View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18898_low_8 (Length: 453)
Name: NF18898_low_8
Description: NF18898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18898_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 427; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 6 - 436
Target Start/End: Complemental strand, 104763 - 104333
Alignment:
| Q |
6 |
tgcgccaataagtttcaaactcaaaagggtttgcttaatggatacaagcacaccttttgatgttgttaccatttttactattctcttattatcataccct |
105 |
Q |
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| T |
104763 |
tgcgccaataagtttcaaactcaaaagggtttgcttaatggatacaagcacaccttttgatgttgttaccatttttactattctcttattatcataccct |
104664 |
T |
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| Q |
106 |
ttcgatatagcaaatgcaaactctgaaggtaagtaaagtacagtctcttttgttttgattgatacatacaaacaagcatacacataatctgaaagaaaga |
205 |
Q |
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| T |
104663 |
tttgatatagcaaatgcaaactctgaaggtaagtaaagtacagtctcttttgttttgattgatacatacaaacaagcatacacataatctgaaagaaaga |
104564 |
T |
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| Q |
206 |
atcttttgttttgatgttctgtctgtctgtctgatgaaaactaacaggtgatgccttgtatgcattcagaagagctgtaaaagacccaaataacattcta |
305 |
Q |
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| T |
104563 |
atcttttgttttgatgttctgtctgtctgtctgatgaaaactaacaggtgatgccttgtatgcattcagaagagctgtaaaagacccaaataacattcta |
104464 |
T |
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| Q |
306 |
cagagttgggaccccactttggtggatccttgtacatggtttcatgttacctgtgatcgtgataaccacgttactagactgtaactatcttttactttct |
405 |
Q |
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| T |
104463 |
cagagttgggaccccactttggtggatccttgtacatggtttcatgttacctgtgatcgtgataaccacgttactagactgtaactatcttttactttct |
104364 |
T |
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| Q |
406 |
cttcttttcttcaaccttaccaattattact |
436 |
Q |
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| T |
104363 |
cttcttttcttcaaccttaccaattattact |
104333 |
T |
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