View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18909_low_8 (Length: 335)
Name: NF18909_low_8
Description: NF18909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18909_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 36955262 - 36954949
Alignment:
| Q |
1 |
caataagattgaaaaaggataatcatgagtttgtagacatattgagattgaaaacgtagttgacaagcttataatgaattatgtaaacataattaatttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36955262 |
caataagattgaaaaaggataatcatgagtttgtagacatatagagattgaaaacgtagttgacaagctta--atgaattatgtaaacataattaatttt |
36955165 |
T |
|
| Q |
101 |
gggttttgaaaattactagatgttggatctatcgctatataattatatttgcctttctcaaaactatgtctagctgtcttgtaatgtgagagtccgtgca |
200 |
Q |
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| T |
36955164 |
gggttttgaaaattactagatgttggatctatcgctatataattatctttgcctttctcaaaactatgtctagctgtcttgtaatgtgagagtccgtgca |
36955065 |
T |
|
| Q |
201 |
tcttgatccatgtactatacctacctaatggggaccatcattgtttctgatattattattgcaatatggatatttgagagttgaggttaagattcttaat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36955064 |
tcttgatccatgtactatacctacctaatggggaccatcattgtttttgatattattattgcaatatggatatttgagagttgaggttaagattcttaat |
36954965 |
T |
|
| Q |
301 |
ttttaatgtacgttcc |
316 |
Q |
| |
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|||||||||||||||| |
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| T |
36954964 |
ttttaatgtacgttcc |
36954949 |
T |
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