View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18909_low_15 (Length: 229)
Name: NF18909_low_15
Description: NF18909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18909_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 43868617 - 43868423
Alignment:
| Q |
18 |
actataaccaacactactattactcaaaggcatatactctttctcttgttgtgctagtgatacatcattattatcaatattccaatgaaaaacatcatca |
117 |
Q |
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| T |
43868617 |
actataaccaacactactattactcaaaggcatatactctttctcttgttgtgctagtgatacatcattattatcaatattccaatgaaaaacatcatca |
43868518 |
T |
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| Q |
118 |
cttgtcatgtcaaaaactgattccaaatcatcaagttcttcatccttaacctttaacatttcatttttggatgcatccatttcattctcttgttt |
212 |
Q |
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| T |
43868517 |
cttgtcatgtcaaaaactgattccaaatcatcaagttcttcatccttaacctttaacatttcacttttggatgcatccatttcattctcttgttt |
43868423 |
T |
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