View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18910_high_5 (Length: 237)
Name: NF18910_high_5
Description: NF18910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18910_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46039887 - 46039665
Alignment:
| Q |
1 |
aaattcaaaagttcgaacaatctttacaggacttaaaagtagaactaagaaaaataaagcagaataacaatttgtcggataacaagatcgcttcaaaagc |
100 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46039887 |
aaattcaaaagttccaacaatctttacaggacttaaaagtagaactaagaaaaataaagcagaataacaatttgtcggataacaagatcgcttcaaaagc |
46039788 |
T |
|
| Q |
101 |
tgtacaatcagaaataaagccaatatttagacatttgagagaaataagaactgagttatcattatggttagaacacaatgaagtattgcaggatgattta |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46039787 |
tgtacagtcagaaataaagccaatatttagacatttgagagaaataagaactgagttatcattatggttagaacacaatgaagtattgcaggatgattta |
46039688 |
T |
|
| Q |
201 |
caagctagacatccatcaatgtg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
46039687 |
caagctagacatccatcaatgtg |
46039665 |
T |
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