View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18901_high_20 (Length: 259)
Name: NF18901_high_20
Description: NF18901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18901_high_20 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 55310120 - 55310349
Alignment:
| Q |
13 |
aatatgtttgttgcgttgaagatgagtcttggtatagatggaagtttagaatagctcttggagcataaaccgttaacatgtttgaaccatgatataatat |
112 |
Q |
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| T |
55310120 |
aatatgtttgttgcgttgaagatgagtcttggtatagatggaagtttagaatagctcttggagcataaatcgttaacatgtttgaaccatgatataatat |
55310219 |
T |
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| Q |
113 |
gatattgctcccttcaaaaataaccaagaaatgaattaatagaaagaagtggttt-actattaagagaaatataacaaagatataaaaacataaggaaga |
211 |
Q |
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| T |
55310220 |
gatattgctcccttc-aaaataaccaagaaatgaattaatagaaagaagtggtttaactattaagagaaatataacaaagatataaaaacataaggaaga |
55310318 |
T |
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| Q |
212 |
gggatggtatacctgtttgatggtaagcata |
242 |
Q |
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| T |
55310319 |
gggatgatatacctgtttgatggtaagcata |
55310349 |
T |
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