggcc-aaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacact 52491702  T
Q  385 ttagcc 390  Q
    ||||||    
T  52491703 ttagcc 52491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 13509357 - 13509459
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||  | ||||||||||||||  | | |  |||| ||||||||||| ||||| |||||| ||||||||||||| |||||    
T  13509357 tgcaaaggggctaaatcttaggggatc-aaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactt 13509454  T
Q  386 tagcc 390  Q
    |||||    
T  13509455 tagcc 13509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 8155840 - 8155741
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtc-aaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||| |||||| |||||||||| | ||||||||||||||||  | || |||  | |||||||||| |||||||||||||  ||||||||||||||||    
T  8155840 tgcaaagcggctaaatcttagggggcc-aaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcact 8155744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 8757779 - 8757675
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||| |||||||| ||||| |||  | ||||||||||||| ||| | || ||||  ||||||| || |||||||||||||| |||| ||||||||||    
T  8757779 attgcaatggggctaaatcttaagggtcc-aaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcac 8757682  T
Q  384 tttagcc 390  Q
    |||||||    
T  8757681 tttagcc 8757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 37728590 - 37728662
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||||||||||||| |||| | || ||||||||||||||||| |||||| ||| || |||| |||||||||    
T  37728590 aaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtt-aggaggaaaaaatgcacttta 37728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 3927742 - 3927666
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||  | |||  |||| |||||| ||||| |||| |||||||  ||||||||||||||||||||||    
T  3927742 aaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcc 3927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 14868990 - 14868890
Alignment:
Q  287 gcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 386  Q
    |||| ||||||||||||||||||||   ||||||| |||||  | | ||  ||| |||||||||||  ||||||||| || |||||||||||||||||||    
T  14868990 gcaatggggctaattcttaggggggg--aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttt 14868894  T
Q  387 agcc 390  Q
    ||||    
T  14868893 agcc 14868890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 14876944 - 14877044
Alignment:
Q  287 gcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 386  Q
    |||| ||||||||||||||||||||   ||||||| |||||  | | ||  ||| |||||||||||  ||||||||| || |||||||||||||||||||    
T  14876944 gcaatggggctaattcttaggggggg--aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttt 14877040  T
Q  387 agcc 390  Q
    ||||    
T  14877041 agcc 14877044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 52490519 - 52490468
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    ||||||||||||||||| |||||||| ||||| | |||||| ||||||||||    
T  52490519 ggggtcaaaattgcaacattttgaaacttaagagcggaaaattgcactttag 52490468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 390
Target Start/End: Original strand, 20919582 - 20919632
Alignment:
Q  340 gtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  20919582 gtcaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 20919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 380
Target Start/End: Original strand, 21539069 - 21539162
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    |||||||| ||||| |||||||||| | |||||||||||||||   | || | || ||||||||||| ||||| ||| ||||||| |||||||||    
T  21539069 tgcaaaggagctaaatcttagggggtc-aaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 2837149 - 2837202
Alignment:
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaa 377  Q
    ||||| ||| || |||| |||||||||||||| ||||||||||||||| |||||    
T  2837149 ttttttttcttagggggccaaaattgcaacttcttgaaagttaaggggcgaaaa 2837202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 51291419 - 51291472
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||||||||||||| ||| |||||||| ||||| || |||||||||    
T  51291419 ggggccaaaattgcaactttttaaaacttaaggggtgaaaattggactttagcc 51291472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 31435801 - 31435873
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaac 353  Q
    ||||||||||||||||||| ||| ||||||| |||| || |  ||||| || ||| ||||||||||| |||||    
T  31435801 actattgcaaaggggctaaatctaaggggggttaaagttttcattttttttaatagggggtcaaaatcgcaac 31435873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 49306850 - 49306775
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | ||   || ||||||||||| ||||||||||||  ||||  |||||||||||||||||    
T  49306850 aaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt-gggggaaaaaagtgcactttagcc 49306775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 51037709 - 51037536
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| |||||||    
T  51037709 aatggttaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgttaaaaaggaccactactgcaaaggggctaattcttag-ggggcta 51037611  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  51037610 aaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 51038717 - 51038891
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  ||||||||  ||| | |    
T  51038717 aatggttaattacacacgtggcatgccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattctta-agggacca 51038815  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  51038816 aaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcc 51038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 54540724 - 54540891
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  ||||| ||||||||||||  ||||| || ||   ||||||||||||||| |||||||||| | |||||||    
T  54540724 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggcc-aaaattg 54540821  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  54540822 tagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 54540891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 51037897 - 51037810
Alignment:
Q  17 agattgttgttgttgttgaaaagattcatgtaatattttctggattttggttgagaagaaaataaagctgttaagaaaatgaaggaga 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  51037897 agattgttgttgttgttgaaaagattcatgttatattttctgggttttggttgagaagaaaatgaagctgttaagaaaatgaaggaga 51037810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 225 - 387
Target Start/End: Original strand, 47610517 - 47610678
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  47610517 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 47610615  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||| || | || |||| ||||||||||| |||||||||||||  |||||||||||||||||||    
T  47610616 tttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 22776746 - 22776913
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  ||||| ||||||||||||  ||||  |||||    ||||||||||||||||||||||||| | |||||||    
T  22776746 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggcc-aaaattg 22776843  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| |||| |||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  22776844 tagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcc 22776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 47609861 - 47609697
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||  | ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||| |||| |||| ||    
T  47609861 tacacatgtggcatgccaaattggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaa-ttgtggt 47609763  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  47609762 tttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcc 47609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 51470136 - 51469972
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||| | ||||||| ||    
T  51470136 tacacatgtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttagggggg-ttaaattgtggt 51470038  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||    
T  51470037 tttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 7758569 - 7758402
Alignment:
Q  222 aattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgt 321  Q
    ||||| |||||||||||||||  | || ||||||| |||||||||||   |||| |||||    | |||||||| ||| |||||||||| | ||||||||    
T  7758569 aattatacacgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttaggggg-caaaaattgt 7758471  T
Q  322 agtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||| | || |||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  7758470 agtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 7758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 390
Target Start/End: Original strand, 46721173 - 46721321
Alignment:
Q  241 caaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatgggg 340  Q
    |||||||| ||||||| |||||||||||   | || |||||    |||||||||||||| |||||||||  ||||||||||||||||||| |||| ||||    
T  46721173 caaatcagcgttgacttggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttagggga-ctaaaattgtagtttttgtacataggggg 46721271  T
Q  341 tcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    | ||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  46721272 ttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcc 46721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 51470399 - 51470555
Alignment:
Q  232 gtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt 331  Q
    ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| || ||||| ||||||||| ||| ||||||| ||||| ||     
T  51470399 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgct-aaattgtggttttggta 51470497  T
Q  332 catatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    | || ||| || ||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  51470498 cttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagcc 51470555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 390
Target Start/End: Original strand, 29932661 - 29932799
Alignment:
Q  250 gttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattg 349  Q
    ||||||| |||||||||||   |||| ||| | |||||||||||| |||| ||||| |||| | ||||||||||||||||| | || |||| ||||||||    
T  29932661 gttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtc-aaaattgtagtttttgtactta-ggggccaaaattg 29932758  T
Q  350 caactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| |||||||||||||  ||||||||||||||||||||||    
T  29932759 caagtttttgaaagttagagggggaaaagtgcactttagcc 29932799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 390
Target Start/End: Original strand, 29981815 - 29981953
Alignment:
Q  250 gttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattg 349  Q
    ||||||| |||||||||||   |||| ||| | |||||||||||| |||| ||||| |||| | ||||||||||||||||| | || |||| ||||||||    
T  29981815 gttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtc-aaaattgtagtttttgtactta-ggggccaaaattg 29981912  T
Q  350 caactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| |||||||||||||  ||||||||||||||||||||||    
T  29981913 caagtttttgaaagttagagggggaaaagtgcactttagcc 29981953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 534673 - 534499
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||| ||||||||||||||||| ||  |||  ||||||||||   |||  |||||    ||||||  |||||| |||||||||| | |    
T  534673 aatggttaattacacatgtggcatgccaaatcagcgtacacttagtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggcc-a 534575  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||| |||| | |||||||||||||| ||||||| |||||  |||| |||||||||||||||||    
T  534574 aaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcc 534499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 29931391 - 29931226
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    |||||||||||| |||||| |   | |||||||  ||||||||||   |||| ||| | ||||||||||||| ||| |||||||||| | ||||||||||    
T  29931391 ttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggcc-aaaattgtag 29931293  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||   || ||||  |||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  29931292 tttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29931226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 29980545 - 29980380
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    |||||||||||| |||||| |   | |||||||  ||||||||||   |||| ||| | ||||||||||||| ||| |||||||||| | ||||||||||    
T  29980545 ttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggcc-aaaattgtag 29980447  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||   || ||||  |||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  29980446 tttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 55191967 - 55192095
Alignment:
Q  260 tcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttg 359  Q
    |||||||||  |||||||| ||  |||||||||||| |||||||| | ||||| ||||||||||||||||| | ||  ||| ||||||||||| ||||||    
T  55191967 tcaaaattgacaaaaatgatcaaaattgcaaaggggttaattctt-gaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttg 55192065  T
Q  360 aaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||| | ||||||||||    
T  55192066 aaagttaaggggggaaaa-tacactttagcc 55192095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 19984925 - 19984849
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 46720044 - 46719941
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| ||||||| |||||| ||  ||||||||||||||||| | |||| |||| |||||| |||||||||| |||||||||||||||||| |||||||    
T  46720044 tgcaaatgggctaaatcttagagga-ctaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactt 46719946  T
Q  386 tagcc 390  Q
    |||||    
T  46719945 tagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 49216321 - 49216247
Alignment:
Q  316 aattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  49216321 aattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 23770405 - 23770505
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||| |||| |||  |||||||| |||||||| ||| |||||||| ||||| |||||||    
T  23770405 tgcaaaggggttaaatcttagggg-gctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcactt 23770503  T
Q  386 ta 387  Q
    ||    
T  23770504 ta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 52104828 - 52104759
Alignment:
Q  51 attttctggattttggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaaggagattaa 120  Q
    ||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||||    
T  52104828 attttctgggttttggttgagaagaagatgaagttgttaagaaaatgaaggagaagatgaatgagattaa 52104759  T

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Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 54539859 - 54539755
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||| | ||||| |||||||||  | |||||||||||||||||   || ||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  54539859 ttgcaaatgagctaaatcttaggggatc-aaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcact 54539761  T
Q  385 ttagcc 390  Q
    ||||||    
T  54539760 ttagcc 54539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 53616011 - 53616114
Alignment:
Q  283 tattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||| |||| ||  | |||||| ||| | ||| ||||||||||| |||||||||||    
T  53616011 tattgcaaaggagctaattctt-ggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgca 53616109  T
Q  383 cttta 387  Q
    |||||    
T  53616110 cttta 53616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 7267747 - 7267647
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| | |||||| |||||||||| | ||||||||||||| ||| | || |||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  7267747 ttgcaatgaggctaaatcttagggggcc-aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaag-ggggaaaagtgcact 7267650  T
Q  385 tta 387  Q
    |||    
T  7267649 tta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 47615596 - 47615649
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47615596 ggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 8876001 - 8875906
Alignment:
Q  294 ggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||||| | ||||||||||||||||| |||| ||||  ||||||||| ||||||  || |||||||| ||||||||||||||||||    
T  8876001 ggctaaatcttagggggcc-aaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 19986004 - 19986173
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  |||||| |||||||||||    |||||||||    |||||||||| ||| |||||| ||| | |||||||    
T  19986004 taattacacacgtggcatgccacgtaggcattgact-ggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtc-aaaattg 19986101  T
Q  321 tagtttttgttcatatg--gggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| | |||| |  ||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  19986102 tagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 51347436 - 51347271
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||| || |||||  |  | ||||||| |||||| |||| | ||||||| ||   ||||||| ||| ||| |||||||||| | |||||||    
T  51347436 taattacacacgtagcctgccacgtatgcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtc-aaaattg 51347338  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |  ||||||||||||  ||  ||||||||||||||||| ||| ||||| |||| |||||||||||||    
T  51347337 tcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 12700249 - 12700175
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||| ||||||||||| |||||||||||||  ||||| ||||||||||||||||    
T  12700249 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcc 12700175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 40426796 - 40426877
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaatt-gcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||| ||||||||| |||||||  ||| |||| | ||||| |||||||||| ||||||||||||||||||||||||||||    
T  40426796 gggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 53614925 - 53614819
Alignment:
Q  282 ctattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgc 381  Q
    |||||||||| ||||||||||||  |||||| ||||||||||||||| |  |||  ||   ||||||| || ||||||||||||||||| |||||| |||    
T  53614925 ctattgcaaatgggctaattctt--gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgc 53614828  T
Q  382 actttagcc 390  Q
    |||||||||    
T  53614827 actttagcc 53614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 12703498 - 12703600
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    ||||| |||||||| || ||||||| | ||||||||||||||||| | || |||| ||||||| ||| |||||||||||| || ||| ||||||||||||    
T  12703498 tgcaatggggctaaatcatagggggcc-aaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcactt 12703595  T
Q  386 tagcc 390  Q
    |||||    
T  12703596 tagcc 12703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 23769933 - 23769857
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||  ||||  || | ||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  23769933 aaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagcc 23769857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 47614288 - 47614185
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    ||||||| |||||| |||||||||| | |||||||| |||||  | | || |||| ||||||||||| |||||||||||||  |||| ||||||||||||    
T  47614288 tgcaaagaggctaaatcttagggggcc-aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactt 47614190  T
Q  386 tagcc 390  Q
    |||||    
T  47614189 tagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 53901406 - 53901487
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| || |||||||||||||| | || || ||||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  53901406 gggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcc 53901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 5029682 - 5029783
Alignment:
Q  287 gcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 386  Q
    |||| ||||||||||||||||||||  |||||||| ||||| || | || | || |||||||||||  ||||||||| || |||||||||||||||||||    
T  5029682 gcaatggggctaattcttagggggga-aaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagata-ggggggaaaagtgcacttt 5029779  T
Q  387 agcc 390  Q
    ||||    
T  5029780 agcc 5029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 387
Target Start/End: Original strand, 7268761 - 7268924
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| |||||  | ||  ||||| |||||||||||| | |||| ||  |  ||||||| ||| |||| ||||||| || | |||||||    
T  7268761 taattacacacgtggcgtgccacgtaagcattgac-cggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggcc-aaaattg 7268858  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||| | | | || | || ||||||||||| |||||||||||| |||||||||||||||||||||    
T  7268859 tagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 389
Target Start/End: Complemental strand, 8456642 - 8456479
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    |||||||||||||||||||     | ||||||| |||||||||||   |||| || ||   |||||| | |||||| |||||||||| | ||||||||||    
T  8456642 ttacacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggcc-aaaattgtag 8456544  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||||||   || |||  ||||||||||| ||||||||| || |||||| ||||||||||||||||    
T  8456543 tttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 34019170 - 34019227
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaagggg 371  Q
    ||||||||||| ||||| | || |||||||||||||||| ||||||||||||||||||    
T  34019170 aaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagggg 34019227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 386
Target Start/End: Complemental strand, 24516562 - 24516464
Alignment:
Q  287 gcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 386  Q
    ||||||| ||||| ||||| |||| | ||||||||||||||| | | || || | ||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  24516562 gcaaaggagctaaatcttaaggggcc-aaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 28262275 - 28262193
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  28262275 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta-ggggggaaaagtgcactttagcc 28262193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 28263129 - 28263212
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||| ||||||| |||||||||||||||||||||||    
T  28263129 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcc 28263212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 39844178 - 39844295
Alignment:
Q  271 aaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt--catatggggtcaaaattgcaactttttgaaagttaag 368  Q
    ||||| ||| |||||||||||||||||||||  ||| ||| | ||| ||||  ||||| ||  |||| ||||| |||||||||||||||| ||| |||||    
T  39844178 aaaaaagactactattgcaaaggggctaatttatagagggcc-aaatttgtcatttttttttacataaggggttaaaattgcaactttttaaaacttaag 39844276  T
Q  369 gggggaaaagtgcacttta 387  Q
    |||| ||| ||||||||||    
T  39844277 ggggaaaaggtgcacttta 39844295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 52276387 - 52276304
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  52276387 gggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcc 52276304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 52281565 - 52281648
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  52281565 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcc 52281648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 22775828 - 22775783
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||    
T  22775828 ggggccaaaattgcaactttttgaaagtt-aggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 52839141 - 52839037
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| | |||| |||| ||||||||| ||||| || | ||  ||||||||||| ||| |||||| ||||||  ||||||||| ||||||    
T  52839141 ttgcaatggggctaaattttagagggg-taaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcact 52839043  T
Q  385 ttagcc 390  Q
    ||||||    
T  52839042 ttagcc 52839037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 52840601 - 52840705
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| |||||||||| | |||||||| |||||  |   || || | ||||||||||| ||||||||||||| ||| ||||||| |||||    
T  52840601 ttgcaatggggctaaatcttagggggac-aaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcact 52840699  T
Q  385 ttagcc 390  Q
    ||||||    
T  52840700 ttagcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 535835 - 535883
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||||||||||| ||| |||||||| ||||||||||    
T  535835 caaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 6170349 - 6170281
Alignment:
Q  313 taaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgc 381  Q
    |||||||||| ||||||| | || ||| |||||||||||| ||||||||||||| ||| | ||||||||    
T  6170349 taaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 18442714 - 18442630
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta-aggggggaaaagtgcactttagcc 390  Q
    |||||| ||||||||||||||  | |||  |||| |||||| ||||| ||||||||||||  |||||| ||||||||||||||||    
T  18442714 gggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcc 18442630  T

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Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 18456081 - 18456165
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta-aggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| ||||||||||||  |||||||||||||||||||||||    
T  18456081 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagcc 18456165  T

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Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 19487788 - 19487704
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta-aggggggaaaagtgcactttagcc 390  Q
    |||||| ||||||||||||||  | |||  |||| |||||| ||||| ||||||||||||  |||||| ||||||||||||||||    
T  19487788 gggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcc 19487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 25336406 - 25336358
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||| |||||||| |||||||| |||||||||| |||||||    
T  25336406 caaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagcc 25336358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 39843098 - 39843054
Alignment:
Q  343 aaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||    
T  39843098 aaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 5001275 - 5001200
Alignment:
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| ||||| || | || |||| |||||||||||  ||||||||| || ||| |||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcc 5001200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 8339023 - 8338940
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||   ||||| || ||| ||||||||||| ||||| ||||||||  || |||| ||||||||||||||||||    
T  8339023 gggggccaaaattgccattttttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 11670755 - 11670704
Alignment:
Q  61 ttttggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaag 112  Q
    |||||||||||||||| || ||| |||| |||||||||| ||||||||||||    
T  11670755 ttttggttgagaagaagatgaagttgttgagaaaatgaatgagaagatgaag 11670704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 26722699 - 26722612
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattg-ctaaaaatgaccactattgcaaaggggctaattcttagggg 309  Q
    ||||||||||||||||||||||  |  | ||||||| ||||||||||| ||||||  |  |||||||||||||||||||| || ||||||    
T  26722699 taattacacacgtggcatgccacttaggcgttgactaggtcaaaattggctaaaa--ggtcactattgcaaaggggctaaatcatagggg 26722612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 26723795 - 26723882
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattg-ctaaaaatgaccactattgcaaaggggctaattcttagggg 309  Q
    |||||||||| |||||||||||  | || ||||||| ||||||||||| ||||||  |  |||||||||||||||||||| || ||||||    
T  26723795 taattacacatgtggcatgccacttaagcgttgactaggtcaaaattgactaaaa--ggtcactattgcaaaggggctaaatcatagggg 26723882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 54987005 - 54987103
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||| ||||| |||||| ||| | |||||| |||||||| | |||| |||   ||||| |||||||||||||| |||  |||||||||||||||||    
T  54987005 tgcaaaggagctaaatcttagagggtc-aaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcactt 54987101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 6249686 - 6249633
Alignment:
Q  313 taaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    |||||||||||||||||| | || ||| | |||||||||| |||||||||||||    
T  6249686 taaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 31039253 - 31039293
Alignment:
Q  350 caactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||| ||| |||||||| ||||||||||||||||||    
T  31039253 caactttttaaaacttaaggggtgaaaagtgcactttagcc 31039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 18902 - 18730
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||| || | |    
T  18902 aatggttaattacacacgtggcatgccaaatcagcgttgactcggccaaaattgctaaaaaggaccactattgtaaaggggttaattcttaggaggtc-a 18804  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  18803 aaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 215 - 377
Target Start/End: Original strand, 19337 - 19498
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||| ||||||||||||| ||||||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||||||| | ||| |||    
T  19337 aatggttaattatacacgtggcatgctaaatcagcgttgactcagtcaaaattgct-aaaaggaccactattgcaaaagggctaattctt-gagggacta 19434  T
Q  315 aaattgtagtttttgttcatatggggtcaaaa-ttgcaactttttgaaagttaaggggggaaaa 377  Q
    ||||| || |||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||    
T  19435 aaattataatttttgttcataggggatcaaaatttgcaactttttgaaagttaaggggagaaaa 19498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 49370 - 49534
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    ||||||| |||||||||||||||| ||||| | |||||||||||   |||| |||||   ||||||||| ||||| |||||||||| | |||||||||||    
T  49370 tacacacatggcatgccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtc-aaaattgtagt 49468  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| || ||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  49469 ttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 49534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 390
Target Start/End: Complemental strand, 39474 - 39344
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    ||||||||||   |||| |||||||||||||||||||||||  | || |||  ||||| ||| | ||||  || |||  ||| |||||||| ||||||||    
T  39474 gtcaaaattggacaaaaagaccactattgcaaaggggctaaaacataaggga-ctaaatttgcaattttgtttaataaagggccaaaattgtaacttttt 39376  T
Q  359 gaaagttaaggggggaaaagtgcactttagcc 390  Q
     ||| |||||||||||||||||||||||||||    
T  39375 aaaacttaaggggggaaaagtgcactttagcc 39344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 390
Target Start/End: Original strand, 43560 - 43611
Alignment:
Q  339 ggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  43560 ggtcaaaattgcaactttttgaaacttaagggggaaaaactgcacttaagcc 43611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 3227531 - 3227695
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||| ||| ||||||| ||    
T  3227531 tacacatgtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgct-aaattgtggt 3227629  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3227630 tttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 3227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 225 - 388
Target Start/End: Complemental strand, 17781825 - 17781663
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||| |||| |||| ||    
T  17781825 tacacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaa-ttgtggt 17781727  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    ||| || | || |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  17781726 tttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 31949486 - 31949322
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  31949486 tacacatgtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 31949388  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||    
T  31949387 tttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 31949322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 31949746 - 31949903
Alignment:
Q  232 gtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt 331  Q
    ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||| ||| ||||||| ||||| ||     
T  31949746 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgct-aaattgtggttttggta 31949844  T
Q  332 catatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
      || |||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  31949845 tttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcc 31949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 11658547 - 11658379
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| ||||| ||  | ||||||   ||||||||||  | ||| ||| |||||| ||||||||||||||||| | ||| | |||||||    
T  11658547 taattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattacaaaggggctaattctt-gagggaccaaaattg 11658449  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| |||| ||||  |||||||||  ||||||||||||||||||||||||||||| |||||||    
T  11658448 tagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcc 11658379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 47525304 - 47525468
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  47525304 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 47525402  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||  | | || ||||  |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  47525403 tttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 389
Target Start/End: Complemental strand, 3227271 - 3227109
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||| ||||||| ||||||| ||    
T  3227271 tacacatgtggcatgccaaatcagcgttgactaggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggct-aaattgtggt 3227173  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    ||| || | || |||| ||||||||||| ||||||||| || ||||||| |||||||||||||||    
T  3227172 tttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 387
Target Start/End: Original strand, 128545 - 128699
Alignment:
Q  232 gtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt 331  Q
    |||||||||||||||||  |||||| ||||||||||| | |||| |  ||   |||||| |||||| | |||||||||||||||| |||| ||||| ||     
T  128545 gtggcatgccaaatcagcattgactaggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaa-ttgtggttttggta 128643  T
Q  332 catatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    | || |||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  128644 cttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 11662523 - 11662649
Alignment:
Q  260 tcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttg 359  Q
    |||||||||  | ||| ||| |||||||||||||||||||||||| ||||||| |||||| |||||||||| ||||  | |  |||||||||| ||||||    
T  11662523 tcaaaattgacataaaggactactattgcaaaggggctaattctt-ggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttg 11662621  T
Q  360 aaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||||||||||| |||||||||    
T  11662622 aaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 127492 - 127337
Alignment:
Q  232 gtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt 331  Q
    ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   ||||||  ||||||| ||||| ||||||| ||||||| ||||| ||     
T  127492 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatctta-gggggct-aaattgtggttttggta 127395  T
Q  332 catatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    | || |||  ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  127394 cttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 127337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 30439285 - 30439458
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| ||||||||||  ||||||| ||| ||||||||||||  ||||||||||   |||||||||     |||||||||||||| ||||| |||| |||    
T  30439285 aatggttaattacacatatggcatgtcaagtcagtgttgactaagtcaaaattgagcaaaatgaccgaaggtgcaaaggggctaaatctta-ggggacta 30439383  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||  |||| |   ||||||| | ||||||||||||||||||||| | ||||||||||||||||    
T  30439384 aaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaaggggag-aaagtgcactttagcc 30439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 31659727 - 31659622
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaagggggg-aaaagtgcac 383  Q
    |||||| |||||||| |||||||||| | ||||||||||||||||| | || ||||||||||||| || ||||||||||||| |||||| ||||||||||    
T  31659727 ttgcaatggggctaaatcttagggggcc-aaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcac 31659629  T
Q  384 tttagcc 390  Q
    |||||||    
T  31659628 tttagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 42886284 - 42886384
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||   || |||||||||||||||| ||||||||||||| | || |||||||||||||    
T  42886284 tgcaaatgggctaaatcttagggg-gctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcactt 42886382  T
Q  386 ta 387  Q
    ||    
T  42886383 ta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 18371527 - 18371424
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| | ||||| |||||||||| | ||||||||||||||||| | || |||| ||||||||||| ||||||||||||| | ||||||||||||||||    
T  18371527 tgcaaatgtgctaaatcttagggggcc-aaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactt 18371429  T
Q  386 tagcc 390  Q
    |||||    
T  18371428 tagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 22630470 - 22630553
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||||   || |||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  22630470 gggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcc 22630553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 17782558 - 17782654
Alignment:
Q  293 gggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| |||||||||||||||| |||| ||||| || | || |||| ||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaa-ttgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 17782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 21505517 - 21505416
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| ||||| |||| | |||||||||||||||||  ||  |||| |||||| ||||||||||||||||||  |||||||||||||||||    
T  21505517 tgcaaaggggctaaatcttatggggtc-aaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcactt 21505421  T
Q  386 tagcc 390  Q
    |||||    
T  21505420 tagcc 21505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 48934896 - 48935004
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    ||||||||||| |||||||||||| ||||  | |||||| |||||||||| | ||  ||||||||||| ||| ||||||||||||| ||| |||||| ||    
T  48934896 actattgcaaatgggctaattcttgggggatc-aaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatg 48934994  T
Q  381 cactttagcc 390  Q
    ||||||||||    
T  48934995 cactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 7500557 - 7500455
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | |||||||| |||| | | | ||  || |||||||||||| ||||||||||||||| ||||||||||||||||    
T  7500557 tgcaaaggggctaaatcttagggggcc-aaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactt 7500460  T
Q  386 tagcc 390  Q
    |||||    
T  7500459 tagcc 7500455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 377
Target Start/End: Original strand, 18372457 - 18372544
Alignment:
Q  288 caaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaa 377  Q
    |||||||||||| |||||||||| | ||||||||||||||||| | || |||| ||||||||||| ||||||||| || |||||||||||    
T  18372457 caaaggggctaaatcttagggggcc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatt-aggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 22629589 - 22629483
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaag---gggggaaaagtgca 382  Q
    |||||||||||||| |||||||||| | ||||||||||||||||| | || | || ||||||| ||| ||||||||| |||||   ||||||||| ||||    
T  22629589 tgcaaaggggctaaatcttagggggcc-aaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgca 22629491  T
Q  383 ctttagcc 390  Q
    ||||||||    
T  22629490 ctttagcc 22629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 7501850 - 7501953
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||  ||||| |||| | |||||||| |||||  | | || |||| ||||||||||| |||||||||||||  |||||||||||||||||    
T  7501850 tgcaaaggggctacatcttaaggggcc-aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactt 7501948  T
Q  386 tagcc 390  Q
    |||||    
T  7501949 tagcc 7501953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 20163585 - 20163657
Alignment:
Q  318 ttgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||| |||| || | ||||||||||| ||||||||||||| ||| ||| |||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcc 20163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 30439085 - 30439181
Alignment:
Q  17 agattgttgttgttgttgaaaagattcatgtaatattttctggatttt-ggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaag 112  Q
    ||||||||||||||||||||| ||||| |||  |||||  || ||||| |||||||||||| || ||| ||||| ||||||||| ||||||||||||    
T  30439085 agattgttgttgttgttgaaacgattcctgttgtatttgatgaatttttggttgagaagaagatgaagttgttatgaaaatgaatgagaagatgaag 30439181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 385
Target Start/End: Original strand, 14999153 - 14999249
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||| | | |||||||||||||||||   || ||||||||||||||||  |||||||| || |||||||||||||||||||    
T  14999153 tgcaaaggggctaaatcttagggcgcc-aaaattgtagtttttgtatttagggggtcaaaattgcaa-gttttgaaaatt-aggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 31661027 - 31661110
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| |||||||| |||||||||| | ||  ||||||||||||||| |||||||||||||  | ||| ||||||||||||||||    
T  31661027 ggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcc 31661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 47369884 - 47369781
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| ||||| |||| | |||||| |||||||||| | |||| ||  |||||||||| ||||||||||||| |||   ||||||||| ||    
T  47369884 tgcaaaggggctaaatcttaaggggcc-aaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattt 47369786  T
Q  386 tagcc 390  Q
    |||||    
T  47369785 tagcc 47369781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 390
Target Start/End: Original strand, 32253448 - 32253499
Alignment:
Q  339 ggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||| || ||||||| ||||||||| |||||||||    
T  32253448 ggtcaaaattgcaactttttgcaacttaagggtggaaaagtgtactttagcc 32253499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  316 aattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    |||||| ||||| || | || |||| ||||||||||| |||||||||||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 390
Target Start/End: Original strand, 34174010 - 34174083
Alignment:
Q  316 aattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| ||||| || | || |||| |||||||||||  ||||||||| || |||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcc 34174083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 39182156 - 39182237
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| ||||||||  ||||| || ||| ||||||||||||||||| |||| ||| ||| |||| |||||||||| |||||||    
T  39182156 ggggccaaaattgtcattttt-ttaatagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcc 39182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 20636869 - 20636922
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||| ||||||||  || |||| ||||||||||||||||||    
T  20636869 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 20636922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 21508457 - 21508503
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| |||||||||||||||||  |||||||| ||||||||||||    
T  21508457 caaaattgaaactttttgaaagttaa--ggggaaaaatgcactttagcc 21508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 27869249 - 27869196
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||| ||||||||  || |||| ||||||||||||||||||    
T  27869249 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 48933743 - 48933690
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaa 367  Q
    |||||||||||||||||| ||| ||| |||||||||||| ||||| ||| ||||    
T  48933743 aaaattgtagtttttgtttataagggatcaaaattgcaagtttttaaaatttaa 48933690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 5111478 - 5111442
Alignment:
Q  354 tttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  5111478 tttttgaaacttaaggggtgaaaagtgcactttagcc 5111442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 9822330 - 9822370
Alignment:
Q  350 caactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||| ||| |||||||| ||||||||||||||||||    
T  9822330 caactttttaaaacttaaggggtgaaaagtgcactttagcc 9822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 10724255 - 10724295
Alignment:
Q  350 caactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||| ||| |||||||| ||||||||||||||||||    
T  10724255 caactttttaaaacttaaggggtgaaaagtgcactttagcc 10724295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 47524663 - 47524623
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaa 265  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  47524663 tacacatgtggcatgccaaatcagcgttgacttggtcaaaa 47524623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 27437992 - 27437828
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    ||||||| |||||||||||||||| ||||| | |||||||||||   |||| |||||   ||||||||| ||||| |||||||||| | |||||||||||    
T  27437992 tacacacatggcatgccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtc-aaaattgtagt 27437894  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| || ||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27437893 ttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 27437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 8659429 - 8659265
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  8659429 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 8659331  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  8659330 tttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 8659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 3721776 - 3721612
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||| |||| ||||| || | ||    
T  3721776 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaa-ttatggt 3721678  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  3721677 tttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 3721612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 8660141 - 8660304
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||| | |||| || ||   |||||| || ||||| |||||||||||||||| |||| ||    
T  8660141 tacacatgtggcatgcgaaatcagcgttgacttggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaa-ttgtggt 8660239  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||||||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  8660240 tttggtactta-ggggtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 8660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 232 - 387
Target Start/End: Original strand, 34834523 - 34834677
Alignment:
Q  232 gtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt 331  Q
    ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| |||||||||||||||| |||| |||||  |     
T  34834523 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaa-ttgtggttttgata 34834621  T
Q  332 catatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    | || | | |||||||||||| ||||||||||||| || |||||||||||||||||    
T  34834622 cttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 16704522 - 16704598
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcc 16704598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 8822798 - 8822894
Alignment:
Q  293 gggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| |||||||||||||||| |||| ||||| || | || |||||||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  8822798 gggctaaatcttaggggggctaaa-ttgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 387
Target Start/End: Original strand, 1829572 - 1829701
Alignment:
Q  257 cggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttt 356  Q
    ||||||||||||   ||||||||||    |||||||||||||| |||||||||| | ||||||||||||||| | | || |||||||||||||||| |||    
T  1829572 cggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggcc-aaaattgtagtttttatacttagggggtcaaaattgcaagttt 1829670  T
Q  357 ttgaaagttaaggggggaaaagtgcacttta 387  Q
    || ||||||| ||||  ||||||||||||||    
T  1829671 ttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 6842306 - 6842384
Alignment:
Q  312 ctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||  |||| |||| ||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  6842306 ctaaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 10784697 - 10784592
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggg-gggaaaagtgcac 383  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||| | | || ||||| |||||||||| ||||| ||||||||||| |||||||||||||    
T  10784697 ttgcaaaggggctaaatctttgggggcc-aaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcac 10784599  T
Q  384 tttagcc 390  Q
    |||||||    
T  10784598 tttagcc 10784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 8821977 - 8821873
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| || ||||| |||||||||||||||| |||| ||||| || | || |||| ||||||||||| |||||||||||||  ||||||||||||||||    
T  8821977 ttgcaatggagctaaatcttaggggggctaaa-ttgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcact 8821879  T
Q  385 ttagcc 390  Q
    ||||||    
T  8821878 ttagcc 8821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 29473182 - 29473082
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||||||||| ||||||| || |||| ||||||||  |||||||||||| ||   ||||||||||||||||| ||| ||||||||||||||||||||    
T  29473182 attgcaaaggggccaattctt-ggagggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcac 29473084  T
Q  384 tt 385  Q
    ||    
T  29473083 tt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 30495692 - 30495797
Alignment:
Q  283 tattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    ||||||||| ||||||| |||||| ||||| ||||||||  ||||||| |||| ||| | ||||| ||||||||||||||||||  |||| |||||||||    
T  30495692 tattgcaaatgggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta--ggggaaaaagtgca 30495789  T
Q  383 ctttagcc 390  Q
    ||||||||    
T  30495790 ctttagcc 30495797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 27322067 - 27322168
Alignment:
Q  287 gcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 386  Q
    |||||||||||||||||||||||||  |||||||| ||||| || | || |||| |||||||||||  ||||||||| | ||||||||||||||||||||    
T  27322067 gcaaaggggctaattcttagggggg-gaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttt 27322164  T
Q  387 agcc 390  Q
    ||||    
T  27322165 agcc 27322168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 7315047 - 7314880
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| |||||  |  | ||||| |  ||||||||||   ||||||||||    |||||||||||||| |||||||||| | |||||||    
T  7315047 taattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtc-aaaattg 7314949  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    | |||||  | | || |||| ||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  7314948 ttgttttgatactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 7316342 - 7316395
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7316342 ggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 14822443 - 14822360
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| ||||||||||||| | | | ||||||| ||||||||||| ||||||||| |||||||| |||||||||||| |||||    
T  14822443 gggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 10785884 - 10786000
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    |||||||||| |||||| || ||   ||||||||||||||| ||||| ||||  |||||||||||||||||| | || ||||| |||||||||| |||||    
T  10785884 gtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggt-taaaattgtagtttttgtacttagggggttaaaattgcaaattttt 10785982  T
Q  359 gaaagttaaggggggaaaa 377  Q
     |||||| |||||||||||    
T  10785983 aaaagtt-aggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 3333023 - 3333127
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||||||||||| | |||| |||  |||||||||||||||||| |||| |||| |||||| |||||||||| ||| |||   ||||||||||||| |    
T  3333023 ttgcaaaggggctaaattttagagggt-taaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaat 3333121  T
Q  385 ttagcc 390  Q
    ||||||    
T  3333122 ttagcc 3333127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 390
Target Start/End: Original strand, 3722556 - 3722608
Alignment:
Q  338 gggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  3722556 gggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcc 3722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 16703650 - 16703570
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||||   ||| || |||||||||||| |||||||||| ||  ||||||||||||||||||||||    
T  16703650 gggggctaaaattgtagtttttgtatttat-ggatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcc 16703570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 16415575 - 16415634
Alignment:
Q  331 tcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| ||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  16415575 tcataaggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 16415634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 26717132 - 26717183
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  26717132 ggggtcaaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 390
Target Start/End: Original strand, 27447884 - 27448014
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    ||||||||||   |||| |||||||||||||||||||||||  | || |||  ||||| ||| | ||||  || |||  ||| |||||||| ||||||||    
T  27447884 gtcaaaattggacaaaaagaccactattgcaaaggggctaaaacataaggga-ctaaatttgcaattttgtttaataaagggccaaaattgtaacttttt 27447982  T
Q  359 gaaagttaaggggggaaaagtgcactttagcc 390  Q
     ||| |||||||||||||||||||||||||||    
T  27447983 aaaacttaaggggggaaaagtgcactttagcc 27448014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 26575051 - 26575131
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    ||||||||| | ||| |||||||||| | ||||||||||||||||| | || ||||| |||||||||| |||||||||||||    
T  26575051 ttgcaaaggagttaaatcttagggggcc-aaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 17496901 - 17496793
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaag----gggggaaaagtgc 381  Q
    ||||||| || ||| |||||||||||| ||||||| ||||||||| | ||  |||| ||||||| || ||||||||||||| |    ||||||||| |||    
T  17496901 tgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagttagggggagggggaaaaatgc 17496802  T
Q  382 actttagcc 390  Q
    |||||||||    
T  17496801 actttagcc 17496793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 20973294 - 20973400
Alignment:
Q  283 tattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    ||||| ||| |||||||||| ||||||| | ||| ||||  ||||  |||||| || || ||||| ||||||| |||||| |||| ||||||||||||||    
T  20973294 tattgtaaatgggctaattcatagggggtc-aaatttgtcattttatttcatagggtgttaaaatcgcaacttattgaaacttaaagggggaaaagtgca 20973392  T
Q  383 ctttagcc 390  Q
    ||||||||    
T  20973393 ctttagcc 20973400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 390
Target Start/End: Complemental strand, 27443801 - 27443750
Alignment:
Q  339 ggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  27443801 ggtcaaaattgcaactttttgaaacttaagggggaaaaactgcacttaagcc 27443750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 3722460 - 3722534
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaa 299  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| ||||||||    
T  3722460 tacacatgtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaa 3722534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 12350898 - 12350823
Alignment:
Q  288 caaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtt 365  Q
    |||||||||||| ||||| ||||| |||||||||||||||| | |||| |||||||||||||||| ||| | ||||||    
T  12350898 caaaggggctaaatctta-gggggttaaaattgtagtttttatacata-ggggtcaaaattgcaagtttattaaagtt 12350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 14823593 - 14823677
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggg-gaaaagtgcactttagcc 390  Q
    |||||| ||||||||||||| ||| | || ||||  |||||||||| ||||| ||| |||||||||  |||||||||||||||||    
T  14823593 gggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcc 14823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 27318418 - 27318315
Alignment:
Q  287 gcaaaggggctaattcttaggggggcta-aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||||||||||||||    ||||||| ||||| || | || |||| |||||||||||  ||||||||| | |||||| ||| ||||||||    
T  27318418 gcaaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-agggggaaaaggtgcactt 27318320  T
Q  386 tagcc 390  Q
    |||||    
T  27318319 tagcc 27318315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 365
Target Start/End: Complemental strand, 34831066 - 34830927
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| |||||| ||||||| ||  |||||| ||||||||||| | |||  |||||   |||||| | |||||| ||||||||||||| ||||||| ||    
T  34831066 tacacatgtggcaggccaaattagcattgactaggtcaaaattggtcaaagggaccaaagttgcaatgtggctaaatcttaggggggct-aaattgtggt 34830968  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagtt 365  Q
    ||| || | || |||| ||||  ||||| ||||||||||||    
T  34830967 tttggtacttagggggccaaatatgcaaatttttgaaagtt 34830927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 12382638 - 12382811
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaatt-gctaaaaatgaccactattgcaaaggggctaattcttaggggggct 313  Q
    ||||| ||||||||||||||||||||||||| || ||||||   ||||||||| ||| |||| |||||    |||||| ||| ||| |||| ||||  |     
T  12382638 aatggttaattacacacgtggcatgccaaataagcgttgaccaagtcaaaattagct-aaaaggaccaaagatgcaaaagggttaaatctttggggatc- 12382735  T
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||||| |||||||  | | || |||||||||||| ||| ||||| ||| |||  || ||||||||||||||||||    
T  12382736 aaaattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

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Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 390
Target Start/End: Complemental strand, 26574751 - 26574619
Alignment:
Q  256 tcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactt 355  Q
    |||||||||||||  ||||| || ||   ||||||||||||||| ||||| |||  | |||  |||||||||||| | ||  || |||||||||||| ||    
T  26574751 tcggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaa--tgtagtttttgtacttagaggttcaaaattgcaagtt 26574654  T
Q  356 tttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||  || || ||| ||||||||||||    
T  26574653 tttgaaagttagaggtgggaaattgcactttagcc 26574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 5658860 - 5658759
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||| ||||||| ||||| |||  | ||||||||||||||||| |||| ||    ||||||  |||||||| ||| |||||||||||||| ||||||    
T  5658860 ttgcaaatgggctaaatcttaagggatc-aaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcact 5658762  T
Q  385 tta 387  Q
    |||    
T  5658761 tta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 6840268 - 6840194
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| ||||||||||   || |||| |||||| |||||||||||||| |||||||||  ||||||||||| ||||    
T  6840268 aaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaaggggg--aaagtgcacttcagcc 6840194  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 13345603 - 13345552
Alignment:
Q  338 gggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| ||||||||| |||| ||||||||| ||||||| |||||||||    
T  13345603 gggtcaaaatcgcaacttttggaaacttaaggggg-aaaagtgaactttagcc 13345552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 52827511 - 52827347
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||| |||| |||| ||    
T  52827511 tacacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaa-ttgtggt 52827413  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  52827412 tttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 52827347  T

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Target: chr1; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 41364992 - 41364829
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | ||||||||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  41364992 tacacatgtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 41364894  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| ||   || |||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  41364893 tttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 241 - 390
Target Start/End: Complemental strand, 51684514 - 51684366
Alignment:
Q  241 caaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatgggg 340  Q
    |||||||| ||||||| |||||||||||   |||| |||||    |||||||||||||| |||||||||| | ||||||||||||||| | |||| ||||    
T  51684514 caaatcagcgttgacttggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggcc-aaaattgtagtttttatacataggggg 51684416  T
Q  341 tcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51684415 ccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 35066997 - 35067103
Alignment:
Q  283 tattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    ||||||||||||||||| | |||||||| | |||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||    
T  35066997 tattgcaaaggggctaaatattagggggcc-aaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgca 35067095  T
Q  383 ctttagcc 390  Q
    ||||||||    
T  35067096 ctttagcc 35067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 24422965 - 24422800
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    ||||||||||||||||||| |   | |||||||  ||||||||||   |||| || ||   |||||| |||||||| |||||||||| | ||||||||||    
T  24422965 ttacacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggcc-aaaattgtag 24422867  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| | || |||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  24422866 tttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcc 24422800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 387
Target Start/End: Original strand, 52828007 - 52828168
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  52828007 tacacatgtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 52828105  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||| || | || || | ||||||||||| ||||||||| |||  |||||||||||||||||||    
T  52828106 tttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 35595119 - 35595294
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |||||||||||   |||| |||||    |||||||||||||| |||||  ||||| |    
T  35595119 aatggttaattacacacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta--ggggcca 35595216  T
Q  315 aaattg-tagtttttgttcatatggggtcaaaattgc-aactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| | |||| |||||||||||||| || ||||| |||||||  ||||||||||| ||||||||||    
T  35595217 aaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcc 35595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 51685763 - 51685866
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | ||||||||||||||||| ||||  ||| |||||| ||||||||||||||||||  |||||||||||||||||    
T  51685763 tgcaaaggggctaaatcttagggggtc-aaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactt 51685861  T
Q  386 tagcc 390  Q
    |||||    
T  51685862 tagcc 51685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 11437132 - 11437300
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||| |||||||||||||||  | || |||||||||||||||||||   |||| || ||    || ||| ||| ||| |||||||||| | |||||||    
T  11437132 taattatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggcc-aaaattg 11437230  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |||  ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11437231 tagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 11437300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 45149968 - 45150068
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||||  |||||||| |||||||| | || |||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  45149968 tgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactt 45150066  T
Q  386 ta 387  Q
    ||    
T  45150067 ta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 12389918 - 12390082
Alignment:
Q  224 ttacacacgtggcatgccaaatcagt-gttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgta 322  Q
    ||||||||||||||||||| | |||  ||||| | ||||||||| | | |||| ||| | ||||||||||||||||| |||   |||||| |||||| ||    
T  12389918 ttacacacgtggcatgccaca-cagacgttgattgggtcaaaatagatcaaaaggactattattgcaaaggggctaaatcta--gggggccaaaattata 12390014  T
Q  323 gtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
     ||||||| |||| ||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  12390015 atttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 35594389 - 35594217
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| ||||||||||||||||||||||||| || ||||||   ||||||||||   |||| |||||    |||||||||||||| | |||||||    |    
T  35594389 aatggttaattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttaggggtc--a 35594292  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||  | | || |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  35594291 aaattgtagttttaatactta-ggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 35594217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 387
Target Start/End: Original strand, 39153050 - 39153214
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  |||||| |||||||||||   |||| |||||    |||||||||| ||| |||||| ||| | |||||||    
T  39153050 taattacacacgtggcatgccacgtaggcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc-aaaattg 39153147  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||| |||| |||| ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  39153148 tagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 33088614 - 33088718
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||| | ||  ||||||||||||||| |||||||| ||||  | ||||||||||||||    
T  33088614 ttgcaaaggggctaaatcttagggaggc-aaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcact 33088712  T
Q  385 ttagcc 390  Q
    ||||||    
T  33088713 ttagcc 33088718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 39699764 - 39699867
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| |||||||||| | ||||||||||||| ||| | || |||||||||||||||| || ||||||||| ||||||||||||||||||    
T  39699764 ttgcaatggggctaaatcttagggggcc-aaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcact 39699861  T
Q  385 ttagcc 390  Q
    ||||||    
T  39699862 ttagcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 52275072 - 52274968
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| | |||||| |||||||||  | ||||||||||||||||| | || |||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  52275072 ttgcaatgaggctaaatcttaggggccc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcact 52274974  T
Q  385 ttagcc 390  Q
    ||||||    
T  52274973 ttagcc 52274968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 45148683 - 45148581
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||| ||| |||||||||||| ||||||||||||||| | | || |||| ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  45148683 tgcaaaggggttaaatcttaggggggc-aaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactt 45148586  T
Q  386 tagcc 390  Q
    |||||    
T  45148585 tagcc 45148581  T

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Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 24426072 - 24426173
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||| | || |||| ||||||||||| |||||||||||||  ||||| ||||||||||    
T  24426072 ttgcaatggggctaaatcttagggga-ctaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcact 24426170  T
Q  385 tta 387  Q
    |||    
T  24426171 tta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 11436210 - 11436042
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||| |||||||||||  |  | |||||||||||||||||||   ||||  ||||    |||||| ||| ||| |||||||||| | |||||||    
T  11436210 taattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggcc-aaaattg 11436112  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| | | ||   || ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  11436111 tagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcc 11436042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 41366068 - 41366231
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||| ||||||||||||| ||||||| |||||||| || | |||| |||||   |||||| |||||||| |||||||||| ||||| |||| ||    
T  41366068 tacacatgtgacatgccaaatcagcgttgactaggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatcttaggggg-ctaaa-ttgtggt 41366165  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||  | | || ||||  |||||||||  ||||||||||||| | |||||||||||||||||||||    
T  41366166 tttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcc 41366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 14999360 - 14999285
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcc 14999285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 43058885 - 43058789
Alignment:
Q  289 aaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| | || |||||||||||||||| ||||| |||||| |||||| ||||||| ||||||    
T  43058885 aaaggggctaaatcttagaggg-ctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtacttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 36613020 - 36612853
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| |||||  | || ||||| |  || |||||||   ||||||||||    ||||||||| |||| ||||||||||  ||||||||    
T  36613020 taattacacacgtggcctgccacgtaagcgttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggt-taaaattg 36612922  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |    ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  36612921 tagtttttgtacttaagatc-caaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 36613901 - 36614005
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||||| |||||| |||||||||| | ||||||||||||||||| | || |||| ||||||| ||| ||||| ||||||| ||| |||||| ||||||    
T  36613901 ttgcaaagaggctaaatcttagggggtc-aaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcact 36613999  T
Q  385 ttagcc 390  Q
    ||||||    
T  36614000 ttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 46524706 - 46524618
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggg 310  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||   |||| || ||| |||||||||||||||| ||||||||||    
T  46524706 taattacacacgtggcatgccaaataagcgttgacttggtcaaaattggccaaaa-gatcacaattgcaaaggggctaaatcttaggggg 46524618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 46525734 - 46525822
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggg 310  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||   |||| || ||| |||||||||||||||| ||||||||||    
T  46525734 taattacacacgtggcatgccaaataagcgttgacttggtcaaaattgaccaaaa-gatcacaattgcaaaggggctaaatcttaggggg 46525822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 45157234 - 45157309
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| |||| |||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||    
T  45157234 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcc 45157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 390
Target Start/End: Complemental strand, 46066605 - 46066525
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||| |||| ||||  ||||| ||||||||||||||||||  || |||||||||||||| ||||    
T  46066605 ggggctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtgcacttaagcc 46066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 39222493 - 39222575
Alignment:
Q  309 gggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtt-aaggggggaaaagtgcactttagcc 390  Q
    ||||||| |||||||||||| | | || |||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  39222493 gggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 39152007 - 39151934
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||||||||||||| |||| |||| ||||||| ||| ||||||||| ||||||||| |||| |||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 390
Target Start/End: Complemental strand, 16290224 - 16290093
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    ||||||||||  |||||||||||    || ||||||| |||||||| ||| || |||||||||||||||| | |||| |||  |||||||||||||||||    
T  16290224 gtcaaaattggaaaaaatgaccaaatatgtaaaggggttaattctt-gggaggttaaaattgtagtttttatacataagggaccaaaattgcaacttttt 16290126  T
Q  359 gaaagtta-aggggggaaaagtgcactttagcc 390  Q
    ||| |||| | |||| |||| ||||||||||||    
T  16290125 gaacgttagatggggaaaaaatgcactttagcc 16290093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 23980464 - 23980567
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| ||||||| |  | |||||| |||||||||| | || || | ||||||||||| ||||| |||||||  |||||||||||||||||    
T  23980464 tgcaaaggggctaaatcttaggagacc-aaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactt 23980562  T
Q  386 tagcc 390  Q
    |||||    
T  23980563 tagcc 23980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 43060031 - 43060107
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||||||||||| ||| |||||||||||||  ||||| ||||| ||||||||||    
T  43060031 aaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcc 43060107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 17505109 - 17505038
Alignment:
Q  241 caaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggc 312  Q
    ||||||||||||||||||||||||||||  |||||  | || ||||||||| |||||||||||| |||||||    
T  17505109 caaatcagtgttgactcggtcaaaattgacaaaaaatatcaatattgcaaatgggctaattcttgggggggc 17505038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 387
Target Start/End: Original strand, 52276099 - 52276261
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    |||||| ||||||||||||    || ||||||| ||||||||||| | |||| || ||   |||||| |||||||| |||||||||  ||||| || |||    
T  52276099 ttacacgcgtggcatgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttagggga-ctaaatttatag 52276197  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||| | || |||| ||||||| ||| |||||||||||||   |||| |||||||||||||    
T  52276198 tttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttta 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 37526876 - 37526975
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||  | |||||||| |||| | |   || || | ||||||||||| |||||||||||||||||||||||||| |||||    
T  37526876 tgcaaaggggctaaatcttagggg--ccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacactt 37526973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 45156126 - 45156052
Alignment:
Q  313 taaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||||||||||| ||||   ||||||||||| || ||||||||| ||||||| ||||||||| ||||||    
T  45156126 taaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 30249515 - 30249588
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||||||||||||| ||||   | |||||||| ||||||||||||||||| || ||||| |||||||||||    
T  30249515 aaaattgtagtttttgtacataaaagatcaaaattacaactttttgaaagttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 50680434 - 50680335
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||| ||| |||||||||  |||||||| |||||||| | | || |||| ||||||||||| |||||| |||||||| |||||||| |||||||    
T  50680434 tgcaaaggggttaaatcttagggga-ctaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaag-ggggaaaaatgcactt 50680337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 11190433 - 11190385
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  11190433 caaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 39698639 - 39698563
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||| ||| | || |||| |||||||| || ||||| |||||||||||||| ||||||||||||||||    
T  39698639 aaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 50681657 - 50681705
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  50681657 caaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 46524897 - 46524850
Alignment:
Q  17 agattgttgttgttgttgaaaagattcatgtaatattttctggatttt 64  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||    
T  46524897 agattgttgttgttgttgaagagattcatgttgtattttctggatttt 46524850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 7983153 - 7983053
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||| ||| |||||||||||| |||||||| |||||  | |||| |||| ||||||||||| || ||||||||| | ||| ||||||||||||    
T  7983153 ttgcaatggggataaatcttaggggggc-aaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcact 7983056  T
Q  385 tta 387  Q
    |||    
T  7983055 tta 7983053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 43378711 - 43378810
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||| ||||| ||||||| || | ||||||||| ||||||| | || ||| ||||||||| || |||||||||||||| | | |||||||||||||    
T  43378711 tgcaaaggtgctaaatcttaggtggtc-aaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcactt 43378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 7674602 - 7674528
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||  ||||||||||| ||||| ||||||| ||||||||||| |||||||||||    
T  7674602 aaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagtta-ggggggaaaagggcactttagcc 7674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 7675457 - 7675559
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | |||||| || ||||| | | || | || ||||||||||| |||||||||||||| || || ||||| |||||    
T  7675457 tgcaaaggggctaaatcttagggggtc-aaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacactt 7675554  T
Q  386 tagcc 390  Q
    |||||    
T  7675555 tagcc 7675559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 14512556 - 14512643
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttagggg 309  Q
    ||||||||||||||||||||||  |  | ||||||| ||||||||||||  |||| |  |||||||||||||||||||| || ||||||    
T  14512556 taattacacacgtggcatgccacttaggcgttgactaggtcaaaattgcctaaaaag-tcactattgcaaaggggctaaatcatagggg 14512643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 390
Target Start/End: Complemental strand, 39221405 - 39221358
Alignment:
Q  344 aaattgcaactttttgaaagtta-aggggggaaaagtgcactttagcc 390  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcc 39221358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 44404525 - 44404442
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||| |||||||||| | || ||||  |||||||| | ||||||||||||| | ||| ||||||||| |||||||    
T  44404525 gggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcc 44404442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 390
Target Start/End: Complemental strand, 4059604 - 4059522
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| ||||||| | ||||| || ||| |||| |||||| ||||| ||||||||  || |||| ||||||||||||||||||    
T  4059604 ggggccaaaattgcaattttttttaatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 4059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 14999983 - 15000056
Alignment:
Q  317 attgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| |||||| | || ||| |||||||||||| ||||| ||||||| || || ||||||| |||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcc 15000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 16281318 - 16281371
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||| ||||||||||||| ||  |||| || |||||||||    
T  16281318 ggggtcaaaattgcaactatttgaaagttaagtggaaaaaaatgtactttagcc 16281371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 29182054 - 29182001
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||| ||||||||||||| |||| ||| ||||||| ||||||||||    
T  29182054 ggggccaaaattacaactttttgaaacttaaagggtgaaaagtacactttagcc 29182001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 46066883 - 46066822
Alignment:
Q  51 attttctggattttggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaag 112  Q
    ||||| ||| |||||||||||||||| |  ||| ||||||||||||||| ||||| ||||||    
T  46066883 attttttgggttttggttgagaagaagacgaagttgttaagaaaatgaatgagaaaatgaag 46066822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 2260629 - 2260677
Alignment:
Q  341 tcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    ||||||| |||||||||| ||| |||||||  |||||||||||||||||    
T  2260629 tcaaaatcgcaactttttaaaacttaagggatgaaaagtgcactttagc 2260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 7060858 - 7060906
Alignment:
Q  318 ttgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    ||||||||||| ||| |||||| |||||||||||||||||  |||||||    
T  7060858 ttgtagttttttttcttatgggatcaaaattgcaacttttaaaaagtta 7060906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 215 - 387
Target Start/End: Complemental strand, 42195306 - 42195137
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||   |||| |||||    |||||||||||||| ||||| |||| | |    
T  42195306 aatggctaattacacacgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta-ggggacca 42195208  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||||| |||||| |||| |||| |||||| |||||||||| |||||||| |||||||||||||||||||    
T  42195207 aaattgtagattttgtacatagggggccaaaatcgcaacttttt-aaagttaa-gggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 28538843 - 28538676
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||||||||| ||     ||||| ||||||||||||  ||||| || ||   ||||||||||||||| |||||||||| |||||||||    
T  28538843 taattacacacgtggcatgccacatagacattgac-cggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttaggggg-ctaaaattg 28538746  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  28538745 tagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcc 28538676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 5778773 - 5778937
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||| | |||| |||||   |||||| |||||||| ||||||||||||| ||||||| ||    
T  5778773 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggct-aaattgtggt 5778871  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || ||||  |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  5778872 tttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 5778937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 25523172 - 25523069
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | ||||||||||||||||| | || ||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  25523172 tgcaaaggggctaaatcttagggggtc-aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactt 25523074  T
Q  386 tagcc 390  Q
    |||||    
T  25523073 tagcc 25523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 42196127 - 42196301
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||   |||| |||||    |||||| ||||||| ||||| |||| |||    
T  42196127 aatggttaattacacatgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatctta-ggggacta 42196225  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| |||||||||||| ||||  ||| |||| |  ||||||||| ||||||| |||||| ||||||||||||||||    
T  42196226 aaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagcc 42196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 16650788 - 16650956
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||||||||| |   | ||||||| | |||||||||   |||| |||||    |||||| |||||||  |||||||| ||||||||||    
T  16650788 taattacacacgtggcatgccacacatgcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggg-gctaaaattg 16650886  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| | | || |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  16650887 tagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 25055580 - 25055412
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||||||||  |||||| | ||||||||| | |||| |||||    |||||| ||||||| ||||| |||||| |||||||    
T  25055580 taattacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatctta-gggggccaaaattg 25055482  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| | |||| ||| ||||||||||||    || |||||||  ||||||||||||||||||||||    
T  25055481 tagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcc 25055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 20216756 - 20216861
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||  ||| || |  |||||||||| ||||||||| |||||||||||||||||    
T  20216756 actattgcaaatgggctaattctt-ggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtg 20216854  T
Q  381 cacttta 387  Q
    |||||||    
T  20216855 cacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 20214363 - 20214196
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| ||||| ||  | ||||||   ||||||||||  | ||| ||| ||||||||||| ||| |||||||| | ||||| |||||||    
T  20214363 taattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattctt-gaggggccaaaattg 20214265  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| ||||  | |  |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  20214264 tagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 24333080 - 24332916
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  |||||| |||||||||||   |||| |||||    |||||||||| ||| |||||| ||| | |||||||    
T  24333080 taattacacacgtggcatgccacgtaggcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc-aaaattg 24332983  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||| |||| |||| ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  24332982 tagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 36486422 - 36486589
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  ||||| ||||||||||||  ||||| || ||   |||||||||| |||| |||||||||  | |||||||    
T  36486422 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggacc-aaaattg 36486519  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| | || |||||||||||||||| ||||| ||||||| ||||| |||||||||||| ||||    
T  36486520 tagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 36486589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 18486900 - 18487003
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | |||||||| |||| | | | || |||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  18486900 tgcaaaggggctaaatcttagggggcc-aaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactt 18486998  T
Q  386 tagcc 390  Q
    |||||    
T  18486999 tagcc 18487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 19753014 - 19752912
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    ||||| |||||||| || ||||||| | ||||||||||||||||| | || |||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  19753014 tgcaatggggctaaatcatagggggcc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactt 19752917  T
Q  386 tagcc 390  Q
    |||||    
T  19752916 tagcc 19752912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 22940647 - 22940723
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||| ||||||| | || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22940647 aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 5778003 - 5777901
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| |||||||||||||||| |||| ||||| || | || |||||||||||||||| |||||||||||||  ||||| ||||||||||    
T  5778003 ttgcaatggggctaaatcttaggggggctaaa-ttgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcact 5777907  T
Q  385 ttagcc 390  Q
    ||||||    
T  5777906 ttagcc 5777901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 25056307 - 25056482
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaagg-ggctaattcttaggggggct 313  Q
    ||||| ||||||||||||||||||||||||| || ||||||   ||||||||||   ||||  ||||    || ||| | |||||| |||||||||| |     
T  25056307 aatggttaattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaacaaccaaagatgtaaatgaggctaaatcttagggggtc- 25056405  T
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||  | | || |||||||||||||||| ||||||||||||| | | |||||||||||||||||||    
T  25056406 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 387
Target Start/End: Original strand, 28539754 - 28539917
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  ||||| ||||||||||||  ||||| || ||   |||||||||| |||| |||||||||  | |||||||    
T  28539754 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggacc-aaaattg 28539851  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||| | ||  ||||||||||||||| ||||| |||||| ||||||||||| |||||||||    
T  28539852 tagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 40255668 - 40255773
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||| |||| ||| |||||||||| | ||||||||||||| |||   || |||||||||||||||| ||||| ||| ||||| ||||||||||||||    
T  40255668 attgcaatggggttaaatcttagggggcc-aaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcac 40255766  T
Q  384 tttagcc 390  Q
    |||||||    
T  40255767 tttagcc 40255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 21835144 - 21835041
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||||||| ||| |||||||||| | ||||||||||||||||| |||| |||||||||||  ||||||||| ||| || || |||| ||||||||||    
T  21835144 ttgcaaaggggttaaatcttagggggtc-aaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaactt-agagggggaaagtgcact 21835047  T
Q  385 ttagcc 390  Q
    ||||||    
T  21835046 ttagcc 21835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 1015587 - 1015492
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    ||||||||| |||||||||||||||  ||||||||||| |||||| || | |||| |||||||| |||||||| ||||||| ||| |||||||||||    
T  1015587 tgcaaagggactaattcttagggggt-taaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 38834192 - 38834090
Alignment:
Q  283 tattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    |||||||||||  |||| |||||||| | ||||||||||||||||||| |||| ||| ||||||| |||||||||| ||||||||||||  |||| ||||    
T  38834192 tattgcaaaggaactaaatcttagggag-ctaaaattgtagtttttgtacataaggg-tcaaaatcgcaactttttaaaagttaaggggaaaaaaatgca 38834095  T
Q  383 cttta 387  Q
    |||||    
T  38834094 cttta 38834090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 388
Target Start/End: Complemental strand, 36485432 - 36485302
Alignment:
Q  257 cggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttt 356  Q
    ||||||||||||  |||||||| ||   ||||||||||| ||| |||||||||| | |||||| |||||||||| | || | ||||||||||| || |||    
T  36485432 cggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggcc-aaaattatagtttttgtacttaagaggtcaaaattgtaagttt 36485334  T
Q  357 ttgaaagttaaggggggaaaagtgcactttag 388  Q
    || ||||||| ||| |||||| ||||||||||    
T  36485333 tttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 1796162 - 1796054
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    ||||||||||| ||| |||||||| ||||  | ||||||||||||||||| | || | || |||| |||||| ||||||||||||| ||| |||||| ||    
T  1796162 actattgcaaatgggttaattcttgggggatc-aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatg 1796064  T
Q  381 cactttagcc 390  Q
    ||||||||||    
T  1796063 cactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 33160291 - 33160387
Alignment:
Q  293 gggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| ||||| |||| | ||||||||||||| | | | || ||||  |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  33160291 gggctaaatcttaaggggtc-aaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 18154569 - 18154494
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || ||||||||||||| || ||||||||||||||||||  |||||| ||||||||||    
T  18154569 aaaattgtagtttttgtactta-ggggtcaaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagcc 18154494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 33158174 - 33158098
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || || ||||||||||||| ||||||||||||| ||||  |||| ||||||||||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcc 33158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 21834941 - 21835019
Alignment:
Q  311 gctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||||||||||   ||||||| |||||||||||| ||| || |  |||||||||||||||||||||    
T  21834941 gctaaaattgtagtttttgttcatagaaggtcaaatttgcaactttttcaaactt-ataggggaaaagtgcactttagcc 21835019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 38476715 - 38476781
Alignment:
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||||| |||||||||||  ||||||||| ||| |||||||| ||||||||||||||||||    
T  38476715 ttttttttcatagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 38476781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 5730490 - 5730441
Alignment:
Q  342 caaaattgcaactttttgaaagttaagg-ggggaaaagtgcactttagcc 390  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  5730490 caaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcc 5730441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 5730806 - 5730934
Alignment:
Q  232 gtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgtt 331  Q
    ||||||||||||||||| ||||||| ||||||||||| | ||||  ||||   |||||| |||| ||| |||||||||| || ||||||| ||||| ||     
T  5730806 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggact-aaattgtggttttggta 5730904  T
Q  332 catatggggtcaaaattgcaactttttgaa 361  Q
    | || |||| |||||||| || ||||||||    
T  5730905 cttagggggccaaaattggaagtttttgaa 5730934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 19754128 - 19754232
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggg-gaaaagtgcact 384  Q
    ||||| |||||||| || ||||||| | |||||||||||||||||   || |||| ||||||||||| ||||||||||||| |||||  |||| ||||||    
T  19754128 tgcaatggggctaaatcatagggggcc-aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcact 19754226  T
Q  385 ttagcc 390  Q
    ||||||    
T  19754227 ttagcc 19754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 2373212 - 2373149
Alignment:
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    |||| |||||||||||  ||||| |||||||||| ||| |||||||| ||||||||||||||||    
T  2373212 tttttttcatatggggctaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttag 2373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 20653886 - 20653820
Alignment:
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||||| ||||||||||| |||||||||| ||| ||||| |  ||||||||||||||||||    
T  20653886 ttttttttcataaggggtcaaaatcgcaactttttaaaacttaagagatgaaaagtgcactttagcc 20653820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 25524152 - 25524229
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta-aggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || |||| ||||||| ||| ||||| ||| |||  |||||||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcc 25524229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 31576610 - 31576663
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| |||||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  31576610 ggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagcc 31576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 2686141 - 2686197
Alignment:
Q  56 ctggattttggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaag 112  Q
    |||| |||||||||||||||| || ||| |||| |||||||||| ||||||||||||    
T  2686141 ctgggttttggttgagaagaagatgaagttgttgagaaaatgaatgagaagatgaag 2686197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 7311685 - 7311590
Alignment:
Q  294 ggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||||| ||||||||||||||||||| | |  | || ||| ||||||| ||||||||||||| ||||||    |||||||||||||    
T  7311685 ggctaaatcttaggggg-ctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggggtgcactttagcc 7311590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 15885180 - 15885132
Alignment:
Q  340 gtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    |||||||| |||||||||||||| |||||||| |||||||||| |||||    
T  15885180 gtcaaaatcgcaactttttgaaacttaaggggtgaaaagtgcaatttag 15885132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 42195953 - 42196011
Alignment:
Q  53 tttctggattttggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaag 112  Q
    ||||||| |||||||||||||||| || ||| ||||||||||||| | ||||||||||||    
T  42195953 tttctgggttttggttgagaagaagatgaagttgttaagaaaatg-atgagaagatgaag 42196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 1797294 - 1797375
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaa 367  Q
    ||||||||||||||| ||||| |||  | |||||||||||||||||| ||| || | ||||||||||| ||||| ||| ||||    
T  1797294 ttgcaaaggggctaaatcttaagggacc-aaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaa 1797375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 2186847 - 2186774
Alignment:
Q  313 taaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||||||||||| ||||   |  ||||||||||||||||||||| || |||||| |||| |||||||||    
T  2186847 taaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  316 aattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    ||||||||||||||| |||| || | ||||||||||| |||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 2188962 - 2189030
Alignment:
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| |||| ||| | ||||| |||||||||||||| ||||| | |||||||||| ||||||||    
T  2188962 tagtttttgtacataggggct-aaaatcgcaactttttgaaacttaagagaggaaaagtgcgctttagcc 2189030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 18485191 - 18485138
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||||||| ||||| |||||||  |||| |||||||||||||||||    
T  18485191 ggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcc 18485138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 23040287 - 23040340
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| |||||||||| ||| |||||||  |||||||| |||||||||    
T  23040287 ggggtcaaaatcgcaactttttaaaacttaagggatgaaaagtgtactttagcc 23040340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 3598813 - 3598900
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttagggg 309  Q
    ||||||||||||||||||||||  | || ||||||| |||||||||||   ||||||  |||||||||| || |||||| || ||||||    
T  3598813 taattacacacgtggcatgccacttaagcgttgactaggtcaaaattggctaaaatg-tcactattgcagagaggctaaatcatagggg 3598900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 41663754 - 41663826
Alignment:
Q  318 ttgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| ||||| ||| || |||| |||||| |||||||||| ||| |||| ||| ||||| ||||||||||||    
T  41663754 ttgtaattttttttcttagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagcc 41663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 400 - 233
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||||||||| ||  | |||||| ||||||||||||  ||||| || ||    ||||||||||||||||||||||||  | ||||||     
T  400 taattacacacgtggcatgccacataggcgttgac-cggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggacc-aaaatta 303  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| |||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  302 tagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 912 - 1058
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  | || |||||| ||||||||||||  ||||| |||||    ||||||||||||||||||| ||||||| ||||||     
T  912 taattacacacgtggcatgccacgtaagcgttgac-cggtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattctt-ggggggccaaaatta 1009  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaagg 369  Q
    |||||||||| |||| |||  ||||||||||||||||| ||||||||||    
T  1010 tagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 8e-34; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 22220556 - 22220388
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||||||||  |||||| | ||||||||| | |||| |||||    |||||| ||||||| |||||||||| | |||||||    
T  22220556 taattacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggcc-aaaattg 22220458  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| | |||| |||||||||||||||| | ||| |||||||  ||||||||||||||||||||||    
T  22220457 tagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 387
Target Start/End: Original strand, 8389642 - 8389787
Alignment:
Q  241 caaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatgggg 340  Q
    ||||||||  |||||| ||||||||||| | |||| |||||  | || ||||||| ||| |||||||||  ||||||||||||||||||| |||| |||     
T  8389642 caaatcagctttgacttggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttagggga-ctaaaattgtagtttttgtacataaggga 8389740  T
Q  341 tcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
     ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8389741 ccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 22221291 - 22221465
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||||| |||||| || ||||||   ||||||||||   |||| || ||    || ||||||||||| |||||||||| | |    
T  22221291 aatggttaattacacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtc-a 22221389  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||  | | || |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  22221390 aaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 22227633 - 22227807
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||||| |||||| || ||||||   ||||||||||   |||| || ||    || ||||||||||| |||||||||| | |    
T  22227633 aatggttaattacacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtc-a 22227731  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||  | | || |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  22227732 aaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22227807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 241 - 387
Target Start/End: Complemental strand, 11282156 - 11282011
Alignment:
Q  241 caaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatgggg 340  Q
    |||||||| |||||||  |||||||||| | |||| || ||  |||||||||||| ||| |||||||||| | ||||||||  |||||||  ||| ||||    
T  11282156 caaatcagcgttgactttgtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtc-aaaattgtcatttttgtatataggggg 11282058  T
Q  341 tcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
     ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  11282057 ccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 12352026 - 12351921
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||| | |||||| |||||||||| | ||||||||||||||||| | || |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  12352026 attgcaatgaggctaaatcttagggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcac 12351928  T
Q  384 tttagcc 390  Q
    |||||||    
T  12351927 tttagcc 12351921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 11287943 - 11287779
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||| ||||||||||  ||  | |||||| |||||||||||| ||||||||| ||  |||||||||| | |||||||||||||| | |||||||    
T  11287943 taattacacatgtggcatgccgcataggcgttgac-cggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggcc-aaaattg 11287846  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||| ||| | ||  ||| ||||||||||| ||||| ||||||| ||| | ||||||||||||||    
T  11287845 tagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 5514084 - 5513982
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| | |||||||||| ||||||||||||||||| | || |||| |||||||| || |||||||||||| |||||| ||||||||||||    
T  5514084 tgcaaaggggctaaattttaggggggc-aaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcactt 5513987  T
Q  386 tagcc 390  Q
    |||||    
T  5513986 tagcc 5513982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 10007761 - 10007864
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||  | |||||||| |||| | | | || |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  10007761 tgcaaaggggctaaatcttaggggacc-aaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactt 10007859  T
Q  386 tagcc 390  Q
    |||||    
T  10007860 tagcc 10007864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 43661759 - 43661924
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    ||||||| ||||||||||| |   | ||||||| ||||||||||| | |||| |||||    |||||  |||| || |||||||||| | |||||| |||    
T  43661759 ttacacatgtggcatgccacacatgcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggcc-aaaattttag 43661857  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| ||||  || | |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  43661858 tttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcc 43661924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 8388564 - 8388464
Alignment:
Q  287 gcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttt 386  Q
    ||||||||||||| |||||||||| | |||||| |||||||||| |||| ||||  |||||||||||||||| |||||||  ||||| ||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggcc-aaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcacttt 8388468  T
Q  387 agcc 390  Q
    ||||    
T  8388467 agcc 8388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 10006447 - 10006344
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | |||||||| |||||  | | || |||| ||||||||||| |||||||||||||  |||||||||||||||||    
T  10006447 tgcaaaggggctaaatcttagggggcc-aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactt 10006349  T
Q  386 tagcc 390  Q
    |||||    
T  10006348 tagcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 29043499 - 29043400
Alignment:
Q  288 caaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||||| |||||| |||   ||||||||||||||||| |||| ||||||||||| || |||||||||| |||||||| ||||||||| ||||||    
T  29043499 caaaggggctaaatcttagagggaa-aaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaacttta 29043401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 12353357 - 12353460
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||| |||||||| |||||||||| | |||||| ||||||| || | || |||| ||||||||||| |||||||||||||| |||||||||||||||    
T  12353357 attgcaatggggctaaatcttagggggcc-aaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcac 12353453  T
Q  384 tttagcc 390  Q
    |||||||    
T  12353454 tttagcc 12353460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 30335804 - 30335639
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    ||||||| ||||||||||| |   | ||||||| |||||||||||   |||| |||||    |||||||||||||| ||||||||||  ||||||||||     
T  30335804 ttacacatgtggcatgccacacatgcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggt-taaaattgtaa 30335706  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||| | ||  | | ||||||||||| ||||| ||||||||||| |||||| ||||||||||||    
T  30335705 tttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 36249618 - 36249552
Alignment:
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36249618 tttttattcataggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 388
Target Start/End: Complemental strand, 43661368 - 43661267
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||| | |||||| |||||||||| |||| |||  |||||||| |||||||| ||| |||||||  |||||||||||||    
T  43661368 tgcaaaggggctaaatcttagggggcc-aaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactt 43661270  T
Q  386 tag 388  Q
    |||    
T  43661269 tag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 1823655 - 1823552
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| ||||||| |||||||||  | ||| ||||||||||||| | ||  ||||||||||||||| ||||| ||||||||||||| |||||| |||||    
T  1823655 tgcaaatgggctaaatcttaggggaccgaaa-ttgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactt 1823557  T
Q  386 tagcc 390  Q
    |||||    
T  1823556 tagcc 1823552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 1858100 - 1857997
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| ||||||| |||||||||  | ||| ||||||||||||| | ||  ||||||||||||||| ||||| ||||||||||||| |||||| |||||    
T  1858100 tgcaaatgggctaaatcttaggggaccgaaa-ttgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactt 1858002  T
Q  386 tagcc 390  Q
    |||||    
T  1858001 tagcc 1857997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 390
Target Start/End: Original strand, 11283171 - 11283310
Alignment:
Q  250 gttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattg 349  Q
    |||||||  ||||||||||   ||||||| ||  |||||||||||||||| | |||||||  | ||||||||  ||||| | |||| ||||  ||||||     
T  11283171 gttgactttgtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggacc-aaaattgtcatttttatacatagggggctaaaatta 11283269  T
Q  350 caactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  11283270 caactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 24122985 - 24122883
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||  ||||| |||||||||  |||||||| |||||||||| | || |||||||||||||||| ||||| |||||| ||||||||||| |||||||    
T  24122985 tgcaaagaagctaaatcttagggga-ctaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactt 24122888  T
Q  386 tagcc 390  Q
    |||||    
T  24122887 tagcc 24122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 390
Target Start/End: Original strand, 42982640 - 42982758
Alignment:
Q  271 aaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggg 370  Q
    |||||||| ||  |||| ||| ||||||||||||  |||| | |||||||||||||||||| | | |||| ||||||| ||||||||| ||| |||| ||    
T  42982640 aaaaatgatcaaaattgtaaatgggctaattcttgaggggtc-aaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaagg 42982738  T
Q  371 gggaaaagtgcactttagcc 390  Q
     |||||||||||||||||||    
T  42982739 tggaaaagtgcactttagcc 42982758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 29968334 - 29968434
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| |||||||| |||||||||  | | ||||||||||||||| | || |||| ||||||||||| ||||| |||||||| ||||||||||||||||    
T  29968334 ttgcaatggggctaaatcttaggggacc-agaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcact 29968431  T
Q  385 tta 387  Q
    |||    
T  29968432 tta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 389
Target Start/End: Original strand, 18979139 - 18979220
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    ||||| ||||||||||||||| |   || |||| ||||||||||| || |||||||||| ||||||||||||||||||||||    
T  18979139 ggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 381
Target Start/End: Complemental strand, 18978123 - 18978029
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgc 381  Q
    ||||||||||||||| ||||| |||| | ||||||||||||||||| | || |||| |||||||| ||  ||||||||||| |||||||||||||||    
T  18978123 ttgcaaaggggctaaatcttaaggggcc-aaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 1824084 - 1824174
Alignment:
Q  294 ggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| |||||||||| | ||||||||||||||||| | || |||  ||||||||||| |||||||||||||  ||||||||| |||||||    
T  1824084 ggctaaatcttagggggcc-aaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 1858529 - 1858619
Alignment:
Q  294 ggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| |||||||||| | ||||||||||||||||| | || |||  ||||||||||| |||||||||||||  ||||||||| |||||||    
T  1858529 ggctaaatcttagggggcc-aaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 38974878 - 38974795
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  38974878 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38974795  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 38980062 - 38980145
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  38980062 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38980145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 39005976 - 39005893
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  39005976 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39005893  T

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Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 39011159 - 39011242
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  39011159 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39011242  T

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Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 24360938 - 24361030
Alignment:
Q  23 ttgttgttgttgaaaagattcatgtaat-attttctggattttggttgagaagaaaataaagctgttaagaaaatgaaggagaagatgaaggaga 116  Q
    ||||||||||||||||||||| |||  | ||||||||| | |||||||||||||| || ||| |||||||||||||| |||||| ||||||||||    
T  24360938 ttgttgttgttgaaaagattcgtgttgttattttctgg-tgttggttgagaagaagatgaagttgttaagaaaatgacggagaa-atgaaggaga 24361030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 32207350 - 32207424
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| | || || ||||||||||||| |||||||| ||||  ||||| ||||||||||||||||    
T  32207350 aaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagcc 32207424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 32968509 - 32968456
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  32968509 ggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 32968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 381
Target Start/End: Complemental strand, 18971042 - 18970920
Alignment:
Q  257 cggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttt 356  Q
    ||||||||||||  ||||| |||||   ||||||||||| ||| ||||  |||| | ||||||||||||||||| | || |||| |||||||| ||  ||    
T  18971042 cggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtc-aaaattgtagtttttgtacttagggggccaaaattgaaagatt 18970944  T
Q  357 ttgaaagttaaggggggaaaagtgc 381  Q
    ||||||||| |||||||||||||||    
T  18970943 ttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 30568989 - 30568887
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||||  | |||||| |||||||||| | || | | ||||||||| |||||||||||| || || |||| |||||||||||    
T  30568989 tgcaaaggggctaaatcttaggggatc-aaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaactt-agagggggaaagtgcactt 30568892  T
Q  386 tagcc 390  Q
    |||||    
T  30568891 tagcc 30568887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 387
Target Start/End: Original strand, 40471110 - 40471244
Alignment:
Q  251 ttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgc 350  Q
    ||||||||||||||||||   ||||||||||    | ||||| || ||| ||||| |||| |||||||||||||||||||   |||||   ||||||||     
T  40471110 ttgactcggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaagggg-ctaaaattgtagtttttgtatttatggac-caaaattgt 40471207  T
Q  351 aactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    || ||||| |||||||| |||||||||||||||||||    
T  40471208 aagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 11456697 - 11456638
Alignment:
Q  331 tcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  11456697 tcatagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 24123896 - 24123981
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggg 372  Q
    |||||||||||||| ||||||| || ||||||||||| |||| || | || | || ||||||||||| ||||||||||||| |||||    
T  24123896 tgcaaaggggctaaatcttaggagg-ctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg 24123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 24483196 - 24483143
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||    
T  24483196 ggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 32973984 - 32974037
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| |||||| ||||| |||||||||||| ||||| |||||||||||||||||    
T  32973984 ggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagcc 32974037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 36337621 - 36337666
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgca 382  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||    
T  36337621 ggggtcaaaattgcaactttttgaaacttaaagagggaaaagtgca 36337666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 45114569 - 45114617
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| ||||    
T  45114569 caaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcc 45114617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 2379416 - 2379321
Alignment:
Q  17 agattgttgttgttgttgaaaagattcatgtaatattttctggatttt--------ggttgagaagaaaataaagctgttaagaaaatgaaggagaa 105  Q
    |||||||||||||||||||||||||| ||||  ||||||| | |||||        |||||||||||| || ||| |||||||||||||||||||||    
T  2379416 agattgttgttgttgttgaaaagatt-atgttttattttcagaattttttagtgttggttgagaagaagatgaagttgttaagaaaatgaaggagaa 2379321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 11288914 - 11288961
Alignment:
Q  343 aaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||| ||||||||||||| ||| | |||||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagcc 11288961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 34625218 - 34625303
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatat--ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||||||||||  | |   |||||||||||||||| ||| |||  |||  |||||||||| ||||||    
T  34625218 gggggctaaaattgtagtttttgttcatataagagactaaaattgcaactttttcaaacttagagggataaaagtgcaccttagcc 34625303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 45112999 - 45112949
Alignment:
Q  259 gtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttagggg 309  Q
    |||||||||| |||||| || ||  ||||||||||||||||||||||||||    
T  45112999 gtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttagggg 45112949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 3819541 - 3819489
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| |||||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaa-gggggaaaaatgcactttagcc 3819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 30336525 - 30336602
Alignment:
Q  313 taaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||| | || | ||  ||||||  || ||||||||||||| ||||| | |||||||||||||||    
T  30336525 taaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 30570254 - 30570353
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| ||||||| |||||||||| | |||||| || ||||||| |||| ||  |||||||||||||||||| ||| |||  |||| ||| ||||||||    
T  30570254 tgcaaaagggctaaatcttagggggcc-aaaattctaatttttgtacataagga-tcaaaattgcaactttttaaaacttagaggggaaaaggtgcactt 30570351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 36449910 - 36449778
Alignment:
Q  257 cggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttt 356  Q
    |||||||||||| | |||| || ||  ||||||||||| ||||||||| ||||||| ||||||||||||||||| | || |||| ||||||||||| |||    
T  36449910 cggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagttt 36449812  T
Q  357 ttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||||||||||||||    
T  36449811 ttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 38840489 - 38840594
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||| | || ||||  |||||||||| ||||||||||||||||||||||||||||||    
T  38840489 attgcaatggggctaaatcttagggg-gctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcac 38840587  T
Q  384 tttagcc 390  Q
    |||||||    
T  38840588 tttagcc 38840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 1034407 - 1034570
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagt 324  Q
    |||||| ||||||||||||||||| ||||||| |||||||| || | |||| |||||   |||| ||  |||||| ||||||||||||| ||||||| ||    
T  1034407 tacacatgtggcatgccaaatcagagttgactaggtcaaaagtggtcaaaaggaccaaagttgc-aattggctaaatcttaggggggct-aaattgtggt 1034504  T
Q  325 ttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||| || | || |||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  1034505 tttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 18797421 - 18797246
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| ||||||||||||||||||||||||| || ||||||   ||||||||||   |||| |||||    |||||||||||||| | |||||||| | |    
T  18797421 aatggttaattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtc-a 18797323  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaagggg-ggaaaagtgcactttagcc 390  Q
    |||||||||||||  | | || |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  18797322 aaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcc 18797246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 7899886 - 7899983
Alignment:
Q  292 ggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| ||||||||| |||||||||||||||| ||| | || |||  ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7899886 ggggctaaatcttagggg-gctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 18904467 - 18904367
Alignment:
Q  289 aaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    ||||||||||||||||||||   | ||||||||||||||||| | || |||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  18904467 aaaggggctaattcttagggaacc-aaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttag 18904369  T
Q  389 cc 390  Q
    ||    
T  18904368 cc 18904367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 22587952 - 22588054
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| ||||| |||| | ||||||||||||||||| |||| |||| ||||||||||| ||||||||||||| | |||||||| |||||||    
T  22587952 tgcaaaggggctaaatcttaaggggcc-aaaattgtagtttttgtacata-ggggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactt 22588049  T
Q  386 tagcc 390  Q
    |||||    
T  22588050 tagcc 22588054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 23869533 - 23869635
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||||||| |||||||| | |||||||||||||||||||   || |||| ||||||||||| ||||| ||||||||||| ||||||||||||||    
T  23869533 tgcaaaggggctaaatcttagggag-ctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcactt 23869630  T
Q  386 tagcc 390  Q
    |||||    
T  23869631 tagcc 23869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 390
Target Start/End: Original strand, 11938725 - 11938889
Alignment:
Q  223 attacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgta 322  Q
    ||||||| ||| ||||||||  ||||| ||||||  ||||||||||  |||||||| ||  |||||||| | |||||||||||||||||| |||||| ||    
T  11938725 attacacgcgtcgcatgccac-tcagtattgactgagtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggc-aaaattata 11938822  T
Q  323 gtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
     ||||||| | || | |  ||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  11938823 -tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 11938889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 358
Target Start/End: Complemental strand, 11996881 - 11996739
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||||||||| ||||||||||| ||||||| |||||||||||   |||| |||||    || ||||||| ||| ||||| | |  |||    
T  11996881 aatggttaattacacacgtggcttgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatctta-gagaacta 11996783  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaacttttt 358  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||    
T  11996782 aaattgtagtttttgtacatagggggtcaaaatcgcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 7898858 - 7898694
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  | ||  |||||| ||||||||||| | |||| ||  |  ||||||| |||||||| |||||||||| | |||||||    
T  7898858 taattacacacgtggcatgccacgtaagcattgact-ggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggcc-aaaattg 7898761  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||| | | | || | ||  |||||||||| |||||||||||||||||| |||||||||||||||    
T  7898760 tagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 1093080 - 1093246
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||  ||| ||||||||| ||  | |||||||| ||||||||||| ||||  || |||||||||||||||||||| |||||| |||  ||||||||    
T  1093080 taattacctacgcggcatgccacataggggttgactcagtcaaaattgccaaaag-gatcactattgcaaaggggctaaatcttagcgggt-taaaattg 1093177  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    || |||||||  ||| ||  ||| ||||||||| |||| |||||||||||||||||| | ||||||||||    
T  1093178 taatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa-tacactttagcc 1093246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 22848359 - 22848191
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||||||||| |||||  |  | ||||| |  |||||||||| | |||| |||||    |||||||||||||| |||||||| | | |||||||    
T  22848359 taattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagcc-aaaattg 22848261  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||   || |||  ||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  22848260 tagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 22848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 389
Target Start/End: Original strand, 26545457 - 26545621
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    ||||||||||||||||||| ||  | ||||| | ||||||||||| | ||||||||||    |||||||||||||| |||||| ||| | |||||| ||     
T  26545457 ttacacacgtggcatgccacatatgcgttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtc-aaaattataa 26545555  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||||||   || |||||||||||||||| ||||||||||| | |  || ||||||||||||||||    
T  26545556 tttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcactttagc 26545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 5819741 - 5819800
Alignment:
Q  317 attgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaa 376  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  5819741 attgtagtttttgttcatatggggccaaaatcgcaactttttgaaacttaaggggggaaa 5819800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 36450917 - 36451018
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    |||||||||| |||||||||| |||||||  |||||||||||| ||| | || |||  ||||||||||| |||||||||||||| |||||||||||||||    
T  36450917 attgcaaaggagctaattctt-ggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcac 36451014  T
Q  384 ttta 387  Q
    ||||    
T  36451015 ttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 18906006 - 18906088
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||| | || ||||  |||||||||| |||||||||||||   |||||||||||||||||||||    
T  18906006 ggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcc 18906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 38839347 - 38839242
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcac 383  Q
    ||||||| |||||||| |||||||||| | |||||||||||||||||   || ||||  |||||||||| ||||||||| ||||||||| |||| |||||    
T  38839347 attgcaatggggctaaatcttagggggcc-aaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcac 38839249  T
Q  384 tttagcc 390  Q
    |||||||    
T  38839248 tttagcc 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 11258809 - 11258912
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta-aggggggaaaagtgcact 384  Q
    ||||| |||||||| |||||||||  ||||||||||||||||||| | || |||| ||||||||||| ||||||||||||| || |||||||| ||||||    
T  11258809 tgcaatggggctaaatcttagggga-ctaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcact 11258906  T
Q  385 ttagcc 390  Q
    ||||||    
T  11258907 ttagcc 11258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 390
Target Start/End: Original strand, 41879146 - 41879313
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||| ||||  |  |  |||||| ||||||||||| | |||||||  |  ||||||| || ||||| | ||||||||  ||||||||    
T  41879146 taattacacacgtggcacgccacgtaggcattgact-ggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggt-taaaattg 41879243  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| ||| | || |||| ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  41879244 tagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcc 41879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 16446262 - 16446154
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    ||||||||||| ||| |||||||| |||   | |||||||||||||||||   |||| ||| |||||||||| |||||||||||||||||  ||||| ||    
T  16446262 actattgcaaatgggttaattcttggggtatc-aaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatg 16446164  T
Q  381 cactttagcc 390  Q
    ||||||||||    
T  16446163 cactttagcc 16446154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 802616 - 802691
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||| || | |||| ||||||||||| ||||||||| || ||||||||||||| ||||||||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcc 802691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 18299476 - 18299373
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| ||||||| || ||||||| | ||||||||||||||| | | || | || |||||||| || ||||||||||||| ||| ||||||||||||||    
T  18299476 tgcaaaagggctaaatcatagggggcc-aaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactt 18299378  T
Q  386 tagcc 390  Q
    |||||    
T  18299377 tagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 18300749 - 18300822
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    ||||||||||||||||| | || |||||||||||||||| ||| |||||||||  |||||||||||||| ||||||    
T  18300749 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 387
Target Start/End: Complemental strand, 13568137 - 13567975
Alignment:
Q  222 aattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgt 321  Q
    ||||||||||||||| ||||| ||  | ||||||   ||||||||||    ||||||| ||||||||||||||||||||| ||   |||   ||||||||    
T  13568137 aattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacctaaatgactactattgcaaaggggctaattttt---gggatcaaaattgt 13568041  T
Q  322 agtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||||||   || |||| ||||||||||| ||||||||| |||   |||||||||| |||||||    
T  13568040 agtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 366
Target Start/End: Complemental strand, 32739706 - 32739647
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    |||||| ||||||||||||||||| |||| |||| ||||||||||| |||||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 41878199 - 41878092
Alignment:
Q  284 attgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaact---ttttgaaagttaaggggggaaaagtg 380  Q
    ||||||| |||||||| ||||| |||| | ||||||||||||| ||| | || |||| ||||||||||| |   ||||||||||||||||||| ||||||    
T  41878199 attgcaatggggctaaatcttaaggggcc-aaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaagggggg-aaagtg 41878102  T
Q  381 cactttagcc 390  Q
    ||||||||||    
T  41878101 cactttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 389
Target Start/End: Complemental strand, 13030392 - 13030293
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||| | ||||| |||||||||| | ||||||||| ||||||| | || |||| ||||||| ||| |||||||||||||  |||||||||||||||||    
T  13030392 tgcaaaagagctaaatcttaggggg-caaaaattgtaatttttgtactta-ggggccaaaattacaagtttttgaaagtta--gggggaaaagtgcactt 13030297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 18869000 - 18868924
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||||||   || | || ||||||||||| ||||||||||||| ||| |||||||| ||||||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 18868924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 8535649 - 8535752
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| | | | ||  || |||||||| ||| ||||| |||||||  || |||||||||    
T  8535649 actattgcaaaggggctaattcttagggggtc-aaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtg 8535745  T
Q  381 cacttta 387  Q
     ||||||    
T  8535746 tacttta 8535752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 13830332 - 13830270
Alignment:
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||| |||||| ||||||||||| |||||||||| ||| || |||||||||||||||||||||    
T  13830332 tttttcttcatagggggtcaaaatcgcaactttttcaaactt-aggggggaaaagtgcacttta 13830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 11257786 - 11257622
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    |||||||||||||||||||     | |||||||  |||||||||| | |||| || ||   |||||| |||||||| ||||||| || | ||||||||||    
T  11257786 ttacacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggcc-aaaattgtag 11257688  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| | | || ||| | |||||||||| |||||||||||||  || | |||||||||||||||||    
T  11257687 tttttatactta-gggtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcc 11257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 28365577 - 28365512
Alignment:
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||||| ||||||||||| |||||||||| ||| |||||||| |||||||||| |||||||    
T  28365577 ttttttttcata-ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcattttagcc 28365512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 13570558 - 13570658
Alignment:
Q  289 aaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttag 388  Q
    |||||| ||||||||| ||||| | |||||| |||||||||| | || |||   |||||||||| ||||||||||||| |||  ||||| ||||||||||    
T  13570558 aaagggactaattctt-gggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttag 13570656  T
Q  389 cc 390  Q
    ||    
T  13570657 cc 13570658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 366
Target Start/End: Complemental strand, 22587667 - 22587525
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||||||||||||||||  |  |  |||||| |||||||||||   |||| |||||    ||||||| |||||| |||||||||| | |||||||    
T  22587667 taattacacacgtggcatgccatgtaggcattgact-ggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggcc-aaaattg 22587570  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    ||||||||||  ||| |||  |||||||| ||||||||||||||||    
T  22587569 tagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 5362247 - 5362188
Alignment:
Q  318 ttgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaa 377  Q
    ||||||||||| ||| ||||||| |||||| |||||||| ||||||||| |||| |||||    
T  5362247 ttgtagttttttttcttatggggccaaaatcgcaactttgtgaaagttagggggcgaaaa 5362188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 8534689 - 8534586
Alignment:
Q  281 actattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtg 380  Q
    |||||||||||| |||||||||||  |||| | ||||||||||||| | | | ||  || ||||||||| || ||||||||| |||| |||||||||| |    
T  8534689 actattgcaaagaggctaattctt--ggggaccaaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaa-gggggaaaagag 8534593  T
Q  381 cacttta 387  Q
    |||||||    
T  8534592 cacttta 8534586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 387
Target Start/End: Complemental strand, 26544313 - 26544152
Alignment:
Q  224 ttacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtag 323  Q
    ||||||||| ||||||||| ||  | ||||||| ||||||||||| | |||| |||||    |||||||| ||||| ||||| || |||||||| |||||    
T  26544313 ttacacacgcggcatgccacatatgcgttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatctta-ggaggctaaaactgtag 26544215  T
Q  324 tttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    ||||||| | || ||   |||||||| || ||||| ||| ||| |||  |||||||||||||||    
T  26544214 tttttgtactta-ggaaccaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 328
Target Start/End: Complemental strand, 1091834 - 1091757
Alignment:
Q  250 gttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagttttt 328  Q
    ||||||||  |||||||||  |||||||||||||||||||||  |||||| ||||| |||| | |||||||||| ||||    
T  1091834 gttgactcaatcaaaattgacaaaaatgaccactattgcaaataggctaaatcttaaggggtc-aaaattgtagctttt 1091757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 21837303 - 21837354
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||| ||||||||||| |||||||||||||  |||| |||||||||||||||||    
T  21837303 ggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcc 21837354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 22067800 - 22067885
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatat--ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||||||||||  | |   |||||||||||||||| ||| |||  |||  |||||||||| ||||||    
T  22067800 gggggctaaaattgtagtttttgttcatataagagactaaaattgcaactttttcaaacttagagggataaaagtgcaccttagcc 22067885  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 1033363 - 1033322
Alignment:
Q  225 tacacacgtggcatgccaaatcagtgttgactcggtcaaaat 266  Q
    |||||| ||||||||||||||||| ||||||| |||||||||    
T  1033363 tacacatgtggcatgccaaatcagcgttgactaggtcaaaat 1033322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 28618024 - 28617946
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagtta 366  Q
    |||||||||||||| ||||||||||   ||||||| ||||||||| | |  |||| |||||||||||  ||||||||||||    
T  28618024 tgcaaaggggctaaatcttagggggc--aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 810806 - 810854
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaa 362  Q
    ||||||||||||||||| || | |||| ||||||||||| |||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 1033263 - 1033212
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||| ||||||||||| ||||| |||||| ||||||||||||| |||||||||    
T  1033263 ggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtacactttagc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 26829329 - 26829389
Alignment:
Q  330 ttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||| |||||| ||||| |||| ||| |||||||  ||||||||||||||||||    
T  26829329 ttcatagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcc 26829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 43029036 - 43029088
Alignment:
Q  318 ttgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggg 370  Q
    ||||||||||| ||| || |||| |||||| |||||||| |||||||||||||    
T  43029036 ttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagttaaggg 43029088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 1613 - 1439
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggcta 314  Q
    ||||| |||||||||| |||||||||||||||||  |||||| |||||||||||   |||| |||||    |||||| ||||||| |||||||||| | |    
T  1613 aatggttaattacacatgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtc-a 1515  T
Q  315 aaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||||||| | |||| |||||||||||||||| ||||| |||||||  ||||||||||| ||||||||||    
T  1514 aaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcc 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 17602 - 17470
Alignment:
Q  257 cggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaacttt 356  Q
    |||||||||||| |||||| || |   |||||||||||| |||||||| ||||||| ||||||||||||||||| | || |||| ||||||||||| |||    
T  17602 cggtcaaaattggtaaaaaagatcgaaattgcaaaggggataattctt-ggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagttt 17504  T
Q  357 ttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    || ||||||||||||| |||||||||||||||||    
T  17503 ttaaaagttaagggggaaaaagtgcactttagcc 17470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 18795 - 18877
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| |||||| |||||||||| | || |||  ||||||||||| ||||| ||||||| | ||| |||||||||||||||||    
T  18795 ggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 5442 - 5539
Alignment:
Q  292 ggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| ||||| |||||| ||||||||||||||||| | || |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  5442 ggggctaaatcttaagggggc-aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcc 5539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 4580 - 4442
Alignment:
Q  251 ttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgc 350  Q
    |||||| ||||||||| |   ||||||||||   ||| || |||||||| | ||||||||| |||||||||| ||||||| | || ||||  |||||||     
T  4580 ttgacttggtcaaaatcgaccaaaatgaccaaatttgtaatggggctaaattttagggggg-taaaattgtaatttttgtacttaaggggctaaaattgt 4482  T
Q  351 aactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    || ||||||||| ||| ||||| ||| |||||||||||||    
T  4481 aagtttttgaaaattaggggggaaaatgtgcactttagcc 4442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 3305 - 3408
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||||||||||| |||||||||  | |||||| |||||||||| | |||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  3305 ttgcaaaggggctaaatcttaggggacc-aaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcact 3402  T
Q  385 ttagcc 390  Q
    ||||||    
T  3403 ttagcc 3408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 60258 - 60090
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    ||||||||| |||||||||   ||||||  |||||| |||||||||||   |||| |||||    |||||||||||||| || ||||||| | |||||||    
T  60258 taattacacgcgtggcatgttcaatcagcattgacttggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtc-aaaattg 60160  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||| | |||| |||||||||||||||| ||||| |||||||  || |||||||||||||||||||    
T  60159 tagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagcc 60090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 389
Target Start/End: Original strand, 61392 - 61559
Alignment:
Q  221 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattg 320  Q
    |||||||||  |||||||| | | ||||  |||||| |||||||||||   |||| |||||    |||||| ||||||| || ||||||| | ||||||     
T  61392 taattacacgtgtggcatgtccagtcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggcc-aaaatta 61490  T
Q  321 tagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||||||||| | || ||||  |||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  61491 tagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 7412 - 7516
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    ||||||||||||||| |||||||||| | ||||||||||||| ||| |||| ||||||||||| | |||||||| ||| |||  |||||| |||||||||    
T  7412 ttgcaaaggggctaaatcttagggggtc-aaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcact 7510  T
Q  385 ttagcc 390  Q
    ||||||    
T  7511 ttagcc 7516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 7616 - 7538
Alignment:
Q  311 gctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||| ||| |||  ||||| ||||||||||||||||    
T  7616 gctaaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttataggggg-aaagtgcactttagcc 7538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 6438 - 6346
Alignment:
Q  294 ggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 387  Q
    |||||| |||||||||| | ||||||||||||||||| |||| ||||  ||||| | |||||||||||| ||||||| ||||||||||||||||    
T  6438 ggctaaatcttagggggtc-aaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 9045 - 9126
Alignment:
Q  308 ggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||| ||||||||||||||||| |||| | ||  |||||  ||||||||||||| |||||| || |||||||||||||||||    
T  9045 ggggccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaa-ttaaggaggaaaaagtgcactttagcc 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 19591 - 19488
Alignment:
Q  286 tgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 385  Q
    |||||||||| ||| |||||||||  | ||||||||||||||| | | || |||| |||||||||||  |||||||| |||||||||||||| |||||||    
T  19591 tgcaaaggggttaaatcttaggggatc-aaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactt 19493  T
Q  386 tagcc 390  Q
    |||||    
T  19492 tagcc 19488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 137 - 220
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||| |||||||| |||||  | |||  |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  137 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 13267 - 13193
Alignment:
Q  314 aaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    |||||||||||||| || |||| | |||||||||  ||||||||| |||||||  ||||||||||||||||||||||    
T  13267 aaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagtta--gggggaaaagtgcactttagcc 13193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 2483 - 2564
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaa-ctttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||||| ||||| || |||||||| | || ||||||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  2483 gggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 7106 - 7187
Alignment:
Q  307 gggggctaaaattgtagtttttgttcatatggggtcaaaattgcaa-ctttttgaaagttaaggggggaaaagtgcactttagc 389  Q
    |||||| ||||| || |||||||| | || ||||||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  7106 gggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 7187  T

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Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 23183 - 23081
Alignment:
Q  285 ttgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatggggtcaaaattgcaactttttgaaagttaaggggggaaaagtgcact 384  Q
    |||||| ||||||||  |||||||| || || ||||| ||||| || | ||  ||| ||||||||||| |||||||||||||  ||||||||||||||||    
T  23183 ttgcaatggggctaaagcttaggggagc-aagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcact 23087  T
Q  385 ttagcc 390  Q
    ||||||    
T  23086 ttagcc 23081  T

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Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 23943 - 23991
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||||||||||| || |  |||||||||||||||||    
T  23943 caaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagcc 23991  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 390
Target Start/End: Complemental strand, 37298 - 37148
Alignment:
Q  238 tgccaaatcagtgttgactcggtcaaaattgctaaaaatgaccactattgcaaaggggctaattcttaggggggctaaaattgtagtttttgttcatatg 337  Q
    ||||||||||  ||||||| |||||||||||   |||||||  |   || ||| |||||||| || ||||||| | |||||||| |||||||| | || |    
T  37298 tgccaaatcatcgttgactaggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggcc-aaaattgttgtttttgtacttagg 37200  T
Q  338 gggtcaaaattgc-aactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||||| || ||||| |||| ||  ||||||||||||||||||||||    
T  37199 gggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcactttagcc 37148  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 49137 - 49185
Alignment:
Q  342 caaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 390  Q
    ||||||||||| ||||| ||||||||||| ||||||||||| |||||||    
T  49137 caaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 49000 - 49038
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttg 253  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  49000 aatggttaattacacacgtggcatgccaaataagtgttg 49038  T

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Target: scaffold0045; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 48480 - 48427
Alignment:
Q  215 aatggctaattacacacgtggcatgccaaatcagtgttgactcggtcaaaattg 268  Q
    ||||| |||||||||||||||||||| ||||||   |||||| |||||||||||    
T  48480 aatggttaattacacacgtggcatgctaaatcaacattgacttggtcaaaattg 48427  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 371
Target Start/End: Original strand, 15706 - 15740
Alignment:
Q  337 ggggtcaaaattgcaactttttgaaagttaagggg 371  Q
    |||||||||||||||||||||| ||||||||||||    
T  15706 ggggtcaaaattgcaactttttaaaagttaagggg 15740  T

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