View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18914_high_11 (Length: 232)
Name: NF18914_high_11
Description: NF18914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18914_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 48417479 - 48417676
Alignment:
| Q |
19 |
ataatcattctagttaaatataagaattttaatgcatgaaaaatagggacgcagcattacttacattttggtgttcgggtggaaaaagctttagacattc |
118 |
Q |
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| T |
48417479 |
ataatcattctagttaaatataagaattttaatgcatgaaaaatagggacgcagcattacttacattttggtgttcgggtggaaaaagctttagacattc |
48417578 |
T |
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| Q |
119 |
aacaataacataactgccattaaaatttttcatcaatgcaacagtgatatgcttcatggtatacacaactacatattgcatgaacagacacttaatat |
216 |
Q |
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| T |
48417579 |
aacaataacataactgccattaaaatttttcatcaatgcaacagtgatatgcttcatggtatacacaactacatattgcatgaacagacacttaatat |
48417676 |
T |
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