View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18913_high_7 (Length: 294)

Name: NF18913_high_7
Description: NF18913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18913_high_7
NF18913_high_7
[»] chr7 (33 HSPs)
chr7 (11-171)||(8348621-8348781)
chr7 (172-275)||(32060785-32060888)
chr7 (171-275)||(6592818-6592922)
chr7 (172-275)||(6595034-6595137)
chr7 (172-277)||(18392675-18392780)
chr7 (11-141)||(8409869-8410003)
chr7 (172-250)||(1562509-1562587)
chr7 (172-251)||(20343500-20343579)
chr7 (171-250)||(21640345-21640424)
chr7 (172-250)||(24789426-24789505)
chr7 (171-249)||(12397415-12397493)
chr7 (171-249)||(31109069-31109147)
chr7 (184-261)||(43504630-43504708)
chr7 (172-261)||(2058515-2058604)
chr7 (172-249)||(4873644-4873721)
chr7 (172-249)||(12406780-12406857)
chr7 (171-228)||(18390506-18390563)
chr7 (172-249)||(20357028-20357105)
chr7 (184-261)||(21646552-21646630)
chr7 (184-248)||(47264190-47264254)
chr7 (172-261)||(39730933-39731024)
chr7 (179-229)||(21983809-21983859)
chr7 (184-248)||(2479883-2479947)
chr7 (184-248)||(44847632-44847696)
chr7 (172-261)||(48408398-48408489)
chr7 (179-229)||(79955-80005)
chr7 (171-249)||(24023818-24023896)
chr7 (184-241)||(1532897-1532954)
chr7 (184-261)||(21811751-21811828)
chr7 (184-229)||(21989473-21989518)
chr7 (171-248)||(18409322-18409400)
chr7 (172-248)||(18414198-18414275)
chr7 (185-230)||(49092237-49092282)
[»] chr4 (34 HSPs)
chr4 (171-275)||(5137874-5137978)
chr4 (172-275)||(5135649-5135752)
chr4 (171-275)||(8395190-8395294)
chr4 (172-275)||(8392982-8393085)
chr4 (171-275)||(7124488-7124592)
chr4 (172-275)||(7122267-7122370)
chr4 (172-261)||(31495811-31495902)
chr4 (171-249)||(9228685-9228763)
chr4 (172-250)||(24742499-24742577)
chr4 (172-249)||(3814528-3814605)
chr4 (172-249)||(9223899-9223976)
chr4 (172-249)||(51520973-51521050)
chr4 (171-248)||(56141510-56141587)
chr4 (171-247)||(18856234-18856310)
chr4 (172-247)||(18860446-18860521)
chr4 (170-250)||(13992800-13992881)
chr4 (179-231)||(5143807-5143859)
chr4 (179-231)||(8689044-8689096)
chr4 (172-250)||(5733169-5733247)
chr4 (179-229)||(16628353-16628403)
chr4 (179-229)||(38151918-38151968)
chr4 (179-261)||(45347324-45347406)
chr4 (179-228)||(3778116-3778165)
chr4 (179-230)||(5148243-5148294)
chr4 (179-230)||(5268699-5268750)
chr4 (172-261)||(28467977-28468068)
chr4 (179-229)||(6742896-6742946)
chr4 (179-229)||(10047932-10047982)
chr4 (179-229)||(16622774-16622824)
chr4 (184-229)||(29761182-29761227)
chr4 (179-229)||(54867745-54867795)
chr4 (172-248)||(31985127-31985204)
chr4 (184-229)||(36314716-36314761)
chr4 (184-229)||(36328925-36328970)
[»] chr6 (35 HSPs)
chr6 (171-275)||(34166665-34166769)
chr6 (180-275)||(13150857-13150952)
chr6 (172-275)||(34151828-34151931)
chr6 (172-275)||(34164444-34164547)
chr6 (172-275)||(6136444-6136547)
chr6 (172-275)||(33342585-33342688)
chr6 (172-275)||(25420797-25420900)
chr6 (172-277)||(16578996-16579101)
chr6 (172-277)||(16616279-16616384)
chr6 (171-251)||(16554453-16554533)
chr6 (171-251)||(16631009-16631089)
chr6 (172-261)||(6097895-6097986)
chr6 (167-249)||(22010184-22010266)
chr6 (180-277)||(27647476-27647573)
chr6 (171-228)||(6026833-6026890)
chr6 (172-261)||(3073252-3073343)
chr6 (171-249)||(11857490-11857568)
chr6 (171-249)||(14741925-14742003)
chr6 (171-229)||(16652715-16652773)
chr6 (172-250)||(30125018-30125096)
chr6 (172-229)||(5266596-5266653)
chr6 (172-229)||(14737085-14737142)
chr6 (172-231)||(411685-411745)
chr6 (184-248)||(23896880-23896944)
chr6 (172-247)||(6439008-6439083)
chr6 (179-229)||(5016976-5017026)
chr6 (172-241)||(26253589-26253659)
chr6 (179-229)||(31085953-31086003)
chr6 (185-261)||(2172013-2172090)
chr6 (179-246)||(5343990-5344057)
chr6 (184-261)||(5674242-5674320)
chr6 (180-229)||(5571757-5571806)
chr6 (179-224)||(21272469-21272514)
chr6 (172-248)||(22709568-22709645)
chr6 (179-227)||(28155097-28155145)
[»] chr3 (57 HSPs)
chr3 (171-275)||(10058026-10058130)
chr3 (171-275)||(10060248-10060352)
chr3 (171-275)||(10062470-10062574)
chr3 (171-275)||(10064692-10064796)
chr3 (171-275)||(10066914-10067018)
chr3 (172-275)||(10055805-10055908)
chr3 (172-275)||(10208778-10208881)
chr3 (171-275)||(10210977-10211081)
chr3 (168-275)||(3617030-3617137)
chr3 (171-275)||(4599004-4599108)
chr3 (172-275)||(4601225-4601328)
chr3 (172-277)||(6716085-6716190)
chr3 (172-251)||(54634710-54634789)
chr3 (172-261)||(37726208-37726299)
chr3 (171-229)||(6718287-6718345)
chr3 (172-250)||(25637013-25637091)
chr3 (171-249)||(28503318-28503396)
chr3 (172-249)||(28501152-28501229)
chr3 (172-229)||(45282585-45282642)
chr3 (172-261)||(800685-800776)
chr3 (171-250)||(22172661-22172740)
chr3 (172-250)||(40372256-40372334)
chr3 (171-261)||(23198439-23198531)
chr3 (172-250)||(8477924-8478002)
chr3 (170-250)||(7782633-7782714)
chr3 (181-229)||(40734084-40734132)
chr3 (184-231)||(27974446-27974493)
chr3 (179-230)||(36029658-36029709)
chr3 (179-229)||(16264896-16264946)
chr3 (172-250)||(18656951-18657029)
chr3 (179-229)||(21711768-21711818)
chr3 (171-248)||(23200652-23200730)
chr3 (179-229)||(30709266-30709316)
chr3 (171-248)||(37408035-37408113)
chr3 (172-241)||(7167813-7167882)
chr3 (172-248)||(26928080-26928157)
chr3 (184-229)||(27027273-27027318)
chr3 (185-231)||(27985971-27986017)
chr3 (179-229)||(39032025-39032075)
chr3 (172-229)||(8738542-8738599)
chr3 (172-229)||(9090780-9090837)
chr3 (171-250)||(1306525-1306605)
chr3 (172-231)||(32143868-32143928)
chr3 (181-229)||(40735015-40735063)
chr3 (179-222)||(1730916-1730959)
chr3 (172-261)||(33386137-33386228)
chr3 (172-230)||(40845220-40845279)
chr3 (184-246)||(2672431-2672493)
chr3 (184-246)||(2676587-2676649)
chr3 (171-229)||(16498636-16498694)
chr3 (179-229)||(27038608-27038658)
chr3 (179-229)||(35926057-35926106)
chr3 (179-229)||(40592252-40592302)
chr3 (179-229)||(48438782-48438832)
chr3 (188-249)||(27352097-27352158)
chr3 (177-246)||(32475997-32476066)
chr3 (177-246)||(32480855-32480924)
[»] chr8 (28 HSPs)
chr8 (171-275)||(42575806-42575910)
chr8 (172-275)||(15290143-15290246)
chr8 (172-275)||(15470512-15470615)
chr8 (171-277)||(3439087-3439193)
chr8 (172-250)||(4759534-4759612)
chr8 (171-250)||(33037286-33037365)
chr8 (171-249)||(18870020-18870098)
chr8 (172-250)||(36979936-36980014)
chr8 (172-249)||(10683739-10683816)
chr8 (172-229)||(25689561-25689618)
chr8 (172-249)||(30656205-30656282)
chr8 (172-250)||(2627318-2627397)
chr8 (184-247)||(7412876-7412939)
chr8 (172-247)||(39784325-39784400)
chr8 (167-249)||(18852622-18852704)
chr8 (172-249)||(7289427-7289504)
chr8 (172-231)||(25327664-25327723)
chr8 (179-229)||(5701959-5702009)
chr8 (179-249)||(6311858-6311928)
chr8 (171-229)||(10688617-10688675)
chr8 (185-261)||(1261428-1261505)
chr8 (172-261)||(26288426-26288517)
chr8 (172-261)||(26301683-26301774)
chr8 (172-261)||(26313677-26313768)
chr8 (172-250)||(31042908-31042987)
chr8 (184-229)||(4456575-4456620)
chr8 (166-246)||(35745904-35745985)
chr8 (185-229)||(23799105-23799149)
[»] scaffold0565 (1 HSPs)
scaffold0565 (172-275)||(3082-3185)
[»] chr2 (23 HSPs)
chr2 (172-275)||(12647864-12647967)
chr2 (167-249)||(44310466-44310548)
chr2 (172-261)||(32247263-32247352)
chr2 (172-261)||(6266274-6266365)
chr2 (172-249)||(9295862-9295939)
chr2 (170-261)||(30832919-30833012)
chr2 (172-249)||(39811477-39811554)
chr2 (172-246)||(14292051-14292125)
chr2 (172-249)||(11098387-11098464)
chr2 (171-261)||(32289147-32289239)
chr2 (172-261)||(4484832-4484923)
chr2 (179-229)||(8389631-8389681)
chr2 (184-261)||(25410175-25410253)
chr2 (179-232)||(36757425-36757478)
chr2 (169-248)||(40739380-40739460)
chr2 (184-231)||(28258682-28258729)
chr2 (179-229)||(10706733-10706783)
chr2 (179-229)||(21630511-21630561)
chr2 (179-229)||(33528105-33528155)
chr2 (179-229)||(39483443-39483493)
chr2 (179-223)||(20522794-20522838)
chr2 (172-261)||(3492286-3492377)
chr2 (179-229)||(23077952-23078002)
[»] chr5 (39 HSPs)
chr5 (172-277)||(10592844-10592948)
chr5 (171-277)||(16546215-16546321)
chr5 (167-275)||(25077701-25077809)
chr5 (167-275)||(25135670-25135778)
chr5 (172-277)||(40379678-40379783)
chr5 (170-277)||(16543992-16544099)
chr5 (172-277)||(22536747-22536852)
chr5 (171-277)||(40381888-40381994)
chr5 (170-261)||(9789718-9789811)
chr5 (171-277)||(29752284-29752391)
chr5 (172-261)||(15045190-15045279)
chr5 (169-249)||(1456635-1456715)
chr5 (171-261)||(18442142-18442234)
chr5 (171-261)||(26177465-26177557)
chr5 (171-250)||(29722151-29722231)
chr5 (172-250)||(29719965-29720044)
chr5 (172-250)||(30631870-30631948)
chr5 (172-249)||(27450332-27450409)
chr5 (167-261)||(16407636-16407732)
chr5 (184-261)||(26170370-26170448)
chr5 (171-249)||(27445489-27445567)
chr5 (172-249)||(29402550-29402627)
chr5 (172-249)||(43599241-43599318)
chr5 (172-249)||(43604733-43604810)
chr5 (172-249)||(43610225-43610302)
chr5 (171-277)||(29751618-29751725)
chr5 (169-229)||(31180773-31180833)
chr5 (172-261)||(15465034-15465125)
chr5 (179-229)||(14520796-14520846)
chr5 (171-229)||(43592797-43592855)
chr5 (184-248)||(36931856-36931920)
chr5 (171-248)||(16409076-16409154)
chr5 (172-248)||(9352807-9352884)
chr5 (185-261)||(24136393-24136470)
chr5 (184-261)||(37556137-37556214)
chr5 (171-261)||(37560946-37561036)
chr5 (179-229)||(12083658-12083708)
chr5 (179-261)||(28807083-28807165)
chr5 (184-229)||(11916457-11916502)
[»] chr1 (26 HSPs)
chr1 (169-277)||(9036000-9036108)
chr1 (172-275)||(44203218-44203321)
chr1 (172-250)||(21053540-21053618)
chr1 (170-250)||(20622742-20622823)
chr1 (172-261)||(39445993-39446082)
chr1 (172-250)||(9986785-9986864)
chr1 (171-248)||(13604094-13604172)
chr1 (171-261)||(41391096-41391186)
chr1 (171-261)||(24202250-24202342)
chr1 (171-247)||(44023376-44023452)
chr1 (172-277)||(40281958-40282064)
chr1 (172-261)||(51764990-51765081)
chr1 (171-261)||(19360911-19361003)
chr1 (179-229)||(13598967-13599017)
chr1 (179-261)||(25439406-25439488)
chr1 (179-261)||(25444599-25444681)
chr1 (171-240)||(1054513-1054582)
chr1 (184-229)||(21536125-21536170)
chr1 (172-229)||(24793666-24793723)
chr1 (185-229)||(37070334-37070378)
chr1 (172-261)||(19365768-19365859)
chr1 (171-229)||(13659840-13659898)
chr1 (184-229)||(3282273-3282318)
chr1 (188-229)||(16124197-16124238)
chr1 (179-248)||(26644381-26644450)
chr1 (184-229)||(41398764-41398809)
[»] scaffold0674 (1 HSPs)
scaffold0674 (171-275)||(4207-4311)
[»] scaffold0137 (1 HSPs)
scaffold0137 (171-277)||(5858-5964)
[»] scaffold0006 (4 HSPs)
scaffold0006 (171-248)||(132751-132829)
scaffold0006 (179-229)||(6252-6302)
scaffold0006 (179-229)||(3060-3110)
scaffold0006 (171-229)||(149601-149659)
[»] scaffold0355 (1 HSPs)
scaffold0355 (172-249)||(3337-3414)
[»] scaffold0491 (2 HSPs)
scaffold0491 (171-261)||(9217-9309)
scaffold0491 (172-261)||(11662-11753)
[»] scaffold1455 (1 HSPs)
scaffold1455 (172-247)||(1709-1784)
[»] scaffold0464 (1 HSPs)
scaffold0464 (172-247)||(870-945)
[»] scaffold0188 (1 HSPs)
scaffold0188 (172-261)||(17431-17522)
[»] scaffold0135 (1 HSPs)
scaffold0135 (172-241)||(34554-34623)
[»] scaffold0140 (1 HSPs)
scaffold0140 (167-277)||(7906-8017)
[»] scaffold0665 (1 HSPs)
scaffold0665 (172-229)||(8216-8273)
[»] scaffold0510 (1 HSPs)
scaffold0510 (184-248)||(1096-1160)
[»] scaffold0098 (1 HSPs)
scaffold0098 (172-231)||(45744-45804)
[»] scaffold0087 (2 HSPs)
scaffold0087 (179-231)||(36332-36384)
scaffold0087 (184-248)||(43447-43511)
[»] scaffold1769 (1 HSPs)
scaffold1769 (26-72)||(165-211)
[»] scaffold0060 (1 HSPs)
scaffold0060 (26-72)||(69096-69142)
[»] scaffold0028 (1 HSPs)
scaffold0028 (168-246)||(148440-148518)
[»] scaffold0286 (1 HSPs)
scaffold0286 (185-250)||(21953-22018)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 8348621 - 8348781
Alignment:
Q  11 cacagaccactggcaatttcttcgaattctcctatgctatagcgccggtatcaacattgaaatnnnnnnntacgaattaaaagtgtaggtacagcaactg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  8348621 cacagaccactggcaatttcttcgaattctcctatgctatagcgccggtatcaacattgaaataaaaaaatacgaattaaaagtgtaggtacagcaactg 8348720  T
Q  111 aaagccagaagacaacaaagttctggttgatgccaaggaacaggtttattacagataaata 171  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  8348721 aaagccagaagacaacaaagttctggttgatgctaaggaacaagtttattacagataaata 8348781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 32060888 - 32060785
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  32060888 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgc 32060789  T
Q  272 aggg 275  Q
    ||||    
T  32060788 aggg 32060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 6592922 - 6592818
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  6592922 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 6592823  T
Q  271 caggg 275  Q
    |||||    
T  6592822 caggg 6592818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 6595137 - 6595034
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||    
T  6595137 tgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgc 6595038  T
Q  272 aggg 275  Q
    ||||    
T  6595037 aggg 6595034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 18392780 - 18392675
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||| |||||   | ||||||||| |||||||||    
T  18392780 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgc 18392681  T
Q  272 agggtg 277  Q
    ||||||    
T  18392680 agggtg 18392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 8409869 - 8410003
Alignment:
Q  11 cacagaccactggcaatttcttcgaattctcc----tatgctatagcgccggtatcaacattgaaatnnnnnnntacgaattaaaagtgtaggtacagca 106  Q
    ||||||||||||||||||||||| ||||||||    ||||||||||| ||||||||||||||||||        ||| ||||||||||||||||||||||    
T  8409869 cacagaccactggcaatttcttcaaattctcctatgtatgctatagcaccggtatcaacattgaaagaaaaacatacaaattaaaagtgtaggtacagca 8409968  T
Q  107 actgaaagccagaagacaacaaagttctggttgat 141  Q
    |  ||||||||||||||||||| ||| ||||||||    
T  8409969 agagaaagccagaagacaacaatgttttggttgat 8410003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 1562587 - 1562509
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1562587 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg 1562509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 20343500 - 20343579
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcgg 251  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||  |||||||| |||||||||    
T  20343500 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcgg 20343579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 21640424 - 21640345
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  21640424 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 21640345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 24789426 - 24789505
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 24789505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 12397493 - 12397415
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||| |||||||||||| ||||||||| |||||||    
T  12397493 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttc 12397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 31109069 - 31109147
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||  |||||| | |||||||    
T  31109069 atgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc 31109147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 43504708 - 43504630
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 43504630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 2058604 - 2058515
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||  | |||||||||    
T  2058604 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttgaggtgccgtgag 2058515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 4873721 - 4873644
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  4873721 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 4873644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 12406857 - 12406780
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  12406857 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 12406780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 18390563 - 18390506
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 228  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  18390563 atgttgagattgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 20357028 - 20357105
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  20357028 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 20357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 21646630 - 21646552
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||||||| |||||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgag 21646552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 47264254 - 47264190
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||||||| ||||||||| || ||||||||||||||||||||  |||||||| ||||||    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattt 47264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 39730933 - 39731024
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 39731024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 21983859 - 21983809
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  21983859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 2479947 - 2479883
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||||||| ||| |||||||| ||||| ||||||||||||||  |||||||| ||||||    
T  2479947 cttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattt 2479883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 44847632 - 44847696
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||||||| ||  |||||||| ||||||||||||||||||||  |||||||| ||||||    
T  44847632 cttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 48408398 - 48408489
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  || |||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 48408489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 80005 - 79955
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||  |||||||||||| ||||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 24023818 - 24023896
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||  ||||||||||||||  ||||||||||| ||||||||||||||||| ||  |||||| | |||||||    
T  24023818 atgttgatattagcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttc 24023896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 1532897 - 1532954
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgac 241  Q
    ||||||||||||||  ||||||||||| ||||||||||||||| ||||  ||||||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgac 1532954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 21811751 - 21811828
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    ||||||||||||||  ||||||||||| | ||||||| ||||||||||  |||||||| |||| |  |||||||||||    
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatctgagatgccgtgag 21811828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 21989518 - 21989473
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||    
T  21989518 cttcaaatttgtggtttggaagaacagagaaatcgtgacaagattt 21989473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 18409400 - 18409322
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||| | |||||||||||||   ||||||||||| |||||||| |||||| ||||  |||||||| ||||||    
T  18409400 atgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattt 18409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 18414275 - 18414198
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||| | |||||||||| |||  ||||||||||| ||||||||||||||| ||||  |||||| | ||||||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattt 18414198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgatttt 230  Q
    ||||||||||| | |||||||||||| ||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 5137874 - 5137978
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5137874 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 5137973  T
Q  271 caggg 275  Q
    |||||    
T  5137974 caggg 5137978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 5135649 - 5135752
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5135649 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgc 5135748  T
Q  272 aggg 275  Q
    ||||    
T  5135749 aggg 5135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 8395190 - 8395294
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  8395190 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 8395289  T
Q  271 caggg 275  Q
    |||||    
T  8395290 caggg 8395294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 8392982 - 8393085
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  8392982 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgc 8393081  T
Q  272 aggg 275  Q
    ||||    
T  8393082 aggg 8393085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 7124488 - 7124592
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  7124488 atgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 7124587  T
Q  271 caggg 275  Q
    |||||    
T  7124588 caggg 7124592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 7122267 - 7122370
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||    
T  7122267 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgc 7122366  T
Q  272 aggg 275  Q
    ||||    
T  7122367 aggg 7122370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 31495902 - 31495811
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 31495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 9228685 - 9228763
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  9228685 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 9228763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 24742577 - 24742499
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  24742577 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 24742499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 3814605 - 3814528
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  3814605 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 3814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 9223899 - 9223976
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  9223899 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 9223976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 51521050 - 51520973
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  51521050 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 51520973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 56141510 - 56141587
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||    
T  56141510 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 56141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 18856310 - 18856234
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  18856310 atgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18856234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 18860521 - 18860446
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  18860521 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 13992881 - 13992800
Alignment:
Q  170 tatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| ||||||||    
T  13992881 tatgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcg 13992800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 5143859 - 5143807
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5143859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 8689044 - 8689096
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8689044 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 8689096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 5733247 - 5733169
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  || |||||||| |||||| |||||||||||||  |||||||| ||||||||    
T  5733247 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcg 5733169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 45347324 - 45347406
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||| ||||||||||||||  ||||||||||  ||||||||||||||||||||  |||||||| |||||   |||||||||||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgattagagatgccgtgag 45347406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 228  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 5148294 - 5148243
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatttt 230  Q
    |||| |||||||||||||| ||||||||| || |||||||||||||||||||    
T  5148294 attggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgatttt 5148243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 5268699 - 5268750
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatttt 230  Q
    |||| |||||||||||||| |||||||||||| |||||||||||| ||||||    
T  5268699 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 28467977 - 28468068
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  ||||| || |||||| | |||||||||||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgag 28468068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 6742896 - 6742946
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  6742896 attggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 16622774 - 16622824
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| ||| |||||||||| |||||||||||| ||||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 29761227 - 29761182
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  29761227 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 54867795 - 54867745
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| ||||||||| || ||| ||||||||||||||    
T  54867795 attggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 31985127 - 31985204
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||| | |||||||||||||   || |||||||| ||||||||||||||| ||||  |||||||| ||||||    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 31985204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 36314716 - 36314761
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| || |||||| || ||||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 36328925 - 36328970
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| || |||||| || ||||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 34166665 - 34166769
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34166665 atgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 34166764  T
Q  271 caggg 275  Q
    |||||    
T  34166765 caggg 34166769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 13150857 - 13150952
Alignment:
Q  180 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgcaggg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13150857 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggg 13150952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 34151828 - 34151931
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  34151828 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttgc 34151927  T
Q  272 aggg 275  Q
    ||||    
T  34151928 aggg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 34164444 - 34164547
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  34164444 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttgc 34164543  T
Q  272 aggg 275  Q
    ||||    
T  34164544 aggg 34164547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 6136547 - 6136444
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||||||    
T  6136547 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcggatgccgtgagctagggttgc 6136448  T
Q  272 aggg 275  Q
    ||||    
T  6136447 aggg 6136444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 33342688 - 33342585
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  33342688 tgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcggatgccgtgagctagggttgc 33342589  T
Q  272 aggg 275  Q
    ||||    
T  33342588 aggg 33342585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 25420797 - 25420900
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||  | |||||| ||||||||||||||||||| |||||||||    
T  25420797 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcggatgccgtgagctagggttgc 25420896  T
Q  272 aggg 275  Q
    ||||    
T  25420897 aggg 25420900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 16579101 - 16578996
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||| || |||||    
T  16579101 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 16579003  T
Q  271 cagggtg 277  Q
    |||||||    
T  16579002 cagggtg 16578996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 16616279 - 16616384
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||| || |||||    
T  16616279 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 16616377  T
Q  271 cagggtg 277  Q
    |||||||    
T  16616378 cagggtg 16616384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 16554453 - 16554533
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcgg 251  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  16554453 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgg 16554533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 16631009 - 16631089
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcgg 251  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  16631009 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgg 16631089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 6097986 - 6097895
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||  |||||||| |||||||| |||||||||||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 6097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 22010184 - 22010266
Alignment:
Q  167 aaatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  22010184 aaatatgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 22010266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 27647476 - 27647573
Alignment:
Q  180 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttagggttgcagggtg 277  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||  |||||||| ||||||| || ||||||||| || ||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagcta-ggttgcagggtg 27647573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 6026833 - 6026890
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 228  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  6026833 atgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgatt 6026890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 3073343 - 3073252
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| ||||||||||||||||  |||||||||||| |||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 3073252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 11857568 - 11857490
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  11857568 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 11857490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 14741925 - 14742003
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  14741925 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 14742003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 16652715 - 16652773
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  16652715 atgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 30125018 - 30125096
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  30125018 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 30125096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 5266653 - 5266596
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  5266653 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 14737085 - 14737142
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  14737085 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 411685 - 411745
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||||||||| ||||||||||||||||  |||||||| |||||||||||||||||| ||||    
T  411685 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttg 411745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23896944 - 23896880
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||||||| ||| ||||||||  |||||||||||||||||||  |||||||| ||||||    
T  23896944 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 23896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 6439083 - 6439008
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    |||||| |||| |||||||||| |||  ||||||||||  ||||||||||||||||||||  |||||||| |||||    
T  6439083 tgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgatt 6439008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 5016976 - 5017026
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||||    
T  5016976 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 26253589 - 26253659
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgac 241  Q
    |||||||||| ||||||||||||||||  || |||||||| ||||||||||||||| ||||  ||||||||    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgac 26253659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 31085953 - 31086003
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| || ||||||||| ||||||||||||||||||    
T  31085953 attggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 2172090 - 2172013
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||||||  ||||||||||| ||||||| |||| || ||||  |||||||| |||||||| |||||||||||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgag 2172013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 5344057 - 5343990
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    |||| |||||||||||||| |||| ||||||| ||||||||| |||||||| |  |||||||| ||||    
T  5344057 attggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 5674242 - 5674320
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||||||  ||||||||||| |||||||||||| || ||||  ||||||||  ||||| | |||||||||||    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgag 5674320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 5571757 - 5571806
Alignment:
Q  180 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||||||  |||| |||| || ||||||||||||||||||    
T  5571757 ttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacac 224  Q
    |||| |||||||||||||  ||||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 22709645 - 22709568
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||| | ||||||||||||||  ||||||||||| |||||| |||||||| ||||  | |||||| ||||||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattt 22709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 28155097 - 28155145
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgat 227  Q
    |||| ||||||||||||||  ||||||||||| | ||||||||||||||    
T  28155097 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 10058026 - 10058130
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10058026 atgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10058125  T
Q  271 caggg 275  Q
    |||||    
T  10058126 caggg 10058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 10060248 - 10060352
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10060248 atgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10060347  T
Q  271 caggg 275  Q
    |||||    
T  10060348 caggg 10060352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 10062470 - 10062574
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10062470 atgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10062569  T
Q  271 caggg 275  Q
    |||||    
T  10062570 caggg 10062574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 10064692 - 10064796
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10064692 atgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10064791  T
Q  271 caggg 275  Q
    |||||    
T  10064792 caggg 10064796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 10066914 - 10067018
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10066914 atgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10067013  T
Q  271 caggg 275  Q
    |||||    
T  10067014 caggg 10067018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 10055805 - 10055908
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10055805 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgc 10055904  T
Q  272 aggg 275  Q
    ||||    
T  10055905 aggg 10055908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 10208778 - 10208881
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10208778 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgc 10208877  T
Q  272 aggg 275  Q
    ||||    
T  10208878 aggg 10208881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 10210977 - 10211081
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  10210977 atgttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttaggatgccgtgagttagggttg 10211076  T
Q  271 caggg 275  Q
    |||||    
T  10211077 caggg 10211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 3617030 - 3617137
Alignment:
Q  168 aatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttaggg 267  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  3617030 aatatgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctaggg 3617129  T
Q  268 ttgcaggg 275  Q
    ||||||||    
T  3617130 ttgcaggg 3617137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 4599108 - 4599004
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| ||||||||    
T  4599108 atgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttg 4599009  T
Q  271 caggg 275  Q
    |||||    
T  4599008 caggg 4599004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 4601328 - 4601225
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||||||    
T  4601328 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgc 4601229  T
Q  272 aggg 275  Q
    ||||    
T  4601228 aggg 4601225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 6716085 - 6716190
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttagggttg 270  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||| || |||||    
T  6716085 tgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 6716183  T
Q  271 cagggtg 277  Q
    |||||||    
T  6716184 cagggtg 6716190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 54634710 - 54634789
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcgg 251  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  || ||||| |||||||||    
T  54634710 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcgg 54634789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 37726299 - 37726208
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||| | |||||||||||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgag 37726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 6718287 - 6718345
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  6718287 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 25637013 - 25637091
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  25637013 tgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcg 25637091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 28503318 - 28503396
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  28503318 atgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 28503396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 28501152 - 28501229
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  28501152 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 28501229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 45282585 - 45282642
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  45282585 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 800685 - 800776
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 800776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 22172661 - 22172740
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  22172661 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 22172740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 40372256 - 40372334
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  40372256 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 40372334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 23198531 - 23198439
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||| |||||||| |||||| | |||||||||||    
T  23198531 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag 23198439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 8478002 - 8477924
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||| ||||||||||||||  |||||||| ||||||||    
T  8478002 tgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcg 8477924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 7782714 - 7782633
Alignment:
Q  170 tatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||||| | ||||||||||||||  | ||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  7782714 tatgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 7782633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  181 tgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 27974446 - 27974493
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27974446 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 36029709 - 36029658
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatttt 230  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 36029658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 18657029 - 18656951
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  || |||||||| |||||| |||||||||||||  |||||||| ||||||||    
T  18657029 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcg 18656951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 21711818 - 21711768
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  21711818 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 23200730 - 23200652
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| ||||||    
T  23200730 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 23200652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 37408035 - 37408113
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||| | |||||||||||||| |||||||||||  ||||||||||||||||| ||  |||||||| ||||||    
T  37408035 atgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattt 37408113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 7167882 - 7167813
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgac 241  Q
    |||||| |||| |||||||||||||   ||||||||||| ||||||||||||||||||||  ||||||||    
T  7167882 tgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgac 7167813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 26928080 - 26928157
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| ||||||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 26928157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 27985971 - 27986017
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 39032025 - 39032075
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||| | |||||||||||| ||||||||||||||||||    
T  39032025 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 8738542 - 8738599
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||| |||| ||||||||||||||  ||||||||||| |||||||||||| |||||    
T  8738542 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 9090780 - 9090837
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||| |||| ||||||||||||||  ||||||||||| |||||||||||| |||||    
T  9090780 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 1306605 - 1306525
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||||||| | |||||||||| |||  ||||||||||| |||||||||||| || ||||  |||||||| ||||||||    
T  1306605 atgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcg 1306525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 32143928 - 32143868
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||||||||| | ||||||||||||||  || |||||||| ||||||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 40735015 - 40735063
Alignment:
Q  181 tgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||||||| ||||| ||||||  |||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgac 222  Q
    |||| |||||||||||||| |||||||||||| |||||||||||    
T  1730916 attggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 33386137 - 33386228
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||   | |||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 33386228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 40845279 - 40845220
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatttt 230  Q
    |||||||||| |||||||||||| ||  |||| ||||||| |||||||||||||||||||    
T  40845279 tgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 2672431 - 2672493
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    ||||||||||||||  ||||||||||| | ||||||| ||||||||||  |||||||| ||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 2676587 - 2676649
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    ||||||||||||||  ||||||||||| | ||||||| ||||||||||  |||||||| ||||    
T  2676587 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 16498636 - 16498694
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||| |||| |||||||||||||| |||||  ||||| |||||||||||| |||||    
T  16498636 atgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 27038658 - 27038608
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||| ||||||| |||||| ||||| ||||||||||||||||||    
T  27038658 attggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| ||||||||||| || |||||||||||| ||||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 40592252 - 40592302
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||| | |||||||||||| |||||    
T  40592252 attggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| ||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 27352097 - 27352158
Alignment:
Q  188 aaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||||||  | |||||||||  |||||||||||||||||||  |||||||| |||||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttc 27352158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 32476066 - 32475997
Alignment:
Q  177 agattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    |||||| |||||||||||||| |||| ||||||| | ||||||| |||||||| |  |||||||| ||||    
T  32476066 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 32480924 - 32480855
Alignment:
Q  177 agattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    |||||| |||||||||||||| |||| ||||||| | ||||||| |||||||| |  |||||||| ||||    
T  32480924 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 42575910 - 42575806
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||    
T  42575910 atgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagttagggttg 42575811  T
Q  271 caggg 275  Q
    |||||    
T  42575810 caggg 42575806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 15290143 - 15290246
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || | ||| |||||||||||||||||||||||||||||    
T  15290143 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgc 15290242  T
Q  272 aggg 275  Q
    ||||    
T  15290243 aggg 15290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 15470512 - 15470615
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || | ||| |||||||||||||||||||||||||||||    
T  15470512 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgc 15470611  T
Q  272 aggg 275  Q
    ||||    
T  15470612 aggg 15470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 3439087 - 3439193
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttagggtt 269  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||  |||||||| ||||||| || ||||||||| || ||||    
T  3439087 atgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagcta-ggtt 3439185  T
Q  270 gcagggtg 277  Q
    ||||||||    
T  3439186 gcagggtg 3439193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 4759534 - 4759612
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  4759534 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcg 4759612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 33037286 - 33037365
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  33037286 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 33037365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 18870020 - 18870098
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  18870020 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 18870098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 36980014 - 36979936
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  36980014 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 36979936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 10683739 - 10683816
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  10683739 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 10683816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 25689561 - 25689618
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  25689561 tgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 30656282 - 30656205
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  30656282 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 30656205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 2627318 - 2627397
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||| | ||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 2627397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 7412939 - 7412876
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 7412876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 39784325 - 39784400
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  39784325 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 39784400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 18852622 - 18852704
Alignment:
Q  167 aaatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||| |||||| |||| ||||||||||||||  ||||||||||| |||||||||| |||||||||  |||||||| |||||||    
T  18852622 aaatctgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttc 18852704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 7289427 - 7289504
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||| ||||||||||||||  |||||||| |||||||    
T  7289427 tgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttc 7289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 25327664 - 25327723
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  25327664 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttg 25327723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 5701959 - 5702009
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  5701959 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 6311928 - 6311858
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||| ||||||||||||||  ||||||||||| |||||| |||||||||||||  |||||||| |||||||    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttc 6311858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 10688617 - 10688675
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  10688617 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 1261428 - 1261505
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||||| |||||||||||  ||||||| ||||||| ||||  |||||||| |||||||| |||||||||||    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 1261505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 26288517 - 26288426
Alignment:
Q  172 tgttgaga-ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||| ||| ||||||||||||||  ||||||||||| ||||||||||||||| ||||  ||||||||  ||||| | |||||||||||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgag 26288426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 26301774 - 26301683
Alignment:
Q  172 tgttgaga-ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||| ||| ||||||||||||||  ||||||||||| ||||||||||||||| ||||  ||||||||  ||||| | |||||||||||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgag 26301683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 26313768 - 26313677
Alignment:
Q  172 tgttgaga-ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||| ||| ||||||||||||||  ||||||||||| ||||||||||||||| ||||  ||||||||  ||||| | |||||||||||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgag 26313677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 31042908 - 31042987
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||| | ||||||||||||||  |||||||| || ||||||||||||||| ||||  |||||||| ||||||||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcg 31042987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 4456620 - 4456575
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 35745985 - 35745904
Alignment:
Q  166 taaatatgttgaga-ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    |||||||||||| | ||| |||||||||||||| |||||||||||| | ||||||| | |||||| |  |||||||| ||||    
T  35745985 taaatatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 35745904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 23799105 - 23799149
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||||    
T  23799105 ttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 3185 - 3082
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||    
T  3185 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgc 3086  T
Q  272 aggg 275  Q
    ||||    
T  3085 aggg 3082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 12647967 - 12647864
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||    
T  12647967 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgc 12647868  T
Q  272 aggg 275  Q
    ||||    
T  12647867 aggg 12647864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 44310466 - 44310548
Alignment:
Q  167 aaatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  44310466 aaatatgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 32247352 - 32247263
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||  |||||||||||    
T  32247352 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgag 32247263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 6266274 - 6266365
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| ||||||||||||||||  |||||||||| |||||||||||||||| ||||| |||||||| | |||||| |||||||||||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgag 6266365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 9295862 - 9295939
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  9295862 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 9295939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 30832919 - 30833012
Alignment:
Q  170 tatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||||| | ||||||||||||||  ||||||||||| |||||||||||| || ||||| |||||||| |||||||| |||||||||||    
T  30832919 tatgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgag 30833012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 39811477 - 39811554
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  39811477 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 39811554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 14292125 - 14292051
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||    
T  14292125 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 14292051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 11098387 - 11098464
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  || ||||| |||||||    
T  11098387 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttc 11098464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 32289147 - 32289239
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||    
T  32289147 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 32289239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 4484923 - 4484832
Alignment:
Q  172 tgttgagattgt-cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||||  |||||||||||    
T  4484923 tgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgag 4484832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 25410253 - 25410175
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 25410175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 36757425 - 36757478
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttga 232  Q
    |||| |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  36757425 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttga 36757478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 40739460 - 40739380
Alignment:
Q  169 atatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||||| | ||||||||||||||  |||||||||||  |||||||||||||| ||||  |||||||| ||||||    
T  40739460 atatgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattt 40739380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 28258682 - 28258729
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  28258682 cttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||| | |||||||||||| ||||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||| | |||||||||||| ||||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 33528105 - 33528155
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||| ||||    
T  33528105 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 39483493 - 39483443
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 20522838 - 20522794
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgaca 223  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||    
T  20522838 attggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 3492377 - 3492286
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  || |||||||| ||||| ||||||||| ||||  |||||||| |||||| | |||||||||||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 3492286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| ||||||| || ||| |||||||||||| ||||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 10592844 - 10592948
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||| || ||||||    
T  10592844 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccgggtgccgtgagata-ggttgc 10592942  T
Q  272 agggtg 277  Q
    ||||||    
T  10592943 agggtg 10592948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 16546215 - 16546321
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||| |||||   | ||||||||| ||||||||    
T  16546215 atgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttg 16546314  T
Q  271 cagggtg 277  Q
    |||||||    
T  16546315 cagggtg 16546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 25077701 - 25077809
Alignment:
Q  167 aaatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagg 266  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||   | ||||||||| ||||    
T  25077701 aaatatgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagg 25077800  T
Q  267 gttgcaggg 275  Q
    |||| ||||    
T  25077801 gttgtaggg 25077809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 25135670 - 25135778
Alignment:
Q  167 aaatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagg 266  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||   | ||||||||| ||||    
T  25135670 aaatatgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagg 25135769  T
Q  267 gttgcaggg 275  Q
    |||| ||||    
T  25135770 gttgtaggg 25135778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 40379678 - 40379783
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||| |||||   | ||||||||| |||||||||    
T  40379678 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgc 40379777  T
Q  272 agggtg 277  Q
    ||||||    
T  40379778 agggtg 40379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 16543992 - 16544099
Alignment:
Q  170 tatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggtt 269  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||| |||||   | ||| ||||| |||||||    
T  16543992 tatgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgctgtgagctagggtt 16544091  T
Q  270 gcagggtg 277  Q
     |||||||    
T  16544092 acagggtg 16544099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 22536852 - 22536747
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttagggttg 270  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||  |||||||| ||||||| || ||||||||| || |||||    
T  22536852 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagcta-ggttg 22536754  T
Q  271 cagggtg 277  Q
    |||||||    
T  22536753 cagggtg 22536747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 40381888 - 40381994
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||| ||||||||||  |||||||| |||||   | ||||||||| ||||||||    
T  40381888 atgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttg 40381987  T
Q  271 cagggtg 277  Q
    |||||||    
T  40381988 cagggtg 40381994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 9789811 - 9789718
Alignment:
Q  170 tatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  9789811 tatgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 9789718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 29752391 - 29752284
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgagttagggt 268  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||| | ||||||||| || |||    
T  29752391 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagcta-ggt 29752293  T
Q  269 tgcagggtg 277  Q
    |||||||||    
T  29752292 tgcagggtg 29752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 15045279 - 15045190
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||||| |||| |||||||||||| | |||||||||||| ||||||||||||||||||||  |||||||| ||||||  |||||||||||    
T  15045279 tgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgag 15045190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 1456635 - 1456715
Alignment:
Q  169 atatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  1456635 atatgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 1456715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 18442234 - 18442142
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgag 261  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||  |||||||||||    
T  18442234 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgag 18442142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 26177465 - 26177557
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  26177465 atgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 26177557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 29722151 - 29722231
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  29722151 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 29722231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 29719965 - 29720044
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 29720044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 30631948 - 30631870
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||||    
T  30631948 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 30631870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 27450409 - 27450332
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  27450409 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 27450332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 16407636 - 16407732
Alignment:
Q  167 aaatatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||| |||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||| |||||||| |||||| | |||||||||||    
T  16407636 aaatctgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag 16407732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 26170370 - 26170448
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| |||  ||||||||||||||||||||||||||| |||| ||||||||| |||||| | |||||||||||    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag 26170448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 27445567 - 27445489
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    ||||||| |||| ||||||||||||||  | ||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  27445567 atgttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 27445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 29402550 - 29402627
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||| | |||||||    
T  29402550 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc 29402627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 43599318 - 43599241
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||   ||||||| |||||||    
T  43599318 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttc 43599241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 43604810 - 43604733
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||   ||||||| |||||||    
T  43604810 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttc 43604733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 43610302 - 43610225
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||   ||||||| |||||||    
T  43610302 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttc 43610225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 29751725 - 29751618
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgagttagggt 268  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||||||| || ||||  |||  ||| |||||||| | ||||||||| || |||    
T  29751725 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagcta-ggt 29751627  T
Q  269 tgcagggtg 277  Q
    |||||||||    
T  29751626 tgcagggtg 29751618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 31180833 - 31180773
Alignment:
Q  169 atatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  31180833 atatgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 15465125 - 15465034
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  || |||||||| ||||||||||||||| |||| ||||||||| |||||| | |||||||||||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag 15465034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 14520846 - 14520796
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  14520846 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 43592855 - 43592797
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  43592855 atgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 36931856 - 36931920
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||  |||||| | ||||||    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattt 36931920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 16409076 - 16409154
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||| | ||||||||||||||  || |||||||| ||||||||||||||| ||||  |||||||| ||||||    
T  16409076 atgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 16409154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 9352807 - 9352884
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||| | |||||||||||||| ||| |||||||| ||||||||||| ||||| ||  |||||||| ||||||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattt 9352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 24136470 - 24136393
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||||||  ||||||||||  ||||||||||||||| ||||  |||||||| | |||||| |||||||||||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgag 24136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 37556137 - 37556214
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    ||||||||||||||  ||||||||||| | |||||||||||||||| |  |||||||| |||| |  |||||||||||    
T  37556137 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatctgagatgccgtgag 37556214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 37560946 - 37561036
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgat-atcgtgacgcgatttcggatgccgtgag 261  Q
    |||||||  ||| ||||||||||||||  ||||||||||| | ||||||||||||| |||||| |||||||| |||| |  |||||||||||    
T  37560946 atgttgaatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacga-tttgataatcgtgacacgatctgagatgccgtgag 37561036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 12083658 - 12083708
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| ||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 28807083 - 28807165
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||| |||||||||| |||  ||||||||||| | ||||||| ||||||||||  |||||||| |||| |  |||||||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatctgagatgccgtgag 28807165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 11916457 - 11916502
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| ||| |||||||| ||||||||||||| ||||    
T  11916457 cttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 9036000 - 9036108
Alignment:
Q  169 atatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgagttaggg 267  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||| || ||    
T  9036000 atatgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-gg 9036098  T
Q  268 ttgcagggtg 277  Q
    ||||||||||    
T  9036099 ttgcagggtg 9036108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 44203218 - 44203321
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttgc 271  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| |||||   | ||||||||| |||||||||    
T  44203218 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgc 44203317  T
Q  272 aggg 275  Q
    ||||    
T  44203318 aggg 44203321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 21053540 - 21053618
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  21053540 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 21053618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 20622823 - 20622742
Alignment:
Q  170 tatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  20622823 tatgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcg 20622742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 39446082 - 39445993
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||  |||||||||||    
T  39446082 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgag 39445993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 9986785 - 9986864
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||| ||||| || ||||||||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcg 9986864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 13604094 - 13604172
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||| | ||||||    
T  13604094 atgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattt 13604172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 41391186 - 41391096
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||||||  ||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| ||||||  |||||||||||    
T  41391186 atgttgattttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgag 41391096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 24202250 - 24202342
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  24202250 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 24202342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 44023376 - 44023452
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  44023376 atgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 44023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 40281958 - 40282064
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgagttagggtt 269  Q
    |||||||||| ||||||||||||||||  |||||||| |||||||||||||||||| ||||  |||||||| |||||| | | ||||||||| || ||||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagcta-ggtt 40282056  T
Q  270 gcagggtg 277  Q
    ||||||||    
T  40282057 gcagggtg 40282064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 51764990 - 51765081
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||| ||||||||||  ||||||||||| ||||||||||||||| ||||| |||||||| |||||||| |||||||||||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgag 51765081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 19360911 - 19361003
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||| | ||||||||||||||  || |||||||| ||||||||||||||| |||| ||||||||| |||||| | |||||||||||    
T  19360911 atgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag 19361003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 13599017 - 13598967
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  13599017 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 25439406 - 25439488
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||| ||||||||||||||  ||||||||||| | |||||||||||||||| |  |||||||| ||||||  |||||||||||    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgag 25439488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 25444599 - 25444681
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgag 261  Q
    |||| ||||||||||||||  ||||||||||| | |||||||||||||||| |  |||||||| ||||||  |||||||||||    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgag 25444681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 1054513 - 1054582
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtga 240  Q
    ||||||| |||| ||||||||||||||  ||||||||||| ||||||||| ||||||||||  |||||||    
T  1054513 atgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtga 1054582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 21536125 - 21536170
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 24793666 - 24793723
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  24793666 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 37070378 - 37070334
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 19365768 - 19365859
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  || |||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag 19365859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 13659898 - 13659840
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||| |||| |||||||||||||| |||||  ||||| |||||||||||| |||||    
T  13659898 atgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 3282318 - 3282273
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||||||| | ||||||||||  |||||||||||||||||    
T  3282318 cttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  188 aaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||||||| |||||||||||| |||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 26644381 - 26644450
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||| ||| |||||||||| |||||||||||| | |||||||| |||||||||  ||||| || ||||||    
T  26644381 attggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 41398809 - 41398764
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||    
T  41398809 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

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Target: scaffold0674 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 4311 - 4207
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||| ||||||  | ||||||||| ||||||||    
T  4311 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttaggtgccgtgagctagggttg 4212  T
Q  271 caggg 275  Q
    |||||    
T  4211 caggg 4207  T

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Target: scaffold0137 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 5858 - 5964
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcggatgccgtgagttagggttg 270  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||   ||||||| |||||   | ||||||||| ||||||||    
T  5858 atgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattggaggtgccgtgagctagggttg 5957  T
Q  271 cagggtg 277  Q
    |||||||    
T  5958 cagggtg 5964  T

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Target: scaffold0006 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 132751 - 132829
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||| | ||||||    
T  132751 atgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattt 132829  T

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Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 6302 - 6252
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  6302 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

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Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 3110 - 3060
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||| |||||||||||||| |||||||||||| |||||| |||||||||||    
T  3110 attggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

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Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 149659 - 149601
Alignment:
Q  171 atgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    ||||||| |||| |||||||||||||| |||||  ||||| |||||||||||| |||||    
T  149659 atgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

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Target: scaffold0355 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 3337 - 3414
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc 249  Q
    |||||| |||| ||||||||||||||  |||||||| || ||||||||||||||||||||| |||||||| |||||||    
T  3337 tgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttc 3414  T

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Target: scaffold0491 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 9309 - 9217
Alignment:
Q  171 atgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    ||||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  9309 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 9217  T

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Target: scaffold0491; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 11753 - 11662
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttc-ggatgccgtgag 261  Q
    |||||||||| | ||||||| ||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||||  |||||||||||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgag 11662  T

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Target: scaffold1455 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 1709 - 1784
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  1709 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

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Target: scaffold0464 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 945 - 870
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatt 247  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  945 tgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 870  T

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Target: scaffold0188 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 17431 - 17522
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgag 261  Q
    |||||||||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||  |||||||| |||||||| |||||||||||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag 17522  T

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Target: scaffold0135 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 34554 - 34623
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgac 241  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||||  ||||||||    
T  34554 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgac 34623  T

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Target: scaffold0140 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 277
Target Start/End: Original strand, 7906 - 8017
Alignment:
Q  167 aaatatgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg-gatgccgtgagtta 264  Q
    |||| |||||||||| | ||||||||||||||  || |||||||| ||||||||||||||| ||||  |||||||| |||||| | |||||||||||||     
T  7906 aaatgtgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagtt- 8004  T
Q  265 gggttgcagggtg 277  Q
    || ||||||||||    
T  8005 ggtttgcagggtg 8017  T

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Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 8273 - 8216
Alignment:
Q  172 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattt 229  Q
    |||||| |||| ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  8273 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

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Target: scaffold0510 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 1096 - 1160
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||||||| ||| ||||||||  |||||||||||||||||||  |||||||| ||||||    
T  1096 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 1160  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 45804 - 45744
Alignment:
Q  172 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||||||||| | |||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 36332 - 36384
Alignment:
Q  179 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttg 231  Q
    |||| |||||||||||||| |||||||||||| |||||| ||| |||||||||    
T  36332 attggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

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Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 43447 - 43511
Alignment:
Q  184 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgattt 248  Q
    |||||||||| ||| ||||||||| || ||||||||||||||||| ||  |||||||| ||||||    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattt 43511  T

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Target: scaffold1769 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1769
Description:

Target: scaffold1769; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 211 - 165
Alignment:
Q  26 atttcttcgaattctcctatgctatagcgccggtatcaacattgaaa 72  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||    
T  211 atttcttcaaattctactatgttatagcaccggtatcaacattgaaa 165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 69142 - 69096
Alignment:
Q  26 atttcttcgaattctcctatgctatagcgccggtatcaacattgaaa 72  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||    
T  69142 atttcttcaaattctactatgttatagcaccggtatcaacattgaaa 69096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 148440 - 148518
Alignment:
Q  168 aatatgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgat 246  Q
    |||||||||  |||| ||||||||| |||| |||||||||||| | ||||||| |||||||| |  |||||||| ||||    
T  148440 aatatgttggaattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 21953 - 22018
Alignment:
Q  185 ttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttgatatcgtgacgcgatttcg 250  Q
    |||||||||||||  ||||||||||| ||||||| |||| || ||||  |||||||| ||||||||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcg 22018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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