View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18901_low_23 (Length: 246)
Name: NF18901_low_23
Description: NF18901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18901_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 40103336 - 40103103
Alignment:
| Q |
1 |
caatggatcaactaaatcttgccgcattccacaccattccctgttgccaatgcgcttctccactcgaactaaacaccgctaacatgtgtgtcaaatgttt |
100 |
Q |
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| T |
40103336 |
caatggatcaactaaatcttgccacattccacaccattccctgttgccaatgcgcatctccactcgaactaaacaccgctaacatgtgtgtcaaatgttt |
40103237 |
T |
|
| Q |
101 |
acgctcaaaaaccaatatcacagaaggtttactcaagaaacttagactaacacattgcaccgaatgcgaatgctatttacaaccccccacttggatcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40103236 |
acgctcaaaaaccaatatcacagaaggtttactcaagaaacttagactaacacattgcaccgaatgcgaatgctatttacaaccccccacttggatcaaa |
40103137 |
T |
|
| Q |
201 |
ctaataccacaatcaaaacagtttcttgcatttt |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
40103136 |
ctaataccacaatcaaaacagtttcttgcatttt |
40103103 |
T |
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