View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18909_high_11 (Length: 239)
Name: NF18909_high_11
Description: NF18909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18909_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 32223700 - 32223479
Alignment:
| Q |
1 |
tggggagtgagtaaaccagagttaagtttaattgcataggggttagtgtggtggtgatggtggtggttagagaatgaccaaacaatgagtgacggatgta |
100 |
Q |
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| T |
32223700 |
tggggagtgagtaaaccagagttaagtttaattgcataggggttagtgtggtggtgatggtggtggttagagaatgaccaaacaatgagtgacggatgta |
32223601 |
T |
|
| Q |
101 |
tattcaacaaagacgaaatttgttgcttcatttttctatacaggtgttgctaaagttctgtaccttgcaccagaattcaatggcc-ttgttttaatttcc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32223600 |
tattcaacaaagacgaaatttgttgcttcatttttctatacaggtgttgctaaagttctgtaccttgcaccagaattcaatggcctttgttttaatttcc |
32223501 |
T |
|
| Q |
200 |
atttctatttctactactagtg |
221 |
Q |
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|||||||||||||||| ||||| |
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| T |
32223500 |
atttctatttctactattagtg |
32223479 |
T |
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