View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18915_high_4 (Length: 430)

Name: NF18915_high_4
Description: NF18915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18915_high_4
NF18915_high_4
[»] scaffold0014 (2 HSPs)
scaffold0014 (53-362)||(32608-32917)
scaffold0014 (392-430)||(32947-32985)
[»] chr3 (8 HSPs)
chr3 (83-362)||(19766049-19766328)
chr3 (206-357)||(17681936-17682083)
chr3 (51-94)||(11394009-11394052)
chr3 (86-144)||(31687908-31687966)
chr3 (392-430)||(17682114-17682152)
chr3 (392-430)||(19766356-19766394)
chr3 (54-94)||(52130783-52130823)
chr3 (60-94)||(46233983-46234017)
[»] chr4 (8 HSPs)
chr4 (60-144)||(26720237-26720321)
chr4 (52-94)||(41810163-41810205)
chr4 (51-94)||(32651290-32651333)
chr4 (51-94)||(38467731-38467774)
chr4 (94-144)||(14586815-14586865)
chr4 (87-186)||(10195692-10195791)
chr4 (51-80)||(48969137-48969166)
chr4 (62-94)||(3649873-3649905)
[»] chr2 (5 HSPs)
chr2 (94-225)||(32277084-32277216)
chr2 (55-94)||(7161811-7161850)
chr2 (51-90)||(997811-997850)
chr2 (59-94)||(4453777-4453812)
chr2 (59-94)||(9208569-9208604)
[»] scaffold0003 (2 HSPs)
scaffold0003 (55-144)||(43150-43239)
scaffold0003 (83-144)||(36966-37027)
[»] chr6 (4 HSPs)
chr6 (55-144)||(27444122-27444211)
chr6 (46-94)||(31444757-31444805)
chr6 (83-129)||(33054136-33054182)
chr6 (54-90)||(33054187-33054223)
[»] scaffold0152 (1 HSPs)
scaffold0152 (83-144)||(10230-10291)
[»] scaffold0005 (1 HSPs)
scaffold0005 (94-144)||(230509-230559)
[»] chr8 (2 HSPs)
chr8 (60-94)||(35348991-35349025)
chr8 (60-94)||(44663703-44663737)
[»] chr7 (1 HSPs)
chr7 (55-90)||(16262706-16262741)
[»] chr1 (3 HSPs)
chr1 (51-94)||(17726024-17726066)
chr1 (60-95)||(31771393-31771428)
chr1 (59-94)||(32440669-32440704)
[»] scaffold0352 (1 HSPs)
scaffold0352 (160-207)||(16740-16788)


Alignment Details
Target: scaffold0014 (Bit Score: 282; Significance: 1e-158; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 53 - 362
Target Start/End: Original strand, 32608 - 32917
Alignment:
Q  53 taatctaatctaacttatttctaatcctagttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatctatgtcatta 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32608 taatctaatctaacttatttctaatcctagttaacactccaaaccctaatcctacttttttaggcgccaaacaatccagcccgttggatctatgtcatta 32707  T
Q  153 aacaagcttaacatatcagcccttgatcaaatcttaatgctggcttgcacacatcccatacataattcaaattcaacgtgtatcatcttccaacgcgttt 252  Q
     |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32708 gacaagcttaacatatcagcccttgatcaaatcttaacgctgtcttgcacacatcccatacataattcaaattcaacgtgtatcatcttccaaagcgttt 32807  T
Q  253 cattttccaaagtattcattttcaattcattcattctcttattccaaccatccatgccactttatctgttcccgtttcatctccaagattcatgatcaac 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  32808 cattttccaaagtattcattttcaattcattcattctcttattccaaccatccatgccactttatctgttcccttttcatcttcaagattcatgatcaac 32907  T
Q  353 cttttgtcat 362  Q
    ||||||||||    
T  32908 cttttgtcat 32917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 32947 - 32985
Alignment:
Q  392 gccaatgaaccataaccatacatgaagaaaatttcaatc 430  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32947 gccaatgaaccataaccatacatgaagaaaatttcaatc 32985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 83 - 362
Target Start/End: Original strand, 19766049 - 19766328
Alignment:
Q  83 ttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatctatgtcattaaacaagcttaacatatcagcccttgatcaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19766049 ttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatctatgtcattagacaagcttaacatatcagcccttgatcaa 19766148  T
Q  183 atcttaatgctggcttgcacacatcccatacataattcaaattcaacgtgtatcatcttccaacgcgtttcattttccaaagtattcattttcaattcat 282  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19766149 atcttaatgctggcttgcacacgtcccatacataattcaaattcaacgtctatcatcttccaacgcgtttcattttccaaagtattcattttcaattcat 19766248  T
Q  283 tcattctcttattccaaccatccatgccactttatctgttcccgtttcatctccaagattcatgatcaaccttttgtcat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  19766249 tcattctcttattccaaccatccatgccactttatctgttcccttttcatctccaagattcatgatcaaacttttgtcat 19766328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 206 - 357
Target Start/End: Original strand, 17681936 - 17682083
Alignment:
Q  206 tcccatacataattcaaattcaacgtgtatcatcttccaacgcgtttcattttccaaagtattcattttcaattcattcattctcttattccaaccatcc 305  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    |||||||||||||||||||||||||    
T  17681936 tcccatacataattcaaattcaaggtgtatcatcttccaacgcgtttcactttccaaagtattcattttca----attcattctcttattccaaccatcc 17682031  T
Q  306 atgccactttatctgttcccgtttcatctccaagattcatgatcaacctttt 357  Q
    || ||| || || ||||||| |||||||||  ||||||||| ||||||||||    
T  17682032 ataccaattcatttgttcccttttcatctcttagattcatgttcaacctttt 17682083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 11394009 - 11394052
Alignment:
Q  51 tctaatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11394009 tctaatctaatctaacttatttctaatcctagttaacactccaa 11394052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 31687908 - 31687966
Alignment:
Q  86 acactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  31687908 acactccaaaccctaattctacttttttaggcgccaaacaatcctagcccttggatcta 31687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 17682114 - 17682152
Alignment:
Q  392 gccaatgaaccataaccatacatgaagaaaatttcaatc 430  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17682114 gccaatgaaccataaccatacatgaagaaaatttcaatc 17682152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 19766356 - 19766394
Alignment:
Q  392 gccaatgaaccataaccatacatgaagaaaatttcaatc 430  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19766356 gccaatgaaccataaccatacatgaagaaaatttcaatc 19766394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 52130783 - 52130823
Alignment:
Q  54 aatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  52130783 aatctagtctaacttatttctaatcctaggtaacactccaa 52130823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 46234017 - 46233983
Alignment:
Q  60 atctaacttatttctaatcctagttaacactccaa 94  Q
    |||||||||||| ||||||||||||||||||||||    
T  46234017 atctaacttattcctaatcctagttaacactccaa 46233983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 8e-31; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 26720237 - 26720321
Alignment:
Q  60 atctaacttatttctaatcctagttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  26720237 atctaacttattcctaatcctagttaacactccaaaccctaatcctacttttttaggcgccaaacaatcctagcccttggatcta 26720321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 41810163 - 41810205
Alignment:
Q  52 ctaatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41810163 ctaatctaatctaacttatttctaatcctagttaacactccaa 41810205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 32651333 - 32651290
Alignment:
Q  51 tctaatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  32651333 tctaatctaatctaacttattcctaatcctagttaacactccaa 32651290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 38467774 - 38467731
Alignment:
Q  51 tctaatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  38467774 tctaatctaatctaacttatttataatcctagttaacactccaa 38467731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 14586865 - 14586815
Alignment:
Q  94 aaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    |||||||| |||||||||||||||||||||||||||  ||| |||||||||    
T  14586865 aaccctaaacctacttttttaggcgccaaacaatcctagcccttggatcta 14586815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 10195692 - 10195791
Alignment:
Q  87 cactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatctatgtcattaaacaagcttaacatatcagcccttgatcaaatct 186  Q
    ||||| ||||||||| |||| || |||||| |||||| ||||||||  ||||||||  ||||| ||  |  | ||||||||||| |||||||||||||||    
T  10195692 cactctaaaccctaaacctaattatttaggtgccaaagaatccaggatgttggatcgctgtcactaggcgcggttaacatatcatcccttgatcaaatct 10195791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 48969166 - 48969137
Alignment:
Q  51 tctaatctaatctaacttatttctaatcct 80  Q
    ||||||||||||||||||||||||||||||    
T  48969166 tctaatctaatctaacttatttctaatcct 48969137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 3649873 - 3649905
Alignment:
Q  62 ctaacttatttctaatcctagttaacactccaa 94  Q
    |||||||||| ||||||||||||||||||||||    
T  3649873 ctaacttattcctaatcctagttaacactccaa 3649905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 94 - 225
Target Start/End: Original strand, 32277084 - 32277216
Alignment:
Q  94 aaccctaatcctacttttttaggcgccaaacaatccaggccgttggatctatgtcattaaacaagcttaacatatcagcccttgatcaaatcttaatgct 193  Q
    ||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||  |   |||||||||||||||||||||||||| ||| ||||    
T  32277084 aaccctaatcctaattattttggcgccaaacaatccagaccgttggatctatgtcattaggcgcacttaacatatcagcccttgatcaaattttagtgct 32277183  T
Q  194 ggcttgcacacatccca-tacataattcaaatt 225  Q
      |||||||||||| || |||||||||||||||    
T  32277184 ttcttgcacacatcacattacataattcaaatt 32277216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 7161811 - 7161850
Alignment:
Q  55 atctaatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7161811 atctaatctaacttatttctaatcctagttaacactccaa 7161850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 997811 - 997850
Alignment:
Q  51 tctaatctaatctaacttatttctaatcctagttaacact 90  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  997811 tctaatctaatctaacttattcctaatcctagttaacact 997850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 94
Target Start/End: Original strand, 4453777 - 4453812
Alignment:
Q  59 aatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||| ||||||||||||||||||||||    
T  4453777 aatctaacttattcctaatcctagttaacactccaa 4453812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 94
Target Start/End: Original strand, 9208569 - 9208604
Alignment:
Q  59 aatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9208569 aatctaacttattcctaatcctagttaacactccaa 9208604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 43239 - 43150
Alignment:
Q  55 atctaatctaacttatttctaatcctagttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  43239 atctaatctaacttattcctaatcgtagttaacactccaaaccctaattctacttttttaggcgccaaacaatcctagcccttggatcta 43150  T

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Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 37027 - 36966
Alignment:
Q  83 ttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    |||||||| |||| |||||| || |||||||||||||||||||||||  ||| |||||||||    
T  37027 ttaacacttcaaatcctaattcttcttttttaggcgccaaacaatcctagcccttggatcta 36966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 27444122 - 27444211
Alignment:
Q  55 atctaatctaacttatttctaatcctagttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  27444122 atctaatctaacttattcctaatcgtagttaacactccaaaccctaattctacttttttaggcgccaaacaatcctagcccttggatcta 27444211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 31444757 - 31444805
Alignment:
Q  46 ttatttctaatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  31444757 ttatatctaatctaatctaacttattcctaatcctagttaacactccaa 31444805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 33054182 - 33054136
Alignment:
Q  83 ttaacactccaaaccctaatcctacttttttaggcgccaaacaatcc 129  Q
    ||||||||  ||||||||| |||||||||||||||||||| ||||||    
T  33054182 ttaacacttaaaaccctaaacctacttttttaggcgccaatcaatcc 33054136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 33054223 - 33054187
Alignment:
Q  54 aatctaatctaacttatttctaatcctagttaacact 90  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  33054223 aatctaatctaacttattcctaatcctaattaacact 33054187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 10230 - 10291
Alignment:
Q  83 ttaacactccaaaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  10230 ttaacactccaaaccctaattctacttttttaggcgccaaacaatcctagcccttggatcta 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 230509 - 230559
Alignment:
Q  94 aaccctaatcctacttttttaggcgccaaacaatccaggccgttggatcta 144  Q
    |||||||| |||||||||||||||||||||||||||  ||| |||||||||    
T  230509 aaccctaaacctacttttttaggcgccaaacaatcctagcccttggatcta 230559  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Original strand, 35348991 - 35349025
Alignment:
Q  60 atctaacttatttctaatcctagttaacactccaa 94  Q
    |||||||||||||||||||||||||||||||||||    
T  35348991 atctaacttatttctaatcctagttaacactccaa 35349025  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 44663737 - 44663703
Alignment:
Q  60 atctaacttatttctaatcctagttaacactccaa 94  Q
    |||||||||||| ||||||||||||||||||||||    
T  44663737 atctaacttattcctaatcctagttaacactccaa 44663703  T

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Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 16262741 - 16262706
Alignment:
Q  55 atctaatctaacttatttctaatcctagttaacact 90  Q
    ||||||||||||||||| ||||||||||||||||||    
T  16262741 atctaatctaacttattcctaatcctagttaacact 16262706  T

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Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 17726024 - 17726066
Alignment:
Q  51 tctaatctaatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  17726024 tctaatctaatctaa-ttattcctaatcctagttaacactccaa 17726066  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 31771428 - 31771393
Alignment:
Q  60 atctaacttatttctaatcctagttaacactccaaa 95  Q
    |||||||||||| |||||||||||||||||||||||    
T  31771428 atctaacttattcctaatcctagttaacactccaaa 31771393  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 32440704 - 32440669
Alignment:
Q  59 aatctaacttatttctaatcctagttaacactccaa 94  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32440704 aatctaacttattcctaatcctagttaacactccaa 32440669  T

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Target: scaffold0352 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 16788 - 16740
Alignment:
Q  160 ttaacatatcagccctt-gatcaaatcttaatgctggcttgcacacatc 207  Q
    |||||||||||||| || ||||| |||||||||||||||| ||||||||    
T  16788 ttaacatatcagccatttgatcatatcttaatgctggcttacacacatc 16740  T

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