View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18901_low_19 (Length: 268)

Name: NF18901_low_19
Description: NF18901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18901_low_19
NF18901_low_19
[»] chr6 (45 HSPs)
chr6 (13-268)||(2732893-2733148)
chr6 (55-135)||(14399814-14399893)
chr6 (54-165)||(1912458-1912569)
chr6 (17-135)||(33532473-33532590)
chr6 (17-113)||(2457180-2457273)
chr6 (35-123)||(28640488-28640576)
chr6 (45-135)||(11602521-11602611)
chr6 (40-156)||(7939859-7939975)
chr6 (45-116)||(9163745-9163816)
chr6 (50-116)||(26373077-26373143)
chr6 (71-148)||(9074105-9074182)
chr6 (56-116)||(9194433-9194493)
chr6 (93-152)||(33282734-33282793)
chr6 (60-118)||(653351-653409)
chr6 (57-135)||(770343-770421)
chr6 (80-118)||(2231090-2231128)
chr6 (70-144)||(14933137-14933211)
chr6 (41-119)||(21869848-21869926)
chr6 (45-135)||(29243074-29243164)
chr6 (83-117)||(33735435-33735469)
chr6 (40-125)||(1906845-1906930)
chr6 (58-135)||(2766868-2766945)
chr6 (50-103)||(4886204-4886257)
chr6 (44-117)||(8432017-8432090)
chr6 (56-116)||(264555-264615)
chr6 (58-130)||(6012248-6012320)
chr6 (63-119)||(14933023-14933079)
chr6 (39-123)||(33996332-33996416)
chr6 (88-135)||(739704-739751)
chr6 (58-121)||(5730189-5730252)
chr6 (88-135)||(19390976-19391023)
chr6 (106-177)||(30532117-30532188)
chr6 (93-152)||(33260438-33260497)
chr6 (72-123)||(33851279-33851330)
chr6 (56-102)||(3736992-3737038)
chr6 (56-114)||(26494408-26494466)
chr6 (42-112)||(31322632-31322702)
chr6 (42-116)||(31694723-31694797)
chr6 (90-152)||(33386192-33386254)
chr6 (13-78)||(2496383-2496447)
chr6 (89-122)||(4354338-4354371)
chr6 (90-155)||(9075206-9075271)
chr6 (54-107)||(29404955-29405008)
chr6 (88-125)||(32392369-32392406)
chr6 (56-116)||(24769309-24769369)
[»] chr1 (38 HSPs)
chr1 (42-125)||(15606321-15606404)
chr1 (56-140)||(7347693-7347777)
chr1 (56-135)||(6025952-6026031)
chr1 (54-124)||(17473136-17473206)
chr1 (40-117)||(52517064-52517141)
chr1 (50-117)||(30882449-30882515)
chr1 (42-116)||(44417783-44417857)
chr1 (56-181)||(43391470-43391595)
chr1 (56-125)||(47847982-47848050)
chr1 (59-125)||(3240482-3240548)
chr1 (17-179)||(15794004-15794165)
chr1 (56-124)||(15955893-15955961)
chr1 (58-114)||(32868272-32868328)
chr1 (61-116)||(33651660-33651715)
chr1 (63-125)||(15592675-15592737)
chr1 (85-135)||(26161587-26161637)
chr1 (56-125)||(3950673-3950742)
chr1 (54-135)||(7991516-7991597)
chr1 (56-125)||(15923758-15923827)
chr1 (39-144)||(26360296-26360401)
chr1 (56-117)||(32721421-32721482)
chr1 (56-107)||(11766188-11766237)
chr1 (56-140)||(12764017-12764101)
chr1 (40-124)||(28067473-28067557)
chr1 (62-133)||(400901-400972)
chr1 (50-125)||(11049047-11049122)
chr1 (70-117)||(46331109-46331156)
chr1 (56-122)||(3335145-3335211)
chr1 (59-116)||(4541583-4541638)
chr1 (43-117)||(15190855-15190929)
chr1 (59-135)||(15364936-15365009)
chr1 (69-119)||(19392212-19392262)
chr1 (45-123)||(50322030-50322108)
chr1 (56-117)||(14643201-14643262)
chr1 (56-113)||(15956878-15956935)
chr1 (61-117)||(1880082-1880137)
chr1 (56-116)||(46937570-46937630)
chr1 (41-113)||(48432631-48432703)
[»] chr7 (38 HSPs)
chr7 (40-124)||(7245942-7246026)
chr7 (42-123)||(6894305-6894386)
chr7 (54-124)||(1110401-1110471)
chr7 (56-125)||(38774312-38774381)
chr7 (60-135)||(24942499-24942574)
chr7 (43-117)||(2219525-2219599)
chr7 (56-178)||(30900051-30900173)
chr7 (56-110)||(39417762-39417816)
chr7 (56-125)||(23747323-23747392)
chr7 (56-156)||(38921262-38921362)
chr7 (54-112)||(1109354-1109412)
chr7 (56-118)||(13380906-13380968)
chr7 (70-124)||(21451517-21451571)
chr7 (56-166)||(23218571-23218681)
chr7 (42-95)||(400623-400676)
chr7 (88-125)||(5260422-5260459)
chr7 (56-113)||(21450959-21451016)
chr7 (71-119)||(8095907-8095955)
chr7 (56-116)||(23117360-23117420)
chr7 (71-135)||(44124546-44124610)
chr7 (56-135)||(1662624-1662703)
chr7 (88-135)||(10455094-10455141)
chr7 (90-177)||(24673364-24673451)
chr7 (57-120)||(33007893-33007955)
chr7 (58-117)||(37233722-37233781)
chr7 (42-125)||(38622871-38622954)
chr7 (42-112)||(7982345-7982415)
chr7 (42-100)||(21343694-21343752)
chr7 (43-113)||(25268805-25268875)
chr7 (74-116)||(30885321-30885363)
chr7 (54-136)||(33581726-33581808)
chr7 (90-124)||(40869547-40869581)
chr7 (49-114)||(30408257-30408321)
chr7 (42-135)||(31838837-31838929)
chr7 (56-117)||(32231762-32231823)
chr7 (83-136)||(32888963-32889016)
chr7 (92-125)||(34925312-34925345)
chr7 (43-115)||(25314032-25314104)
[»] chr5 (40 HSPs)
chr5 (42-117)||(11257714-11257789)
chr5 (48-125)||(21047059-21047136)
chr5 (56-105)||(39647139-39647188)
chr5 (56-156)||(7430118-7430218)
chr5 (56-120)||(27731590-27731654)
chr5 (42-125)||(39159727-39159810)
chr5 (44-125)||(16973824-16973905)
chr5 (43-183)||(34156643-34156783)
chr5 (56-120)||(41894417-41894481)
chr5 (22-124)||(40677960-40678061)
chr5 (55-117)||(41015003-41015065)
chr5 (56-125)||(6202589-6202658)
chr5 (17-165)||(6586482-6586627)
chr5 (56-117)||(33342728-33342789)
chr5 (42-123)||(41991173-41991254)
chr5 (40-113)||(43283418-43283491)
chr5 (70-181)||(9446286-9446400)
chr5 (41-117)||(31029562-31029638)
chr5 (48-116)||(40990949-40991017)
chr5 (17-79)||(8977426-8977485)
chr5 (42-113)||(16033019-16033090)
chr5 (42-125)||(29466168-29466250)
chr5 (81-115)||(17855226-17855260)
chr5 (56-126)||(18551479-18551549)
chr5 (40-78)||(18839185-18839223)
chr5 (54-116)||(19115099-19115160)
chr5 (56-114)||(20981270-20981328)
chr5 (54-124)||(40213882-40213951)
chr5 (55-125)||(41376333-41376402)
chr5 (56-85)||(1792110-1792139)
chr5 (50-115)||(7477556-7477621)
chr5 (56-125)||(14956693-14956762)
chr5 (56-117)||(38346862-38346923)
chr5 (49-102)||(39647243-39647296)
chr5 (81-125)||(631483-631527)
chr5 (89-165)||(4787945-4788021)
chr5 (81-113)||(13996378-13996410)
chr5 (70-122)||(34451993-34452045)
chr5 (59-119)||(37056370-37056430)
chr5 (89-117)||(41399570-41399598)
[»] chr2 (37 HSPs)
chr2 (78-163)||(27317996-27318081)
chr2 (45-112)||(33958230-33958297)
chr2 (55-125)||(26174925-26174994)
chr2 (54-135)||(11530027-11530108)
chr2 (57-116)||(41631885-41631944)
chr2 (60-135)||(42616723-42616798)
chr2 (51-145)||(17442941-17443035)
chr2 (40-120)||(44458225-44458305)
chr2 (56-119)||(4204949-4205011)
chr2 (72-127)||(18569435-18569490)
chr2 (49-156)||(31790447-31790554)
chr2 (47-118)||(39597568-39597639)
chr2 (42-112)||(20547095-20547165)
chr2 (56-144)||(2045047-2045133)
chr2 (55-113)||(11328128-11328188)
chr2 (71-116)||(28044715-28044760)
chr2 (56-125)||(28804336-28804405)
chr2 (93-134)||(32321501-32321542)
chr2 (68-117)||(33971657-33971706)
chr2 (89-141)||(3110516-3110568)
chr2 (42-126)||(20265521-20265605)
chr2 (56-124)||(29378509-29378577)
chr2 (61-125)||(29728763-29728827)
chr2 (89-120)||(12749997-12750028)
chr2 (54-116)||(16733711-16733773)
chr2 (62-116)||(29415748-29415802)
chr2 (82-124)||(31235209-31235251)
chr2 (56-117)||(18104051-18104112)
chr2 (56-125)||(25694401-25694470)
chr2 (89-118)||(44460364-44460393)
chr2 (84-124)||(31246953-31246993)
chr2 (55-135)||(32562372-32562450)
chr2 (56-116)||(33623675-33623735)
chr2 (84-132)||(35538056-35538104)
chr2 (88-116)||(36300414-36300442)
chr2 (49-125)||(38475860-38475936)
chr2 (56-120)||(42172801-42172865)
[»] chr3 (34 HSPs)
chr3 (57-125)||(25252041-25252109)
chr3 (44-116)||(32251006-32251078)
chr3 (60-135)||(50402635-50402710)
chr3 (56-125)||(43381176-43381245)
chr3 (56-120)||(15802573-15802637)
chr3 (42-125)||(38692427-38692510)
chr3 (81-156)||(50251516-50251591)
chr3 (70-117)||(53855744-53855791)
chr3 (39-117)||(21754221-21754299)
chr3 (58-115)||(25490545-25490602)
chr3 (42-110)||(14199985-14200053)
chr3 (40-116)||(48236287-48236363)
chr3 (42-116)||(10275819-10275894)
chr3 (54-116)||(2990983-2991045)
chr3 (50-116)||(6994327-6994393)
chr3 (56-117)||(11338510-11338573)
chr3 (57-101)||(16169188-16169232)
chr3 (58-145)||(29279205-29279293)
chr3 (56-136)||(31386057-31386136)
chr3 (58-110)||(51295684-51295736)
chr3 (69-117)||(54842196-54842244)
chr3 (71-114)||(27016927-27016970)
chr3 (58-116)||(20690081-20690139)
chr3 (77-135)||(42064160-42064218)
chr3 (41-102)||(48198079-48198141)
chr3 (51-136)||(1813265-1813349)
chr3 (54-115)||(24830135-24830196)
chr3 (39-124)||(32954243-32954328)
chr3 (89-122)||(39544175-39544208)
chr3 (71-144)||(43307600-43307673)
chr3 (92-125)||(50376231-50376264)
chr3 (56-116)||(162903-162963)
chr3 (56-116)||(29208265-29208325)
chr3 (89-117)||(34363256-34363284)
[»] chr8 (39 HSPs)
chr8 (60-117)||(33120560-33120617)
chr8 (56-116)||(2302706-2302766)
chr8 (42-154)||(27483037-27483149)
chr8 (56-146)||(30560088-30560179)
chr8 (42-120)||(26273036-26273114)
chr8 (56-117)||(8282849-8282910)
chr8 (42-135)||(21226911-21227004)
chr8 (40-125)||(37632120-37632205)
chr8 (56-117)||(45371098-45371159)
chr8 (41-124)||(4050427-4050511)
chr8 (40-123)||(27400521-27400604)
chr8 (77-135)||(13869826-13869884)
chr8 (59-117)||(30692459-30692517)
chr8 (54-135)||(29749219-29749300)
chr8 (88-156)||(3556650-3556718)
chr8 (17-121)||(24857327-24857430)
chr8 (51-135)||(40710077-40710160)
chr8 (44-134)||(13850991-13851079)
chr8 (54-97)||(18737690-18737733)
chr8 (44-115)||(24855531-24855602)
chr8 (60-135)||(26445499-26445574)
chr8 (57-116)||(32616769-32616828)
chr8 (89-124)||(44617697-44617732)
chr8 (50-116)||(9112412-9112478)
chr8 (55-125)||(12196923-12196992)
chr8 (55-125)||(12441351-12441420)
chr8 (42-135)||(2701657-2701749)
chr8 (56-117)||(4114736-4114796)
chr8 (45-114)||(14928232-14928301)
chr8 (90-119)||(16950289-16950318)
chr8 (55-116)||(42843363-42843424)
chr8 (56-117)||(44806258-44806319)
chr8 (40-135)||(1318620-1318716)
chr8 (56-104)||(3238297-3238345)
chr8 (45-109)||(8284356-8284420)
chr8 (40-115)||(12856408-12856481)
chr8 (41-125)||(14730294-14730378)
chr8 (63-135)||(39550949-39551021)
chr8 (40-124)||(43935142-43935226)
[»] chr4 (45 HSPs)
chr4 (56-125)||(415145-415214)
chr4 (53-114)||(55314493-55314554)
chr4 (56-116)||(13298529-13298589)
chr4 (50-125)||(50794568-50794643)
chr4 (69-135)||(34581592-34581658)
chr4 (62-115)||(2843583-2843636)
chr4 (56-135)||(3301608-3301687)
chr4 (56-187)||(7295045-7295176)
chr4 (42-121)||(17223403-17223482)
chr4 (42-113)||(20709960-20710031)
chr4 (42-125)||(25402826-25402909)
chr4 (65-128)||(31675030-31675093)
chr4 (56-122)||(27722407-27722473)
chr4 (61-123)||(34417827-34417889)
chr4 (89-134)||(3144541-3144586)
chr4 (56-116)||(37538421-37538484)
chr4 (56-117)||(37579590-37579651)
chr4 (51-116)||(48244443-48244508)
chr4 (91-136)||(56049770-56049815)
chr4 (77-117)||(1202394-1202434)
chr4 (40-124)||(1276902-1276986)
chr4 (56-124)||(2562482-2562550)
chr4 (89-125)||(20989525-20989561)
chr4 (42-166)||(39032511-39032635)
chr4 (40-123)||(13458783-13458866)
chr4 (89-124)||(18968308-18968343)
chr4 (58-116)||(19062218-19062274)
chr4 (42-81)||(39064896-39064935)
chr4 (58-125)||(47789165-47789232)
chr4 (57-123)||(26275534-26275600)
chr4 (50-116)||(33714228-33714294)
chr4 (69-123)||(34417346-34417400)
chr4 (55-109)||(38596717-38596771)
chr4 (88-117)||(4762551-4762580)
chr4 (56-109)||(9318706-9318759)
chr4 (13-78)||(27098969-27099033)
chr4 (56-117)||(47486045-47486106)
chr4 (58-123)||(53768201-53768266)
chr4 (72-116)||(681986-682030)
chr4 (42-102)||(3625744-3625804)
chr4 (80-156)||(8721885-8721961)
chr4 (56-116)||(30617270-30617329)
chr4 (56-116)||(34416907-34416967)
chr4 (81-125)||(37854003-37854047)
chr4 (89-125)||(41367197-41367233)
[»] scaffold0428 (2 HSPs)
scaffold0428 (93-152)||(11459-11518)
scaffold0428 (93-152)||(4494-4553)
[»] scaffold0940 (1 HSPs)
scaffold0940 (41-123)||(2031-2113)
[»] scaffold0491 (1 HSPs)
scaffold0491 (54-97)||(4389-4432)
[»] scaffold0041 (1 HSPs)
scaffold0041 (90-124)||(96701-96735)
[»] scaffold0898 (1 HSPs)
scaffold0898 (56-117)||(534-594)
[»] scaffold0223 (1 HSPs)
scaffold0223 (56-187)||(10608-10740)
[»] scaffold0194 (1 HSPs)
scaffold0194 (56-124)||(13786-13854)


Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-138; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 2732893 - 2733148
Alignment:
Q  13 aatattgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2732893 aatattgttaaatagcggcattatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 2732992  T
Q  113 atagcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctgcgattgacaacattgtatcacatacaatcagtaaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2732993 atagcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctgcgattgacaacaatgtatcacatacaatcagtaaa 2733092  T
Q  213 acagcccttaatagtgaatatataaacacagattgtagcacggagatatctctaac 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733093 acagcccttaatagtgaatatataaacacagattgtagcacggagatatctctaac 2733148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 14399814 - 14399893
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14399814 aaatttaaacaaaccgctattgttttgtgata-gctatttagtacaaagtgttgtcaaatagcagctatagaggctctata 14399893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 1912569 - 1912458
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgga 153  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||  |||||| | |||||||  ||  ||| ||||||||    
T  1912569 gaaatttgaacaaatcgctattgttctgcgatatactatttagtacaaattattgtcaaatagcgactatagtgacgctatagcaccgttgcatagcgga 1912470  T
Q  154 attcaaacaaac 165  Q
    |||  |||||||    
T  1912469 atttgaacaaac 1912458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 33532590 - 33532473
Alignment:
Q  17 ttgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||| ||||||||| |||||| |||||||||||    |||||||||||||||| ||||||   | ||| ||||||||||||| |||||||||||| ||    
T  33532590 ttgttagatagcggcgctatagc-actatagcgtaacagaatttgaacaaatcgccattgttacactatacgctatttagtacagaatgttgtcaaacag 33532492  T
Q  117 cagctatagaggcgctata 135  Q
    |||||||||  ||||||||    
T  33532491 cagctatagttgcgctata 33532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 2457180 - 2457273
Alignment:
Q  17 ttgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    |||||||||||||||  |||||| | ||||| |||||| |||||||| |||   ||||||||||| |||||||||||||||||||||||||||||||    
T  2457180 ttgttaaatagcggc--tatagc-agtatagtgtagtggaatttgaaaaaacgactattgttttgtgatatgctatttagtacaaaatgttgtcaaa 2457273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 28640488 - 28640576
Alignment:
Q  35 atagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    |||||| ||||||| |||||||||||||||| |||| ||||||| ||| ||| ||| ||| |||||||||| ||||||||||| |||||    
T  28640488 atagccgctatagcatagtgaaatttgaacagatcgatattgttctgcaatacgctgtttcgtacaaaatgctgtcaaatagcggctat 28640576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 11602611 - 11602521
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||||||||||||||||||||||||||||||  | |  | |||||||| ||| ||||||||||||| |||| |||  ||||||||    
T  11602611 tagcgtagtgaaatttgaacaaatcgctattgttttgtaacaaacaatttagtataaagtgttgtcaaatagaagctttagctgcgctata 11602521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 7939859 - 7939975
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatac 139  Q
    |||||||||||| ||||||||||  ||||| |||||||| || ||||  ||||| |||||||| || ||||||||||| ||||||| ||| |||||  ||    
T  7939859 cactatagcgtaatgaaatttgattaaatcactattgttctgagatactctattcagtacaaagtgatgtcaaatagcggctatagtggctctatagcac 7939958  T
Q  140 tattgtatagcggaatt 156  Q
    | | | |||||||||||    
T  7939959 tgtagcatagcggaatt 7939975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 9163745 - 9163816
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||  ||||||||||||||| ||||||||  |  ||| |||||||||||||||||||||||||||||    
T  9163745 tagcgtagaaaaatttgaacaaatccctattgttccgttatacgctatttagtacaaaatgttgtcaaatag 9163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 26373077 - 26373143
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||| |||||||| || |||||||| || |||| ||||||||||||||| |||||||||||||    
T  26373077 tagtgaaaattgaacaactcactattgttctgtgatacgctatttagtacaaagtgttgtcaaatag 26373143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 9074182 - 9074105
Alignment:
Q  71 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtata 148  Q
    ||||||||||||||||  ||||||| ||||||||||| ||||||||  ||||||| |||||||||  ||| |||||||    
T  9074182 ctattgttttgcgatacactatttactacaaaatgttatcaaatagaggctatagcggcgctatagcactgttgtata 9074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 9194493 - 9194433
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||| |||||||| ||||||||| ||| ||| | |||||||||||||||||||||||||||    
T  9194493 aattggaacaaattgctattgttctgctatacggtatttagtacaaaatgttgtcaaatag 9194433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 33282734 - 33282793
Alignment:
Q  93 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 152  Q
    ||||| ||||||||||| |||||||| |||||| |||||||||| |||||||| ||||||    
T  33282734 ttagtgcaaaatgttgtgaaatagcatctatagtggcgctataaaactattgtgtagcgg 33282793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 653351 - 653409
Alignment:
Q  60 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagca 118  Q
    ||||||||||| ||||| | || |||||||||||||| ||||| |||||||||||||||    
T  653351 tgaacaaatcggtattgatatgtgatatgctatttagcacaaactgttgtcaaatagca 653409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 770343 - 770421
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||||||| |||||||  | |||| |||||||||||||||  ||||||||||||| |||  || |||||||||    
T  770343 atttgaacaaatcggtattgttccgtgatacgctatttagtacaaagggttgtcaaatagcggctgcagtggcgctata 770421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 2231128 - 2231090
Alignment:
Q  80 tgcgatatgctatttagtacaaaatgttgtcaaatagca 118  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  2231128 tgcgatatgctatttagtacaaaatgttgtccaatagca 2231090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 14933137 - 14933211
Alignment:
Q  70 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattg 144  Q
    ||||||||| |||||||  || ||||||||||| |||||||| ||||| | ||||| |||||||||| |||||||    
T  14933137 gctattgttctgcgatacactctttagtacaaattgttgtcagatagcggatatagtggcgctataacactattg 14933211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 21869848 - 21869926
Alignment:
Q  41 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 119  Q
    ||||||||||||   |||| |||||||||  |||||||  | ||||  |||||||||||||||||||||||||||||||    
T  21869848 actatagcgtagcagaattcgaacaaatcattattgttccgtgatacactatttagtacaaaatgttgtcaaatagcag 21869926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 29243164 - 29243074
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||| ||||||||||| || |||||||| || ||||  ||||||| || ||||| | ||||||| || ||||||| |||||||||    
T  29243164 tagcgtagtggaatttgaacaattctctattgttctgggatacactatttaatataaaatctagtcaaattgcggctatagtggcgctata 29243074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 33735469 - 33735435
Alignment:
Q  83 gatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||||||||||||||||||||||||    
T  33735469 gatatgctatttagtacaaaatgttgtcaaatagc 33735435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 1906930 - 1906845
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||| | |||| |||||||||||||| |||||||| ||| | |   ||||||||||||| |||| |||||||||||| ||||    
T  1906930 cactatagtgcagtggaatttgaacaaatcactattgttctgcaacaaaatatttagtacaaattgttatcaaatagcagcgatag 1906845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 2766868 - 2766945
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||||| |||||||| || |||| | ||||||||| ||||| ||||||||||| ||| ||||| || |||||    
T  2766868 tttgaacaaatctctattgttatgtgatacgttatttagtataaaatattgtcaaatagtagccatagaagcactata 2766945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 4886204 - 4886257
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaa 103  Q
    ||||| |||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  4886204 tagtggaatttgaacaaatctctattgttccgcgatatgctatttagtgcaaaa 4886257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 8432017 - 8432090
Alignment:
Q  44 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||  ||||||||||||||||||||| ||  || | |||||| |||||||||| || |||||||||||    
T  8432017 atagcgtagcaaaatttgaacaaatcgctattattcagcaagatgctaattagtacaaagtgctgtcaaatagc 8432090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 264555 - 264615
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||| | ||||||| || | || ||||||||||||||| |||||||||||||    
T  264555 aatttgaacaaattgttattgttctgtggtaggctatttagtacaaagtgttgtcaaatag 264615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 6012248 - 6012320
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcg 130  Q
    |||||||| |||||||||| | || ||||  ||||||||| |||| |||||||||||||||||| ||| ||||    
T  6012248 tttgaacacatcgctattgctctgtgatactctatttagttcaaactgttgtcaaatagcagctttagcggcg 6012320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 14933079 - 14933023
Alignment:
Q  63 acaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 119  Q
    ||||| |||||||||| ||| |||  ||||||||||||||||||||||| |||||||    
T  14933079 acaaaccgctattgttctgcaatacactatttagtacaaaatgttgtcagatagcag 14933023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 33996416 - 33996332
Alignment:
Q  39 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    |||||| ||||||| | |||||||||||| ||||||||||  || ||  ||| |||| |||||||||||||| |||||| |||||    
T  33996416 ccactaaagcgtagcggaatttgaacaaaccgctattgttccgcaatccgctttttactacaaaatgttgtctaatagctgctat 33996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 739704 - 739751
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||| ||||||||||| |||||||||||||||||||| ||| |||||    
T  739704 gctatatagtacaaaatattgtcaaatagcagctatagtggcactata 739751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 5730252 - 5730189
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagct 121  Q
    |||||| |||||||| |||||    |||||||||||||||||||||| ||||||||||| ||||    
T  5730252 tttgaataaatcgctcttgttccatgatatgctatttagtacaaaatcttgtcaaatagtagct 5730189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 19390976 - 19391023
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||    
T  19390976 gctatttagtacaaagtattgtcaaatagcagttatagtggcgctata 19391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 30532188 - 30532117
Alignment:
Q  106 ttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctg 177  Q
    |||||||||||| | ||||||||||||||| |||| | || ||| ||||||| ||||||| ||||| |||||    
T  30532188 ttgtcaaatagcggttatagaggcgctatagtactgtagtgtagaggaattcgaacaaaccactattttctg 30532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 33260438 - 33260497
Alignment:
Q  93 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 152  Q
    ||||| ||||||||||| |||||||| |||||| || ||||||| |||||||| ||||||    
T  33260438 ttagtgcaaaatgttgtgaaatagcatctatagtggtgctataaaactattgtgtagcgg 33260497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 33851330 - 33851279
Alignment:
Q  72 tattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||||| |||||    
T  33851330 tattgttttgtcatatgctatttagtataaaatgttgccaaatagctgctat 33851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 3736992 - 3737038
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 102  Q
    ||||||||||||| | ||||||| |||||||||||||| ||||||||    
T  3736992 aatttgaacaaattgttattgttctgcgatatgctattcagtacaaa 3737038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 26494408 - 26494466
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    ||||||||| ||| ||||||||| ||| ||  ||||||||||||||| |||||||||||    
T  26494408 aatttgaactaattgctattgttctgcaattcgctatttagtacaaactgttgtcaaat 26494466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 31322632 - 31322702
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 112  Q
    ||||||||||||| ||||||||||||| | |||| || || ||||  ||||||  ||||||||||||||||    
T  31322632 ctatagcgtagtggaatttgaacaaattgttattattctgtgatacactatttcttacaaaatgttgtcaa 31322702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 31694797 - 31694723
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||| |||||||| |||||  |||||  ||||||||| || ||||  ||||||||||||||||||| ||||||||    
T  31694797 ctatggcgtagtggaatttagacaaactgctattgttctgtgatacactatttagtacaaaatgttttcaaatag 31694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 33386192 - 33386254
Alignment:
Q  90 tatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 152  Q
    ||||| || ||||||||||| |||||||  |||||| |||||||||| |||||||| ||||||    
T  33386192 tatttggttcaaaatgttgtgaaatagcctctatagtggcgctataaaactattgtgtagcgg 33386254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 2496383 - 2496447
Alignment:
Q  13 aatattgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgtt 78  Q
    |||||||| |||||||||||||  ||| ||||| || ||||| ||||||||||||||||| |||||    
T  2496383 aatattgtcaaatagcggcgttgcagc-actatggcttagtggaatttgaacaaatcgctgttgtt 2496447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 4354371 - 4354338
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagcta 122  Q
    ||||||||||||||||||||| ||||||||||||    
T  4354371 ctatttagtacaaaatgttgtaaaatagcagcta 4354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 9075206 - 9075271
Alignment:
Q  90 tatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    |||| ||||||||||||||||||||||  | ||||| |||||||||  ||| ||||||| ||||||    
T  9075206 tattaagtacaaaatgttgtcaaatagaggttatagcggcgctatagcactgttgtataacggaat 9075271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 29405008 - 29404955
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgtt 107  Q
    |||||||||| |||| ||||||||||  ||||||| ||||||||||||| ||||    
T  29405008 gaaatttgaaaaaattgctattgtttcacgatatgttatttagtacaaagtgtt 29404955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 32392406 - 32392369
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  32392406 gctatttagtacaaagtattgtcaaatagcagctatag 32392369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 24769309 - 24769369
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||||  ||||||| ||| |||  |||||||||||||| | |||||||||||    
T  24769309 aatttgaacaaatcattattgttctgcaatacactatttagtacaaagtattgtcaaatag 24769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 15606404 - 15606321
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||| | ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  15606404 ctatagcattgtgaaatttaaacaaatcactattgttctgctatatgctatttagtacaaaatgttgtcaaataacagctatag 15606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 7347693 - 7347777
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatact 140  Q
    ||||||||||||| ||||||||||||| |||  |||||||||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  7347693 aatttgaacaaattgctattgttttgcaatacactatttagtacaaaatattgtgaaatagcggctatagaggcgctatagtact 7347777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 6026031 - 6025952
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||  |||||||  ||||||||    
T  6026031 aatttgaacaaatagttattgttccgcgatatgctatttagtacaaaatgttgtcaaatagtggctatagcagcgctata 6025952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 17473136 - 17473206
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||| ||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  17473136 gaaatttaaacaaaatgctattgttttgcaatatgctatttagtacaaaatattgtcaaatagccgctata 17473206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 52517141 - 52517064
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||| |||||| ||||||||| ||| |||||| ||||| |||||| ||||||||||||||| ||||||||||||    
T  52517141 cactatagagtagtggaatttgaactaattgctattattttgtgatatgttatttagtacaaaatattgtcaaatagc 52517064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 30882449 - 30882515
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||    
T  30882449 tagtggaatttgaacaaatcactattgttttgcgatatgcta-ttagtacaaaatgacgtcaaatagc 30882515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 44417783 - 44417857
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||  |||||||||||| || |||||||||| |||||| |||||||| |||| |||||||||||||    
T  44417783 ctatagcgtagtagaatttgaacaaaccgttattgttttgggatatgttatttagtgcaaagtgttgtcaaatag 44417857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 43391595 - 43391470
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    |||||||||||||||||||||||   ||||   |||||||||||||||||||||||||| || |||||||    ||||||  ||| ||| ||||| |||     
T  43391595 aatttgaacaaatcgctattgttccccgatgcactatttagtacaaaatgttgtcaaatggcggctatagcattgctatagcactgttgcatagcagaac 43391496  T
Q  156 tcaaacaaactactatcttctgcgat 181  Q
    ||||||||||| |||| || ||||||    
T  43391495 tcaaacaaactgctattttttgcgat 43391470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 47848050 - 47847982
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||||||||||   |||||||| |||| |||||||||||||||||||||| |||||||    
T  47848050 aatttgaacaaatcgctattgttccacgatatgccattt-gtacaaaatgttgtcaaatagcggctatag 47847982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 3240482 - 3240548
Alignment:
Q  59 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||| |||||||||||||||| |||||||| || | |||||||||||||||  |||||||    
T  3240482 ttgaacaaatcactattgttttgcgatacgctatttattaaacaatgttgtcaaatagaggctatag 3240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 15794004 - 15794165
Alignment:
Q  17 ttgttaaatagcggcgttatagc--cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    |||||||||||||||  ||||||  | |||||||| |||| |||||||||| |||  | ||||| || |||| |||||||||||||||||| |||| | |    
T  15794004 ttgttaaatagcggc--tatagcagcgctatagcgcagtggaatttgaacagatcatttttgttctgagatacgctatttagtacaaaatgctgtc-agt 15794100  T
Q  115 agcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctgcg 179  Q
     |  ||||||  |||||||||  |||||||| ||| ||||||||||||||  ||||| |||||||    
T  15794101 cggtgctataacggcgctatagcactattgtgtagtggaattcaaacaaatcactattttctgcg 15794165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 15955893 - 15955961
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||||||||||| | ||||| || ||||  |||||||| ||||||||||||||||||||| |||||    
T  15955893 aatttgaacaaatcgttcttgttatgtgatacactatttaggacaaaatgttgtcaaatagcatctata 15955961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 32868272 - 32868328
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    ||||||||||||||||||||| ||| |||| ||||||||| |||| |||||||||||    
T  32868272 tttgaacaaatcgctattgttctgcaatatactatttagtgcaaattgttgtcaaat 32868328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 33651660 - 33651715
Alignment:
Q  61 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||| ||||||| | | ||||||||||||||| |||||||||||||||||    
T  33651660 gaacaaatcgttattgttctacaatatgctatttagtataaaatgttgtcaaatag 33651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 15592737 - 15592675
Alignment:
Q  63 acaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||| || ||||||||| ||||||||||| ||  |||||||||||||||||| |||||||    
T  15592737 acaaatcactcttgttttgcaatatgctatttggtgtaaaatgttgtcaaatagcggctatag 15592675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 26161637 - 26161587
Alignment:
Q  85 tatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||||||||||| | ||||||||||||||||||||  ||||||||    
T  26161637 tatgctatttagtacaaagtattgtcaaatagcagctatagccgcgctata 26161587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 3950673 - 3950742
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||| ||||||||  |||||| |||||||||||| ||||  ||| ||||||| |||||||    
T  3950673 aatttgaacaaatcactattgttccgcgatacgctatttagtaccaaataatgtgaaatagctgctatag 3950742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 7991516 - 7991597
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||||||| | ||||||||  | |||| || |||||||||| ||| |||| |||||||||||| || |||||||||    
T  7991516 gaaatttgaacaaaccactattgttccgtgatacgccatttagtacataatattgtgaaatagcagctagagtggcgctata 7991597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 15923827 - 15923758
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||| |||||||||||||||| ||||  |||||| |||| || |||||| | |||||||||||||    
T  15923827 aatttgaactaatcgctattgttttgtgatacactattttgtacgaagtgttgttagatagcagctatag 15923758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 26360401 - 26360296
Alignment:
Q  39 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataata 138  Q
    |||||||| ||| ||| |||||| ||||| ||| ||||||   || ||| ||||||||||||||||| | |||||||||  |||||| |||| |||| ||    
T  26360401 ccactataacgtggtggaatttggacaaaccgcaattgttccccggtatactatttagtacaaaatgctatcaaatagcgactatagtggcgatatagta 26360302  T
Q  139 ctattg 144  Q
    ||||||    
T  26360301 ctattg 26360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 32721421 - 32721482
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||| |||||||| | |||||||||||||    |||||||||||||||||||||||||||||    
T  32721421 aattcgaacaaattgttattgttttgcgaagcactatttagtacaaaatgttgtcaaatagc 32721482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 11766237 - 11766188
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgtt 107  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||| ||||    
T  11766237 aatttgaacaaatagctattgtttt--gatatgctatttagtacaaagtgtt 11766188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 12764017 - 12764101
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatact 140  Q
    ||||| |||||||  |||||||| ||| |||||||||||| ||| || ||||  |||||||| ||||||| ||||||||| ||||    
T  12764017 aattttaacaaattactattgttctgcaatatgctatttaatacgaagtgtttccaaatagcggctatagtggcgctatagtact 12764101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 28067473 - 28067557
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||||| ||| | |||||||  ||||| || ||||||||||||||| ||||| ||| ||||| ||||| ||| |||||||||    
T  28067473 cactatagcataggggaatttgatgaaatcactgttgttttgcgatatgttatttggtataaaatattgtcgaattgcagctata 28067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 400901 - 400972
Alignment:
Q  62 aacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgcta 133  Q
    |||||||| | |||||| |||||||| | |||||||||||| | ||||||||||| || ||||| |||||||    
T  400901 aacaaatcaccattgttctgcgatatacaatttagtacaaagtattgtcaaatagaagttatagtggcgcta 400972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 11049047 - 11049122
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||| |||||||||||||||||| || |   |||||  |||| ||||||||||| || |||||||||||||||||    
T  11049047 tagtggaatttgaacaaatcgctactgctccacgatacactatctagtacaaaatcttatcaaatagcagctatag 11049122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 46331156 - 46331109
Alignment:
Q  70 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  46331156 gctattgttttatgatatgctattaagtacaaaatggtgtcaaatagc 46331109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 3335145 - 3335211
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagcta 122  Q
    |||||||||||||| ||||||||  |||| |  || ||||||| ||| |||||||||||||||||||    
T  3335145 aatttgaacaaatcactattgttccgcgacaccctgtttagtataaagtgttgtcaaatagcagcta 3335211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 4541583 - 4541638
Alignment:
Q  59 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||| ||||||||||| ||||||||||| ||||  | |||||||||||||    
T  4541583 ttgaacaaatcgttattgttttgcaatatgctatttggtac--agtgttgtcaaatag 4541638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 15190855 - 15190929
Alignment:
Q  43 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||| ||| | ||||| || |||| ||||||||| | |||||  ||||| |||||||||||||||||||||||    
T  15190855 tatagcctagcggaatttaaagaaattgctattgttctacgatacactattcagtacaaaatgttgtcaaatagc 15190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 15365009 - 15364936
Alignment:
Q  59 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||| |||||||||||| ||||   || |||||||||| |||||| ||||||| |||||| |||| |||||    
T  15365009 ttgaacaaattgctattgttttgtgata---tacttagtacaaagtgttgttaaatagcggctatacaggcactata 15364936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 19392212 - 19392262
Alignment:
Q  69 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 119  Q
    |||||||||||  |||||| ||||| |||||||||| ||||||||||||||    
T  19392212 cgctattgtttcacgatatactattaagtacaaaatattgtcaaatagcag 19392262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 50322030 - 50322108
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    |||| ||||| |||||||||||| | |||||||| | |||||  | |||||||| ||||| ||||||||| ||||||||    
T  50322030 tagcatagtggaatttgaacaaaccactattgttctacgatacacaatttagtataaaatattgtcaaattgcagctat 50322108  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 14643262 - 14643201
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||||||| || ||||||  |||||| ||||||||||| || ||||| |||||||||    
T  14643262 aatttgaacaaattgccattgttcagcgatacgctatttagtagaagatgttttcaaatagc 14643201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 15956878 - 15956935
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    ||||||||||||| | |||||||  || ||| ||||||||||||||| ||||||||||    
T  15956878 aatttgaacaaattgttattgttccgccatacgctatttagtacaaagtgttgtcaaa 15956935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 1880137 - 1880082
Alignment:
Q  61 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||| ||||||||| || ||||  ||||| |||||||||||||||||||||||    
T  1880137 gaacaaattgctattgttatgtgatactctatt-agtacaaaatgttgtcaaatagc 1880082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 46937570 - 46937630
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||  |||||||||  |||||  ||||||||||||||||| |||| ||||||    
T  46937570 aatttgaacaaagtgctattgttccgcgatgcgctatttagtacaaaatattgtgaaatag 46937630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 48432703 - 48432631
Alignment:
Q  41 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    ||||||||||||   |||||| ||| | | |||||||||||  ||| ||||||||||||| ||||||||||||    
T  48432703 actatagcgtagcagaatttggacacaccactattgttttgtaatacgctatttagtacacaatgttgtcaaa 48432631  T

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Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 7246026 - 7245942
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||| ||| ||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  7246026 cactataccgtggtggaatttaaacaaatcgctattcttttgcgatacgctatttagtacaaagtgttgtcaaatagcggctata 7245942  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 6894386 - 6894305
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||||||||| ||||||||||||| ||||||||||  | |||  ||||| ||||||||||||||||||||| |||||||    
T  6894386 ctatagcgtagtggaatttgaacaaattgctattgtttaacaatacactattaagtacaaaatgttgtcaaataacagctat 6894305  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 1110471 - 1110401
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||||||||||| |||||||||| | ||||||||||||||| | || ||||||||||||||| |||||    
T  1110471 gaaatttgaacaaattgctattgtttcgggatatgctatttagttctaagtgttgtcaaatagcaactata 1110401  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 38774381 - 38774312
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||  ||||||||||||||| |||||||    
T  38774381 aatttgaacaaatcactattgttcagcgttatgctatttagtacatcatgttgtcaaatagcggctatag 38774312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 24942499 - 24942574
Alignment:
Q  60 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||| ||||||||||||    |||| |||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  24942499 tgaacagatcgctattgttccatgatacgctaattagtacaaaatgttgtcaaatagcagctgtagcggcgctata 24942574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 2219599 - 2219525
Alignment:
Q  43 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||| |||||  |||||||||| |||| ||||||| |  |||||||||||||||||||||| ||||||||||||    
T  2219599 tatagtgtagtagaatttgaacatatcgttattgttctctgatatgctatttagtacaaaatattgtcaaatagc 2219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 30900173 - 30900051
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||||||| |||| ||||||  ||||| | || |||||| |||| ||  ||||||||||    
T  30900173 aatttgaacgaatcgctattgttcagcgatacactatttagtacaaaatattgtgaaatagtggctatcgcggtgctatagtactgttacatagcggaat 30900074  T
Q  156 tcaaacaaactactatcttctgc 178  Q
    |  | ||||| ||||| ||||||    
T  30900073 ttgagcaaaccactattttctgc 30900051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 39417762 - 39417816
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtc 110  Q
    |||||||||||||| ||||||||  |||||||||||| |||||||||||||||||    
T  39417762 aatttgaacaaatcactattgttccgcgatatgctatatagtacaaaatgttgtc 39417816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 23747323 - 23747392
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||| ||||  ||||||||    
T  23747323 aatttgaacaaatagctattgttctgtgatatgctagttagtacaaactgttgtcgaataatagctatag 23747392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 38921262 - 38921362
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    |||||||||||||| || ||||| |||||||| ||||||||| |||||| |||| || ||| ||||| || |||||||||  | | |||| |||||||||    
T  38921262 aatttgaacaaatcactgttgttctgcgatatactatttagtgcaaaatattgtgaagtagtagctacagtggcgctatagcattgttgtgtagcggaat 38921361  T
Q  156 t 156  Q
    |    
T  38921362 t 38921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 1109412 - 1109354
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 112  Q
    |||||||||||||||| | ||||||  ||||||  ||||||||||||||||||||||||    
T  1109412 gaaatttgaacaaatccccattgttccgcgatacactatttagtacaaaatgttgtcaa 1109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 13380906 - 13380968
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagca 118  Q
    ||||||||||||| |||| |||| ||| ||  |||||||||||||||||||||||||| ||||    
T  13380906 aatttgaacaaattgctactgttctgctatccgctatttagtacaaaatgttgtcaaacagca 13380968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 21451571 - 21451517
Alignment:
Q  70 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||||| ||||||| || |||||||||||||| |||||||||||| ||||||    
T  21451571 gctattgttctgcgatacgcaatttagtacaaaatcttgtcaaatagcggctata 21451517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 23218681 - 23218571
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    |||||| ||||||||  |||||| |  |||| |||||||| ||||||||||||||||||||||  ||||  |||||||||  |||  || ||| ||||||    
T  23218681 aatttggacaaatcgtcattgttctatgatacgctatttaatacaaaatgttgtcaaatagcaaatataatggcgctatagcactgctgcataacggaat 23218582  T
Q  156 tcaaacaaact 166  Q
    | |||||||||    
T  23218581 ttaaacaaact 23218571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 400676 - 400623
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctattta 95  Q
    ||||| ||||||| ||||||||||||||||||||| | ||| ||||||||||||    
T  400676 ctatatcgtagtggaatttgaacaaatcgctattgctatgcaatatgctattta 400623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 5260422 - 5260459
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  5260422 gctatttagtacaaaatattgtcaaatagcagctatag 5260459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 21451016 - 21450959
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| | ||||||||    
T  21451016 aatttgaacaaatcactattgttctggaatatgctatttagtacaaactattgtcaaa 21450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 8095907 - 8095955
Alignment:
Q  71 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 119  Q
    ||||||| ||||||||  |||||||||||||||||||||| ||||||||    
T  8095907 ctattgtgttgcgatacactatttagtacaaaatgttgtcgaatagcag 8095955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 23117420 - 23117360
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||||||| ||    |||||||||||||| |||||||||||| ||||||    
T  23117420 aatttgaacaaatcgctatttttccatgatatgctatttagcacaaaatgttgtgaaatag 23117360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 44124546 - 44124610
Alignment:
Q  71 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||| |||||||  |||||||||||| ||| |||||||||||| | ||||| |||||||||    
T  44124546 ctattgttctgcgatacactatttagtacagaatattgtcaaatagctgatatagcggcgctata 44124610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 1662703 - 1662624
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||||||  ||||||| ||||||  ||||||||||  ||||||||||||||| |   |||||||||| |||||    
T  1662703 aatttgaacaaatcattattgttctgcgatgcgctatttagtgaaaaatgttgtcaaatggtgactatagaggcactata 1662624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 10455094 - 10455141
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||||||||| ||||||||| || ||||||| |||||||||    
T  10455094 gctatttagtacaaaattttgtcaaattgcggctatagtggcgctata 10455141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 24673451 - 24673364
Alignment:
Q  90 tatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctg 177  Q
    |||| ||||||||||||||||||||||| ||||||| ||| | |||  ||| ||| ||||| |||||  ||||||| ||||| |||||    
T  24673451 tattcagtacaaaatgttgtcaaatagccgctatagcggcaccatatcactgttgcatagctgaatttgaacaaaccactattttctg 24673364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 33007955 - 33007893
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||||||||| ||||||| ||  |||||| |||||| || |||||||||||||||||||||||    
T  33007955 atttgaacaaaccgctattattccgcgataagctatt-agcacaaaatgttgtcaaatagcagc 33007893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 37233722 - 37233781
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||| || | |||||||   ||||| |||||||||||||||||||||||||||||    
T  37233722 tttgaacaattcacaattgtttcaggatatcctatttagtacaaaatgttgtcaaatagc 37233781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 38622954 - 38622871
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||   |||||||| |||||| |||||||    ||||  |||||||| |||||||||||||||||||| |||||||    
T  38622954 ctatagcgtagcagaatttgaataaatcgatattgttccatgatacactatttagcacaaaatgttgtcaaatagcggctatag 38622871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 7982415 - 7982345
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 112  Q
    ||||||| ||||| ||||||||||||| |||||||||||| ||||  ||||| | | |||| |||||||||    
T  7982415 ctatagcatagtggaatttgaacaaattgctattgttttgtgatacactattcactgcaaattgttgtcaa 7982345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 21343752 - 21343694
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtaca 100  Q
    ||||||||||| | ||| |||||||||| || |||||||||||||  ||||||||||||    
T  21343752 ctatagcgtagaggaatatgaacaaatcactgttgttttgcgatacactatttagtaca 21343694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 25268805 - 25268875
Alignment:
Q  43 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    ||||||||||   ||||||||||||||| ||||||| ||| |||  |||||||||| ||||| ||||||||    
T  25268805 tatagcgtagcagaatttgaacaaatcgttattgttctgctatacactatttagtataaaatattgtcaaa 25268875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 30885363 - 30885321
Alignment:
Q  74 ttgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||| ||||||||||||||||||||||||  |||||||||||    
T  30885363 ttgttctgcgatatgctatttagtacaaaacattgtcaaatag 30885321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 33581726 - 33581808
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 136  Q
    |||||||||||||||| | ||||||  | |||| |||||||  ||||| ||||||||||||||| || |||| || |||||||    
T  33581726 gaaatttgaacaaatcaccattgttacgggatacgctatttgatacaatatgttgtcaaatagcggccatagtggtgctataa 33581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 40869581 - 40869547
Alignment:
Q  90 tatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||||||||||||||||||||| ||||||    
T  40869581 tatttagtacaaaatgttgtcaaatagcggctata 40869547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 30408321 - 30408257
Alignment:
Q  49 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    |||| ||||||||||||| | |||||||||| | ||||| ||| ||||||||||||||| ||||||    
T  30408321 gtagcgaaatttgaacaagtggctattgttt-gtgatattctaattagtacaaaatgttttcaaat 30408257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 31838837 - 31838929
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||| ||||| | ||| |||||||  |||||||| ||| ||||| ||||||||||||| ||||||  |||||||||| ||| || ||||||    
T  31838837 ctatagcatagtggagttttaacaaatttctattgttctgcaatatg-tatttagtacaaattgttgttcaatagcagctctagtggtgctata 31838929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 32231762 - 32231823
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||| ||| |||| || |||||| ||||||| ||||||| |||| |||||||    
T  32231762 aatttgaacaaatctctagtgttctgtgatatgttatttagcacaaaatattgtgaaatagc 32231823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 32888963 - 32889016
Alignment:
Q  83 gatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 136  Q
    |||||||||||||||||||| | |||||||||||  ||||| | ||||||||||    
T  32888963 gatatgctatttagtacaaagtattgtcaaatagtggctattgcggcgctataa 32889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 34925345 - 34925312
Alignment:
Q  92 tttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||||||||||||| |||||||    
T  34925345 tttagtacaaaatgttgtcaaatagcggctatag 34925312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 25314104 - 25314032
Alignment:
Q  43 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    |||||| ||| | ||||||||||||||| ||||||| || ||||  |||||| ||||||| |||||| |||||    
T  25314104 tatagcatagaggaatttgaacaaatcgttattgttctgtgatacactatttggtacaaagtgttgttaaata 25314032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 11257714 - 11257789
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||| |||| | ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  11257714 ctatagtgtagcggaatatgaacaaatcgctattgttatacgatatgctatttagtacaaaatgttgtcaaatagc 11257789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 21047136 - 21047059
Alignment:
Q  48 cgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||  ||||| ||||||||  | |||||||||||||||| |||||||||||||||| | |||||||    
T  21047136 cgtagtgaaatttgataaaatcactattgttccgtgatatgctatttagtaaaaaatgttgtcaaataacggctatag 21047059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 39647188 - 39647139
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatg 105  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39647188 aatttgaacaaatcgttattgttctgcgatatgctatttagtacaaaatg 39647139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 7430118 - 7430218
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    |||||| ||||| ||||||||||   | ||| |||||||||||||| ||||||||||||||| ||||| |  ||||||||| |||| ||| |||||||||    
T  7430118 aatttggacaaaccgctattgttccacaatacgctatttagtacaagatgttgtcaaatagcggctattgtagcgctataacactactgtgtagcggaat 7430217  T
Q  156 t 156  Q
    |    
T  7430218 t 7430218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 27731654 - 27731590
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||| |||||| |||||||||||  ||||||||||||||||||||| | |||||||||||||||    
T  27731654 aatttaaacaaaccgctattgtttaccgatatgctatttagtacaaagttttgtcaaatagcagc 27731590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 39159810 - 39159727
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||| | ||||| |||||| | |||||||| || ||||||| ||||||||||||  |||| ||||||||||||||||    
T  39159810 ctatagcgtagcggaattttaacaaaccactattgttctgtgatatgcaatttagtacaaagcgttgacaaatagcagctatag 39159727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 16973905 - 16973824
Alignment:
Q  44 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||| | ||||  |||||||| ||||||||  |||||| | | ||||||||||||| ||||||||||||||||||||    
T  16973905 atagcgtagaggaattcaaacaaatcactattgttccgcgatacgttgtttagtacaaaattttgtcaaatagcagctatag 16973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 34156643 - 34156783
Alignment:
Q  43 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactat 142  Q
    ||||||||||   ||||||||| ||||||| ||| |  | |||| |||||||||| ||||||||||| |||||||| |||||   | ||||||  ||| |    
T  34156643 tatagcgtagcagaatttgaactaatcgcttttgctccgtgatacgctatttagtgcaaaatgttgttaaatagcaactatatttgtgctatagcactgt 34156742  T
Q  143 tgtatagcggaattcaaacaaactactatcttctgcgattg 183  Q
    || ||||| |||||  |||||||  ||||||||||||||||    
T  34156743 tgcatagcagaatttgaacaaacagctatcttctgcgattg 34156783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 41894417 - 41894481
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||||||||||| | ||||||| ||| ||| |||||||| |||||| |||||||||||||||||    
T  41894417 aatttgaacaaattgttattgttctgcaatacgctatttactacaaagtgttgtcaaatagcagc 41894481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 40678061 - 40677960
Alignment:
Q  22 aaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagct 121  Q
    ||||||||||| |||||| | |||| | ||| | ||||||||||||  |  |||||| |||||| |||| |||||||||||| ||||||||||||| |||    
T  40678061 aaatagcggcgctatagc-attataacttagcggaatttgaacaaactggaattgttctgcgatgtgctgtttagtacaaaaagttgtcaaatagcggct 40677963  T
Q  122 ata 124  Q
    |||    
T  40677962 ata 40677960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 41015065 - 41015003
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||  |||||||||  | |||||||||||||||||||| |||||||| |||||    
T  41015065 aaatttgaacaaactgctattgttccgtgatatgctatttagtacaaagtgttgtcatatagc 41015003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 6202589 - 6202658
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||| ||||||||||||||| | || |||||||||||||||||||||   ||| |||||||||| ||||    
T  6202589 aattttaacaaatcgctattgctatgtgatatgctatttagtacaaaacaatgtgaaatagcagccatag 6202658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 6586482 - 6586627
Alignment:
Q  17 ttgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||  |||||| |||||||| ||||| |  || ||||||||||||||||    | ||||| |||||||| |||||| |||||||| ||    
T  6586482 ttgttaaatagcggc--tatagc-actatagcatagtggatattcaacaaatcgctattgtcccacaatatggtatttagtgcaaaatattgtcaaacag 6586578  T
Q  117 cagctatagaggcgctataatactattgtatagcggaattcaaacaaac 165  Q
    | | ||||| | |||||||  ||||||| |||| ||||||  |||||||    
T  6586579 cggttatagtgccgctatagaactattgcatagaggaatttgaacaaac 6586627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 33342728 - 33342789
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||| |||||||||||||| |||||||  ||||| |||||||| | ||||||||||||    
T  33342728 aatttgaataaatcgctattgttatgcgatacactattaagtacaaagtattgtcaaatagc 33342789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 41991173 - 41991254
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||| ||||| ||||| ||||||||| |||| || ||| ||| || |||||||||||| ||||||  ||||||||||||    
T  41991173 ctatagcatagtggaatttaaacaaatcgatattattctgctatacgcaatttagtacaaagtgttgtttaatagcagctat 41991254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 43283491 - 43283418
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    ||||||||| ||| | ||||||||||||||||| |||||  || ||| ||||||| | ||||||||||||||||    
T  43283491 cactatagcatagcgtaatttgaacaaatcgctgttgttccgcaatacgctatttgggacaaaatgttgtcaaa 43283418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 181
Target Start/End: Original strand, 9446286 - 9446400
Alignment:
Q  70 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata---gaggcgctataatactattgtatagcggaattcaaacaaact 166  Q
    ||||||||| ||| ||||||||||||||||||||| || | ||||||| ||||||   | || ||||||  ||| |||| ||||||||||  | ||||||    
T  9446286 gctattgttatgcaatatgctatttagtacaaaatattatgaaatagcggctatagtggtggtgctatagcactgttgtgtagcggaatttgagcaaact 9446385  T
Q  167 actatcttctgcgat 181  Q
     |||| |||||||||    
T  9446386 gctattttctgcgat 9446400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 31029562 - 31029638
Alignment:
Q  41 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||| ||| ||||||||| |||||| || ||||| ||||||||  || || ||||||| ||||||||||||||    
T  31029562 actatagcttagagaaatttgatcaaatcactgttgttctgcgatatattactttgtacaaagtgttgtcaaatagc 31029638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 40990949 - 40991017
Alignment:
Q  48 cgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||| |||||  ||||| ||||||| || || || | |||||||||||||||||||||||||||||    
T  40990949 cgtagtggaatttagacaaaccgctattcttctgtgacacgctatttagtacaaaatgttgtcaaatag 40991017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 8977426 - 8977485
Alignment:
Q  17 ttgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttt 79  Q
    |||||||||||||||  |||||| |||||||||||| |||||||||||||||| ||| |||||    
T  8977426 ttgttaaatagcggc--tatagc-actatagcgtagcgaaatttgaacaaatcactagtgttt 8977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 16033019 - 16033090
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    ||||||||||  | |||||||||||||| || |||||  || ||| |||| |||||||||||||||||||||    
T  16033019 ctatagcgtatcggaatttgaacaaatctcttttgttacgcaatacgctacttagtacaaaatgttgtcaaa 16033090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 29466168 - 29466250
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||| | |||| |||||||||| ||| | || |||||| ||||||||||||||||||||||  ||||||||| ||| |||||    
T  29466168 ctatagtggagtggaatttgaacatatcaccatcgttttgtgatatgctatttagtacaaaat-atgtcaaataacagttatag 29466250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 17855226 - 17855260
Alignment:
Q  81 gcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    |||||||||| ||||||||||||||||||||||||    
T  17855226 gcgatatgctttttagtacaaaatgttgtcaaata 17855260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 18551549 - 18551479
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctataga 126  Q
    ||||| ||||||  |||||||||| | ||||||| |||||||||||| |||||||| |||||  |||||||    
T  18551549 aattttaacaaacagctattgtttcgagatatgcaatttagtacaaagtgttgtcatatagcgtctataga 18551479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 18839223 - 18839185
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgtt 78  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  18839223 cactatagcgtagtgatatttgaacaaatagctattgtt 18839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 19115160 - 19115099
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||| || ||| |||||| || ||||| |||||||||||||| ||||||||||||    
T  19115160 gaaatttgaacagattgctgttgttt-gcaatatgatatttagtacaaaacgttgtcaaatag 19115099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 20981270 - 20981328
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    ||||||||| |||| |||||||| ||| ||| ||||||||||| ||||| |||||||||    
T  20981270 aatttgaactaatcactattgttctgcaatacgctatttagtataaaatattgtcaaat 20981328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 40213951 - 40213882
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||| ||||||||||| ||||||||  || ||| ||||| ||||||||||||||||||||| | |||||||    
T  40213951 gaaaattgaacaaatcactattgttc-gcaatacgctatgtagtacaaaatgttgtcaaatggtagctata 40213882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 41376402 - 41376333
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||| ||  | ||||||||||||||||||| ||||||||| |  |||| |||||||||||||||    
T  41376402 aaatttgaacatatgtccattgttttgcgatatgcta-ttagtacaacacattgtgaaatagcagctatag 41376333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 85
Target Start/End: Complemental strand, 1792139 - 1792110
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgat 85  Q
    ||||||||||||||||||||||||||||||    
T  1792139 aatttgaacaaatcgctattgttttgcgat 1792110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 7477621 - 7477556
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    ||||| ||||| || ||||| ||||||||  ||||| | |||||||||||||| ||||||||||||    
T  7477621 tagtggaattttaataaatcactattgttccgcgatttactatttagtacaaagtgttgtcaaata 7477556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 14956762 - 14956693
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||| ||||| || || ||||| |||||||| || |  ||||||||||||||| ||||||    
T  14956762 aatttgaacaaatcactattattctgtgatattctatttagcactatgtgttgtcaaatagcatctatag 14956693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 38346862 - 38346923
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||| || || |||||||| || ||||  ||||||| |||||||||||||||||||||    
T  38346862 aatttgaaaaagtcactattgttctgtgatacactatttactacaaaatgttgtcaaatagc 38346923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 39647296 - 39647243
Alignment:
Q  49 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 102  Q
    |||||| |||||||| |||||| ||||||| ||||||||||| ||||| |||||    
T  39647296 gtagtggaatttgaataaatcgttattgttctgcgatatgctgtttagcacaaa 39647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 631527 - 631483
Alignment:
Q  81 gcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||| ||||||||||||||||| |||||| ||||| |||||||    
T  631527 gcgatacgctatttagtacaaaatattgtcatatagcggctatag 631483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 4787945 - 4788021
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaaac 165  Q
    ||||||||||||||||||||||||||||  |||| | |||| |||||  ||| || |||| |||||||  |||||||    
T  4787945 ctatttagtacaaaatgttgtcaaatagtggctacacaggcactatagcactgttttatatcggaatttgaacaaac 4788021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 13996410 - 13996378
Alignment:
Q  81 gcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    |||||| ||||||||||||||||||||||||||    
T  13996410 gcgatacgctatttagtacaaaatgttgtcaaa 13996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 34452045 - 34451993
Alignment:
Q  70 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagcta 122  Q
    |||||||||| ||||||||| |||||||||||| | |||| ||||| ||||||    
T  34452045 gctattgtttagcgatatgcaatttagtacaaagtattgtaaaatatcagcta 34451993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 37056370 - 37056430
Alignment:
Q  59 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 119  Q
    |||||||||| |||||||||  | | || ||| |||||||| |||||||||||||||||||    
T  37056370 ttgaacaaattgctattgttccgtggtacgctgtttagtacgaaatgttgtcaaatagcag 37056430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 117
Target Start/End: Complemental strand, 41399598 - 41399570
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||||||||||||||||||    
T  41399598 ctatttagtacaaaatgttgtcaaatagc 41399570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 27317996 - 27318081
Alignment:
Q  78 tttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaa 163  Q
    ||||| ||||||||||||||| |||||| ||||||||||| ||||||| |||||||||  |||||||  |||||||||| ||||||    
T  27317996 tttgctatatgctatttagtaaaaaatgctgtcaaatagcggctatagtggcgctatataactattgcctagcggaatttaaacaa 27318081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 33958230 - 33958297
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 112  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||||| | ||||||||||||||||    
T  33958230 tagcgtagtggaatttgaacaactcgctattgttctgcaatatgctattgaatacaaaatgttgtcaa 33958297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 26174925 - 26174994
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||| ||||||||| |||||||  |||||||||| || |||||||||||||||||||||||    
T  26174925 aaatttgaacaaat-gctattgttctgcgatacactatttagtataatatgttgtcaaatagcagctatag 26174994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 11530027 - 11530108
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||| ||| |||| ||||||| ||||||| ||| |||||    
T  11530027 gaaatttgaacaaatcactattgttctgcgatacactatttagtacataatattgtgaaatagcggctatagtggcactata 11530108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 41631944 - 41631885
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||| |||||||||||| ||||||||||||||||| || ||||||| |||||    
T  41631944 atttgaacaaattgctattgttttgtgatatgctatttagtacgaagtgttgtcgaatag 41631885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 42616798 - 42616723
Alignment:
Q  60 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||| | |||||||||||||||   |||||||||||||| |||||||||||||||| ||||| ||| |||||    
T  42616798 tgaacaaaccactattgttttgcgatccactatttagtacaaagtgttgtcaaatagcagttatagtggcactata 42616723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 17443035 - 17442941
Alignment:
Q  51 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgt 145  Q
    |||| ||||||||||||| |||||||||  |   || | |||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||    
T  17443035 agtggaatttgaacaaattgctattgttcagaattacgatatttagtgcaaaatgttgtgaaatagcatctatagtggcgctataaaactattgt 17442941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 44458305 - 44458225
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||||||| ||||| |||| ||||||| ||||||||||  ||||||   ||||||||||||| | |||||||||||||||    
T  44458305 cactatagcatagtggaattcgaacaaaccgctattgttccgcgatacaatatttagtacaaagtattgtcaaatagcagc 44458225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 4205011 - 4204949
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 119  Q
    |||||||| ||| ||||||||||  | |||||||||||||||| ||||||||||||||||||||    
T  4205011 aatttgaaaaaaccgctattgttccgtgatatgctatttagta-aaaatgttgtcaaatagcag 4204949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 18569435 - 18569490
Alignment:
Q  72 tattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagag 127  Q
    ||||||| || |||||||||||||||| ||| |||||||||||||| |||||||||    
T  18569435 tattgttctgtgatatgctatttagtataaagtgttgtcaaatagccgctatagag 18569490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 31790554 - 31790447
Alignment:
Q  49 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtata 148  Q
    ||||||||||||| |||||  ||||||||| ||| |||  |||||||||| |||||||||||| ||||  | ||||| |||||||||  | ||||| |||    
T  31790554 gtagtgaaatttggacaaacagctattgttctgccatacactatttagtataaaatgttgtcatatagtggatatagtggcgctatatcagtattgcata 31790455  T
Q  149 gcggaatt 156  Q
    || |||||    
T  31790454 gcagaatt 31790447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 39597568 - 39597639
Alignment:
Q  47 gcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagca 118  Q
    |||||| | ||||| || ||||||||||||||  |||||| ||||||||||||||||| |||| ||||||||    
T  39597568 gcgtagcggaatttaaataaatcgctattgttccgcgatacgctatttagtacaaaatattgtgaaatagca 39597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 20547165 - 20547095
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 112  Q
    |||||| || ||| |||||||| ||||||| |||||| ||| ||||||| ||||| |||||||||||||||    
T  20547165 ctatagggttgtggaatttgaagaaatcgccattgttctgcaatatgctctttagcacaaaatgttgtcaa 20547095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 2045133 - 2045047
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattg 144  Q
    |||||||||| |||| ||||||||||  |||  ||||||||||  |||| || ||||||||||||||||| ||| ||| ||||||||||    
T  2045133 aatttgaacacatcgttattgttttgttatacactatttagta--aaatattatcaaatagcagctatagtggctctaaaatactattg 2045047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 11328128 - 11328188
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctat--ttagtacaaaatgttgtcaaa 113  Q
    ||||||||||| ||||||||||| | || |||||||||  |||||||||||||||||||||    
T  11328128 aaatttgaacatatcgctattgtctcgcaatatgctattattagtacaaaatgttgtcaaa 11328188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 28044760 - 28044715
Alignment:
Q  71 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||    
T  28044760 ctattgttttgtgatatgcgatttagtacaaagtgttgtcaaatag 28044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 28804336 - 28804405
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||||||||||||||||    ||| ||||||||||||||| | |||||||||| | |||||||    
T  28804336 aatttgaacaaatcgctattgtttcagaataagctatttagtacaaagtattgtcaaataacggctatag 28804405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 32321501 - 32321542
Alignment:
Q  93 ttagtacaaaatgttgtcaaatagcagctatagaggcgctat 134  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  32321501 ttagtacaaaatgttgtcaaatagcagctatagcgccgctat 32321542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 33971657 - 33971706
Alignment:
Q  68 tcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||||| ||| |||| |||||||||||||| ||||||||||||||    
T  33971657 tcgctattgttatgcaatatcctatttagtacaaattgttgtcaaatagc 33971706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 3110568 - 3110516
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 141  Q
    ||||||||||||||  ||||||||||||  ||||||| |||||||||||||||    
T  3110568 ctatttagtacaaagcgttgtcaaatagtggctatagcggcgctataatacta 3110516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 20265605 - 20265521
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctataga 126  Q
    ||||||||||| | |||||| ||| | ||||| |||||||||||| || |||||||| | |||||||||| || || ||||||||    
T  20265605 ctatagcgtagcggaatttggacacaccgctaatgttttgcgatacgcaatttagtatacaatgttgtcacattgctgctataga 20265521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 29378509 - 29378577
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||||||||| | ||||||| ||||||| ||||||| ||||||| | ||||| |||||| ||||||    
T  29378509 aatttgaacaaattgatattgttctgcgatacgctattttgtacaaagtattgtctaatagcggctata 29378577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 29728763 - 29728827
Alignment:
Q  61 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||  |||||||||||||||| ||| || ||||||||| |||| ||||||||| |||||||    
T  29728763 gaacaaactgctattgttttgcgatttgcaatgtagtacaaagtgttctcaaatagcggctatag 29728827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 12749997 - 12750028
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||||||||||||||||||||||||||||||    
T  12749997 ctatttagtacaaaatgttgtcaaatagcagc 12750028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 16733773 - 16733711
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||| |||| ||||||||| ||||||  ||||||||||||| | |||| ||||||||    
T  16733773 gaaatttgaataaattgctattgttctgcgattcgctatttagtacacagtgttttcaaatag 16733711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 29415802 - 29415748
Alignment:
Q  62 aacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||| ||||||||| || |||||||  || ||||||||||||||||||||||    
T  29415802 aacaaattgctattgttctgtgatatgccgttcagtacaaaatgttgtcaaatag 29415748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 31235251 - 31235209
Alignment:
Q  82 cgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||| ||||||| |||| |||||||||||||||||||||    
T  31235251 cgatatgcaatttagttcaaagtgttgtcaaatagcagctata 31235209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 18104051 - 18104112
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||| |||||||||||||||||||  |||||  ||||| ||| |||||| ||||||||||||    
T  18104051 aattagaacaaatcgctattgtttcacgatacactattcagttcaaaatcttgtcaaatagc 18104112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 25694470 - 25694401
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||  |||||| ||| ||||||| |  ||| ||||||||||||||||||||||  |||||||    
T  25694470 aatttgaacaacccgctatcgttctgcgataagtgattcagtacaaaatgttgtcaaatagacgctatag 25694401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 44460364 - 44460393
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagca 118  Q
    ||||||||||||||||||||||||||||||    
T  44460364 ctatttagtacaaaatgttgtcaaatagca 44460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 31246993 - 31246953
Alignment:
Q  84 atatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||| ||||||| ||||||||||||||||||||| ||||    
T  31246993 atatgcaatttagttcaaaatgttgtcaaatagcagttata 31246953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 32562372 - 32562450
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||| ||||||||||| || |||||||  |||||||||||||  |||| ||||| ||| |||||| ||||||||||    
T  32562372 aaatttgaa-aaatcgctattattctgcgatacactatttagtacaagttgttatcaaacagc-gctataaaggcgctata 32562450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 33623735 - 33623675
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||| |||||||| ||||||||   | ||||||||||||||||||| |||||||| ||||    
T  33623735 aattttaacaaatcactattgttccactatatgctatttagtacaaagtgttgtcatatag 33623675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 35538104 - 35538056
Alignment:
Q  84 atatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgct 132  Q
    ||||||| |||| ||||||||||||||||||| | ||||||| ||||||    
T  35538104 atatgctctttaatacaaaatgttgtcaaataacggctatagcggcgct 35538056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 116
Target Start/End: Original strand, 36300414 - 36300442
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||||||||||||||||    
T  36300414 gctatttagtacaaaatgttgtcaaatag 36300442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 38475860 - 38475936
Alignment:
Q  49 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||| || |||||  |||||||||||||  |||||||||||| |||  |||| |||||| |||||| ||||||||    
T  38475860 gtagtggaacttgaatcaatcgctattgttccgcgatatgctatgtaggtcaaagtgttgttaaatagtagctatag 38475936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 42172865 - 42172801
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||||||||||||| | | ||| ||| ||| |||| | | ||||||||||||||||||||||||    
T  42172865 aatttgaacaaatcgttgtagttctgccatacgctagtaattacaaaatgttgtcaaatagcagc 42172801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 25252041 - 25252109
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||| |||||| | |||| ||||||||||||||||||||||| |||| |||||||||    
T  25252041 atttgaacaaatcgctcttgtttcgtgatacgctatttagtacaaaatgttgtctaataacagctatag 25252109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 32251078 - 32251006
Alignment:
Q  44 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||| ||||||||||||| |||||||||||| ||| ||| |||||||||||||||||| ||| ||||||    
T  32251078 atagcgtactgaaatttgaacacatcgctattgttatgcaataagctatttagtacaaaatgctgtgaaatag 32251006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 50402710 - 50402635
Alignment:
Q  60 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||| ||||||||  || ||||||||||||||| ||| ||||||||||||||||||||||  ||||||||    
T  50402710 tgaacaaatcactattgttccgcaatatgctatttagtataaagtgttgtcaaatagcagctatagctgcgctata 50402635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 43381176 - 43381245
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||| ||||||||||| ||  ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  43381176 aatttgaataaatcgctattattccgcgatatgcaatttaatacaaaatgttgtcaaatagaagctatag 43381245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 15802573 - 15802637
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    |||||||||||||||||||| ||  |||||||| ||| ||||||||| |||||||||||||||||    
T  15802573 aatttgaacaaatcgctattcttccgcgatatgttatatagtacaaagtgttgtcaaatagcagc 15802637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 38692510 - 38692427
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||| |||| | |||||||||||| ||||| |||||||| |||  | |||||||||||| |||||||||||||| |||||||    
T  38692510 ctatagggtagcggaatttgaacaaaccgctagtgttttgcaatacacgatttagtacaaagtgttgtcaaatagcggctatag 38692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 50251591 - 50251516
Alignment:
Q  81 gcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaatt 156  Q
    |||||||||||||||||| |||||||||||||||||| ||||||  ||||||| |  | |||||| ||||||||||    
T  50251591 gcgatatgctatttagtagaaaatgttgtcaaatagctgctataacggcgctaaagcattattgtgtagcggaatt 50251516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 53855791 - 53855744
Alignment:
Q  70 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  53855791 gctattgttctgcaatatgctatttagtacaaaatgttgtcaaatagc 53855744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 21754221 - 21754299
Alignment:
Q  39 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||  |||| |||||||  ||||||||||||||||  ||||||  |||||||||||||| ||||||||||||||    
T  21754221 ccactatattgtagcgaaatttagacaaatcgctattgttccgcgatacactatttagtacaaattgttgtcaaatagc 21754299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 25490545 - 25490602
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    |||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||    
T  25490545 tttgaacaaatcactattgatctgtgatatgatatttagtacaaaatgttgtcaaata 25490602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 14199985 - 14200053
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtc 110  Q
    ||||||| ||||| ||||||||||||  |||| |||| ||||||||||||||| ||||||| |||||||    
T  14199985 ctatagcttagtgtaatttgaacaaactgctaatgttctgcgatatgctatttggtacaaagtgttgtc 14200053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 48236363 - 48236287
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||| | ||| |||||||||||||||| || || ||| | |||||||||||||||  |||||||||||||||||    
T  48236363 cactataacatagcgaaatttgaacaaatcactgttatttcgggatatgctatttagtgtaaaatgttgtcaaatag 48236287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 10275894 - 10275819
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtac-aaaatgttgtcaaatag 116  Q
    ||||||| ||||| ||||||||||||||  | ||||| |||||||||||||||| ||| ||||| |||||||||||    
T  10275894 ctatagcatagtggaatttgaacaaatcattgttgttctgcgatatgctatttattacaaaaatattgtcaaatag 10275819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 2991045 - 2990983
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||  || |||||   ||||| |||||||||||||||||||||||||||||    
T  2991045 gaaatttgaacaaatttcttttgttccacgatacgctatttagtacaaaatgttgtcaaatag 2990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 6994327 - 6994393
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||| ||||| |||||| | |||||||| || |||||||||||||| ||| |||||||||||||||    
T  6994327 tagtggaatttaaacaaaacactattgttatgggatatgctatttagcacagaatgttgtcaaatag 6994393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 11338510 - 11338573
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctattta--gtacaaaatgttgtcaaatagc 117  Q
    |||||| |||| ||||| ||||| ||||||||||||||||   |||||||||||||||||||||    
T  11338510 aatttggacaagtcgctgttgttctgcgatatgctatttaatatacaaaatgttgtcaaatagc 11338573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 16169232 - 16169188
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaa 101  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||    
T  16169232 atttgaactaatcgctattgttctgcgatatgctattgagtacaa 16169188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 29279205 - 29279293
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctattt-agtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgt 145  Q
    |||||||||||| ||||||||| | |||||| ||||| | ||||  | ||||||||||||| ||||| | |||||||||| ||||||||    
T  29279205 tttgaacaaatcactattgtttcgtgatatgatattttaatacagcaagttgtcaaatagcggctatggcggcgctataacactattgt 29279293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 31386136 - 31386057
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 136  Q
    ||||||||||||| | || ||||||| |||| | |||||||| |||| |||||||||||| ||||||||||  ||||||||    
T  31386136 aatttgaacaaatagttaatgttttgtgata-gttatttagttcaaagtgttgtcaaataacagctatagaaccgctataa 31386057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 51295684 - 51295736
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtc 110  Q
    ||||| ||||||| |||||||| | |||| |||||||||||||||||||||||    
T  51295684 tttgatcaaatcgttattgtttcgtgatacgctatttagtacaaaatgttgtc 51295736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 54842244 - 54842196
Alignment:
Q  69 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||| || |||| ||||||||||| ||||||||||||||||||    
T  54842244 cgctattgttctgtgatacgctatttagtataaaatgttgtcaaatagc 54842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 27016970 - 27016927
Alignment:
Q  71 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||    
T  27016970 ctattattttgtgatatactatttagtacaaaatgttgtcaaat 27016927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 20690139 - 20690081
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||||||||  ||||||  ||||||||  ||||||||| ||||||||    
T  20690139 tttgaacaaatcgctattgttcggcgatacactatttagagcaaaatgttatcaaatag 20690081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 42064160 - 42064218
Alignment:
Q  77 ttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||| |||||||||||||||| ||||||||||| || || || | |||||||||    
T  42064160 ttttgcgatctgctatttagtacaaagtgttgtcaaatggctgccattgcggcgctata 42064218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 48198141 - 48198079
Alignment:
Q  41 actatagcgtagt-gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 102  Q
    |||||||| |||| ||| ||||||| ||||||||||||| || |||||| |||||||||||||    
T  48198141 actatagcttagtagaattttgaactaatcgctattgttctgtgatatgttatttagtacaaa 48198079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 1813265 - 1813349
Alignment:
Q  51 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 136  Q
    |||| |||||||||||||| ||||||||  ||||||||| | |||| || || |||||||||||||  ||||||| ||| ||||||    
T  1813265 agtggaatttgaacaaatcactattgttccgcgatatgcca-ttagcacgaagtgttgtcaaatagtggctatagcggcactataa 1813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 24830135 - 24830196
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    |||| ||||| |||||||||||||| | | |||  |||||||||| ||||||||||||||||    
T  24830135 gaaagttgaaaaaatcgctattgttctacaatacactatttagtataaaatgttgtcaaata 24830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 32954243 - 32954328
Alignment:
Q  39 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||| ||| | |||||| |||||| ||| || ||   | ||| |||||||||||||||||||||||| |||| |||||||    
T  32954243 ccactatagcatagcggaatttggacaaattgcttttattccacaatacgctatttagtacaaaatgttgtcatatagaagctata 32954328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 39544175 - 39544208
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagcta 122  Q
    ||||||||||||||||||||||||| ||||||||    
T  39544175 ctatttagtacaaaatgttgtcaaagagcagcta 39544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 43307673 - 43307600
Alignment:
Q  71 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattg 144  Q
    ||||||||||| |||| ||| |||||||||||||||||| | ||||  | ||||| |||||||||  |||||||    
T  43307673 ctattgttttgtgatacgctgtttagtacaaaatgttgttagatagtggttatagtggcgctatagcactattg 43307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 50376264 - 50376231
Alignment:
Q  92 tttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||||||||||||| |||||||    
T  50376264 tttagtacaaaatgttgtcaaatagcggctatag 50376231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 162903 - 162963
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||| | |||| || ||||||  ||||||||||||||||| |||| ||||||    
T  162903 aatttgaacaaattgttattattctgcgatgcgctatttagtacaaaatattgtgaaatag 162963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 29208265 - 29208325
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||||| |||||||   ||||| ||| |||||||||||||||| | ||||||    
T  29208265 aatttgaacaaatcgttattgttccacgatacgctgtttagtacaaaatgttttgaaatag 29208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 117
Target Start/End: Original strand, 34363256 - 34363284
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||||||||||||||||||    
T  34363256 ctatttagtacaaaatgttgtcaaatagc 34363284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 33120617 - 33120560
Alignment:
Q  60 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||    
T  33120617 tgaacaaatcgttgttgttctgcaatatgctatttagtacaaaatgttgtcaaatagc 33120560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 2302766 - 2302706
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||||||| ||||||||    
T  2302766 aatttgaacaaatcgatattgttaggcgatatgttatttagtacaaaatgttatcaaatag 2302706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 27483037 - 27483149
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 141  Q
    ||||| ||||| | |||||||||||| ||||||| || || |||| |||||  |||||||||| |||||||||||| ||||||| ||| |||||  ||||    
T  27483037 ctataacgtagaggaatttgaacaaaccgctattattctgagatacgctatccagtacaaaatattgtcaaatagcggctatagtggcactatagcacta 27483136  T
Q  142 ttgtatagcggaa 154  Q
    ||| | |||||||    
T  27483137 ttgcacagcggaa 27483149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 30560088 - 30560179
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaa-tgttgtcaaatagcagctatagaggcgctataatactattgta 146  Q
    |||||| ||||| | ||||||||||||||||  |||||||||| |||| ||||||||||| |||||||||| ||| |||||  |||||||||    
T  30560088 aatttggacaaaccactattgttttgcgatacactatttagtaaaaaaatgttgtcaaattgcagctatagtggcactatagcactattgta 30560179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 26273114 - 26273036
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 120  Q
    ||||||||||| | |||||||| ||||| |||||||| || |||| ||| ||||||||||| ||||||| |||||||||    
T  26273114 ctatagcgtagaggaatttgaataaatcactattgttctgtgatacgctgtttagtacaaagtgttgtccaatagcagc 26273036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 8282910 - 8282849
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||||||| |||||||| ||| ||||||| ||||| ||||||||||| |||||||||    
T  8282910 aatttgaacaaatagctattgtcttgtgatatgcgatttattacaaaatgttctcaaatagc 8282849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 21226911 - 21227004
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||| ||| | ||||||||||||  |||||||||   | ||| |||||| ||||||||||||||||||||||| |||||||  ||||||||    
T  21226911 ctatagcatagcggaatttgaacaaaaagctattgttcctccatacgctattcagtacaaaatgttgtcaaatagctgctatagtagcgctata 21227004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 37632205 - 37632120
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||| ||||||||| |||| |||||||||| || ||||   ||||| |||||||| ||||||||| | |||||||||||||||||    
T  37632205 cactacagcgtagtggaattggaacaaatcgttactgttccacgatacgctatttattacaaaatggtatcaaatagcagctatag 37632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 45371159 - 45371098
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||| ||||| | ||||||||  || ||||||||||||||||||||||||||||||||||    
T  45371159 aatttggacaaaccactattgttccgcaatatgctatttagtacaaaatgttgtcaaatagc 45371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 4050427 - 4050511
Alignment:
Q  41 actatagcgtagtgaaatttgaacaaa-tcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||||| | |||||||| ||| ||| ||||||||  | |||||||||||||| |||||| |||||||||||||| ||||    
T  4050427 actatagcgtagcggaatttgaaaaaaatcgttattgtttcaccatatgctatttagtccaaaatattgtcaaatagcaggtata 4050511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 27400521 - 27400604
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||||| | ||| |||||||||||||||||||||||  ||  ||||||||  |||||||||| | |||||||| |||||||    
T  27400521 cactatagcatggtggaatttgaacaaatcgctattgttccgcagtatgctataaagtacaaaatatcgtcaaataacagctat 27400604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 13869884 - 13869826
Alignment:
Q  77 ttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||| ||||||||||||||||||||||||||||||| ||  || ||||||| ||||||    
T  13869884 ttttgtgatatgctatttagtacaaaatgttgtcaaacagtggcaatagaggtgctata 13869826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 30692517 - 30692459
Alignment:
Q  59 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||| |  ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  30692517 ttgaacaaaccaatattgttttgccatatgctatgtagtacaaagtgttgtcaaatagc 30692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 29749219 - 29749300
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||||||||  |||||||||| |||||| ||  ||||| ||| |||||| ||||||||| |||||  ||||||||    
T  29749219 gaaatttgaacaaatcattattgttttgtgatatgttaactagtaaaaagtgttgttaaatagcagttatagcagcgctata 29749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 3556718 - 3556650
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaatt 156  Q
    ||||||||| |||||||||||||||||||  | || || |||||||||| || ||||| ||||||||||    
T  3556718 gctatttagcacaaaatgttgtcaaatagttgttacagtggcgctataacaccattgtgtagcggaatt 3556650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 24857430 - 24857327
Alignment:
Q  17 ttgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||||| |||||| |||||| |||||||| | |   ||||| |||||||||| ||| ||    |||||||||||| |||||||||||||||||||||    
T  24857430 ttgttaaatggcggcgctatagc-actatagctttgcagaattttaacaaatcgccattcttccatgatatgctattttgtacaaaatgttgtcaaatag 24857332  T
Q  117 cagct 121  Q
     ||||    
T  24857331 aagct 24857327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 40710160 - 40710077
Alignment:
Q  51 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||| |||||||||||||   ||||||| |||||| || |||| |||||||||||||| | |||||||||||||| || ||||||    
T  40710160 agtggaatttgaacaaattattattgttatgcgatgtgttatt-agtacaaaatgttgactaatagcagctatagtggtgctata 40710077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 13851079 - 13850991
Alignment:
Q  44 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctat 134  Q
    ||||||||| | ||||||| ||| | ||||||  |||| ||||| ||||||||||||||||||| ||||||||  || ||||||| |||||    
T  13851079 atagcgtagaggaatttgagcaagttgctatt--tttgtgatatactatttagtacaaaatgttatcaaatagtggcaatagaggtgctat 13850991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 18737690 - 18737733
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagt 97  Q
    ||||||||||||||| |||||||||| | |||||||||||||||    
T  18737690 gaaatttgaacaaattgctattgtttcgggatatgctatttagt 18737733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 24855602 - 24855531
Alignment:
Q  44 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    ||||||||| | |||||||||||||| |||||||| |||  ||| ||||||||||| |||  ||||||||||    
T  24855602 atagcgtagcggaatttgaacaaatcactattgttctgcagtatactatttagtactaaaaattgtcaaata 24855531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 26445574 - 26445499
Alignment:
Q  60 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||||| || |||||| | |||   ||||||||||||||  ||||||||||||||| ||||| |||||||||    
T  26445574 tgaacaaatcacttttgtttcgtgatccactatttagtacaaagcgttgtcaaatagcagttatagtggcgctata 26445499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 32616828 - 32616769
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||| ||||  ||| |||| |||||||||||||||||| | |||||||||||    
T  32616828 atttgaacaaattgctacagttctgcgttatgctatttagtacaaagtattgtcaaatag 32616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 44617697 - 44617732
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||||||| |||||||||||||||||||||    
T  44617697 ctatttagtacaaagtgttgtcaaatagcagctata 44617732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 9112412 - 9112478
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||| ||||| | || ||| |||||||| ||||||||||||||||||||| ||| |||| ||||||    
T  9112412 tagtggaatttaaccagatcactattgttctgcgatatgctatttagtacagaatattgtgaaatag 9112478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 12196923 - 12196992
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||| |||||| ||||||||||| || ||||| | ||||||||||  |||||| |||||||||||||||    
T  12196923 aaattttaacaaaccgctattgtttcgctatatg-tgtttagtacaatgtgttgtaaaatagcagctatag 12196992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 12441351 - 12441420
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||| |||||| ||||||||||| || ||||| | ||||||||||  |||||| |||||||||||||||    
T  12441351 aaattttaacaaaccgctattgtttcgctatatg-tgtttagtacaatgtgttgtaaaatagcagctatag 12441420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 2701657 - 2701749
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||| | ||| |||||||||||||| ||||  || ||||||||||| ||||||| | |||||  ||||| | ||||| |||||||||    
T  2701657 ctatagcgtagcggaatatgaacaaatcgctaatgttccgcaatatgctattttgtacaaattattgtc-gatagccgttatagcggcgctata 2701749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 4114736 - 4114796
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||| |||||||| | ||||| | || ||| |||||||||||||||||||||    
T  4114736 aatttgaacaaatcactattgttctacgataag-tagttactacaaaatgttgtcaaatagc 4114796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 14928301 - 14928232
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    |||| ||||||||||||||||||||  |||||||    |||| |||||| |||||||| |||||||||||    
T  14928301 tagcttagtgaaatttgaacaaatctttattgttacatgatacgctattaagtacaaagtgttgtcaaat 14928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 16950289 - 16950318
Alignment:
Q  90 tatttagtacaaaatgttgtcaaatagcag 119  Q
    ||||||||||||||||||||||||||||||    
T  16950289 tatttagtacaaaatgttgtcaaatagcag 16950318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 42843363 - 42843424
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||| |||||||||  | |||| |||||| |||| ||| |||||||||||||    
T  42843363 aaatttgaacaaattgctattgttccgggataagctattaagtataaattgttgtcaaatag 42843424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 44806258 - 44806319
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||||||  |||| | |||  ||||| ||||||||||||||| ||||||||||||||    
T  44806258 aatttgaacaaactgctactatttcacgataggctatttagtacaaagtgttgtcaaatagc 44806319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 1318716 - 1318620
Alignment:
Q  40 cactatagcgt-agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||| | || ||||||||||| ||  |||||||  || ||| ||||||||| || | ||||||||||||||||||| ||| | |||||||    
T  1318716 cactatagcgtgaatggaatttgaacaagtccttattgttccgcaataagctatttagaactacatgttgtcaaatagcagctgtagtgacgctata 1318620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 3238345 - 3238297
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaat 104  Q
    ||||||||| ||||||||||||| ||| ||||| || ||||||||||||    
T  3238345 aatttgaactaatcgctattgttctgcaatatgttaattagtacaaaat 3238297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 8284420 - 8284356
Alignment:
Q  45 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgt 109  Q
    |||| ||||| |||||||||||||| | ||||||  |||||| ||| ||||||||||| ||||||    
T  8284420 tagcatagtggaatttgaacaaatcaccattgttccgcgatacgctttttagtacaaagtgttgt 8284356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 12856481 - 12856408
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    ||||||| ||||||| ||||||||||||| || ||||  || ||||| ||||||||||||||| | |||| |||||    
T  12856481 cactataccgtagtggaatttgaacaaattgcaattg--ttacgatacgctatttagtacaaactattgttaaata 12856408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 14730294 - 14730378
Alignment:
Q  41 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||| | ||||||||| || |||||| ||||| | | |||| ||| |||||||||| |  |||||||||||| ||||||    
T  14730294 actatagcgtggcgaaatttgatcagatcgctgttgttctacaatatactacttagtacaaagtactgtcaaatagcatctatag 14730378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 39550949 - 39551021
Alignment:
Q  63 acaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||| ||||||||||||| ||||  ||||| ||||  || |||||||||||||| ||||||| ||| |||||    
T  39550949 acaaaccgctattgttttgtgatacactattgagtatgaagtgttgtcaaatagcggctatagtggcactata 39551021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 43935226 - 43935142
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||| || ||||| |||||||||||||  ||||||||  | |||| ||| ||||| ||||||| |||| |||||||| |||||    
T  43935226 cactattgcatagtggaatttgaacaaatgactattgttccgtgatacgctgtttagcacaaaatattgtgaaatagcaactata 43935142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 415145 - 415214
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||| ||||||  |||||||    
T  415145 aatttgaacaagtcgctattgtttcgtgatttgctatttagtacaaaatgttgtgaaatagttgctatag 415214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 55314493 - 55314554
Alignment:
Q  53 tgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 114  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||| ||||||    
T  55314493 tgaaatttgaacaaattgctattgttctgcgatatgctaattagtacaaagtgttatcaaat 55314554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 13298529 - 13298589
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||| |||||||| || |||||||||||||||||||| || ||||||||||    
T  13298529 aatttgaacaaatcactattgttctgtgatatgctatttagtacaaagtgctgtcaaatag 13298589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 50794568 - 50794643
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||| |||||||||||||||  |||||| |||  ||||||| |||||||||| |||||||||||||||| |||||    
T  50794568 tagtggaatttgaacaaatcgtcattgttctgcactatgctagttagtacaaagtgttgtcaaatagcagttatag 50794643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 34581592 - 34581658
Alignment:
Q  69 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    ||||||||||  | |||| |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  34581592 cgctattgttccgtgatacgctatttagtacaaaatgttgtcaaatagcggctatagtagcgctata 34581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 2843636 - 2843583
Alignment:
Q  62 aacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 115  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||||||    
T  2843636 aacaaatcactattgttctgcgatacactatttagtacaaaatgttgtcaaata 2843583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 3301687 - 3301608
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 135  Q
    |||||||| || | ||| |||||||||||||  ||||||||||||| || |||| ||||||||||||||| | |||||||    
T  3301687 aatttgaaaaatttgctgttgttttgcgatactctatttagtacaatattttgttaaatagcagctatagtgacgctata 3301608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 7295045 - 7295176
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 155  Q
    |||||||||||||| ||||||||||| |||| |||||||| | |||||  |||||||  ||  |||| | |||||||||| |||| | || | ||||||     
T  7295045 aatttgaacaaatcactattgttttgtgataggctatttaatgcaaaacattgtcaataagtggctacaaaggcgctatagtactgtagtgtcgcggaac 7295144  T
Q  156 tcaaacaaactactatcttctgcgattgacaa 187  Q
    |  ||||||||||||| ||| | |||||||||    
T  7295145 ttgaacaaactactattttccgtgattgacaa 7295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 17223403 - 17223482
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagct 121  Q
    ||||||||||| | ||||| ||||||| | | |||||||||||||  | |||||||||||| |||||||| |||||||||    
T  17223403 ctatagcgtagcggaattttaacaaattgttgttgttttgcgatacacgatttagtacaaattgttgtcatatagcagct 17223482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 20710031 - 20709960
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 113  Q
    ||||| ||||| | ||||||||||||||||||||||| ||| ||| |||||||||| |||| |||| |||||    
T  20710031 ctataacgtagcggaatttgaacaaatcgctattgttctgcaatacgctatttagtgcaaagtgttatcaaa 20709960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 25402826 - 25402909
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||   |||||||||| |||||||||||||   |||| | ||| || ||||||||||||||||||||||| |||||    
T  25402826 ctatagcgtagcagaatttgaacagatcgctattgtttaatgatacgatatgtaatacaaaatgttgtcaaatagcagttatag 25402909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 31675093 - 31675030
Alignment:
Q  65 aaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagagg 128  Q
    |||| |||||||| ||| |||| | ||||||||||||||||||||||||| | |||||||||||    
T  31675093 aaattgctattgtcttgtgatacgttatttagtacaaaatgttgtcaaattggagctatagagg 31675030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 27722473 - 27722407
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagcta 122  Q
    ||||||||| ||| |||||||||   |||||||||||| |||||||||| |||||||||| ||||||    
T  27722473 aatttgaactaattgctattgttccacgatatgctattaagtacaaaatattgtcaaatatcagcta 27722407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 34417827 - 34417889
Alignment:
Q  61 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    |||||||| ||||||||| ||||||   |||||||||||||| |||||||||||||| |||||    
T  34417827 gaacaaatagctattgttctgcgatcctctatttagtacaaagtgttgtcaaatagccgctat 34417889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 3144541 - 3144586
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctatagaggcgctat 134  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||    
T  3144541 ctatttagtacaaaatgttgtcaactggcagcgatagaggcgctat 3144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 37538421 - 37538484
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatt---tagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||||||||||||||| ||||||| |   || |||||| |||||||||||||    
T  37538421 aatttgaacaaatcgctattgttttgcggtatgctacttactattacaaagtgttgtcaaatag 37538484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 37579651 - 37579590
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||| || |||||| |||||||  ||||||||||||||||||| || ||||||||||||||    
T  37579651 aattttaataaatcgttattgttccgcgatatgctatttagtactaagtgttgtcaaatagc 37579590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 48244508 - 48244443
Alignment:
Q  51 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||| ||||| ||||||||||||||||| |||||||  || |||||||||  ||||||||||||||    
T  48244508 agtggaatttaaacaaatcgctattgttctgcgatacactgtttagtacagtatgttgtcaaatag 48244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 56049815 - 56049770
Alignment:
Q  91 atttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 136  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||    
T  56049815 atttagtacaaagtgttgtcaaatagcagctatagtagcgctataa 56049770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 1202434 - 1202394
Alignment:
Q  77 ttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  1202434 ttttgcgatatgctatttagtataaaatattgtcaaatagc 1202394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 1276902 - 1276986
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||| | ||| |||||||||||||| | |||||||| || |||| ||| || |||| ||| | |||||||||||||||||||    
T  1276902 cactatatcatagggaaatttgaacaaaccactattgttatgtgatacgctgttcagtaaaaagttttgtcaaatagcagctata 1276986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 2562482 - 2562550
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||||||||||||  |||   |||| ||| ||||||||||||  |||||||||||||||||||    
T  2562482 aatttgaacaaatcgctataatttcctgatacgctgtttagtacaaaacattgtcaaatagcagctata 2562550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 20989525 - 20989561
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||||||||||||||||||||| |||||||    
T  20989525 ctatttagtacaaaatgttgtcaaatagcggctatag 20989561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 39032635 - 39032511
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 141  Q
    ||||||||||||| | |||||||||| ||||| || |  | |||||| ||||| ||||||||||||||| ||||   |||| || |||||||||  ||||    
T  39032635 ctatagcgtagtggagtttgaacaaaccgctaatgctccgtgatatgttatttggtacaaaatgttgtcgaataatggctacaggggcgctatagcacta 39032536  T
Q  142 ttgtatagcggaattcaaacaaact 166  Q
    |||  |||| |||||  ||||||||    
T  39032535 ttgcgtagcagaatttcaacaaact 39032511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 13458866 - 13458783
Alignment:
Q  40 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||| | |||||||||||||||||||| | ||||||  |  ||| ||||||||||| ||| ||||||||||| ||| ||||    
T  13458866 cactatatcatagtgaaatttgaacaaatcaccattgttccgtaatacgctatttagtataaagtgttgtcaaatggcaactat 13458783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 18968308 - 18968343
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18968308 ctatttagtacaaaatgttgtcaaatagcggctata 18968343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 19062274 - 19062218
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| | |||| ||||||    
T  19062274 tttgaacaaatctctattgttttg--atatgctatttagtacaaagttttgtaaaatag 19062218  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 39064935 - 39064896
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttg 81  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  39064935 ctatagcgtagtggaatttgaacaaattgctattgttttg 39064896  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 47789165 - 47789232
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    ||||||||||||| ||| ||| ||| |||  |||||||||||||| |||||||||||||  |||||||    
T  47789165 tttgaacaaatcgttatcgttctgcaatactctatttagtacaaactgttgtcaaatagtggctatag 47789232  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 26275600 - 26275534
Alignment:
Q  57 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||||||||||||||||||     ||| ||||||||||||||||| |||| ||||||| |||||    
T  26275600 atttgaacaaatcgctattgttccaaaatacgctatttagtacaaaatattgtgaaatagcggctat 26275534  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 33714294 - 33714228
Alignment:
Q  50 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||| ||||||||||||||||| |||||   ||||| || |||||||||||||| |||| ||||||    
T  33714294 tagtggaatttgaacaaatcgctgttgttccacgataagccatttagtacaaaatattgtgaaatag 33714228  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 34417346 - 34417400
Alignment:
Q  69 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    ||||||||||  |||||  ||||||||||||||| |||||||||||||| |||||    
T  34417346 cgctattgttccgcgatccgctatttagtacaaagtgttgtcaaatagccgctat 34417400  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 38596717 - 38596771
Alignment:
Q  55 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgt 109  Q
    ||||||||| ||||||||| ||||||||||||  ||||| |||||||||| ||||    
T  38596717 aaatttgaagaaatcgctactgttttgcgatacactattcagtacaaaatattgt 38596771  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 117
Target Start/End: Complemental strand, 4762580 - 4762551
Alignment:
Q  88 gctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||||||||||||||||||||||||||||    
T  4762580 gctatttagtacaaaatgttgtcaaatagc 4762551  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 9318706 - 9318759
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgt 109  Q
    |||||||||||||   |||||||| | |||||||||||||||||||||| ||||    
T  9318706 aatttgaacaaattcatattgtttagtgatatgctatttagtacaaaatattgt 9318759  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 27098969 - 27099033
Alignment:
Q  13 aatattgttaaatagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgtt 78  Q
    |||||||| |||||||||||||  ||| ||||| || ||||| ||||||||||||||||| |||||    
T  27098969 aatattgtcaaatagcggcgttgcagc-actatggcttagtggaatttgaacaaatcgctgttgtt 27099033  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 47486106 - 47486045
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    |||||||||||| | ||||||||  |||| ||||||||||||||||||| || | |||||||    
T  47486106 aatttgaacaaacctctattgttccgcgacatgctatttagtacaaaatattttgaaatagc 47486045  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 53768266 - 53768201
Alignment:
Q  58 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    |||||||||| ||||||||||    ||| |||||| ||||||||  ||||||||||||||||||||    
T  53768266 tttgaacaaaccgctattgttccatgatctgctatatagtacaacgtgttgtcaaatagcagctat 53768201  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 681986 - 682030
Alignment:
Q  72 tattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    ||||||| |||||| ||||| ||||||||| ||||||||||||||    
T  681986 tattgttctgcgatgtgctagttagtacaacatgttgtcaaatag 682030  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 3625744 - 3625804
Alignment:
Q  42 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 102  Q
    |||||| |||||| |||||||||| |||||||||||| ||| ||| ||| | |||||||||    
T  3625744 ctatagtgtagtggaatttgaacagatcgctattgttctgcaatacgctgtgtagtacaaa 3625804  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 8721961 - 8721885
Alignment:
Q  80 tgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaatt 156  Q
    ||||||| ||||||||||||||||| ||||| ||| | |||||||| | ||||||   |||||||  ||||||||||    
T  8721961 tgcgatacgctatttagtacaaaatattgtcgaatggaagctatagtgtcgctatggcactattgcgtagcggaatt 8721885  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 30617329 - 30617270
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||||||||||||||||| |||| || |||| |||| |||||||||||| |||| ||||||    
T  30617329 aatttgaacaaatcgctagtgttctgtgatacgcta-ttagtacaaaatattgtgaaatag 30617270  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 34416907 - 34416967
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 116  Q
    |||| |||||||| |||||||||  |||||   |||||||||||||| |||||||||||||    
T  34416907 aattggaacaaatagctattgttccgcgatcctctatttagtacaaagtgttgtcaaatag 34416967  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 37854047 - 37854003
Alignment:
Q  81 gcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||||| ||||| |||| |||||| ||||||||    
T  37854047 gcgatatgctatttagtataaaattttgttaaatagaagctatag 37854003  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 41367197 - 41367233
Alignment:
Q  89 ctatttagtacaaaatgttgtcaaatagcagctatag 125  Q
    |||||||||||||||||||| |||||||||| |||||    
T  41367197 ctatttagtacaaaatgttgccaaatagcagttatag 41367233  T

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Target: scaffold0428 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 11518 - 11459
Alignment:
Q  93 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 152  Q
    ||||| ||||||||||| |||||||| |||||| |||||||||| |||||||| ||||||    
T  11518 ttagtgcaaaatgttgtgaaatagcatctatagtggcgctataaaactattgtgtagcgg 11459  T

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Target: scaffold0428; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 4494 - 4553
Alignment:
Q  93 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 152  Q
    ||||| ||||||||||| |||||||| |||||| || ||||||| |||||||| ||||||    
T  4494 ttagtgcaaaatgttgtgaaatagcatctatagtggtgctataaaactattgtgtagcgg 4553  T

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Target: scaffold0940 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 2031 - 2113
Alignment:
Q  41 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 123  Q
    |||||| | ||| |||||||| ||||| |  | ||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  2031 actatatcatagcgaaatttggacaaaccattgttgttctgcgatatgctatttaatacaaagtgttgtcaaatagctgctat 2113  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 4389 - 4432
Alignment:
Q  54 gaaatttgaacaaatcgctattgttttgcgatatgctatttagt 97  Q
    ||||||||||||||| |||||||||| | |||||||||||||||    
T  4389 gaaatttgaacaaattgctattgtttcgggatatgctatttagt 4432  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 96701 - 96735
Alignment:
Q  90 tatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||||||||||||||||||||| ||||||    
T  96701 tatttagtacaaaatgttgtcaaatagcggctata 96735  T

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Target: scaffold0898 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 534 - 594
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 117  Q
    ||||| |||||| | |||||||| || |||| ||||||||||||||| ||||||||||||||    
T  534 aatttaaacaaacctctattgttctgggata-gctatttagtacaaattgttgtcaaatagc 594  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 10740 - 10608
Alignment:
Q  56 aatttgaacaaatcgctattgtt-ttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaa 154  Q
    ||||||| ||||||  ||||||| ||| ||||  ||| |||||| ||||| |||| || |||  |||||||||||  ||||||||| ||| ||||| |||    
T  10740 aatttgagcaaatcattattgttcttgtgataaactaattagtataaaatattgtaaagtagaggctatagaggcattataatactgttgcatagcagaa 10641  T
Q  155 ttcaaacaaactactatcttctgcgattgacaa 187  Q
    ||  |||||||  |||| |||||||||| ||||    
T  10640 tttgaacaaaccgctattttctgcgattcacaa 10608  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 13786 - 13854
Alignment:
Q  56 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 124  Q
    |||||||||||||| ||||||||   | ||||||  ||||||||| | |||||||||||| ||||||||    
T  13786 aatttgaacaaatctctattgttccacaatatgccgtttagtacatagtgttgtcaaataacagctata 13854  T

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