View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18911_low_10 (Length: 215)
Name: NF18911_low_10
Description: NF18911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18911_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 34232439 - 34232298
Alignment:
| Q |
55 |
ttaagggttatgaattataatgaatgatgaagaatgaaatataattgaagatttgtgtgtatatataaatatgaagaggaaagagagaggaaagaggtgt |
154 |
Q |
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| T |
34232439 |
ttaagggttatgaattataatgaatgatgaagaatgaaatataattgaagatttgtgtgtatatataaatatgaagaggaaagagagaggaaagaggtgt |
34232340 |
T |
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| Q |
155 |
ggttttttctaagaaggtgtgtgagtaagtgtaagtggacat |
196 |
Q |
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| T |
34232339 |
ggttttttctaagaaggtgtgtgagtaagtgtaagtggacat |
34232298 |
T |
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