View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18899_low_14 (Length: 302)

Name: NF18899_low_14
Description: NF18899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18899_low_14
NF18899_low_14
[»] scaffold0197 (1 HSPs)
scaffold0197 (200-283)||(25699-25782)
[»] chr8 (48 HSPs)
chr8 (200-283)||(17046010-17046093)
chr8 (200-283)||(39685413-39685496)
chr8 (200-280)||(17313541-17313621)
chr8 (200-283)||(14718857-14718940)
chr8 (200-283)||(27467702-27467785)
chr8 (200-283)||(34805779-34805862)
chr8 (200-283)||(7219369-7219452)
chr8 (200-283)||(16239168-16239251)
chr8 (204-283)||(41360980-41361059)
chr8 (200-283)||(43817964-43818047)
chr8 (200-285)||(2184410-2184495)
chr8 (200-281)||(44908488-44908569)
chr8 (200-280)||(44602938-44603017)
chr8 (200-283)||(36216576-36216659)
chr8 (200-283)||(11924757-11924841)
chr8 (200-283)||(16845018-16845101)
chr8 (200-281)||(36059276-36059358)
chr8 (200-281)||(37034816-37034898)
chr8 (200-281)||(38139303-38139385)
chr8 (200-280)||(169705-169786)
chr8 (200-280)||(6816024-6816105)
chr8 (200-283)||(26518796-26518879)
chr8 (200-279)||(39486028-39486108)
chr8 (200-281)||(1877578-1877659)
chr8 (200-280)||(2190647-2190728)
chr8 (200-272)||(42844281-42844352)
chr8 (202-272)||(38137721-38137791)
chr8 (200-281)||(34997523-34997604)
chr8 (200-272)||(11579194-11579266)
chr8 (200-272)||(38909288-38909360)
chr8 (200-268)||(39525458-39525526)
chr8 (200-259)||(41526324-41526383)
chr8 (200-257)||(39997991-39998048)
chr8 (200-271)||(15310398-15310470)
chr8 (200-271)||(15490767-15490839)
chr8 (210-281)||(44655059-44655130)
chr8 (200-262)||(42984002-42984064)
chr8 (236-273)||(1922389-1922426)
chr8 (200-272)||(45139050-45139122)
chr8 (200-262)||(12261469-12261532)
chr8 (233-272)||(20665625-20665663)
chr8 (200-255)||(27914929-27914984)
chr8 (200-255)||(27961348-27961403)
chr8 (200-256)||(14449611-14449667)
chr8 (200-244)||(27748864-27748908)
chr8 (236-272)||(30550991-30551026)
chr8 (233-281)||(33848724-33848772)
chr8 (236-272)||(44215740-44215775)
[»] chr7 (46 HSPs)
chr7 (200-283)||(10999102-10999185)
chr7 (200-283)||(17278144-17278227)
chr7 (200-283)||(27031229-27031312)
chr7 (200-283)||(29448717-29448800)
chr7 (200-283)||(40239897-40239980)
chr7 (200-283)||(41426953-41427036)
chr7 (202-283)||(23639417-23639498)
chr7 (200-283)||(1448090-1448173)
chr7 (200-283)||(18956298-18956381)
chr7 (200-283)||(38045647-38045730)
chr7 (200-283)||(40789169-40789252)
chr7 (200-278)||(12907906-12907984)
chr7 (202-280)||(37669271-37669349)
chr7 (202-283)||(45620639-45620720)
chr7 (200-283)||(32960796-32960879)
chr7 (200-280)||(43156185-43156264)
chr7 (200-283)||(4400065-4400149)
chr7 (200-283)||(4408036-4408119)
chr7 (200-272)||(41343320-41343392)
chr7 (200-281)||(4406627-4406709)
chr7 (200-273)||(44651882-44651955)
chr7 (200-281)||(47840722-47840803)
chr7 (211-280)||(4615384-4615454)
chr7 (200-280)||(6607088-6607169)
chr7 (200-281)||(21134356-21134436)
chr7 (200-272)||(20482280-20482352)
chr7 (200-272)||(36769226-36769298)
chr7 (200-272)||(5526108-5526177)
chr7 (213-272)||(4404295-4404354)
chr7 (201-272)||(5483406-5483477)
chr7 (200-272)||(4492435-4492506)
chr7 (223-281)||(20135099-20135158)
chr7 (233-272)||(43111035-43111074)
chr7 (200-276)||(23154632-23154707)
chr7 (200-256)||(40036027-40036083)
chr7 (233-272)||(19036364-19036402)
chr7 (252-283)||(19758160-19758191)
chr7 (233-272)||(20718234-20718272)
chr7 (233-272)||(29488481-29488519)
chr7 (233-272)||(33232659-33232697)
chr7 (233-272)||(34284801-34284839)
chr7 (211-269)||(3840021-3840079)
chr7 (236-280)||(16933505-16933550)
chr7 (236-280)||(16938888-16938933)
chr7 (236-272)||(20762915-20762950)
chr7 (200-256)||(36765592-36765648)
[»] chr6 (26 HSPs)
chr6 (200-283)||(3850216-3850299)
chr6 (200-283)||(18593610-18593693)
chr6 (201-283)||(33945824-33945906)
chr6 (200-283)||(559718-559801)
chr6 (200-283)||(20791537-20791620)
chr6 (200-283)||(24046560-24046643)
chr6 (200-283)||(28472212-28472295)
chr6 (200-283)||(32244368-32244451)
chr6 (203-281)||(6018577-6018656)
chr6 (203-272)||(6833553-6833622)
chr6 (200-272)||(5414562-5414634)
chr6 (200-272)||(34207003-34207075)
chr6 (200-272)||(34247755-34247827)
chr6 (202-272)||(10945711-10945781)
chr6 (200-281)||(7541098-7541179)
chr6 (200-256)||(19988908-19988964)
chr6 (200-272)||(24162794-24162866)
chr6 (200-272)||(29043209-29043281)
chr6 (205-272)||(18314008-18314074)
chr6 (200-281)||(29859401-29859483)
chr6 (200-272)||(173062-173134)
chr6 (200-272)||(17505488-17505560)
chr6 (200-267)||(8866970-8867037)
chr6 (200-273)||(3053915-3053987)
chr6 (233-272)||(247420-247458)
chr6 (233-272)||(12582491-12582529)
[»] chr5 (56 HSPs)
chr5 (200-283)||(2475274-2475357)
chr5 (200-283)||(6928360-6928443)
chr5 (203-283)||(24027863-24027943)
chr5 (200-280)||(31884665-31884745)
chr5 (200-283)||(16050774-16050857)
chr5 (200-283)||(24758971-24759054)
chr5 (200-283)||(26379203-26379286)
chr5 (200-283)||(31939835-31939918)
chr5 (200-281)||(42110679-42110760)
chr5 (200-283)||(4374857-4374940)
chr5 (200-283)||(32261715-32261798)
chr5 (202-283)||(3297827-3297908)
chr5 (200-280)||(665562-665642)
chr5 (200-283)||(27176476-27176560)
chr5 (200-283)||(5589467-5589550)
chr5 (200-283)||(42322865-42322948)
chr5 (200-281)||(2530075-2530157)
chr5 (200-281)||(39803853-39803934)
chr5 (200-264)||(25821231-25821295)
chr5 (200-272)||(40308340-40308412)
chr5 (200-281)||(789026-789108)
chr5 (200-272)||(28746318-28746390)
chr5 (200-283)||(29383727-29383811)
chr5 (200-278)||(15976476-15976554)
chr5 (201-281)||(10042782-10042863)
chr5 (200-281)||(19361641-19361722)
chr5 (202-282)||(36088567-36088648)
chr5 (200-276)||(36083790-36083866)
chr5 (202-281)||(40506804-40506884)
chr5 (202-281)||(42416790-42416870)
chr5 (200-268)||(43396524-43396592)
chr5 (200-281)||(3246819-3246901)
chr5 (200-281)||(29874668-29874750)
chr5 (200-280)||(790061-790142)
chr5 (200-272)||(8314829-8314901)
chr5 (206-281)||(31958390-31958465)
chr5 (200-272)||(37147067-37147139)
chr5 (200-268)||(42111809-42111877)
chr5 (205-283)||(28990943-28991022)
chr5 (200-272)||(7536645-7536717)
chr5 (200-272)||(19270905-19270977)
chr5 (200-281)||(29382576-29382659)
chr5 (200-280)||(30503532-30503613)
chr5 (200-280)||(30543875-30543956)
chr5 (208-271)||(1060706-1060768)
chr5 (200-262)||(16166292-16166354)
chr5 (200-261)||(35380505-35380566)
chr5 (200-267)||(14720185-14720252)
chr5 (233-272)||(37461872-37461910)
chr5 (200-270)||(3213231-3213300)
chr5 (205-255)||(15875756-15875806)
chr5 (200-241)||(30503759-30503800)
chr5 (200-241)||(30544102-30544143)
chr5 (206-247)||(39782983-39783024)
chr5 (200-244)||(14205441-14205485)
chr5 (200-272)||(18041185-18041256)
[»] chr4 (60 HSPs)
chr4 (200-283)||(1166629-1166712)
chr4 (200-283)||(1169111-1169194)
chr4 (200-283)||(7400209-7400292)
chr4 (200-283)||(10137883-10137966)
chr4 (200-283)||(13890996-13891079)
chr4 (200-283)||(32206596-32206679)
chr4 (200-283)||(40950935-40951018)
chr4 (200-283)||(53274618-53274701)
chr4 (200-283)||(55188160-55188243)
chr4 (200-283)||(6940178-6940261)
chr4 (200-283)||(7365786-7365869)
chr4 (200-283)||(27288474-27288557)
chr4 (200-283)||(34264632-34264715)
chr4 (200-283)||(55208488-55208571)
chr4 (200-285)||(11200821-11200906)
chr4 (200-281)||(28116843-28116924)
chr4 (200-283)||(11967004-11967087)
chr4 (200-283)||(26111368-26111451)
chr4 (200-283)||(55991809-55991892)
chr4 (200-282)||(17624651-17624733)
chr4 (200-283)||(36190059-36190142)
chr4 (200-281)||(8847929-8848011)
chr4 (200-281)||(23628826-23628908)
chr4 (200-281)||(18138327-18138408)
chr4 (200-283)||(29099625-29099708)
chr4 (200-280)||(24303803-24303884)
chr4 (200-272)||(11180909-11180981)
chr4 (200-272)||(41144305-41144377)
chr4 (200-272)||(43117519-43117591)
chr4 (200-281)||(17976438-17976520)
chr4 (200-281)||(20681186-20681268)
chr4 (200-281)||(49125536-49125618)
chr4 (200-280)||(40665513-40665593)
chr4 (200-272)||(22556965-22557037)
chr4 (200-272)||(26097651-26097723)
chr4 (200-272)||(46045795-46045867)
chr4 (200-282)||(32200716-32200799)
chr4 (200-281)||(37873646-37873728)
chr4 (200-272)||(40849729-40849801)
chr4 (203-272)||(8654318-8654386)
chr4 (233-278)||(34663865-34663910)
chr4 (200-272)||(346607-346679)
chr4 (202-258)||(51153499-51153555)
chr4 (205-272)||(39651736-39651803)
chr4 (200-262)||(32139419-32139481)
chr4 (200-281)||(51187608-51187690)
chr4 (211-280)||(24631113-24631181)
chr4 (233-280)||(45472470-45472518)
chr4 (210-272)||(28361503-28361565)
chr4 (200-273)||(8151202-8151274)
chr4 (250-283)||(45019229-45019262)
chr4 (233-281)||(52620629-52620678)
chr4 (200-268)||(30071346-30071414)
chr4 (200-248)||(40952045-40952093)
chr4 (233-272)||(10262031-10262069)
chr4 (233-272)||(21562386-21562424)
chr4 (233-272)||(24080102-24080140)
chr4 (233-272)||(43329907-43329945)
chr4 (210-260)||(25881932-25881982)
chr4 (236-272)||(26926975-26927010)
[»] chr3 (59 HSPs)
chr3 (200-283)||(30269084-30269167)
chr3 (200-283)||(45599267-45599350)
chr3 (200-283)||(54510387-54510470)
chr3 (200-282)||(29500325-29500407)
chr3 (200-283)||(4018908-4018991)
chr3 (200-283)||(14587387-14587470)
chr3 (200-283)||(7040873-7040956)
chr3 (200-283)||(13450264-13450347)
chr3 (200-283)||(33932486-33932569)
chr3 (200-283)||(36592216-36592299)
chr3 (200-283)||(46757551-46757633)
chr3 (200-283)||(48545101-48545184)
chr3 (200-283)||(52461019-52461102)
chr3 (200-283)||(54741795-54741878)
chr3 (202-283)||(2909424-2909505)
chr3 (202-283)||(29450651-29450732)
chr3 (200-280)||(20849404-20849484)
chr3 (200-283)||(22347079-22347163)
chr3 (200-283)||(26881613-26881696)
chr3 (204-283)||(52674775-52674853)
chr3 (200-282)||(43316516-43316598)
chr3 (200-281)||(12101464-12101545)
chr3 (200-272)||(53022669-53022741)
chr3 (200-283)||(7265047-7265130)
chr3 (200-283)||(19536699-19536782)
chr3 (200-281)||(39721252-39721334)
chr3 (200-281)||(38361743-38361825)
chr3 (200-280)||(35690212-35690293)
chr3 (200-272)||(41990764-41990836)
chr3 (200-272)||(46090118-46090190)
chr3 (200-272)||(50739157-50739229)
chr3 (200-272)||(50773626-50773698)
chr3 (200-283)||(13337091-13337173)
chr3 (202-272)||(44762725-44762795)
chr3 (202-272)||(47719487-47719557)
chr3 (200-283)||(37413560-37413644)
chr3 (200-283)||(42187749-42187833)
chr3 (202-272)||(36987740-36987810)
chr3 (202-272)||(37013179-37013249)
chr3 (202-272)||(48961122-48961192)
chr3 (200-281)||(54203746-54203828)
chr3 (206-281)||(12996818-12996893)
chr3 (200-272)||(46850711-46850783)
chr3 (200-272)||(54113415-54113487)
chr3 (200-283)||(50933196-50933279)
chr3 (200-260)||(33899842-33899902)
chr3 (200-271)||(15496470-15496541)
chr3 (200-281)||(35906684-35906766)
chr3 (221-283)||(875825-875884)
chr3 (200-272)||(20996334-20996406)
chr3 (200-262)||(46088720-46088782)
chr3 (200-272)||(54195682-54195754)
chr3 (233-272)||(44075418-44075456)
chr3 (234-272)||(916278-916315)
chr3 (200-262)||(8238911-8238972)
chr3 (200-262)||(22762296-22762357)
chr3 (211-256)||(10617639-10617684)
chr3 (211-272)||(54835729-54835790)
chr3 (236-272)||(34433767-34433803)
[»] chr2 (36 HSPs)
chr2 (200-283)||(970945-971028)
chr2 (200-283)||(1835677-1835760)
chr2 (200-283)||(5166258-5166341)
chr2 (200-283)||(7233015-7233098)
chr2 (200-283)||(8878111-8878194)
chr2 (200-283)||(31972274-31972357)
chr2 (200-280)||(24926085-24926165)
chr2 (200-283)||(18166833-18166916)
chr2 (200-283)||(36085947-36086030)
chr2 (200-282)||(8683652-8683734)
chr2 (200-281)||(7274664-7274745)
chr2 (200-283)||(3324264-3324347)
chr2 (202-280)||(4631203-4631281)
chr2 (200-281)||(3243295-3243377)
chr2 (202-272)||(34912654-34912724)
chr2 (200-281)||(38879129-38879211)
chr2 (200-281)||(668294-668375)
chr2 (200-280)||(36078556-36078637)
chr2 (200-272)||(3079720-3079792)
chr2 (200-272)||(10120612-10120684)
chr2 (200-272)||(40202218-40202290)
chr2 (200-283)||(17032813-17032896)
chr2 (200-272)||(35423789-35423861)
chr2 (200-272)||(41452818-41452890)
chr2 (200-272)||(45474725-45474797)
chr2 (200-272)||(1117981-1118055)
chr2 (205-280)||(9799330-9799405)
chr2 (200-246)||(20313248-20313294)
chr2 (200-281)||(2180011-2180093)
chr2 (205-262)||(38709708-38709765)
chr2 (233-283)||(17051171-17051221)
chr2 (233-272)||(3708454-3708492)
chr2 (233-272)||(11868924-11868962)
chr2 (233-272)||(35360317-35360355)
chr2 (200-243)||(38959644-38959687)
chr2 (200-262)||(1692624-1692685)
[»] chr1 (47 HSPs)
chr1 (200-283)||(11583148-11583231)
chr1 (200-283)||(17585507-17585590)
chr1 (200-283)||(25659810-25659893)
chr1 (200-283)||(33373820-33373903)
chr1 (200-283)||(33642602-33642685)
chr1 (200-283)||(33895217-33895300)
chr1 (200-283)||(39327043-39327126)
chr1 (200-283)||(45104172-45104255)
chr1 (201-283)||(43120780-43120862)
chr1 (200-283)||(3265108-3265191)
chr1 (200-283)||(7833537-7833620)
chr1 (200-283)||(9574853-9574936)
chr1 (200-283)||(33818094-33818177)
chr1 (200-283)||(33831925-33832008)
chr1 (200-283)||(33877562-33877645)
chr1 (200-283)||(33894087-33894170)
chr1 (200-283)||(36165521-36165604)
chr1 (200-283)||(41901700-41901783)
chr1 (200-283)||(47037131-47037214)
chr1 (205-283)||(40432208-40432286)
chr1 (200-280)||(11754228-11754308)
chr1 (200-280)||(38802300-38802380)
chr1 (200-283)||(14487324-14487407)
chr1 (200-283)||(46588091-46588174)
chr1 (200-283)||(17249026-17249110)
chr1 (200-272)||(24473551-24473623)
chr1 (200-272)||(43119114-43119186)
chr1 (201-283)||(36952714-36952797)
chr1 (200-283)||(39879140-39879224)
chr1 (200-272)||(43123042-43123113)
chr1 (200-281)||(46040486-46040568)
chr1 (200-283)||(1322525-1322609)
chr1 (200-281)||(18091268-18091348)
chr1 (200-283)||(16097336-16097417)
chr1 (210-281)||(31638425-31638496)
chr1 (202-272)||(34078285-34078355)
chr1 (206-281)||(23730301-23730376)
chr1 (208-272)||(34652277-34652341)
chr1 (202-258)||(17366355-17366411)
chr1 (200-243)||(31215864-31215907)
chr1 (200-243)||(31221619-31221662)
chr1 (200-272)||(7308331-7308404)
chr1 (202-258)||(39729206-39729262)
chr1 (200-267)||(11606467-11606534)
chr1 (200-262)||(23910914-23910975)
chr1 (202-280)||(33932911-33932988)
chr1 (204-272)||(43124356-43124424)
[»] scaffold0166 (1 HSPs)
scaffold0166 (200-283)||(1465-1548)
[»] scaffold0481 (2 HSPs)
scaffold0481 (200-280)||(4512-4592)
scaffold0481 (200-280)||(7442-7522)
[»] scaffold0178 (1 HSPs)
scaffold0178 (200-272)||(7292-7364)
[»] scaffold0024 (2 HSPs)
scaffold0024 (202-280)||(90463-90542)
scaffold0024 (202-273)||(110529-110600)
[»] scaffold0198 (1 HSPs)
scaffold0198 (200-272)||(15261-15333)
[»] scaffold0244 (1 HSPs)
scaffold0244 (200-281)||(7574-7656)
[»] scaffold0768 (1 HSPs)
scaffold0768 (203-272)||(6306-6375)
[»] scaffold0020 (1 HSPs)
scaffold0020 (200-283)||(132647-132730)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-272)||(138031-138101)
[»] scaffold0003 (1 HSPs)
scaffold0003 (200-255)||(229101-229156)
[»] scaffold0318 (1 HSPs)
scaffold0318 (200-244)||(1083-1127)


Alignment Details
Target: scaffold0197 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 25782 - 25699
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25782 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 25699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 17046010 - 17046093
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17046010 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 17046093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 39685496 - 39685413
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39685496 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 39685413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 17313541 - 17313621
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  17313541 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 17313621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 14718940 - 14718857
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14718940 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattattttttggtggtgtctg 14718857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 27467785 - 27467702
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  27467785 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatttttttttggtggtgtctg 27467702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 34805862 - 34805779
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34805862 agttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 34805779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 7219452 - 7219369
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7219452 agttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtctg 7219369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 16239168 - 16239251
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  16239168 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttatagtggtgtctg 16239251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 41361059 - 41360980
Alignment:
Q  204 ctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41361059 ctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtctg 41360980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 43817964 - 43818047
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  43817964 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttattattttttggtggtgtctg 43818047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 2184410 - 2184495
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctgtg 285  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2184410 agttctaaagttattttaaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattattttttggtggtgtctgtg 2184495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 44908569 - 44908488
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  44908569 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttgtggtgtc 44908488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 44602938 - 44603017
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  44602938 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta-tttttggtggtgt 44603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 36216576 - 36216659
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  36216576 agttctaaagttatttttgagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttttgtggtgtctg 36216659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 11924841 - 11924757
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttt-ttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  11924841 agttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttcttggtggtgtctg 11924757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 16845101 - 16845018
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| || ||||||    
T  16845101 agttctaaagttatttttgaattaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttgctgatgtctg 16845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 36059276 - 36059358
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  36059276 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 36059358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 37034898 - 37034816
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  37034898 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 37034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 38139385 - 38139303
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  38139385 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 38139303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 169705 - 169786
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  169705 agttctaaagttatttttaagttaaaaactgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 169786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 6816105 - 6816024
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  6816105 agttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 6816024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 26518796 - 26518879
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  26518796 agttctaaa-ttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtctg 26518879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 39486028 - 39486108
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtg 279  Q
    ||||||| |||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  39486028 agttctacagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattattttggtggtg 39486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 1877578 - 1877659
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||| ||||||||| ||||||||  ||| |||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  1877578 agttctaacgttatttttaagttaaaaattgtttggcaaaatattgtacaaaactttgaatttattatttttttgtgctgtc 1877659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 2190647 - 2190728
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    ||||||||| |||||||  ||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  2190647 agttctaaaattattttgaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattatttttttggtggtgt 2190728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 42844352 - 42844281
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||    
T  42844352 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttaaatttattatttttt 42844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 38137721 - 38137791
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| ||  |||||||||||| |||||||||||||||||||||||    
T  38137721 ttctaaagttatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttattatttttt 38137791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 34997604 - 34997523
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    ||||||| |||||||||| ||||||||| ||| |||||||||||||||| ||| |  |||||||||||||||| ||||||||    
T  34997604 agttctatagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattaggaatttattatttttttgtggtgtc 34997523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 11579266 - 11579194
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| ||| |||||||||||| ||| ||||||||| |||||||||    
T  11579266 agttctaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaaatttgaatttgttatttttt 11579194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 38909360 - 38909288
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||  || ||||||||||||| ||| |||||||||||||||||||    
T  38909360 agttctaaagttatttttaagttaaaagttgcttgacaaaatattgtacaaaattttgaatttattatttttt 38909288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 39525526 - 39525458
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt 268  Q
    |||||||||||||||||| | ||||||| ||| |||||||||||||| | |||||||||||||||||||    
T  39525526 agttctaaagttatttttaatttaaaagttgtttggcaaaatattgtgcaaaactttgaatttattatt 39525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 41526383 - 41526324
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaa 259  Q
    |||||||||||||||||| ||||||||| ||| | |||||||||||||| ||||||||||    
T  41526383 agttctaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaa 41526324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 39998048 - 39997991
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttg 257  Q
    |||||||||||||||||||||||||||| ||| | |||||| ||||||| ||||||||    
T  39998048 agttctaaagttatttttgagttaaaagttgtttagcaaaaaattgtacaaaactttg 39997991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 15310470 - 15310398
Alignment:
Q  200 agttctaaagttatttttgagttaaaagct-gtgtggcaaaatattgtacgaaactttgaatttattattttt 271  Q
    ||||||||| |||||||| ||||||||| | || |||||||||||||||  ||||||||||||| ||||||||    
T  15310470 agttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaatttcttattttt 15310398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 15490839 - 15490767
Alignment:
Q  200 agttctaaagttatttttgagttaaaagct-gtgtggcaaaatattgtacgaaactttgaatttattattttt 271  Q
    ||||||||| |||||||| ||||||||| | || |||||||||||||||  ||||||||||||| ||||||||    
T  15490839 agttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaatttcttattttt 15490767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 44655130 - 44655059
Alignment:
Q  210 ttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||| ||| ||||| ||| ||||||||| || ||| |||||||||||| |||||||||| ||||||||    
T  44655130 ttatttttaagtcaaaagttgtttggcaaaattttatacaaaactttgaattaattatttttttgtggtgtc 44655059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 42984064 - 42984002
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||||||||||||||||| ||||||||| ||| ||| |||||||||||| |||| || |||||    
T  42984064 agttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaacatttaattt 42984002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 1922426 - 1922389
Alignment:
Q  236 caaaatattgtacgaaactttgaatttattattttttg 273  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  1922426 caaaatattgtacaaaactttgaatttattattttttg 1922389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 45139050 - 45139122
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||||||||| ||||||||| |||  ||||||||||||||| ||| ||||| ||| || ||||||    
T  45139050 agttttaaagttatttttaagttaaaagttgttcggcaaaatattgtacaaaattttgatttttttttttttt 45139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 12261469 - 12261532
Alignment:
Q  200 agttctaaagttatttttgagttaaaa-gctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||| ||||||||||||| |||||||| | ||| || ||||||||||||| |||||||||||||    
T  12261469 agttttaaagttatttttaagttaaaaagttgtttgacaaaatattgtacaaaactttgaattt 12261532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 20665625 - 20665663
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  20665625 tggcaaaatattgtac-aaactttgaatttattatttttt 20665663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 27914984 - 27914929
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactt 255  Q
    |||| |||||||| |||| ||||||||| ||| |||||||||||||||| ||||||    
T  27914984 agttttaaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 27961403 - 27961348
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactt 255  Q
    |||| |||||||| |||| ||||||||| ||| |||||||||||||||| ||||||    
T  27961403 agttttaaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 14449611 - 14449667
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaacttt 256  Q
    ||||||||||||||||||  |||||||| ||| |  ||||||||||||| |||||||    
T  14449611 agttctaaagttatttttatgttaaaagttgtttaacaaaatattgtacaaaacttt 14449667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 27748908 - 27748864
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatatt 244  Q
    |||| ||||||||||||| ||||||||| ||| ||||||||||||    
T  27748908 agttttaaagttatttttaagttaaaagttgtttggcaaaatatt 27748864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 30550991 - 30551026
Alignment:
Q  236 caaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| |||||||||||||||||||||||    
T  30550991 caaaatattgtac-aaactttgaatttattatttttt 30551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 33848724 - 33848772
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||| ||||||||||||| || |||| | ||||||||    
T  33848724 tggcaaaatattgtacaaaactttgaatttttttttttgttgtggtgtc 33848772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 44215740 - 44215775
Alignment:
Q  236 caaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| |||||||||||||||||||||||    
T  44215740 caaaatattgtac-aaactttgaatttattatttttt 44215775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 10999185 - 10999102
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10999185 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 10999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 17278227 - 17278144
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17278227 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 17278144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 27031229 - 27031312
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27031229 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 27031312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 29448717 - 29448800
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29448717 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 29448800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 40239897 - 40239980
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40239897 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 40239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 41427036 - 41426953
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41427036 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 41426953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 23639417 - 23639498
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23639417 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 23639498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 1448173 - 1448090
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1448173 agttctaaagctatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 1448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 18956298 - 18956381
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  18956298 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtctg 18956381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 38045730 - 38045647
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  38045730 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaagctttgaatttattattttttggtggtgtctg 38045647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 40789252 - 40789169
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40789252 agttataaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 40789169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 12907984 - 12907906
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggt 278  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  12907984 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 12907906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 37669271 - 37669349
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37669271 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 37669349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 45620720 - 45620639
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45620720 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 45620639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 32960796 - 32960879
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  32960796 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttgatagtgtctg 32960879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 43156264 - 43156185
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43156264 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaa-ttattattttttggtggtgt 43156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 4400065 - 4400149
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||||||| |||||||||||||| || |||||||||||||||||    
T  4400065 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttaatatttttttggtggtgtctg 4400149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 4408036 - 4408119
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattat-tttttggtggtgtctg 283  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  4408036 agttttaaagttatttttaagttaaaagctgtttggcaaaatattgta-taaactttgaatttattatctttttggtggtgtctg 4408119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 41343320 - 41343392
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||| | ||| |||||||||||||||| |||||||||||||||||||||||    
T  41343320 agttctaaagttatttttaagttaaatgttgtttggcaaaatattgtacaaaactttgaatttattatttttt 41343392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 4406627 - 4406709
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    ||||| ||||||| |||| ||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  4406627 agttccaaagttaattttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 4406709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 44651882 - 44651955
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttg 273  Q
    |||||||||||||||||| ||||||||| ||| ||  |||||||||||| ||||||||||||||||||||||||    
T  44651882 agttctaaagttatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttattattttttg 44651955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 47840803 - 47840722
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||||||| |||||||||||||| ||||||||  |||||||    
T  47840803 agttctaaagttatttttaagttgaaagttgtttggcaaaatattgtacaaaactttgaatttagtatttttttatggtgtc 47840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 4615454 - 4615384
Alignment:
Q  211 tatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgt 280  Q
    ||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4615454 tatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 4615384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 6607169 - 6607088
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgt 280  Q
    ||||||||| |||||||| |||||||| |||| |||||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  6607169 agttctaaatttatttttaagttaaaatctgtttggcaaaatattatacaaaactttaaatttattatttttttggtggtgt 6607088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 21134356 - 21134436
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||| |||| || |||||||| ||||||    
T  21134356 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttg-atttttttttttttggcggtgtc 21134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 20482352 - 20482280
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||| ||||| | ||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  20482352 agttttaaagttttttttaatttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 20482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 36769298 - 36769226
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||  |||| ||||||| |||||||||||||||    
T  36769298 agttctaaagttatttttaagttaaaagttgtttggcaaaataaagtacaaaactttaaatttattatttttt 36769226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 5526177 - 5526108
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| |   || ||||||||||||| |||||||||||||||||||||||    
T  5526177 agttctaaagttatttttaagttaaaagtt---tgacaaaatattgtacaaaactttgaatttattatttttt 5526108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 4404354 - 4404295
Alignment:
Q  213 tttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||| ||||||||| ||| |||||||||||||||| |||| ||||||||||||||||||    
T  4404354 tttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatttattatttttt 4404295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 5483477 - 5483406
Alignment:
Q  201 gttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||||||||| ||||||||| ||| || ||||||    
T  5483477 gttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaactttgatttttttttttttt 5483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 4492435 - 4492506
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||| ||||||||  | ||||||| | | |||||||||||||||| |||||||||||||||||||||||    
T  4492435 agttctaaggttattttaaa-ttaaaagttatttggcaaaatattgtacaaaactttgaatttattatttttt 4492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 20135099 - 20135158
Alignment:
Q  223 aaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    ||||| ||| |||||||||||||||| |||||||||||||| || |||||||||||||||    
T  20135099 aaaagttgtttggcaaaatattgtacaaaactttgaatttaatatttttttggtggtgtc 20135158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 43111074 - 43111035
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43111074 tggcaaaatattgtacaaaactttgaatttattatttttt 43111035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 23154707 - 23154632
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtg 276  Q
    |||||||||||||||||  ||||||||| ||| |||||||||||||||| ||||| ||| ||| || |||| |||||    
T  23154707 agttctaaagttatttta-agttaaaagttgtttggcaaaatattgtacaaaactatgattttttttttttgtggtg 23154632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 40036027 - 40036083
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaacttt 256  Q
    |||| ||||||||||||| ||||||||| | | |||||||||||||||| |||||||    
T  40036027 agttttaaagttatttttaagttaaaagttttttggcaaaatattgtacaaaacttt 40036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 19036364 - 19036402
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  19036364 tggcaaaatattgtac-aaactttgaatttattatttttt 19036402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 283
Target Start/End: Original strand, 19758160 - 19758191
Alignment:
Q  252 actttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||||||    
T  19758160 actttgaatttattattttttggtggtgtctg 19758191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 20718272 - 20718234
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  20718272 tggcaaaatattgtac-aaactttgaatttattatttttt 20718234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 29488519 - 29488481
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  29488519 tggcaaaatattgtac-aaactttgaatttattatttttt 29488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 33232659 - 33232697
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  33232659 tggcaaaatattgtac-aaactttgaatttattatttttt 33232697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 34284801 - 34284839
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  34284801 tggcaaaatattgtac-aaactttgaatttattatttttt 34284839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 3840079 - 3840021
Alignment:
Q  211 tatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattt 269  Q
    ||||||| ||||||||| ||| || ||||||||||||| ||||||||||| || |||||    
T  3840079 tatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatctaatattt 3840021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 16933505 - 16933550
Alignment:
Q  236 caaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||    
T  16933505 caaaatattgtacaaaacattgaatttattatttttttggtggtgt 16933550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 16938888 - 16938933
Alignment:
Q  236 caaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||    
T  16938888 caaaatattgtacaaaacattgaatttattatttttttggtggtgt 16938933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 20762950 - 20762915
Alignment:
Q  236 caaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20762950 caaaatattgtac-aaactttgaatttattatttttt 20762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 36765648 - 36765592
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaacttt 256  Q
    |||||||||||||||||| ||||||||| ||| || |||||||  |||| |||||||    
T  36765648 agttctaaagttatttttaagttaaaagttgtttgacaaaataaagtacaaaacttt 36765592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 3850299 - 3850216
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3850299 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 3850216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 18593610 - 18593693
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18593610 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 18593693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 33945824 - 33945906
Alignment:
Q  201 gttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33945824 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 33945906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 559801 - 559718
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  559801 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttctggtggtgtctg 559718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 20791620 - 20791537
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  20791620 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtctg 20791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 24046560 - 24046643
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  24046560 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatcctttggtggtgtctg 24046643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 28472295 - 28472212
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28472295 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 28472212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 32244451 - 32244368
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32244451 agttctacagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 32244368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 6018577 - 6018656
Alignment:
Q  203 tctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  6018577 tctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttaaatttattatttttttggtggtgtc 6018656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 6833622 - 6833553
Alignment:
Q  203 tctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||| |||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  6833622 tctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 6833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 5414562 - 5414634
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||| ||||||||| |||||    
T  5414562 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttttaatttattaattttt 5414634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 34207003 - 34207075
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| ||| |||||||||||| ||| |||||||||||||||||||    
T  34207003 agttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaattttgaatttattatttttt 34207075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 34247755 - 34247827
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| ||  |||||||||||| |||||||||||||||||||||||    
T  34247755 agttctaaagttatttttaagttaaaagttgtttgaaaaaatattgtacaaaactttgaatttattatttttt 34247827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 10945781 - 10945711
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||| | ||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||    
T  10945781 ttctaaagttatttctaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 10945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 7541179 - 7541098
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| ||||||||| |||||| |||| || |||||||||||||||  |||||||    
T  7541179 agttctaaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaacattcaatttattatttttttctggtgtc 7541098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 19988964 - 19988908
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaacttt 256  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  19988964 agttctaaagttatttttaagttaaaagttgtgtggcaaaatattgtacaaaacttt 19988908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 24162866 - 24162794
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||| ||||| ||| |||||||||||| ||| ||| |||||||||||||||||||    
T  24162866 agttctaaagttatttttaagtaaaaagttgtttggcaaaatattatacaaaattttgaatttattatttttt 24162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 29043281 - 29043209
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||||||  |||||||||||| || ||||||    
T  29043281 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacataactttgaattttttttttttt 29043209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 18314074 - 18314008
Alignment:
Q  205 taaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| | ||||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  18314074 taaagttatttttaatttaaatgttgtgtggcaaaatattgtac-aaactttgaatttattatttttt 18314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 29859483 - 29859401
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    ||||||||  |||||||| ||||||||| ||| || ||||||||||||  ||||||||||||||||||| |||||||||||||    
T  29859483 agttctaagcttatttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttattatttttttggtggtgtc 29859401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 173062 - 173134
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||| |||||||| ||||||||| ||| || ||||||||| ||| |||||||| ||||||||||||||    
T  173062 agttctaaaattatttttaagttaaaagttgtttgacaaaatattatacaaaactttgtatttattatttttt 173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 17505560 - 17505488
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| ||  |||||||| ||| ||||||||||||||| |||||||    
T  17505560 agttctaaagttatttttaagttaaaagttgtttgataaaatattatacaaaactttgaatttataatttttt 17505488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 8867037 - 8866970
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattat 267  Q
    |||| ||||| ||||||| ||||||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  8867037 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtatgaagctttgaatttattat 8866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 3053915 - 3053987
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttg 273  Q
    |||| ||||| ||||||| ||||||| | ||| |||||||||||||||| ||||||| ||||||||||||||||    
T  3053915 agttttaaagctatttttaagttaaatgttgtttggcaaaatattgtac-aaactttaaatttattattttttg 3053987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 247458 - 247420
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  247458 tggcaaaatattgtac-aaactttgaatttattatttttt 247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 12582491 - 12582529
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  12582491 tggcaaaatattgtac-aaactttgaatttattatttttt 12582529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 2475274 - 2475357
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2475274 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 2475357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 6928360 - 6928443
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6928360 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 6928443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 24027863 - 24027943
Alignment:
Q  203 tctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24027863 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 24027943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 31884665 - 31884745
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  31884665 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 31884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 16050774 - 16050857
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16050774 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaaattattattttttggtggtgtctg 16050857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 24759054 - 24758971
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  24759054 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtctg 24758971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 26379286 - 26379203
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  26379286 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtctg 26379203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 31939835 - 31939918
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31939835 agttctaaagttatttttgagttaaaagcagtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 31939918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 42110760 - 42110679
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42110760 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtc 42110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 4374857 - 4374940
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  4374857 agttctaaagttatttttgagttaaaagttgtttggcaagatattgtacaaaactttgaatttattattttttggtggtgtctg 4374940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 32261715 - 32261798
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  32261715 agttctaaagttatttttgagttaaaagctgtttgataaaatattgtacaaaactttgaatttattattttttggtggtgtctg 32261798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 3297827 - 3297908
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  3297827 ttctaaagttatttttgagttaaaagctgtttggcaaaataatgtataaaactttgaatttattattttttggtggtgtctg 3297908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 665562 - 665642
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  665562 agttctaaagttatttttgagttaaaagctgttcggcaaaatattatacaaaactttgaatttattattttttggtggtgt 665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 27176476 - 27176560
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  27176476 agttctaaagttatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtctg 27176560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 5589467 - 5589550
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  5589467 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttatcattttttggtggtgtctg 5589550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 42322948 - 42322865
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||| |||||||||    
T  42322948 agttctaaagttatttttgagttaaaagctgtttcgtaaaatattgtacaaaactttgaatttattattttttgatggtgtctg 42322865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 2530157 - 2530075
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  2530157 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 2530075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 39803853 - 39803934
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  39803853 agttctaaagttatttttaagttaaacgttgtttggcaaaatattgtacaaaactttgaatttattattttttggttgtgtc 39803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 25821295 - 25821231
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttat 264  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  25821295 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 25821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 40308412 - 40308340
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  40308412 agttctaaagttatttttaagttaaaagctgtttggcaaaatagtgtacaaaactttgaatttattatttttt 40308340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 789026 - 789108
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    ||||||||| |||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  789026 agttctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 789108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 28746318 - 28746390
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  28746318 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtataaaactttgaatttattatttttt 28746390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 29383727 - 29383811
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    ||||||| |||||||||||||||||||||||| || ||||| ||||||  ||||||||||||||||| |||||||||||||||||    
T  29383727 agttctatagttatttttgagttaaaagctgtttgacaaaacattgtaaaaaactttgaatttattatttttttggtggtgtctg 29383811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 15976554 - 15976476
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggt 278  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||| || |||||||| | || ||||||||||||    
T  15976554 agttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaatctttgaatctttttttttttggtggt 15976476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 10042863 - 10042782
Alignment:
Q  201 gttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    ||||| ||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  10042863 gttctgaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 10042782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 19361722 - 19361641
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||| ||| || |||||||||| ||||    
T  19361722 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgattttttttttttttggtgatgtc 19361641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 36088648 - 36088567
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtct 282  Q
    |||||||||||||||| ||| ||||||||| || ||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  36088648 ttctaaagttatttttaagtaaaaagctgtttgacaaaatattgttcaaaactttgaatttattatttttttggtggtgtct 36088567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 36083866 - 36083790
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtg 276  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||| || |||| |||||    
T  36083866 agttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaaaactttgaatttttttttttgtggtg 36083790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 40506804 - 40506884
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||| ||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  40506804 ttcttaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 40506884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 42416870 - 42416790
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||| ||||||||| ||| |  ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  42416870 ttctaaagttatttttaagttaaaagttgtttcacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 42416790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 43396592 - 43396524
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt 268  Q
    |||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||||    
T  43396592 agttctaaagttatttttaagttagaagttgtttggcaaaatattgtacaaaactttgaatttattatt 43396524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 3246901 - 3246819
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||| || ||||||||||| |||||||||||||    
T  3246901 agttctaaagttatttttaagttacaagttgtttggcaaaatattgtacaaaacattaaatttattatttttttggtggtgtc 3246819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 29874668 - 29874750
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    ||||||| |||||||||| ||||||||| ||| || ||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  29874668 agttctatagttatttttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttattatttttttggtggtgtc 29874750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 790061 - 790142
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||| ||| ||  |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  790061 agttctaaagttatttttaagttaaaagttgtttgaaaaaatattgtacaaaactatgaatttattatttttttggtggtgt 790142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 8314901 - 8314829
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||| |||||||| ||||||||| ||| | |||||||||| ||| |||||||||||||||||||||||    
T  8314901 agttctaaaattatttttaagttaaaagttgttttgcaaaatattatacaaaactttgaatttattatttttt 8314829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 31958390 - 31958465
Alignment:
Q  206 aaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  31958390 aaagttatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatttattacttttttggtggtgtc 31958465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 37147139 - 37147067
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||| |||||| || ||||||    
T  37147139 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttcgaattttttttttttt 37147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 42111809 - 42111877
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt 268  Q
    |||| |||||||||| || ||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  42111809 agttataaagttattgttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatt 42111877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 28990943 - 28991022
Alignment:
Q  205 taaagttatttttgagttaaaa-gctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||| ||||||| |||||||| | ||| |||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  28990943 taaagctattttttagttaaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttatgatggtgtctg 28991022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 7536717 - 7536645
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| | |||||||||||||| |||| |||||||| || ||||||    
T  7536717 agttctaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaacattgaattttttttttttt 7536645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 19270977 - 19270905
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||| ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||||||||||||||    
T  19270977 agttttaaagctatttttaagttaaaggttgtttggcaaaatattatacaaaactttgaatttattatttttt 19270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 29382576 - 29382659
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaa-ctttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||| |||| |||  ||| ||||||||| |||||||||||||||    
T  29382576 agttctaaagttatttttaagttaaaagttgtttggcaaaatatagtacaaaatttttaaatttattatttttttggtggtgtc 29382659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 30503532 - 30503613
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||  | | | |||||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  30503532 agttctaaagttatttttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttattatttttttggtggtgt 30503613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 30543875 - 30543956
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||  | | | |||||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  30543875 agttctaaagttatttttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttattatttttttggtggtgt 30543956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 1060768 - 1060706
Alignment:
Q  208 agttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttt 271  Q
    |||||||||| ||||||||  ||| || ||||||||||||| ||||||||||||||||||||||    
T  1060768 agttatttttaagttaaaaattgtttgacaaaatattgtac-aaactttgaatttattattttt 1060706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 16166292 - 16166354
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    ||||||||| |||||||| ||||||||| | | || ||||||||||||| |||||||||||||    
T  16166292 agttctaaaattatttttaagttaaaagttatttgacaaaatattgtacaaaactttgaattt 16166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 35380505 - 35380566
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatt 261  Q
    ||||||||||||| |||| ||||||||| ||| |||||||||||| ||| |||| |||||||    
T  35380505 agttctaaagttaattttaagttaaaagttgtttggcaaaatattatacaaaacattgaatt 35380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 14720252 - 14720185
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattat 267  Q
    |||| ||||| ||||||| || || ||| ||| ||| |||||||||||| ||||||||||||||||||    
T  14720252 agttttaaagctatttttaagatagaagttgtttgggaaaatattgtacaaaactttgaatttattat 14720185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 37461910 - 37461872
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37461910 tggcaaaatattgtac-aaactttgaatttattatttttt 37461872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 3213231 - 3213300
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttt 270  Q
    |||| ||||| ||||||  ||||||| | ||| || ||||||||||||| |||||||||||||||||||||    
T  3213231 agttttaaagctattttaaagttaaatgttgtttgacaaaatattgtac-aaactttgaatttattatttt 3213300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 15875756 - 15875806
Alignment:
Q  205 taaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactt 255  Q
    ||||||||||||| ||||||||| ||| | |||||||||||||| ||||||    
T  15875756 taaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactt 15875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 30503759 - 30503800
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaat 241  Q
    |||||||||||||||||| ||||||||| ||| |||||||||    
T  30503759 agttctaaagttatttttaagttaaaagttgtttggcaaaat 30503800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 30544102 - 30544143
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaat 241  Q
    |||||||||||||||||| ||||||||| ||| |||||||||    
T  30544102 agttctaaagttatttttaagttaaaagttgtttggcaaaat 30544143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 39783024 - 39782983
Alignment:
Q  206 aaagttatttttgagttaaaagctgtgtggcaaaatattgta 247  Q
    |||||||||||| ||||||||| ||| |||||||||||||||    
T  39783024 aaagttatttttcagttaaaagttgtttggcaaaatattgta 39782983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 14205485 - 14205441
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatatt 244  Q
    |||||||||||||||||| | ||||||| ||| ||||||||||||    
T  14205485 agttctaaagttatttttaatttaaaagttgtttggcaaaatatt 14205441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 18041185 - 18041256
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||| ||||||| ||||||| | ||| | |||||||||| ||| ||||||| |||||||||||||||    
T  18041185 agttttaaagctatttttaagttaaatgttgtttcgcaaaatattttac-aaactttaaatttattatttttt 18041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 1166712 - 1166629
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1166712 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 1166629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 1169194 - 1169111
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1169194 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 1169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 7400209 - 7400292
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7400209 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 7400292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 10137883 - 10137966
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10137883 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 10137966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 13890996 - 13891079
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13890996 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 13891079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 32206596 - 32206679
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32206596 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 32206679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 40951018 - 40950935
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40951018 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 40950935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 53274701 - 53274618
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53274701 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 53274618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 55188243 - 55188160
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55188243 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 55188160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 6940178 - 6940261
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  6940178 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggcgtctg 6940261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 7365869 - 7365786
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7365869 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 7365786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 27288474 - 27288557
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  27288474 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtctg 27288557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 34264632 - 34264715
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34264632 agttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 34264715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 55208488 - 55208571
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55208488 agttctacagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 55208571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 11200906 - 11200821
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctgtg 285  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  11200906 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtctgtg 11200821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 28116843 - 28116924
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  28116843 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtc 28116924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 11967004 - 11967087
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  11967004 agttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtagtgtctg 11967087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 26111451 - 26111368
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  26111451 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttgtggtgtctg 26111368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 55991892 - 55991809
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55991892 agttctaaaattatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 55991809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 17624733 - 17624651
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtct 282  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  17624733 agttctaaagttatttttaagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 17624651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 36190059 - 36190142
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  36190059 agttctaaagttatttttgagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattattttttgatggtgtctg 36190142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 8848011 - 8847929
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  8848011 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 8847929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 23628908 - 23628826
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattt-tttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  23628908 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttctttggtggtgtc 23628826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 18138408 - 18138327
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| | | ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  18138408 agttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttattattttttggtggtgtc 18138327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 29099625 - 29099708
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  29099625 agttgtaaagttatttttcagttaaaagttgtttggcaaaatattgtataaaactttaaatttattattttttggtggtgtctg 29099708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 24303803 - 24303884
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||| | | |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  24303803 agttctaaagttatttttaagttaaaagttatttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 24303884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 11180981 - 11180909
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||| ||||||||||||||||||    
T  11180981 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatttattatttttt 11180909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 41144305 - 41144377
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||    
T  41144305 agttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 41144377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 43117591 - 43117519
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||| ||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  43117591 agttctaaagttgtttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 43117519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 17976520 - 17976438
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    ||||||||| |||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  17976520 agttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttattatttttttggtggtgtc 17976438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 20681268 - 20681186
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||| ||||||||||||| ||||||||| ||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  20681268 agttttaaagttatttttaagttaaaagttgtttggtaaaatattgtacgaaacattgaatttattatttttttggtggtgtc 20681186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 49125618 - 49125536
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| | | ||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  49125618 agttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttattatttttttggtggtgtc 49125536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 40665593 - 40665513
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgt 280  Q
    |||||||||||||||||| ||||||| ||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  40665593 agttctaaagttatttttaagttaaa-gctgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 40665513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 22557037 - 22556965
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||| ||| |||||||||||||||||||||||    
T  22557037 agttctaaagttatttttaagttaaaagttgtttgacaaaatattttacaaaactttgaatttattatttttt 22556965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 26097651 - 26097723
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||||||||  ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  26097651 agttttaaagttattttgaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 26097723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 46045795 - 46045867
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||| || ||||||    
T  46045795 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 46045867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 32200716 - 32200799
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtct 282  Q
    |||| ||||||||||||| | ||||||| ||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  32200716 agttttaaagttatttttaaattaaaagttgtttggcagaatattgtacaaaactttgaatttattacttttttggtggtgtct 32200799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 37873646 - 37873728
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||||||||| | ||||||| ||| |||||||||||||||| |||  |||||||||||| |||||||||||||||    
T  37873646 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaaagttgaatttattatttttttggtggtgtc 37873728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 40849801 - 40849729
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||||||||| ||||||||  ||| || ||||||||||||| |||||||||||||||||||||||    
T  40849801 agttataaagttatttttaagttaaaaattgtttgtcaaaatattgtacaaaactttgaatttattatttttt 40849729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 8654318 - 8654386
Alignment:
Q  203 tctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||||| ||||||||  ||| ||||||| |||||||| |||||||||||||||||||||||    
T  8654318 tctaaagttatttttaagttaaaaattgtttggcaaa-tattgtacaaaactttgaatttattatttttt 8654386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 34663910 - 34663865
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattattttttggtggt 278  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  34663910 tggcaaaatattgtacaaaactttgaatttattattttttggtggt 34663865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 346607 - 346679
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||||| || ||||||||| | | ||||||| |||||||| |||| ||||||||||||||||||    
T  346607 agttctaaagttattgttaagttaaaagttctttggcaaactattgtacaaaacattgaatttattatttttt 346679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 51153555 - 51153499
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttga 258  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||    
T  51153555 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttga 51153499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 39651803 - 39651736
Alignment:
Q  205 taaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| ||||||||| ||| ||||||||| |||||| ||||||||||||| || ||||||    
T  39651803 taaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaactttgaattttttttttttt 39651736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 32139481 - 32139419
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||| |||| |||||||| ||||||||| ||| |||||||||||||||| |||||||||||||    
T  32139481 agttttaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 32139419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 51187690 - 51187608
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||| ||||||||||| ||||||||| ||| ||||| |||| ||||| ||| |||||||||| || |||||||||||||||    
T  51187690 agttctgaagttatttttaagttaaaagttgtttggcagaataatgtacaaaattttgaatttaatatttttttggtggtgtc 51187608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 24631113 - 24631181
Alignment:
Q  211 tatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    ||||||| ||||||||| ||| ||| |||||||||||  | |||||||||||||||||||||||||||||    
T  24631113 tatttttaagttaaaagttgtttggaaaaatattgtaa-atactttgaatttattattttttggtggtgt 24631181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 45472470 - 45472518
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  45472470 tggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 45472518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 28361503 - 28361565
Alignment:
Q  210 ttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||||||||| ||| || ||||||    
T  28361503 ttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgatttttttttttttt 28361565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 8151274 - 8151202
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttg 273  Q
    ||||||||| |||||||| ||||||||| ||| || |||||| |||||| ||||||||||||| || |||||||    
T  8151274 agttctaaaattatttttaagttaaaagttgtttgacaaaat-ttgtacaaaactttgaatttttttttttttg 8151202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 45019229 - 45019262
Alignment:
Q  250 aaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||||||||    
T  45019229 aaactttgaatttattattttttggtggtgtctg 45019262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 52620678 - 52620629
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  52620678 tggcaaaatattgtacaaaactctgaatttattatttttttggtggtgtc 52620629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 30071414 - 30071346
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt 268  Q
    |||| ||||||||||||| | || |||| ||| ||||||||||| |||| ||||||| |||||||||||    
T  30071414 agttataaagttatttttaactttaaagttgtttggcaaaatatcgtacaaaactttaaatttattatt 30071346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 40952093 - 40952045
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtac 248  Q
    |||||||||||||||||| ||||||||| ||| || |||||||||||||    
T  40952093 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtac 40952045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 10262031 - 10262069
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  10262031 tggcaaaatattgtac-aaactttgaatttattatttttt 10262069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 21562424 - 21562386
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  21562424 tggcaaaatattgtac-aaactttgaatttattatttttt 21562386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 24080102 - 24080140
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24080102 tggcaaaatattgtac-aaactttgaatttattatttttt 24080140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 43329945 - 43329907
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43329945 tggcaaaatattgtac-aaactttgaatttattatttttt 43329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 25881982 - 25881932
Alignment:
Q  210 ttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaat 260  Q
    |||||||| ||||||||| ||| | |||||||||||||| |||||||||||    
T  25881982 ttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaat 25881932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 26926975 - 26927010
Alignment:
Q  236 caaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26926975 caaaatattgtac-aaactttgaatttattatttttt 26927010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 30269084 - 30269167
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30269084 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 30269167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 45599267 - 45599350
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45599267 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 45599350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 54510387 - 54510470
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54510387 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 54510470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 29500407 - 29500325
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtct 282  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29500407 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 29500325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 4018991 - 4018908
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4018991 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtctg 4018908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 14587387 - 14587470
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14587387 agttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 14587470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 7040956 - 7040873
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7040956 agttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 7040873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 13450347 - 13450264
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  13450347 agttctaaaattatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtctg 13450264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33932486 - 33932569
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  33932486 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtataaaactttgaatttattattttttggtggtgtctg 33932569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 36592216 - 36592299
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36592216 agttctaaagttatttttgagttaaaaactgtttgtcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 36592299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 46757633 - 46757551
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  46757633 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgta-taaactttgaatttattattttttggtggtgtctg 46757551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 48545184 - 48545101
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  48545184 agttctaaagttatttttgagttaaaagctgtttgacaaaatatcgtacaaaactttgaatttattattttttggtggtgtctg 48545101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 52461102 - 52461019
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  52461102 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttataattttttcgtggtgtctg 52461019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 54741878 - 54741795
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  54741878 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttaaatttattattttttggtggtgtctg 54741795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 2909505 - 2909424
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2909505 ttctaaagttatttttgagttaaaagctgtttgacaaaatattatacaaaactttgaatttattattttttggtggtgtctg 2909424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 29450732 - 29450651
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29450732 ttctaaagttatttttgggttaaaagctgtttagcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 29450651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 20849404 - 20849484
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  20849404 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgt 20849484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 22347079 - 22347163
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaa-tattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22347079 agttctaaagttatttttgagttaaaagctgtttagcaaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 22347163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 26881696 - 26881613
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  26881696 agttctaaagttatttttgagttaaaaactgtttggcaaaatattttacaaaactttgaatttattatttttttgtggtgtctg 26881613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 52674853 - 52674775
Alignment:
Q  204 ctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52674853 ctaaagttatttttgagttaaaa-ctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 52674775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 43316516 - 43316598
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtct 282  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  43316516 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtct 43316598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 12101464 - 12101545
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12101464 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 12101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 53022741 - 53022669
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  53022741 agttctaaagttatttttgagttaaaagctgtttggcgaaatattgtacaaaactttgaatttattatttttt 53022669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 7265130 - 7265047
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||| || || |||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  7265130 agttctaaagttatttttgagttaaaagcagtttgacaaattattgtacaaaactttgaatttattatttttttgtggtgtctg 7265047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 19536782 - 19536699
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  19536782 agttctaaagttatttttgaattaaaagttgtttggcaaaatattgtataaaactttgaatttattattttttgctggtgtctg 19536699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 39721334 - 39721252
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  39721334 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 39721252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 38361825 - 38361743
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  38361825 agttctaaagttatttttaagttaaaagttgtttggcagaatattgtacaaaactttgaatttattatttttttggtggtgtc 38361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 35690212 - 35690293
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  35690212 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 35690293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 41990764 - 41990836
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||    
T  41990764 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtaccaaactttaaatttattatttttt 41990836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 46090118 - 46090190
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  46090118 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 46090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 50739229 - 50739157
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||    
T  50739229 agttctaaagttatttttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttattatttttt 50739157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 50773626 - 50773698
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||    
T  50773626 agttctaaagttatttttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttattatttttt 50773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 13337173 - 13337091
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||| | ||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  13337173 agttctaaagttatttttaagttaaa-gttgtttggcaaaatatcgtacaaaactttgaatttattatttttttgtggtgtctg 13337091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 44762725 - 44762795
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||    
T  44762725 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatatttt 44762795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 47719557 - 47719487
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||    
T  47719557 ttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 47719487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 37413644 - 37413560
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttt-ttggtggtgtctg 283  Q
    |||| ||||||||||||| ||||| ||| ||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  37413644 agttataaagttatttttaagttacaagttgtttggcaaaatattgtacaaaattttgaatttattattttcttggtggtgtctg 37413560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 42187749 - 42187833
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||| ||||||  ||||||||| |||||||||||||||||    
T  42187749 agttataaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttaaaatttattatttttttggtggtgtctg 42187833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 36987740 - 36987810
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||| || ||||||    
T  36987740 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 36987810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 37013179 - 37013249
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||| || ||||||    
T  37013179 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 37013249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 48961192 - 48961122
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| || ||||||||| ||| |||||||||||||||||||||||    
T  48961192 ttctaaagttatttttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttattatttttt 48961122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 54203746 - 54203828
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||||||||| | ||||||| ||| |||||||||||||||| |||| || ||||||||| |||||||||||||||    
T  54203746 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaacattaaatttattatttttttggtggtgtc 54203828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 12996818 - 12996893
Alignment:
Q  206 aaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||| ||||||||| ||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  12996818 aaagttatttttaagttaaaagttgtttggaaaaatattgtac-aaactttgaatttattacttttttggtggtgtc 12996893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 46850711 - 46850783
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||| ||||||| ||||||||| ||| |||||||||||||||| || ||||||||||||||||||||    
T  46850711 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtacaaacctttgaatttattatttttt 46850783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 54113487 - 54113415
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||||||||| ||||||||| ||| || ||||||||||||| ||||||| |||||||||||||||    
T  54113487 agttataaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttattatttttt 54113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 50933279 - 50933196
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||| ||||||||||||| ||||||||||||| |  ||||||||||||| ||| ||| ||||||||||||||| || |||||||    
T  50933279 agttataaagttatttttaagttaaaagctgtttaacaaaatattgtacaaaaatttaaatttattatttttttgttgtgtctg 50933196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 33899902 - 33899842
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaat 260  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||    
T  33899902 agttataaagttatttttaagttaaaagttgtttggcaaaatattttacgaaactttgaat 33899842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 15496470 - 15496541
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttt 271  Q
    |||||||||||||||||| || || ||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  15496470 agttctaaagttatttttaagctataagttgtttggcaaaatattgtacaaaactttgaatttttttttttt 15496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 35906684 - 35906766
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    ||||||||| |||||||| | ||||||| ||  || ||||||||||||| |||||||||||| |||| |||||||||||||||    
T  35906684 agttctaaaattatttttaaattaaaagttggttgacaaaatattgtacaaaactttgaattgattatttttttggtggtgtc 35906766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 875884 - 875825
Alignment:
Q  221 ttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||| |||||| |||||||||||||||| ||||||||||||   |||||||||||||||||||    
T  875884 ttaagagctgtttggcaaaatattgtacaaaactttgaatt---tattttttggtggtgtctg 875825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 20996334 - 20996406
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| | ||||||| ||| || ||||||||||||| ||| ||||||||| || ||||||    
T  20996334 agttctaaagttatttttaaattaaaagttgtttgtcaaaatattgtacaaaattttgaattttttttttttt 20996406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 46088720 - 46088782
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||||||||||||||||| ||| ||||| ||| ||| |||||||||||| ||||||| |||||    
T  46088720 agttctaaagttatttttaagtgaaaagttgtttggaaaaatattgtacaaaacttttaattt 46088782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 54195682 - 54195754
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||| || |||||||| ||||||||  | | || ||||||||||||| ||| |||||||||||||||||||    
T  54195682 agttctgaaattatttttaagttaaaaattatttgacaaaatattgtacaaaattttgaatttattatttttt 54195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 44075418 - 44075456
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  44075418 tggcaaaatattgtac-aaactttgaatttattatttttt 44075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 916315 - 916278
Alignment:
Q  234 ggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  916315 ggcaaaatattgtac-aaactttgaatttattatttttt 916278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 8238972 - 8238911
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||| ||||||||||||| ||||||| | ||| |||||||||||||||| ||||||| |||||    
T  8238972 agttttaaagttatttttaagttaaatgttgtttggcaaaatattgtac-aaactttaaattt 8238911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 22762296 - 22762357
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||| ||||| |||||||    
T  22762296 agttttaaagctatttttaagttaaatgttgtgtggcaaaatattgtac-aaactgtgaattt 22762357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 10617684 - 10617639
Alignment:
Q  211 tatttttgagttaaaagctgtgtggcaaaatattgtacgaaacttt 256  Q
    ||||||| ||||||||| ||| |||||||||||||||| |||||||    
T  10617684 tatttttaagttaaaagttgtttggcaaaatattgtacaaaacttt 10617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 54835790 - 54835729
Alignment:
Q  211 tatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||| ||||||||| ||| |||||||||||||||| ||| ||||| ||| || ||||||    
T  54835790 tatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgatttttttttttttt 54835729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 34433767 - 34433803
Alignment:
Q  236 caaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  34433767 caaaatattgtacaaaacttttaatttattatttttt 34433803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 971028 - 970945
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  971028 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 970945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 1835760 - 1835677
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1835760 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 1835677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 5166341 - 5166258
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5166341 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 5166258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 7233098 - 7233015
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7233098 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 7233015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 8878194 - 8878111
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8878194 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 8878111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 31972357 - 31972274
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31972357 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 31972274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 24926085 - 24926165
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  24926085 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 24926165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 18166833 - 18166916
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  18166833 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtatctg 18166916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 36085947 - 36086030
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  36085947 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattactttttggtggtgtctg 36086030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 8683734 - 8683652
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtct 282  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  8683734 agttctaaagttatttttgagttaaaagctgtttggcaaaaaattgtacaaaactttgaatttattattttttggtggtgtct 8683652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 7274745 - 7274664
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  7274745 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtc 7274664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 3324264 - 3324347
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  3324264 agttctaaagttatttttgagttaaaagctgtttcgcaaaatattatacaaaactttgaatttattattttttggtggtgtctg 3324347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4631281 - 4631203
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  4631281 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgt 4631203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 3243295 - 3243377
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  3243295 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 3243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 34912724 - 34912654
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  34912724 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 34912654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 38879211 - 38879129
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  38879211 agttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaaaactttgaatttattatttttttggtggtgtc 38879129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 668294 - 668375
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||||||||||||| | ||||||| ||| ||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  668294 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgcacaaaattttgaatttattattttttggtggtgtc 668375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 36078556 - 36078637
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  36078556 agttctaaagttatttttaagttaaaaggtgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 36078637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 3079792 - 3079720
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||| |||||||| ||||||||| ||| ||||||||||||| || |||||||||||||||||||||||    
T  3079792 agttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttattatttttt 3079720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 10120684 - 10120612
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||||||| ||||||| |||||||||||||||    
T  10120684 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttattatttttt 10120612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 40202290 - 40202218
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| |||  ||||||||||||||| ||||||| |||||||||||||||    
T  40202290 agttctaaagttatttttaagttaaaagttgttaggcaaaatattgtacaaaactttaaatttattatttttt 40202218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 17032813 - 17032896
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||| |||||| |||||| || |||||| ||||||||||    
T  17032813 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttggaattttttttttttttgtggtgtctg 17032896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 35423861 - 35423789
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||| ||||||||||| ||||||||| ||| ||||||||| |||||| ||||||| |||||||||||||||    
T  35423861 agttcttaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaactttaaatttattatttttt 35423789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 41452890 - 41452818
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||| ||||| || ||||||    
T  41452890 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttaaattttttttttttt 41452818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 45474797 - 45474725
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    ||||||||| |||||||| ||||||||| ||| |||||||||||||||| ||||||||||||| || ||||||    
T  45474797 agttctaaatttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 45474725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 1118055 - 1117981
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtac--gaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| || |||||||||||||  | ||||||||||||||||||||||    
T  1118055 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacatgtaactttgaatttattatttttt 1117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 9799330 - 9799405
Alignment:
Q  205 taaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    ||||||| ||||| ||||||||| ||| || ||||||||||||  ||||||||||||||||||||||| |||||||    
T  9799330 taaagttgtttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttattattttttagtggtgt 9799405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 20313248 - 20313294
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgt 246  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  20313248 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgt 20313294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 2180093 - 2180011
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttga-atttattattttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| | |||||||||| ||| |||||||||  ||| || |||||||||||||||    
T  2180093 agttctaaagttatttttaagttaaaagttgttttgcaaaatattatacaaaactttgatttttttttttttttggtggtgtc 2180011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 38709765 - 38709708
Alignment:
Q  205 taaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    ||||||||||||| ||||||||| ||| || ||||||||||||| |||||||||||||    
T  38709765 taaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaattt 38709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 17051171 - 17051221
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||| |||| | |||||||||||||||| ||||||||||    
T  17051171 tggcaaaatattgtacaaaacatagaatttattatttttttgtggtgtctg 17051221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 3708492 - 3708454
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  3708492 tggcaaaatattgtac-aaactttgaatttattatttttt 3708454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 11868924 - 11868962
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  11868924 tggcaaaatattgtac-aaactttgaatttattatttttt 11868962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 35360317 - 35360355
Alignment:
Q  233 tggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  35360317 tggcaaaatattgtac-aaactttgaatttattatttttt 35360355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 38959644 - 38959687
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatat 243  Q
    ||||||||| |||||||||||||||||||||| || ||||||||    
T  38959644 agttctaaaattatttttgagttaaaagctgtttgacaaaatat 38959687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 1692624 - 1692685
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||| ||||| |||||||    
T  1692624 agttttaaagctatttttaagttaaatgttgtgtggcaaaatattgtac-aaactgtgaattt 1692685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 11583231 - 11583148
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11583231 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 11583148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 17585590 - 17585507
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17585590 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 17585507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 25659810 - 25659893
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25659810 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 25659893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33373820 - 33373903
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33373820 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 33373903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 33642685 - 33642602
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33642685 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 33642602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33895217 - 33895300
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33895217 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 33895300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 39327043 - 39327126
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39327043 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 39327126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 45104255 - 45104172
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45104255 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 45104172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 43120780 - 43120862
Alignment:
Q  201 gttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43120780 gttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 43120862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 3265191 - 3265108
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  3265191 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtataaaactttgaatttattattttttggtggtgtctg 3265108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 7833620 - 7833537
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7833620 agttctaaagttatttttgagttaaaaactgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 7833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 9574936 - 9574853
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9574936 agttctaaagttatttttgagttaaaagctgttcggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 9574853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33818094 - 33818177
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33818094 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 33818177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33831925 - 33832008
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  33831925 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttattattttttggtggtgtctg 33832008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33877562 - 33877645
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33877562 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 33877645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33894087 - 33894170
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  33894087 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttattattttttggtggtgtctg 33894170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 36165521 - 36165604
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36165521 agttctaaagttatttttgagttaaaagctttttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 36165604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 41901700 - 41901783
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  41901700 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtagtgtctg 41901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 47037131 - 47037214
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  47037131 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggcgtctg 47037214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 40432208 - 40432286
Alignment:
Q  205 taaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40432208 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtctg 40432286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 11754228 - 11754308
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  11754228 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 11754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 38802380 - 38802300
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  38802380 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgt 38802300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 14487324 - 14487407
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14487324 agttctaaagttatttttgagttaaaagctgtttggaaaaatattgtacaaaactttgaatttattattttttggtggtatctg 14487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 46588091 - 46588174
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  46588091 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatataaaactttgaatttattattttttggtggtgtctg 46588174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 17249110 - 17249026
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatt-ttttggtggtgtctg 283  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  17249110 agttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaaaactttgattttattatttttttggtggtgtctg 17249026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 24473551 - 24473623
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  24473551 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 24473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 43119114 - 43119186
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  43119114 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 43119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 36952714 - 36952797
Alignment:
Q  201 gttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  36952714 gttctaaatttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtctg 36952797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 39879140 - 39879224
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||| |||| |||||||||||| |||||||||||||||||    
T  39879140 agttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaaaacattgaatttattatttttttggtggtgtctg 39879224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 43123113 - 43123042
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  43123113 agttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaattt-ttatttttt 43123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 46040486 - 46040568
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  46040486 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgaatttattatttttttggtggtgtc 46040568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 1322525 - 1322609
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtctg 283  Q
    |||||||||||||||||| | ||||||| ||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  1322525 agttctaaagttatttttaaattaaaagttgtttggtaaaatattgtacaaaacattgaatttattatttttttggtggtgtctg 1322609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 18091348 - 18091268
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||| ||||| ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||  |||||||    
T  18091348 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaatttattatttttttatggtgtc 18091268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 16097417 - 16097336
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||||||| |  || |||||| ||||||||||    
T  16097417 agttctaaaattatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaagt--ttttttttttgtggtgtctg 16097336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 31638425 - 31638496
Alignment:
Q  210 ttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtc 281  Q
    |||||||| ||||||||| ||| |||||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  31638425 ttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaattaattatttttttgtggtgtc 31638496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 34078355 - 34078285
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| | ||||||| ||| |||||||||||||||| ||||||||||||| || ||||||    
T  34078355 ttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 34078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 23730301 - 23730376
Alignment:
Q  206 aaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatt-attttttggtggtgtc 281  Q
    |||||||||||| ||||||||| ||| |||||||||||||||| |||||||||| |||||  |||||||||||||||    
T  23730301 aaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaaattattgcttttttggtggtgtc 23730376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 34652341 - 34652277
Alignment:
Q  208 agttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||| ||||||||| ||| || ||||||||||||| ||| |||||||||||||||||||    
T  34652341 agttatttttaagttaaaagttgtttgacaaaatattgtacaaaattttgaatttattatttttt 34652277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 17366355 - 17366411
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttga 258  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||||||| |||||||||    
T  17366355 ttctaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaactttga 17366411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 31215864 - 31215907
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatat 243  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  31215864 agttctaaagttatttttgagttaaaagttgtttggcaaaatat 31215907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 31221619 - 31221662
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatat 243  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  31221619 agttctaaagttatttttgagttaaaagttgtttggcaaaatat 31221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 7308331 - 7308404
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaa-ctttgaatttattatttttt 272  Q
    |||||||| ||||||||| ||||||||| ||| |||||||||||||||| |||  ||||||||| || ||||||    
T  7308331 agttctaatgttatttttaagttaaaagttgtttggcaaaatattgtacaaaatttttgaattttttttttttt 7308404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 39729206 - 39729262
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttga 258  Q
    |||||||||||||||| ||||||||| ||| |  ||||||||||||| |||||||||    
T  39729206 ttctaaagttatttttaagttaaaagttgtttcacaaaatattgtacaaaactttga 39729262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 11606467 - 11606534
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattat 267  Q
    |||| ||||| ||||| | | ||||||| ||| |||||||||||||||| ||||||| ||||||||||    
T  11606467 agttttaaagctatttctaaattaaaagttgtttggcaaaatattgtacaaaactttaaatttattat 11606534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 23910914 - 23910975
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaattt 262  Q
    |||| ||||| ||||||| ||||||| | |||||||||||||||||||| ||||| |||||||    
T  23910914 agttttaaagctatttttaagttaaatgttgtgtggcaaaatattgtac-aaactgtgaattt 23910975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 33932988 - 33932911
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||| | ||||||| ||| |||||||||||  ||| ||||||| ||||| || |||||| |||||||    
T  33932988 ttctaaagttatttttaaattaaaagttgtttggcaaaatatcatacaaaacttt-aattttttttttttttgtggtgt 33932911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 43124424 - 43124356
Alignment:
Q  204 ctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||| ||||||||| ||||||||  ||| |||||||||||| ||  ||| ||||||||| |||||||||    
T  43124424 ctaaggttatttttaagttaaaatttgtttggcaaaatattatataaaaatttgaattttttatttttt 43124356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 1548 - 1465
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgtctg 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  1548 agttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtctg 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 4512 - 4592
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4512 agttctaaagttatttttgagttaaaagctgtttggccaaatattgtacaaaactttgaatttattattttttggtggtgt 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 7522 - 7442
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttggtggtgt 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  7522 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttagaatttattattttttggtggtgt 7442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 7292 - 7364
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  7292 agttctaaagttatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttattatttttt 7364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 90463 - 90542
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgt 280  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  90463 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 90542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 110529 - 110600
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattattttttg 273  Q
    |||||||||||||||| ||||||||| ||| | ||||||||||||| |||||||||| ||| || |||||||    
T  110529 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgtaagaaactttgattttttttttttttg 110600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 15261 - 15333
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  15261 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 7574 - 7656
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttatta-ttttttggtggtgtc 281  Q
    |||||||||||||||||| ||||||||| ||| || ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7574 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 7656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 6306 - 6375
Alignment:
Q  203 tctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||| |||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  6306 tctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 6375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 132730 - 132647
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattat-tttttggtggtgtctg 283  Q
    |||||||||||||||||| | ||||||| ||| |||||||||||||||  ||||||| |||||||||| |||||||| |||||||    
T  132730 agttctaaagttatttttaatttaaaagttgtttggcaaaatattgta-taaactttcaatttattatctttttggttgtgtctg 132647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 138031 - 138101
Alignment:
Q  202 ttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactttgaatttattatttttt 272  Q
    |||||||||||||||| ||||||||| ||| | ||||||||||| || | ||||||||||| || ||||||    
T  138031 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgcacaagactttgaattttttttttttt 138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 229156 - 229101
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatattgtacgaaactt 255  Q
    |||| ||||||||||||| ||||||||| ||| ||| |||||||||||| ||||||    
T  229156 agttttaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaactt 229101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 1127 - 1083
Alignment:
Q  200 agttctaaagttatttttgagttaaaagctgtgtggcaaaatatt 244  Q
    |||| ||||||||||||| ||||||||| ||| ||||||||||||    
T  1127 agttttaaagttatttttaagttaaaagttgtttggcaaaatatt 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University