View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18900_high_6 (Length: 255)

Name: NF18900_high_6
Description: NF18900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18900_high_6
NF18900_high_6
[»] chr2 (32 HSPs)
chr2 (20-173)||(16382739-16382894)
chr2 (220-254)||(42714439-42714473)
chr2 (214-255)||(4238753-4238794)
chr2 (214-255)||(9383235-9383276)
chr2 (214-255)||(44526122-44526163)
chr2 (214-254)||(6765604-6765644)
chr2 (214-254)||(23359130-23359170)
chr2 (220-255)||(2429016-2429051)
chr2 (212-255)||(14414921-14414964)
chr2 (220-255)||(15770790-15770825)
chr2 (208-255)||(28644513-28644560)
chr2 (213-255)||(833095-833137)
chr2 (217-255)||(20120747-20120785)
chr2 (213-255)||(29734684-29734726)
chr2 (214-255)||(2256965-2257006)
chr2 (214-255)||(4122039-4122080)
chr2 (214-255)||(8091184-8091225)
chr2 (214-255)||(16877118-16877159)
chr2 (214-255)||(16989249-16989290)
chr2 (214-255)||(20455885-20455926)
chr2 (214-255)||(22523038-22523079)
chr2 (213-254)||(29798544-29798585)
chr2 (214-255)||(33063980-33064021)
chr2 (214-255)||(34977198-34977239)
chr2 (214-255)||(35820327-35820368)
chr2 (214-255)||(36264505-36264546)
chr2 (213-254)||(40365433-40365474)
chr2 (223-255)||(7350549-7350581)
chr2 (214-254)||(9842229-9842269)
chr2 (214-254)||(17736787-17736827)
chr2 (214-254)||(32063615-32063655)
chr2 (214-254)||(41187484-41187524)
[»] scaffold0011 (4 HSPs)
scaffold0011 (56-213)||(15757-15912)
scaffold0011 (214-254)||(185257-185297)
scaffold0011 (214-254)||(7716-7756)
scaffold0011 (214-254)||(223152-223192)
[»] chr3 (38 HSPs)
chr3 (57-173)||(17581688-17581804)
chr3 (214-255)||(53996293-53996334)
chr3 (214-254)||(19126704-19126744)
chr3 (213-255)||(38130985-38131027)
chr3 (57-166)||(271874-271983)
chr3 (214-255)||(10498721-10498762)
chr3 (215-255)||(8139710-8139750)
chr3 (214-254)||(21506785-21506825)
chr3 (214-254)||(39481135-39481175)
chr3 (214-254)||(44579630-44579670)
chr3 (220-255)||(529180-529215)
chr3 (220-255)||(7938724-7938759)
chr3 (215-254)||(25340951-25340990)
chr3 (220-255)||(47313398-47313433)
chr3 (220-255)||(50037311-50037346)
chr3 (220-254)||(14827525-14827559)
chr3 (221-255)||(29631187-29631221)
chr3 (220-254)||(32629080-32629114)
chr3 (220-254)||(32836173-32836207)
chr3 (214-255)||(1149095-1149136)
chr3 (214-255)||(2496549-2496590)
chr3 (214-255)||(3612208-3612249)
chr3 (214-255)||(7557560-7557601)
chr3 (218-255)||(9321431-9321468)
chr3 (218-255)||(12131699-12131736)
chr3 (214-255)||(16980380-16980421)
chr3 (214-255)||(18870751-18870792)
chr3 (218-255)||(19468449-19468486)
chr3 (214-255)||(21331443-21331484)
chr3 (214-255)||(21513282-21513323)
chr3 (222-255)||(24428499-24428532)
chr3 (218-255)||(25441526-25441563)
chr3 (214-255)||(45431942-45431983)
chr3 (223-255)||(977967-977999)
chr3 (214-254)||(3100215-3100255)
chr3 (215-255)||(5030200-5030240)
chr3 (214-254)||(32843289-32843329)
chr3 (211-255)||(53429146-53429190)
[»] chr1 (41 HSPs)
chr1 (201-255)||(25532954-25533008)
chr1 (213-254)||(48100715-48100756)
chr1 (214-254)||(25086477-25086517)
chr1 (218-255)||(8253737-8253774)
chr1 (214-255)||(24752674-24752715)
chr1 (210-255)||(27533233-27533278)
chr1 (214-255)||(32944730-32944771)
chr1 (214-255)||(35308179-35308220)
chr1 (214-255)||(42045398-42045439)
chr1 (214-254)||(40227823-40227863)
chr1 (215-254)||(2613717-2613756)
chr1 (220-255)||(23309464-23309499)
chr1 (220-255)||(28053267-28053302)
chr1 (220-255)||(30003201-30003236)
chr1 (220-255)||(45140032-45140067)
chr1 (220-255)||(45190295-45190330)
chr1 (220-254)||(14520944-14520978)
chr1 (220-254)||(15892797-15892831)
chr1 (220-254)||(42888575-42888609)
chr1 (221-254)||(925454-925487)
chr1 (214-255)||(1794590-1794631)
chr1 (214-255)||(13054867-13054908)
chr1 (214-255)||(15602203-15602244)
chr1 (213-254)||(16826347-16826388)
chr1 (214-255)||(17139543-17139584)
chr1 (221-254)||(17188695-17188728)
chr1 (214-255)||(21400049-21400090)
chr1 (214-255)||(26803477-26803518)
chr1 (214-255)||(29935977-29936018)
chr1 (214-255)||(33153906-33153947)
chr1 (218-255)||(34521216-34521253)
chr1 (214-255)||(36467051-36467092)
chr1 (214-255)||(48681959-48682000)
chr1 (214-255)||(52441537-52441578)
chr1 (214-254)||(6567704-6567744)
chr1 (214-254)||(13590104-13590144)
chr1 (214-250)||(17280115-17280151)
chr1 (214-254)||(24162789-24162829)
chr1 (214-254)||(39452454-39452494)
chr1 (219-255)||(41926821-41926857)
chr1 (220-252)||(44340883-44340915)
[»] chr6 (22 HSPs)
chr6 (214-255)||(12700447-12700488)
chr6 (214-255)||(655775-655816)
chr6 (214-255)||(9111041-9111082)
chr6 (214-255)||(32053782-32053823)
chr6 (214-254)||(4494898-4494938)
chr6 (215-255)||(20744133-20744173)
chr6 (220-254)||(26320590-26320624)
chr6 (218-255)||(361752-361789)
chr6 (214-255)||(7927694-7927735)
chr6 (222-255)||(8637463-8637496)
chr6 (214-255)||(9677229-9677270)
chr6 (214-255)||(13376306-13376347)
chr6 (214-255)||(28318021-28318062)
chr6 (214-255)||(29740476-29740517)
chr6 (214-255)||(34828300-34828341)
chr6 (212-252)||(3923178-3923218)
chr6 (214-254)||(12333595-12333635)
chr6 (223-255)||(13044640-13044672)
chr6 (214-254)||(14296984-14297024)
chr6 (215-255)||(17382079-17382119)
chr6 (219-255)||(18254127-18254163)
chr6 (219-255)||(26522471-26522507)
[»] chr5 (42 HSPs)
chr5 (214-254)||(10704358-10704398)
chr5 (215-255)||(14188361-14188401)
chr5 (220-255)||(4573085-4573120)
chr5 (212-255)||(16089442-16089485)
chr5 (213-255)||(16188817-16188859)
chr5 (213-255)||(16188919-16188961)
chr5 (214-255)||(10199013-10199054)
chr5 (221-254)||(12265915-12265948)
chr5 (214-255)||(17239407-17239448)
chr5 (214-255)||(37932324-37932365)
chr5 (214-254)||(18331701-18331741)
chr5 (214-254)||(28207126-28207166)
chr5 (208-255)||(5485174-5485221)
chr5 (220-255)||(26409253-26409288)
chr5 (220-255)||(32283579-32283614)
chr5 (220-255)||(42515807-42515842)
chr5 (213-255)||(15889404-15889446)
chr5 (221-255)||(16752528-16752562)
chr5 (213-255)||(36321520-36321562)
chr5 (221-254)||(1488365-1488398)
chr5 (214-255)||(3445273-3445314)
chr5 (214-255)||(6489001-6489042)
chr5 (214-255)||(6624770-6624811)
chr5 (214-255)||(8839449-8839490)
chr5 (214-255)||(10531534-10531575)
chr5 (214-255)||(11720888-11720929)
chr5 (214-255)||(18489102-18489143)
chr5 (214-255)||(19248473-19248514)
chr5 (218-255)||(20927637-20927674)
chr5 (214-255)||(22522827-22522868)
chr5 (214-255)||(24485693-24485734)
chr5 (214-255)||(31561370-31561411)
chr5 (214-255)||(34436845-34436886)
chr5 (214-255)||(40056616-40056657)
chr5 (214-255)||(42505866-42505907)
chr5 (214-254)||(11637599-11637639)
chr5 (219-255)||(16531301-16531337)
chr5 (215-255)||(20175720-20175760)
chr5 (218-254)||(26223352-26223388)
chr5 (214-254)||(32858664-32858704)
chr5 (214-254)||(33133633-33133673)
chr5 (214-254)||(37438554-37438594)
[»] chr4 (47 HSPs)
chr4 (215-255)||(19854560-19854600)
chr4 (218-254)||(29681484-29681520)
chr4 (214-255)||(2186359-2186400)
chr4 (218-255)||(24479338-24479375)
chr4 (214-255)||(28435274-28435315)
chr4 (214-255)||(30051893-30051934)
chr4 (214-255)||(52270056-52270097)
chr4 (214-254)||(1232807-1232847)
chr4 (214-254)||(9946421-9946461)
chr4 (219-255)||(20383487-20383523)
chr4 (214-253)||(10401424-10401463)
chr4 (220-255)||(13964086-13964121)
chr4 (215-254)||(31780740-31780779)
chr4 (220-255)||(44221447-44221482)
chr4 (220-255)||(51465337-51465372)
chr4 (221-255)||(8415521-8415555)
chr4 (212-254)||(9913891-9913933)
chr4 (221-255)||(11949789-11949823)
chr4 (208-254)||(32180818-32180864)
chr4 (218-255)||(2580731-2580768)
chr4 (214-255)||(3936621-3936662)
chr4 (214-255)||(6087741-6087782)
chr4 (214-255)||(7230274-7230315)
chr4 (209-254)||(9539220-9539265)
chr4 (214-255)||(10519129-10519170)
chr4 (214-255)||(12322667-12322708)
chr4 (213-254)||(15849227-15849268)
chr4 (214-255)||(16743310-16743351)
chr4 (213-254)||(19588147-19588188)
chr4 (214-255)||(20799420-20799461)
chr4 (214-255)||(23809943-23809984)
chr4 (214-255)||(24665017-24665058)
chr4 (214-255)||(26033269-26033310)
chr4 (214-255)||(34247434-34247475)
chr4 (213-254)||(35287534-35287575)
chr4 (214-255)||(35997993-35998034)
chr4 (214-255)||(36071138-36071179)
chr4 (214-255)||(38453259-38453300)
chr4 (210-255)||(40160788-40160833)
chr4 (214-255)||(43034368-43034409)
chr4 (213-254)||(43374299-43374340)
chr4 (214-255)||(50362165-50362206)
chr4 (223-255)||(10204843-10204875)
chr4 (214-254)||(10303538-10303578)
chr4 (214-254)||(11198758-11198798)
chr4 (214-254)||(39171397-39171437)
chr4 (218-254)||(51458676-51458712)
[»] chr8 (30 HSPs)
chr8 (220-255)||(2958425-2958460)
chr8 (213-255)||(19163562-19163604)
chr8 (214-255)||(7996934-7996975)
chr8 (214-255)||(12910832-12910873)
chr8 (218-255)||(30427729-30427766)
chr8 (211-254)||(8137926-8137969)
chr8 (220-255)||(10601763-10601798)
chr8 (220-255)||(10871920-10871955)
chr8 (209-255)||(13286120-13286166)
chr8 (213-255)||(18942911-18942953)
chr8 (214-255)||(56830-56871)
chr8 (214-255)||(574378-574419)
chr8 (214-255)||(6235577-6235618)
chr8 (214-255)||(8910007-8910048)
chr8 (214-255)||(11708980-11709021)
chr8 (214-255)||(13357467-13357508)
chr8 (214-255)||(15225799-15225840)
chr8 (214-255)||(23852905-23852946)
chr8 (214-255)||(27718920-27718961)
chr8 (214-255)||(30623287-30623328)
chr8 (214-255)||(32051558-32051599)
chr8 (214-255)||(33451375-33451416)
chr8 (214-255)||(39821878-39821919)
chr8 (214-255)||(44293569-44293610)
chr8 (214-254)||(2554239-2554279)
chr8 (215-255)||(8717501-8717541)
chr8 (215-255)||(17704008-17704048)
chr8 (214-254)||(24023839-24023879)
chr8 (214-254)||(29499765-29499805)
chr8 (227-255)||(33555437-33555465)
[»] chr7 (38 HSPs)
chr7 (214-255)||(5526719-5526760)
chr7 (214-255)||(10244721-10244762)
chr7 (214-255)||(20243249-20243290)
chr7 (214-255)||(39801700-39801741)
chr7 (218-255)||(42043092-42043129)
chr7 (214-255)||(48980481-48980522)
chr7 (214-254)||(19416508-19416548)
chr7 (214-254)||(30397063-30397103)
chr7 (214-254)||(38728202-38728242)
chr7 (214-253)||(31038550-31038589)
chr7 (217-255)||(22991417-22991455)
chr7 (215-253)||(30793074-30793112)
chr7 (221-255)||(38841988-38842022)
chr7 (217-255)||(43346590-43346628)
chr7 (214-255)||(5579687-5579728)
chr7 (214-255)||(8237658-8237699)
chr7 (218-255)||(8615021-8615058)
chr7 (214-255)||(8683064-8683105)
chr7 (214-255)||(8883547-8883588)
chr7 (214-255)||(20455130-20455171)
chr7 (214-255)||(24991775-24991816)
chr7 (214-255)||(27462462-27462503)
chr7 (214-255)||(34369473-34369514)
chr7 (214-255)||(35142175-35142216)
chr7 (214-255)||(45051691-45051732)
chr7 (214-254)||(580953-580993)
chr7 (215-255)||(3953436-3953476)
chr7 (214-254)||(4227555-4227595)
chr7 (214-254)||(7705067-7705107)
chr7 (226-254)||(7908599-7908627)
chr7 (219-255)||(21105602-21105638)
chr7 (214-254)||(21993176-21993216)
chr7 (215-255)||(25888895-25888935)
chr7 (214-254)||(37516829-37516869)
chr7 (215-255)||(41527555-41527595)
chr7 (214-254)||(46207754-46207794)
chr7 (214-254)||(47342671-47342711)
chr7 (214-254)||(47589580-47589620)
[»] scaffold0458 (1 HSPs)
scaffold0458 (214-254)||(11179-11219)
[»] scaffold0021 (1 HSPs)
scaffold0021 (214-254)||(161135-161175)
[»] scaffold0118 (1 HSPs)
scaffold0118 (220-255)||(39998-40033)
[»] scaffold0735 (1 HSPs)
scaffold0735 (220-254)||(1528-1562)
[»] scaffold0031 (1 HSPs)
scaffold0031 (220-254)||(47268-47302)
[»] scaffold0003 (1 HSPs)
scaffold0003 (220-254)||(361275-361309)
[»] scaffold0567 (1 HSPs)
scaffold0567 (214-255)||(7565-7606)
[»] scaffold0334 (1 HSPs)
scaffold0334 (214-255)||(5176-5217)
[»] scaffold0040 (2 HSPs)
scaffold0040 (214-255)||(56778-56819)
scaffold0040 (214-255)||(58847-58888)
[»] scaffold0038 (1 HSPs)
scaffold0038 (214-255)||(109127-109168)
[»] scaffold0025 (1 HSPs)
scaffold0025 (214-255)||(64212-64253)
[»] scaffold0006 (1 HSPs)
scaffold0006 (214-255)||(208936-208977)
[»] scaffold0743 (1 HSPs)
scaffold0743 (215-255)||(1445-1485)
[»] scaffold0188 (1 HSPs)
scaffold0188 (214-254)||(28140-28180)
[»] scaffold0122 (1 HSPs)
scaffold0122 (215-255)||(31181-31221)
[»] scaffold0036 (1 HSPs)
scaffold0036 (214-254)||(18888-18928)


Alignment Details
Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 16382739 - 16382894
Alignment:
Q  20 gacatttgttagaattctc--aattgtaatgatgttatttgtacctttttggtttggacttccaaagagtaatgcacttctacttatataatttccactg 117  Q
    |||||||||||||||||    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  16382739 gacatttgttagaattcatgaaattgtaatgatgctatttgtacctttttggttgggacttccaaagagtaatgcacttctgcttaaataatttccactg 16382838  T
Q  118 ccactaagacctggacctcttaatccatccattcctttccacatcgtctaatagaa 173  Q
    ||| | ||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  16382839 ccagtgagacctggacctcttaacccatccattcctttccacattgtctaaaagaa 16382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 42714439 - 42714473
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||||||||||||||||||||||    
T  42714439 gtgagcttagttcagttggtatggacaatgcataa 42714473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 4238753 - 4238794
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  4238753 gtccttgtgagcttagctcagttagtatggacaatgcataat 4238794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 9383276 - 9383235
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  9383276 gtcctcgtgagcttagctcagttggtatggacaatgcataat 9383235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 44526122 - 44526163
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  44526122 gtcctcgtgagcttagctcagttggtatggacaatgcataat 44526163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 6765604 - 6765644
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  6765604 gtccttgtaagcttagctcagttggtatggacaatgcataa 6765644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 23359170 - 23359130
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  23359170 gtcctcgtgagcttagttcagttggtatagacaatgcataa 23359130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 2429016 - 2429051
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||||||| ||||||||||||||    
T  2429016 gtgagcttagttcagttggtaaggacaatgcataat 2429051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 14414964 - 14414921
Alignment:
Q  212 acgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| |||||||||  |||||||||||||||||||||||||    
T  14414964 acgtcctcgtgagcttaactcagttggtatggacaatgcataat 14414921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 15770790 - 15770825
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||| |||||||||||||||||||||    
T  15770790 gtgagcttagttcaattggtatggacaatgcataat 15770825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 28644513 - 28644560
Alignment:
Q  208 aaagacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||||||||  |||||||||| ||||||||||||||    
T  28644513 aaagatgtccttgtgagcttaactcagttggtagggacaatgcataat 28644560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 833137 - 833095
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| || || |||||||||||||||||||||||||    
T  833137 cgtccttgtgaactcagctcagttggtatggacaatgcataat 833095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 20120785 - 20120747
Alignment:
Q  217 cttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  20120785 cttgtgagcttagctcagttggtaaggacaatgcataat 20120747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 29734684 - 29734726
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||| ||||||| |||||||||||||||||    
T  29734684 cgtccttgtgagtttagctcagttgatatggacaatgcataat 29734726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 2256965 - 2257006
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataat 2257006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 4122080 - 4122039
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||| ||||||||||||||||||||    
T  4122080 gtcctcgtgagcttagctcagctggtatggacaatgcataat 4122039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 8091225 - 8091184
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||  ||||| |||||||||||||||||||    
T  8091225 gtccttgtgagcttatctcagtaggtatggacaatgcataat 8091184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 16877118 - 16877159
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||| ||||||||||||||||||||    
T  16877118 gtcctcgtgagcttagctcagctggtatggacaatgcataat 16877159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 16989249 - 16989290
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||| ||||||||||||||||||||    
T  16989249 gtcctcgtgagcttagctcagctggtatggacaatgcataat 16989290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 20455885 - 20455926
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||| |||||||||||||||||||||    
T  20455885 gtcctcgtgagcttagctcaattggtatggacaatgcataat 20455926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22523079 - 22523038
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||| ||||||    
T  22523079 gtcctcgtgagcttagctcagttggtatggacaatacataat 22523038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 29798585 - 29798544
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||  ||||||||||||||||||||||||    
T  29798585 cgtcctcgtgagcttaactcagttggtatggacaatgcataa 29798544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 33063980 - 33064021
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  33063980 gtcctcgtgagcttagctcagttgatatggacaatgcataat 33064021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 34977198 - 34977239
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  34977198 gtcctcgtgagcttaactcagttggtatggacaatgcataat 34977239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35820368 - 35820327
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  35820368 gtcctcgtgagcttagctcagttggtagggacaatgcataat 35820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 36264546 - 36264505
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||| |||| |||||||||| ||||||||||    
T  36264546 gtccttgtgagcttaattcaattggtatggataatgcataat 36264505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 40365474 - 40365433
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||| |||||||||||| |||||||||||    
T  40365474 cgtcctcgtgagcttagctcagttggtatgtacaatgcataa 40365433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 7350549 - 7350581
Alignment:
Q  223 agcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| |||||||||||||||||||||||||    
T  7350549 agcttagctcagttggtatggacaatgcataat 7350581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 9842269 - 9842229
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||| |||||||||||||    
T  9842269 gtcctcgtgagcttagctcagttggtagggacaatgcataa 9842229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 17736787 - 17736827
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  17736787 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 17736827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 32063655 - 32063615
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  32063655 gtcctcgtgagcttagctcagttggtatggataatgcataa 32063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 41187524 - 41187484
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  41187524 gtcctcgtgagcttagcttagttggtatggacaatgcataa 41187484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 99; Significance: 6e-49; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 15912 - 15757
Alignment:
Q  56 ttgtacctttttggtttggacttccaaagagtaatgcacttctacttatataatttccactgccactaagacctggacctcttaatccatccattccttt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  15912 ttgtacctttttggtttggacttccaaagagtaatgcacttctacttatataatttccactgccagttagacctggacctcttaatccatccattccttt 15813  T
Q  156 ccacatcgtctaatagaagttaaattacaatatgttagttcataaataaaccaaagac 213  Q
    |||| | ||||||| |||  || | || |  ||||||||||||||| ||| |||||||    
T  15812 ccactttgtctaatggaaaatacaatata--atgttagttcataaacaaaacaaagac 15757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 185257 - 185297
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  185257 gtcctcgtgagcttagctcagttggtatggacaatgcataa 185297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 7716 - 7756
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||| |||||||  ||||||||||||||||||||||||    
T  7716 gtccttgcgagcttaactcagttggtatggacaatgcataa 7756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 223152 - 223192
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||||||||| |||||    
T  223152 gtcctcgtgagcttagctcagttggtatggacaatacataa 223192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 17581688 - 17581804
Alignment:
Q  57 tgtacctttttggtttggacttccaaagagtaatgcacttctacttatataatttccactgccactaagacctggacctcttaatccatccattcctttc 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  17581688 tgtacctttttgttttggacttccaaagagtaatgcacttctacttaaataatttccactgccagtgagacctggacctcttaatccatccattcctttc 17581787  T
Q  157 cacatcgtctaatagaa 173  Q
    ||| | |||||||||||    
T  17581788 caccttgtctaatagaa 17581804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 53996293 - 53996334
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  53996293 gtccttgtgagcttagctcagttggtatggacaatgcataat 53996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 19126744 - 19126704
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  19126744 gtccttgtgagcgtagttcagttggtatggacaatgcataa 19126704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 38131027 - 38130985
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  38131027 cgtccttgtgagcttaactcagttggtatggacaatgcataat 38130985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 271983 - 271874
Alignment:
Q  57 tgtacctttttggtttggacttccaaagagtaatgcacttctacttatataatttccactgccactaagacctggacctcttaatccatccattcctttc 156  Q
    ||||||||||||   |||||||||||| | ||||||||||||| | |  ||||| ||| |||||  |||||| |||||||| || |||||||| |||| |    
T  271983 tgtacctttttgaactggacttccaaataataatgcacttctattcaagtaattaccagtgccagaaagaccaggacctctcaaaccatccatcccttgc 271884  T
Q  157 cacatcgtct 166  Q
    ||||| ||||    
T  271883 cacattgtct 271874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 10498762 - 10498721
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  10498762 gtcctcgtgagcttagctcagttggtatggacaatgcataat 10498721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 8139710 - 8139750
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  8139710 tcctcgtgagcttagtttagttggtatggacaatgcataat 8139750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 21506825 - 21506785
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  21506825 gtcctcgtgagcttagctcagttggtatggacaatgcataa 21506785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 39481135 - 39481175
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  39481135 gtcctcgtgagcttagctcagttggtatggacaatgcataa 39481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 44579630 - 44579670
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataa 44579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 529180 - 529215
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||||||||| |||||||||||||    
T  529180 gtgagcttagttcagttggtatcgacaatgcataat 529215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 7938724 - 7938759
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||||||||| ||||||||||||    
T  7938724 gtgagcttagttcagttggtatgaacaatgcataat 7938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 25340990 - 25340951
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  25340990 tcctcgtgagcttagctcagttggtatggacaatgcataa 25340951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 47313433 - 47313398
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||| |||||||||||||||||||||||||    
T  47313433 gtgagcttagctcagttggtatggacaatgcataat 47313398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 50037311 - 50037346
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||| |||||||||||||||||||||||||    
T  50037311 gtgagcttagctcagttggtatggacaatgcataat 50037346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 14827525 - 14827559
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  14827525 gtgagcttagctcagttggtatggacaatgcataa 14827559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 255
Target Start/End: Original strand, 29631187 - 29631221
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| |||||||||||||||||||||||||    
T  29631187 tgagcttagctcagttggtatggacaatgcataat 29631221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 32629080 - 32629114
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  32629080 gtgagcttagctcagttggtatggacaatgcataa 32629114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 32836173 - 32836207
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  32836173 gtgagcttagctcagttggtatggacaatgcataa 32836207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 1149136 - 1149095
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  1149136 gtcctcgtgagcttagctcagttggtaaggacaatgcataat 1149095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 2496549 - 2496590
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||||||||||| |||| ||||||||||||    
T  2496549 gtcctcgtgagcttagttcagttgctatgaacaatgcataat 2496590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 3612249 - 3612208
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  3612249 gtccttgtgagcttagctcagttgatatggataatgcataat 3612208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 7557601 - 7557560
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  7557601 gtcctcgtgagcttaactcagttggtatggacaatgcataat 7557560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 9321468 - 9321431
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  9321468 ttgtgagcttagctcagttggtttggacaatgcataat 9321431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 12131736 - 12131699
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  12131736 ttgtgagcttagttcaattggtatagacaatgcataat 12131699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 16980421 - 16980380
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  16980421 gtcctcgtgagcttagctcagttggtaaggacaatgcataat 16980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 18870792 - 18870751
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataat 18870751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 19468449 - 19468486
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||  |||||||||||||||||||||||||    
T  19468449 ttgtgagcttaactcagttggtatggacaatgcataat 19468486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 21331484 - 21331443
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  21331484 gtcctcgtgagcttagctcagttgttatggacaatgcataat 21331443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 21513282 - 21513323
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
T  21513282 gtccctgtgagcttagctcagttggtaaggacaatgcataat 21513323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 24428532 - 24428499
Alignment:
Q  222 gagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||| |||||||||||||||||||||||||    
T  24428532 gagcttagctcagttggtatggacaatgcataat 24428499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 25441563 - 25441526
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  25441563 ttgtgaacttagctcagttggtatggacaatgcataat 25441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 45431942 - 45431983
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||| ||||||| |||||||||| ||||||||||||||    
T  45431942 gtccttgttagcttagctcagttggtagggacaatgcataat 45431983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 977999 - 977967
Alignment:
Q  223 agcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| |||||||||||||||||||||||||    
T  977999 agcttagctcagttggtatggacaatgcataat 977967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 3100215 - 3100255
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  3100215 gtcctcgtgagcttagctcagttggtgtggacaatgcataa 3100255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 5030200 - 5030240
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||| ||||||||||||||||| ||||||||||||    
T  5030200 tcctcgtgagtttagttcagttggtatgaacaatgcataat 5030240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 32843329 - 32843289
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  32843329 gtcctcgtgagcttagctcagttggtttggacaatgcataa 32843289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 53429146 - 53429190
Alignment:
Q  211 gacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||| ||||| |||| ||||||||||| |||||||||||||    
T  53429146 gacgtcctcgtgagtttagctcagttggtatagacaatgcataat 53429190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 25532954 - 25533008
Alignment:
Q  201 ataaaccaaagacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||    
T  25532954 ataaaccaaattagtcctcgtgagcttagttcagttggtatggacaatgcataat 25533008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 48100715 - 48100756
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  48100715 cgtccttgtgagcttagctcagttggtatggacaatgcataa 48100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 25086477 - 25086517
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  25086477 gtccttgtgagcttagctcagttggtatggacaatgcataa 25086517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 8253737 - 8253774
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||||||||    
T  8253737 ttgtgagcttagctcagttggtatggacaatgcataat 8253774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 24752715 - 24752674
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  24752715 gtcctcgtgagcttagctcagttggtatggacaatgcataat 24752674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 27533233 - 27533278
Alignment:
Q  210 agacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||    
T  27533233 agacgtcctcgtgagcttagatcagttggtagggacaatgcataat 27533278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 32944730 - 32944771
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  32944730 gtccttgtgagcttagcttagttggtatggacaatgcataat 32944771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 35308179 - 35308220
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  35308179 gtcctcgtgagcttagttcagttggtatgaacaatgcataat 35308220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 42045439 - 42045398
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  42045439 gtcctcgtgagcttagctcagttggtatggacaatgcataat 42045398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 40227823 - 40227863
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  40227823 gtccttatgagcttagctcagttggtatggacaatgcataa 40227863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 2613717 - 2613756
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  2613717 tcctcgtgagcttagctcagttggtatggacaatgcataa 2613756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 23309464 - 23309499
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||||||||| |||||||||||||    
T  23309464 gtgagcttagttcagttggtatagacaatgcataat 23309499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 28053302 - 28053267
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28053302 gtgagcttaattcagttggtatggacaatgcataat 28053267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 30003201 - 30003236
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  30003201 gtgagcttaattcagttggtatggacaatgcataat 30003236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 45140067 - 45140032
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||| |||||||||||||||||||||||||    
T  45140067 gtgagcttagctcagttggtatggacaatgcataat 45140032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 45190330 - 45190295
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||||||||||||||||||||||||    
T  45190330 gtgaacttagttcagttggtatggacaatgcataat 45190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 14520944 - 14520978
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  14520944 gtgagcttagctcagttggtatggacaatgcataa 14520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 15892797 - 15892831
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||||||||||||||||| |||||||||||    
T  15892797 gtgagcttagttcagttggtatgaacaatgcataa 15892831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 42888575 - 42888609
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  42888575 gtgagcttagctcagttggtatggacaatgcataa 42888609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 925487 - 925454
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||||||||||| ||||||||||||||||    
T  925487 tgagcttagttcagttgatatggacaatgcataa 925454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 1794590 - 1794631
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||| ||||||||||||||||||    
T  1794590 gtcctcgtgagcttagctcagttagtatggacaatgcataat 1794631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 13054867 - 13054908
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| | |||||||| ||||||||||||||    
T  13054867 gtccttgtgagcttagcttagttggtagggacaatgcataat 13054908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 15602244 - 15602203
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||| ||| |||||||||||||||||||||||||    
T  15602244 gtcctcgtgagcatagctcagttggtatggacaatgcataat 15602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 16826347 - 16826388
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  16826347 cgtcctcgtgagcttagctcagttgctatggacaatgcataa 16826388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 17139584 - 17139543
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  17139584 gtcctcgtgagcttagctcagttggtagggacaatgcataat 17139543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17188728 - 17188695
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||| ||||||||||||||||||||||||    
T  17188728 tgagcttagctcagttggtatggacaatgcataa 17188695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 21400090 - 21400049
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataat 21400049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 26803518 - 26803477
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||| ||||| |||||||||||||||||||||||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataat 26803477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 29935977 - 29936018
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||  |||||||||||||||||||||||||    
T  29935977 gtccttgtgagtttaactcagttggtatggacaatgcataat 29936018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 33153947 - 33153906
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||  |||||||||| ||||||||||||||    
T  33153947 gtccttgtgagcttaactcagttggtagggacaatgcataat 33153906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 34521253 - 34521216
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  34521253 ttgtgagtttagctcagttggtatggacaatgcataat 34521216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 36467092 - 36467051
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||| |||| ||| |||||||||||||||||    
T  36467092 gtccttgtgagcttaattcaattgatatggacaatgcataat 36467051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 48682000 - 48681959
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||| ||||||||||||    
T  48682000 gtcctcgtgagcttagctcagttggtatgaacaatgcataat 48681959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 52441578 - 52441537
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||||| |||||||||||||    
T  52441578 gtcctcgtgagcttagctcagttggtatagacaatgcataat 52441537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 6567704 - 6567744
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||| ||||||||||||||||||||    
T  6567704 gtcctcgtgagcttagctcaattggtatggacaatgcataa 6567744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 13590104 - 13590144
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  13590104 gtcctcgtgagcttagctcagttggtttggacaatgcataa 13590144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 17280151 - 17280115
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgc 250  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  17280151 gtcctcgtgagcttagctcagttggtatggacaatgc 17280115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 24162829 - 24162789
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  24162829 gtcctcgtgagcttagctctgttggtatggacaatgcataa 24162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 39452454 - 39452494
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  39452454 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 39452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 41926821 - 41926857
Alignment:
Q  219 tgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  41926821 tgtgagcttagctcagttggtaaggacaatgcataat 41926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 44340883 - 44340915
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcat 252  Q
    ||||||||||||||||| |||||||||||||||    
T  44340883 gtgagcttagttcagttagtatggacaatgcat 44340915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 12700488 - 12700447
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  12700488 gtccttgtgagcttagttcagttggtatgaacaatgcataat 12700447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 655816 - 655775
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  655816 gtccttgtgagcttagctcagttggtatcgacaatgcataat 655775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 9111041 - 9111082
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  9111041 gtcctcgtgagcttagttcagttggtatgaacaatgcataat 9111082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 32053782 - 32053823
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataat 32053823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 4494938 - 4494898
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  4494938 gtcctcgtgagcttagctcagttggtatggacaatgcataa 4494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 20744133 - 20744173
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataat 20744173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 26320624 - 26320590
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  26320624 gtgagcttagctcagttggtatggacaatgcataa 26320590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 361752 - 361789
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||  |||||||||||||||||||||||||    
T  361752 ttgtgagcttaactcagttggtatggacaatgcataat 361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7927694 - 7927735
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||||||||||| || ||||||||||||||    
T  7927694 gtcctcgtgagcttagttcagttgatagggacaatgcataat 7927735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 8637496 - 8637463
Alignment:
Q  222 gagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||||| ||||||||||||||    
T  8637496 gagcttagttcagttggtagggacaatgcataat 8637463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 9677229 - 9677270
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||| |||||||||||||||    
T  9677229 gtcctcgtgagcttagctcagttggtttggacaatgcataat 9677270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 13376306 - 13376347
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||| |||||||||||||||||||||    
T  13376306 gtcctcgtgagcttagctcaattggtatggacaatgcataat 13376347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 28318021 - 28318062
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||  ||||||||||||||||||||||||||||    
T  28318021 gtcctcgtgagcaaagttcagttggtatggacaatgcataat 28318062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 29740476 - 29740517
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||| |||||||||||||||||||||    
T  29740476 gtcctcgtgagcttagctcaattggtatggacaatgcataat 29740517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 34828300 - 34828341
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||| |||| |||||||||||||||||||||||||    
T  34828300 gtcctcgtgagtttagctcagttggtatggacaatgcataat 34828341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 3923218 - 3923178
Alignment:
Q  212 acgtccttgtgagcttagttcagttggtatggacaatgcat 252  Q
    |||| |||||||||||| ||||||||||||| |||||||||    
T  3923218 acgttcttgtgagcttaattcagttggtatgaacaatgcat 3923178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 12333635 - 12333595
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||| |||||||||||||||||    
T  12333635 gtcctcgtgagcttagctcagttagtatggacaatgcataa 12333595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 13044672 - 13044640
Alignment:
Q  223 agcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||||||||||||    
T  13044672 agcttagttcagttggcatggacaatgcataat 13044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 14297024 - 14296984
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  14297024 gtccttgtgagcttagctgagttggtatggacaatacataa 14296984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 17382079 - 17382119
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||| ||||||||||||||||||| |||||    
T  17382079 tcctcgtgagcttagctcagttggtatggacaatgtataat 17382119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 18254163 - 18254127
Alignment:
Q  219 tgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  18254163 tgtgagcttagctcagttggtaaggacaatgcataat 18254127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 26522471 - 26522507
Alignment:
Q  219 tgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  26522471 tgtgagcttagctcagttggtaaggacaatgcataat 26522507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 10704398 - 10704358
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  10704398 gtccttgtgagcttagctcagttggtatggacaatgcataa 10704358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 14188401 - 14188361
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  14188401 tccttgtgagcttagttcagttggtatggacaatccataat 14188361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 4573120 - 4573085
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  4573120 gtgagcttagttcagttggtatggacaatgcataat 4573085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 16089442 - 16089485
Alignment:
Q  212 acgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  16089442 acgtcctcgtaagcttagttcagttggtatggacaatgcataat 16089485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 16188817 - 16188859
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  16188817 cgtccttgtgaacttagctcagttggtatggacaatgcataat 16188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 16188919 - 16188961
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  16188919 cgtccttgtgaacttagctcagttggtatggacaatgcataat 16188961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 10199013 - 10199054
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  10199013 gtcctcgtgagcttagctcagttggtatggacaatgcataat 10199054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 12265915 - 12265948
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||||||||||||||||||||||||||||    
T  12265915 tgagcttagttcagttggtatggacaatgcataa 12265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 17239448 - 17239407
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  17239448 gtccttgtgagctttgctcagttggtatggacaatgcataat 17239407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 37932324 - 37932365
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataat 37932365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 18331701 - 18331741
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  18331701 gtccttgtgagcttagctcacttggtatggacaatgcataa 18331741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 28207126 - 28207166
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataa 28207166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 5485174 - 5485221
Alignment:
Q  208 aaagacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||| |||||||||| |||||||||| ||||||||||||||    
T  5485174 aaagaggtcctcgtgagcttagctcagttggtagggacaatgcataat 5485221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 26409253 - 26409288
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||| |||||||||||||||||||||||||    
T  26409253 gtgagcttagctcagttggtatggacaatgcataat 26409288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 32283579 - 32283614
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||| |||||||||||||||||||||||||    
T  32283579 gtgagcttagctcagttggtatggacaatgcataat 32283614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 42515807 - 42515842
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  42515807 gtgagcttaattcagttggtatggacaatgcataat 42515842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 15889404 - 15889446
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| |||||||||| |||||||||| ||||||||||||||    
T  15889404 cgtcctcgtgagcttagctcagttggtagggacaatgcataat 15889446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 16752562 - 16752528
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||||||| ||||||||||||||    
T  16752562 tgagcttagttcagttggtaaggacaatgcataat 16752528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 36321562 - 36321520
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| |||||||||| |||||||||| ||||||||||||||    
T  36321562 cgtcctcgtgagcttagctcagttggtaaggacaatgcataat 36321520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 1488365 - 1488398
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||| ||||||||||||||||||||||||    
T  1488365 tgagcttagctcagttggtatggacaatgcataa 1488398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 3445314 - 3445273
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  3445314 gtcctcgtgagcttagctcagttggtaaggacaatgcataat 3445273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 6489001 - 6489042
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataat 6489042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 6624770 - 6624811
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||| ||||||||||||||||    
T  6624770 gtcctcgtgagcttagctcagttggcatggacaatgcataat 6624811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8839449 - 8839490
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||| |||||||||||||| |||||||||||||    
T  8839449 gtcctcgtgagctaagttcagttggtatagacaatgcataat 8839490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 10531534 - 10531575
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||||| ||||| |||||||||||||||||    
T  10531534 gtcctcgtgagcttagtttagttgctatggacaatgcataat 10531575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 11720888 - 11720929
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||  |||||||||| ||||||||||||||    
T  11720888 gtccttgtgagcttaactcagttggtagggacaatgcataat 11720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 18489143 - 18489102
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| ||||||||||| |||||||||||||    
T  18489143 gtccttgtgagtttagctcagttggtatagacaatgcataat 18489102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 19248473 - 19248514
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||||| |||||||||||||    
T  19248473 gtcctcgtgagcttagctcagttggtatagacaatgcataat 19248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 20927637 - 20927674
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  20927637 ttgtgagcttagctcagttggtatggacaatacataat 20927674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22522868 - 22522827
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| || ||||||||||||||||||||||    
T  22522868 gtcctcgtgagcttagctcggttggtatggacaatgcataat 22522827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 24485693 - 24485734
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  24485693 gtcctcgtgagcttagcttagttggtatggacaatgcataat 24485734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 31561411 - 31561370
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  31561411 gtcctcgtgagcttaactcagttggtatggacaatgcataat 31561370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 34436845 - 34436886
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgcataat 34436886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 40056657 - 40056616
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||  |||||||||| ||||||||||||||    
T  40056657 gtccttgtgagcttaactcagttggtaaggacaatgcataat 40056616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 42505866 - 42505907
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| || ||||||| |||||||||||||||||||||||||    
T  42505866 gtcctcgtaagcttagctcagttggtatggacaatgcataat 42505907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 11637639 - 11637599
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  11637639 gtcctcgtgagcttaactcagttggtatggacaatgcataa 11637599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 16531337 - 16531301
Alignment:
Q  219 tgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  16531337 tgtgagcttggttcagttggtaaggacaatgcataat 16531301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 20175720 - 20175760
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||| ||||||||||||||||||| |||||    
T  20175720 tcctcgtgagcttagctcagttggtatggacaatgtataat 20175760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 26223388 - 26223352
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  26223388 ttgtgagcttagctcagttggtattgacaatgcataa 26223352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 32858664 - 32858704
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  32858664 gtcctcgtgagcttagctccgttggtatggacaatgcataa 32858704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 33133633 - 33133673
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||| |||||||||||||    
T  33133633 gtcctcgtgagcttagctcagttggtagggacaatgcataa 33133673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 37438594 - 37438554
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||||||| ||||||| ||||||||||||    
T  37438594 gtcctcgtgagcttagttcaattggtatagacaatgcataa 37438554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 19854560 - 19854600
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  19854560 tccttgtgagcttagctcagttggtatggacaatgcataat 19854600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 29681520 - 29681484
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||||||||||||||||||||||||    
T  29681520 ttgtgagcttagttcagttggtatggacaatgcataa 29681484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 2186400 - 2186359
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  2186400 gtcctcgtgagcttagctcagttggtatggacaatgcataat 2186359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 24479375 - 24479338
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||||||||    
T  24479375 ttgtgagcttagctcagttggtatggacaatgcataat 24479338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 28435315 - 28435274
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  28435315 gtccttgtgagtttagctcagttggtatggacaatgcataat 28435274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 30051934 - 30051893
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  30051934 gtcctcgtgagcttagttcagttgttatggacaatgcataat 30051893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 52270097 - 52270056
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  52270097 gtcctcgtgagcttagctcagttggtatggacaatgcataat 52270056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 1232847 - 1232807
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  1232847 gtccttgtaagcttagttcaattggtatggacaatgcataa 1232807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 9946421 - 9946461
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataa 9946461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 20383487 - 20383523
Alignment:
Q  219 tgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||||||||||||||||||||||||    
T  20383487 tgtgagcttagctcagttggtatggacaatgcataat 20383523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 10401463 - 10401424
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcata 253  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  10401463 gtcctcgtgagcttagttcagttggtatgaacaatgcata 10401424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 13964121 - 13964086
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||||||    
T  13964121 gtgagcttagttaagttggtatggacaatgcataat 13964086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 31780740 - 31780779
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  31780740 tccttgtgagcttagctcagttggtaaggacaatgcataa 31780779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 44221447 - 44221482
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44221447 gtgagcttaattcagttggtatggacaatgcataat 44221482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 51465337 - 51465372
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  51465337 gtgagcttaattcagttggtatggacaatgcataat 51465372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 8415555 - 8415521
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||| ||||||||||||||||||||||||||    
T  8415555 tgagcttaattcagttggtatggacaatgcataat 8415521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 9913891 - 9913933
Alignment:
Q  212 acgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||| |||||||||| |||||||||||| |||||||||||    
T  9913891 acgtcctcgtgagcttagctcagttggtatgaacaatgcataa 9913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 11949823 - 11949789
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| |||||||||||||||||||||||||    
T  11949823 tgagcttagctcagttggtatggacaatgcataat 11949789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 32180818 - 32180864
Alignment:
Q  208 aaagacgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||| |||||| |||||||||| ||||||||||| ||||||||||||    
T  32180818 aaagccgtcctcgtgagcttagctcagttggtatagacaatgcataa 32180864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 2580731 - 2580768
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  2580731 ttgtgagcttagctcagttggtatggacaatgcgtaat 2580768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 3936621 - 3936662
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||| |||||||||||| ||||||||||||    
T  3936621 gtccctgtgagcttagctcagttggtatgaacaatgcataat 3936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 6087741 - 6087782
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||||||| || ||||||||||    
T  6087741 gtccttgtgagcttagctcagttggtatagataatgcataat 6087782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7230274 - 7230315
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataat 7230315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 9539265 - 9539220
Alignment:
Q  209 aagacgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||| ||||| |||||||||| ||||||| ||||||||||||||||    
T  9539265 aagaagtcctcgtgagcttagctcagttgttatggacaatgcataa 9539220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 10519129 - 10519170
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| ||||||||| ||||||||||| |||||||||||||    
T  10519129 gtccttatgagcttagctcagttggtatagacaatgcataat 10519170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 12322667 - 12322708
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  12322667 gtcctcgtgagcttagctcagttggtacggacaatgcataat 12322708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 15849227 - 15849268
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||| |||||||||||||| |||||||||    
T  15849227 cgtcctcgtgagcttagctcagttggtatggataatgcataa 15849268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 16743351 - 16743310
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  16743351 gtccttgtgagcttagctcagttgatatggataatgcataat 16743310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 19588147 - 19588188
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||| ||| ||||||||||||||||||||    
T  19588147 cgtcctcgtgagcttagctcaattggtatggacaatgcataa 19588188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 20799461 - 20799420
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataat 20799420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 23809943 - 23809984
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||||||||||| |||||||    
T  23809943 gtcctcgtgagcttagctcagttggtatggacaaagcataat 23809984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 24665058 - 24665017
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  24665058 gtcctcgtgagcttagctcagttggtatggagaatgcataat 24665017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 26033269 - 26033310
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||| ||||||||||| |||||||||||||||||    
T  26033269 gtcctcgtgagcctagttcagttgatatggacaatgcataat 26033310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 34247434 - 34247475
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  34247434 gtccttgtgagtttagctcagttggtaaggacaatgcataat 34247475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 35287575 - 35287534
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||| |||||||||||| |||||||||||    
T  35287575 cgtcctcgtgagcttagctcagttggtatgaacaatgcataa 35287534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 35997993 - 35998034
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| ||||||| |||||||||||||||||    
T  35997993 gtccttgtgagtttagctcagttgatatggacaatgcataat 35998034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 36071138 - 36071179
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  36071138 gtccttgtgagtttaggtcagttggtaaggacaatgcataat 36071179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 38453259 - 38453300
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||| ||||||||||||||||    
T  38453259 gtcctcgtgagcttagctcagttggcatggacaatgcataat 38453300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 40160788 - 40160833
Alignment:
Q  210 agacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||| |||||||||||| ||||| |||||||    
T  40160788 agacgtcctcgtgagcttaattcagttggtatagacaacgcataat 40160833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 43034409 - 43034368
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataat 43034368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 43374340 - 43374299
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  43374340 cgtcctcgtgagcttagctcagttgatatggacaatgcataa 43374299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 50362206 - 50362165
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataat 50362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 10204843 - 10204875
Alignment:
Q  223 agcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| |||||||||||||||||||||||||    
T  10204843 agcttagctcagttggtatggacaatgcataat 10204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 10303578 - 10303538
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||| |||||||||||||    
T  10303578 gtcctcgtgagcttagctcagttggtaaggacaatgcataa 10303538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 11198758 - 11198798
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  11198758 gtcctcgtgagcttagctcagttggtatggagaatgcataa 11198798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 39171437 - 39171397
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  39171437 gtcctcgtgagcttagctcagttgatatggacaatgcataa 39171397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 51458676 - 51458712
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||| |||||||||||||||||| |||||    
T  51458676 ttgtgagcttagctcagttggtatggacaatacataa 51458712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 2958425 - 2958460
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  2958425 gtgagcttagttcagttggtatggacaatgcataat 2958460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 19163604 - 19163562
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  19163604 cgtcctcgtgagcttagctcagttggtatggacaatgcataat 19163562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7996934 - 7996975
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  7996934 gtccttgtgagcttagctcagttggtatggacaacgcataat 7996975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 12910873 - 12910832
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  12910873 gtccttgtgagattagctcagttggtatggacaatgcataat 12910832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 30427729 - 30427766
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||||||||    
T  30427729 ttgtgagcttagctcagttggtatggacaatgcataat 30427766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 8137926 - 8137969
Alignment:
Q  211 gacgtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||| || ||||||| ||||||||||||||||||||||||    
T  8137926 gacgtcctcgtaagcttagctcagttggtatggacaatgcataa 8137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 10601763 - 10601798
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  10601763 gtgagcttaattcagttggtatggacaatgcataat 10601798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 10871955 - 10871920
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||||||    
T  10871955 gtgagcttagtttagttggtatggacaatgcataat 10871920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 13286120 - 13286166
Alignment:
Q  209 aagacgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||    
T  13286120 aagatgtcctcgtgagcttagctcagttggtatagacaatgcataat 13286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 18942911 - 18942953
Alignment:
Q  213 cgtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||    
T  18942911 cgtccttgtgagcttagctcagttggtagggataatgcataat 18942953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 56871 - 56830
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  56871 gtccttgtgagcttaactcaattggtatggacaatgcataat 56830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 574378 - 574419
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  574378 gtccttgtgagcttagctcagttgatatagacaatgcataat 574419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 6235618 - 6235577
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| ||||||||||||||| |||||||||    
T  6235618 gtccttgtgagtttagctcagttggtatggacgatgcataat 6235577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 8910048 - 8910007
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
T  8910048 gtccatgtgagcttagctcagttggtaaggacaatgcataat 8910007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 11708980 - 11709021
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataat 11709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 13357508 - 13357467
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataat 13357467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 15225799 - 15225840
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||  |||||| ||||||||||||||||||    
T  15225799 gtccttgtgagcttaactcagttagtatggacaatgcataat 15225840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 23852905 - 23852946
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  23852905 gtcctcgtgagcttagctcagtcggtatggacaatgcataat 23852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 27718961 - 27718920
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataat 27718920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 30623287 - 30623328
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
T  30623287 gtccctgtgagcttagctcagttggtaaggacaatgcataat 30623328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 32051599 - 32051558
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||| ||||||||| |||||||||||||||    
T  32051599 gtccatgtgagcttagctcagttggtttggacaatgcataat 32051558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 33451416 - 33451375
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  33451416 gtcctcgtgagcttagctcagttggtatggataatgcataat 33451375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 39821878 - 39821919
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataat 39821919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 44293569 - 44293610
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||||| |||||||||||||    
T  44293569 gtcctcgtgagcttagctcagttggtatagacaatgcataat 44293610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 2554279 - 2554239
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  2554279 gtccttgtgagcttagctcagttgatatggacaatacataa 2554239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 8717541 - 8717501
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||| |||| |||||||||||||||||||||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataat 8717501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 17704008 - 17704048
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||| |||||||||| ||||||||||||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataat 17704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 24023879 - 24023839
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  24023879 gtccttgtgagcgtaactcagttggtatggacaatgcataa 24023839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 29499765 - 29499805
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||| ||||||||||||||||||||    
T  29499765 gtcctcgtgagcttagctcaattggtatggacaatgcataa 29499805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 255
Target Start/End: Original strand, 33555437 - 33555465
Alignment:
Q  227 tagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||||||||||||||||    
T  33555437 tagttcagttggtatggacaatgcataat 33555465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 5526719 - 5526760
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  5526719 gtcctcgtgagcttagctcagttggtatggacaatgcataat 5526760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 10244721 - 10244762
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  10244721 gtcctcgtgagcttagctcagttggtatggacaatgcataat 10244762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 20243249 - 20243290
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  20243249 gtcctcgtgagcttagctcagttggtatggacaatgcataat 20243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 39801700 - 39801741
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  39801700 gtcctcgtgagcttagctcagttggtatggacaatgcataat 39801741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 42043129 - 42043092
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42043129 ttgtgagcttagctcagttggtatggacaatgcataat 42043092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 48980481 - 48980522
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  48980481 gtcctcgtgagcttagctcagttggtatggacaatgcataat 48980522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 19416508 - 19416548
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  19416508 gtcctcgtgagcttagctcagttggtatggacaatgcataa 19416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 30397063 - 30397103
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  30397063 gtccttgtgagcttaggtcatttggtatggacaatgcataa 30397103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 38728202 - 38728242
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  38728202 gtcctcgtgagcttagctcagttggtatggacaatgcataa 38728242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 31038589 - 31038550
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcata 253  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  31038589 gtcctcgtgagcttagctcagttggtatggacaatgcata 31038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 22991455 - 22991417
Alignment:
Q  217 cttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  22991455 cttgtgagcttaactcagttggtatggacaatgcataat 22991417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 30793112 - 30793074
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcata 253  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  30793112 tccttgtgagcttaactcagttggtatggacaatgcata 30793074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 255
Target Start/End: Original strand, 38841988 - 38842022
Alignment:
Q  221 tgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||| |||||||||||||||||||||||||    
T  38841988 tgagcttagctcagttggtatggacaatgcataat 38842022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 43346628 - 43346590
Alignment:
Q  217 cttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  43346628 cttgtgaacttagctcagttggtatggacaatgcataat 43346590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 5579687 - 5579728
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| |||||||||| ||||| ||||||||    
T  5579687 gtccttgtgagcttagctcagttggtagggacagtgcataat 5579728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 8237699 - 8237658
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||    
T  8237699 gtcctcgtgagcttagttctgttggtaaggacaatgcataat 8237658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 8615021 - 8615058
Alignment:
Q  218 ttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  8615021 ttgtgagcttagctcagttggtaaggacaatgcataat 8615058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8683064 - 8683105
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||||| |||||||||||||    
T  8683064 gtcctcgtgagcttagctcagttggtatagacaatgcataat 8683105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8883547 - 8883588
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  8883547 gtcctcgtgagcttaactcagttggtatggacaatgcataat 8883588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 20455130 - 20455171
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||||||||||||| | |||||||||||||    
T  20455130 gtcctcgtgagcttagttcagttggtttagacaatgcataat 20455171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 24991775 - 24991816
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
T  24991775 gtccctgtgagcttagctcagttggtaaggacaatgcataat 24991816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 27462503 - 27462462
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||| ||| |||||||||||||||||||||||||    
T  27462503 gtcctcgtgagcatagctcagttggtatggacaatgcataat 27462462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 34369473 - 34369514
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||| |||||||||| ||||||||||||||||||    
T  34369473 gtcctcgtgagcatagttcagttagtatggacaatgcataat 34369514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35142216 - 35142175
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  35142216 gtcctcgtgagcttagctcagttgatatggacaatgcataat 35142175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 45051691 - 45051732
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| ||||||||| |||||||||||| ||||||||||||    
T  45051691 gtccttctgagcttagctcagttggtatgaacaatgcataat 45051732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 580993 - 580953
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  580993 gtcctcgtgagcttagctcggttggtatggacaatgcataa 580953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 3953436 - 3953476
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||| ||||| |||||||||||||||||||    
T  3953436 tcctcgtgagcttagctcagtcggtatggacaatgcataat 3953476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 4227595 - 4227555
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  4227595 gtcctcgtgagcttaactcagttggtatggacaatgcataa 4227555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 7705107 - 7705067
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||| |||||||||||||||    
T  7705107 gtcctcgtgagcttagctcagttggcatggacaatgcataa 7705067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 7908599 - 7908627
Alignment:
Q  226 ttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||||||||||||||||    
T  7908599 ttagttcagttggtatggacaatgcataa 7908627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 21105602 - 21105638
Alignment:
Q  219 tgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  21105602 tgtgagcttagctcagttggtatggaaaatgcataat 21105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 21993176 - 21993216
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  21993176 gtcctcgtgagcttaactcagttggtatggacaatgcataa 21993216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 25888895 - 25888935
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  25888895 tccttgtgagcttagctcagttggtaaggacgatgcataat 25888935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 37516869 - 37516829
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||  |||||| |||||||||||||||||    
T  37516869 gtccttgtgagcttaactcagttagtatggacaatgcataa 37516829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 41527555 - 41527595
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataat 41527595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 46207754 - 46207794
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  46207754 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 46207794  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 47342671 - 47342711
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||| ||||| ||||||||||||||||||||||||    
T  47342671 gtcctcgtgaacttagctcagttggtatggacaatgcataa 47342711  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 47589620 - 47589580
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  47589620 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 47589580  T

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Target: scaffold0458 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 11219 - 11179
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  11219 gtcctcgtgagcttagatcagttggtatggacaatgcataa 11179  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 161135 - 161175
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  161135 gtccttgtgagcttaactcagttggtatggacaatgcataa 161175  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 39998 - 40033
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||| |||||||||||||||||||||||||    
T  39998 gtgagcttagctcagttggtatggacaatgcataat 40033  T

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Target: scaffold0735 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1528 - 1562
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  1528 gtgagcttagctcagttggtatggacaatgcataa 1562  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 47302 - 47268
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  47302 gtgagcttagctcagttggtatggacaatgcataa 47268  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 361309 - 361275
Alignment:
Q  220 gtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||||||||||||||||||||||| |||||||||    
T  361309 gtgagcttagttcagttggtatggataatgcataa 361275  T

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Target: scaffold0567 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 7606 - 7565
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||  ||||||||||||||||||||||||||||    
T  7606 gtcctcgtgagcaaagttcagttggtatggacaatgcataat 7565  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 5176 - 5217
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||||||||| |||| ||| |||||||||||||||||||||    
T  5176 gtccttgtgagtttagctcaattggtatggacaatgcataat 5217  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 56778 - 56819
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||||||||||||| |||||    
T  56778 gtcctcgtgagcttagctcagttggtatggacaatgtataat 56819  T

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Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 58847 - 58888
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  58847 gtcctcgtgagcttagctcagttggtatggataatgcataat 58888  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 109127 - 109168
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| ||||||  ||||||||||||||||||||||||||||    
T  109127 gtcctcgtgagcaaagttcagttggtatggacaatgcataat 109168  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 64212 - 64253
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  64212 gtccttgtgagcttagctcaactggtatggacaatgcataat 64253  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 208936 - 208977
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    ||||| |||||||||| ||||||||| |||||||||||||||    
T  208936 gtcctcgtgagcttagctcagttggtttggacaatgcataat 208977  T

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Target: scaffold0743 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 1485 - 1445
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  1485 tcctcgtgagcttagcacagttggtatggacaatgcataat 1445  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 28180 - 28140
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    ||||| ||||| |||| ||||||||||||||||||||||||    
T  28180 gtcctcgtgagtttagctcagttggtatggacaatgcataa 28140  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 31221 - 31181
Alignment:
Q  215 tccttgtgagcttagttcagttggtatggacaatgcataat 255  Q
    |||||| ||| |||| |||||||||||||||||||||||||    
T  31221 tccttgcgagtttagctcagttggtatggacaatgcataat 31181  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 18888 - 18928
Alignment:
Q  214 gtccttgtgagcttagttcagttggtatggacaatgcataa 254  Q
    |||||||||||| ||| ||| ||||||||||||||||||||    
T  18888 gtccttgtgagcatagctcaattggtatggacaatgcataa 18928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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