View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18906_low_3 (Length: 306)
Name: NF18906_low_3
Description: NF18906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18906_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 295
Target Start/End: Original strand, 13600001 - 13600276
Alignment:
| Q |
16 |
ctttggtcaaggctgctaagcaggtacgttgcattttacgaagtttcgtagaagctttaaatatggttatgttggactgtagaaattgttgagtaatttt |
115 |
Q |
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| T |
13600001 |
ctttggtcaaggctgctaagcaggtatgttgcattttacaaagtttcgtagaagctttaaatatggttatgttggactgtagaaattgt-gagtaatctt |
13600099 |
T |
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| Q |
116 |
ctggatattattttaaatgtaataagagttgaatcactaaactactaattaaatggactatgctattcctaacgggtcagattaacgggctgaatataat |
215 |
Q |
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| T |
13600100 |
ttggatattattttaaatgtaataagagttgaatcactaaacta---attaaatggactatgctattcctaacgggtaagattaactggctgaatataat |
13600196 |
T |
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| Q |
216 |
ctgtaataataattacaaaatatacgatcatatttacaacaagtgtcatacattttaaacaattctgctcaaatttgatg |
295 |
Q |
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| T |
13600197 |
ctgtaataataattacaaaatatacgatcatatttacaacaagtgtcatacattttaaacaattctgctcaaatttgatg |
13600276 |
T |
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