View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18914_high_7 (Length: 468)
Name: NF18914_high_7
Description: NF18914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18914_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 1 - 462
Target Start/End: Original strand, 46061939 - 46062400
Alignment:
| Q |
1 |
gctcttagcaagttttaagtagaggttgccatatctgaaataccacaaaaaccaacatcagataattaatatcaaacaacttaactagggcctcacnnnn |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46061939 |
gctcttagcaagttttaagtagaggttgccatatctgaaataccacaaaaaccaacatcagataattaatatcaaacaacttaactagggcctcacaaaa |
46062038 |
T |
|
| Q |
101 |
nnnccaattcaaattataaaactcaagcaaaccagaacaaatcaagaaatgtgatatcattcaaaccttgcagtagaacccttaagcgtattaactttct |
200 |
Q |
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| T |
46062039 |
aaaccaattcaaattataaaactcaagcaaaccagaacaaatcaagaaatgtgatatcattcaaaccttgcagtagaacccttaagcgtattaactttct |
46062138 |
T |
|
| Q |
201 |
ctacaagtctggaaaagacaatcttcttctcatcgtcgttggcactcacaaactccttcaccaagccatctagagatggtactataccagcctaaaacat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46062139 |
ctacaagtctggaaaagacaatcttcttctcatcgtcgttggcactcacaaactccttcaccaagccatctagagatggtactataccagcctaaaacat |
46062238 |
T |
|
| Q |
301 |
gaataattggttcactcagctatcaagattcaagtatattattctagtctcttatgatgctaaacatatattttaaactaactttagaagtaagttgacc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46062239 |
gaataattggttcactcagctatcaagattcaagtatattattctagtctcttatgatgctaaacatatattttaaactaactttagaagtaagttgacc |
46062338 |
T |
|
| Q |
401 |
ctgttcatcacggttagtgccacatctcgcattaatgaaaaatacaaaatcgttcatctcac |
462 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
46062339 |
ctgttcatcacggttagtgccacatctcgcattaatgaaaaatacaaaatcgtccatatcac |
46062400 |
T |
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